Prupe.7G096200_v2.0.a1

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000131
Physical Location & Seq
Forward (+)
12815498 .. 12818055
2558 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G096200.1

Sequence Viewer

Length: 1677 bp
ATGACCCGGCAATTTGGACCAGAGGTTCGTCCTCCTCCTGACTCAAAGAGGTTGGGTGCTACGACAATAATTAAAAAAGGTCCATGTCAATGGGCGCGACTATTTCCGTGGAAGGGGCGACACAAGGCGTCGTCTTCTCCAAAGGAAACTTCATCAACGACGGATGTTCGAAGTGCATCTACAAATGCTGGACCAGCAGTGGAGAACCCAAACCCGCGTGATCAAGCCGCGCTTCCATCTGAGGGTTTAGCGTCGCGAGAAACGCCGTCATCTGGGCTGCCAAAGGAGATTTCAATGACAACACGAGGTCCTCCAAGTCCAAGAGAATCAACCAATGCTGCTGGACCAGCAGCTGCTGCAGCAGTGGAGAACCCAAACCCGCGCGATCAAGTGGCGATTCTAATTGAGGGTAAGATGCGAGGAACGCCGCCGTTTTCGCCAGATTGTGCTATTTACCAAGTCCCCGAGAGATTTCGCAATGGAAATGAACAACACTACAAACCCCGGGTGGTCCCAATCGGACCCTATCACTCCTACCACGGAAGTTTCCCACAAATGCAAAGCTATAAGCTCAAATACGTAGAGGCCTTCACCAGCCGAAACGGGCTCGGATTCATAGACCAATGCCTTGGCTTTGTGAGAAGTTGCGAGATAATAGCCAGGAGATATTATGTCGTGCCCATTGACCTAAGCAGTGATGACTTCGCCGAGCTGATGCTGGTGGACGCAATTTTTGTCTTGGAGCTTATACTCAGGTATCAGTTTGCCCAATATATAGACGACGGCGATCGAATATATCATAAGCCGCGGATGATAGCAGATGTTTTCCTTGATGTCGTGTTGTTGATCGAGAACCAAATTCCCTTCTTTCTTCTTGAGGGTTTGTATGACCTTGTTGATAGCCGCTACAAAGGAAATCTCAGCTTCTTTGTGGATCTTACGCATGAGTTCTTGAAGGATTACGTCAAAATCGATGAGTTTCCTGCTGATCATGCACCTGTGCCTCAAGTTAACCATGGAGTGAAGCATTTTGTTGATTTTATACGATACTACTACTTGCCCCCGTCTCCTGTGGAGGGTGAAAATCACGATAGGCCTAGGGAGGGTGAAAATCCCAATAGTCATCCTAGGGTTGAAGAAATCCCACCAAGCGTGACAGTGCTAGACGATGCCGGAGTTCAGTTTGTGACAAGAAGAACAACCTTCTCACTTGACATACAATTCAACAACGGAAGTCTCATAATTCCGAATTTTAGAGTTGACGATTGGACGGAAACTCTCTTCAGGAACCTCATCGCCTTTGAACAGTGCCACGATCACCAAATGAAGTACATTTCGCAATTTATATTCCTCATGGGGGGCATGATCAATACTTCAAAGGACGTGGACTTGCTCATTGAACATGGAATTATATCTAGTATGCTGGGGAGTAACGATGATCTGTCCGCTCTATTTAACCGCATTGGCCAAGGGGTTGCGGTCAATGCGCAAACTTATCGTTATCTTATCCTTTCCCAAAGACTCAATGCCTACTGCAAGGCTCCTTGGCACATATGGAAAGCAATTCTGAACCGGGACTATTTCAACACTCCATGGAAACTTGCTTCTACTATTGCTGCAATTATACTCCTTGTGCTCACACTCATCCAAACCATATGCTCTATCTTATCCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

559

Amino Acids

63.03

Weight (kDa)

6.22

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1488
AccBSI CCGCTC 1 cut(s) 1448
AccII CGCG 7 cut(s) 97, 217, 230, 256, 382, 384, 808
AclWI GGATC 1 cut(s) 942
AcoI YGGCCR 1 cut(s) 1465
AcsI RAATTY 2 cut(s) 858, 1249
AcuI CTGAAG 1 cut(s) 1267
AcyI GRCGYC 1 cut(s) 128
AfaI GTAC 1 cut(s) 1331
AfiI CCNNNNNNNGG 6 cut(s) 113, 242, 272, 1076, 1103, 1357
AgsI TTSAA 8 cut(s) 294, 955, 1136, 1225, 1304, 1377, 1400, 1585
AjiI CACGTC 1 cut(s) 1384
AjnI CCWGG 1 cut(s) 659
AjuI GAANNNNNNNTTGG 4 cut(s) 133, 165, 274, 306
AloI GAACNNNNNNTCC 2 cut(s) 9, 41
AluBI AGCT 6 cut(s) 353, 564, 571, 712, 745, 924
AluI AGCT 6 cut(s) 353, 564, 571, 712, 745, 924
Alw21I GWGCWC 1 cut(s) 1638
Alw26I GTCTC 2 cut(s) 1071, 1241
AlwI GGATC 1 cut(s) 942
AlwNI CAGNNNCTG 2 cut(s) 353, 356
Ama87I CYCGRG 2 cut(s) 464, 504
AoxI GGCC 3 cut(s) 585, 1094, 1465
ApeKI GCWGC 7 cut(s) 277, 338, 350, 353, 356, 359, 1616
ApoI RAATTY 2 cut(s) 858, 1249
ArsI GACNNNNNNTTYG 4 cut(s) 9, 41, 716, 748
AspA2I CCTAGG 2 cut(s) 1097, 1127
AspLEI GCGC 4 cut(s) 97, 232, 384, 1489
AspS9I GGNCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
AsuC2I CCSGG 4 cut(s) 7, 505, 506, 1574
AsuHPI GGTGA 4 cut(s) 583, 1091, 1118, 1310
AsuII TTCGAA 1 cut(s) 169
AvaI CYCGRG 2 cut(s) 464, 504
AvaII GGWCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
AvrII CCTAGG 2 cut(s) 1097, 1127
BaeGI GKGCMC 1 cut(s) 681
BaeI ACNNNNGTAYC 2 cut(s) 740, 773
BalI TGGCCA 1 cut(s) 1467
BanII GRGCYC 1 cut(s) 609
BarI GAAGNNNNNNTAC 2 cut(s) 163, 195
BauI CACGAG 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 126
Bbv12I GWGCWC 1 cut(s) 1638
BbvI GCAGC 7 cut(s) 264, 325, 340, 343, 362, 371, 1603
BccI CCATC 1 cut(s) 244
BceAI ACGGC 3 cut(s) 250, 415, 799
BcgI CGANNNNNNTGC 2 cut(s) 1478, 1512
BciT130I CCWGG 1 cut(s) 661
BclI TGATCA 3 cut(s) 220, 988, 1365
BcnI CCSGG 4 cut(s) 7, 505, 506, 1574
BcoDI GTCTC 2 cut(s) 1071, 1241
BfaI CTAG 4 cut(s) 1098, 1128, 1163, 1416
BfmI CTRYAG 1 cut(s) 357
BlnI CCTAGG 2 cut(s) 1097, 1127
Bme1390I CCNGG 5 cut(s) 7, 505, 506, 661, 1574
Bme18I GGWCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
BmeT110I CYCGRG 2 cut(s) 464, 504
BmgBI CACGTC 1 cut(s) 1384
BmgT120I GGNCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
BmiI GGNNCC 4 cut(s) 513, 523, 1289, 1542
BmrFI CCNGG 5 cut(s) 7, 505, 506, 661, 1574
BmsI GCATC 4 cut(s) 185, 405, 705, 1159
BpiI GAAGAC 1 cut(s) 126
Bpu10I CCTNAGC 1 cut(s) 689
Bpu14I TTCGAA 1 cut(s) 169
BpuEI CTTGAG 2 cut(s) 896, 990
BpuMI CCSGG 4 cut(s) 7, 505, 506, 1574
Bsa29I ATCGAT 1 cut(s) 972
BsaAI YACGTR 1 cut(s) 580
BsaHI GRCGYC 1 cut(s) 128
Bsc4I CCNNNNNNNGG 6 cut(s) 113, 242, 272, 1076, 1103, 1357
Bse3DI GCAATG 1 cut(s) 484
BseBI CCWGG 1 cut(s) 661
BseCI ATCGAT 1 cut(s) 972
BseGI GGATG 4 cut(s) 169, 816, 1123, 1644
BseLI CCNNNNNNNGG 6 cut(s) 113, 242, 272, 1076, 1103, 1357
BseMI GCAATG 1 cut(s) 484
BseMII CTCAG 3 cut(s) 231, 766, 934
BseRI GAGGAG 1 cut(s) 24
BseSI GKGCMC 1 cut(s) 681
BseXI GCAGC 7 cut(s) 264, 325, 340, 343, 362, 371, 1603
BseYI CCCAGC 1 cut(s) 1423
Bsh1236I CGCG 7 cut(s) 97, 217, 230, 256, 382, 384, 808
Bsh1285I CGRYCG 1 cut(s) 790
BshFI GGCC 3 cut(s) 587, 1096, 1467
BshVI ATCGAT 1 cut(s) 972
BsiEI CGRYCG 1 cut(s) 790
BsiHKAI GWGCWC 1 cut(s) 1638
BsiHKCI CYCGRG 2 cut(s) 464, 504
BsiSI CCGG 4 cut(s) 7, 505, 1173, 1573
BslFI GGGAC 3 cut(s) 446, 497, 1589
BslI CCNNNNNNNGG 6 cut(s) 113, 242, 272, 1076, 1103, 1357
BsmAI GTCTC 2 cut(s) 1071, 1241
BsmBI CGTCTC 1 cut(s) 1071
BsmFI GGGAC 3 cut(s) 446, 497, 1589
BsnI GGCC 3 cut(s) 587, 1096, 1467
BsoBI CYCGRG 2 cut(s) 464, 504
Bsp119I TTCGAA 1 cut(s) 169
Bsp1286I GDGCHC 3 cut(s) 609, 681, 1638
Bsp143I GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
Bsp19I CCATGG 2 cut(s) 1015, 1592
Bsp68I TCGCGA 1 cut(s) 256
BspANI GGCC 3 cut(s) 587, 1096, 1467
BspCNI CTCAG 3 cut(s) 232, 765, 933
BspDI ATCGAT 1 cut(s) 972
BspFNI CGCG 7 cut(s) 97, 217, 230, 256, 382, 384, 808
BspLI GGNNCC 4 cut(s) 513, 523, 1289, 1542
BspMAI CTGCAG 1 cut(s) 361
BspPI GGATC 1 cut(s) 942
BspT104I TTCGAA 1 cut(s) 169
BsrBI CCGCTC 1 cut(s) 1448
BsrDI GCAATG 1 cut(s) 484
BssMI GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
BssNI GRCGYC 1 cut(s) 128
BssSI CACGAG 1 cut(s) 303
BssT1I CCWWGG 7 cut(s) 628, 1015, 1097, 1127, 1468, 1544, 1592
Bst2BI CACGAG 1 cut(s) 303
Bst2UI CCWGG 1 cut(s) 661
Bst4CI ACNGT 2 cut(s) 1159, 1308
Bst6I CTCTTC 1 cut(s) 1286
BstACI GRCGYC 1 cut(s) 128
BstAPI GCANNNNNTGC 1 cut(s) 356
BstBAI YACGTR 1 cut(s) 580
BstBI TTCGAA 1 cut(s) 169
BstDEI CTNAG 4 cut(s) 240, 689, 752, 920
BstDSI CCRYGG 5 cut(s) 107, 538, 806, 1015, 1592
BstF5I GGATG 4 cut(s) 169, 816, 1123, 1644
BstFNI CGCG 7 cut(s) 97, 217, 230, 256, 382, 384, 808
BstHHI GCGC 4 cut(s) 97, 232, 384, 1489
BstKTI GATC 9 cut(s) 223, 388, 790, 849, 937, 991, 1318, 1368, 1441
BstMAI GTCTC 2 cut(s) 1071, 1241
BstMBI GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
BstMCI CGRYCG 1 cut(s) 790
BstMWI GCNNNNNNNGC 9 cut(s) 194, 262, 347, 356, 359, 424, 436, 992, 1484
BstNI CCWGG 1 cut(s) 661
BstSCI CCNGG 5 cut(s) 5, 503, 504, 659, 1572
BstSFI CTRYAG 1 cut(s) 357
BstSLI GKGCMC 1 cut(s) 681
BstSNI TACGTA 1 cut(s) 580
BstUI CGCG 7 cut(s) 97, 217, 230, 256, 382, 384, 808
BstV1I GCAGC 7 cut(s) 264, 325, 340, 343, 362, 371, 1603
BstV2I GAAGAC 1 cut(s) 126
BstX2I RGATCY 1 cut(s) 934
BstXI CCANNNNNNTGG 2 cut(s) 90, 629
BstYI RGATCY 1 cut(s) 934
Bsu15I ATCGAT 1 cut(s) 972
BsuRI GGCC 3 cut(s) 587, 1096, 1467
BsuTUI ATCGAT 1 cut(s) 972
BtgI CCRYGG 5 cut(s) 107, 538, 806, 1015, 1592
BtgZI GCGATG 1 cut(s) 1279
BtrI CACGTC 1 cut(s) 1384
BtsCI GGATG 4 cut(s) 169, 816, 1123, 1644
BtsI GCAGTG 3 cut(s) 204, 369, 700
BtsIMutI CAGTG 5 cut(s) 204, 369, 700, 1164, 1313
BtuMI TCGCGA 1 cut(s) 256
CaiI CAGNNNCTG 2 cut(s) 353, 356
CfoI GCGC 4 cut(s) 97, 232, 384, 1489
Cfr13I GGNCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
Cfr42I CCGCGG 1 cut(s) 809
Cfr9I CCCGGG 1 cut(s) 504
ClaI ATCGAT 1 cut(s) 972
CseI GACGC 3 cut(s) 117, 240, 734
Csp6I GTAC 1 cut(s) 1330
CspCI CAANNNNNGTGG 2 cut(s) 1365, 1400
CviAII CATG 8 cut(s) 84, 944, 992, 1016, 1354, 1363, 1403, 1593
CviQI GTAC 1 cut(s) 1330
DdeI CTNAG 4 cut(s) 240, 689, 752, 920
DpnI GATC 9 cut(s) 222, 387, 789, 848, 936, 990, 1317, 1367, 1440
DpnII GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
EaeI YGGCCR 1 cut(s) 1465
Eam1104I CTCTTC 1 cut(s) 1286
EarI CTCTTC 1 cut(s) 1286
Eco105I TACGTA 1 cut(s) 580
Eco130I CCWWGG 7 cut(s) 628, 1015, 1097, 1127, 1468, 1544, 1592
Eco147I AGGCCT 2 cut(s) 587, 1096
Eco24I GRGCYC 1 cut(s) 609
Eco47I GGWCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
Eco57I CTGAAG 1 cut(s) 1267
Eco88I CYCGRG 2 cut(s) 464, 504
EcoO109I RGGNCCY 1 cut(s) 308
EcoRII CCWGG 1 cut(s) 659
EcoT14I CCWWGG 7 cut(s) 628, 1015, 1097, 1127, 1468, 1544, 1592
EcoT38I GRGCYC 1 cut(s) 609
ErhI CCWWGG 7 cut(s) 628, 1015, 1097, 1127, 1468, 1544, 1592
Esp3I CGTCTC 1 cut(s) 1071
FaeI CATG 8 cut(s) 87, 947, 995, 1019, 1357, 1366, 1406, 1596
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FaqI GGGAC 3 cut(s) 446, 497, 1589
FatI CATG 8 cut(s) 83, 943, 991, 1015, 1353, 1362, 1402, 1592
FauI CCCGC 2 cut(s) 222, 387
FauNDI CATATG 2 cut(s) 1553, 1655
FbaI TGATCA 3 cut(s) 220, 988, 1365
FokI GGATG 4 cut(s) 176, 823, 1110, 1631
FriOI GRGCYC 1 cut(s) 609
FspBI CTAG 4 cut(s) 1098, 1128, 1163, 1416
FspI TGCGCA 1 cut(s) 1488
GlaI GCGC 4 cut(s) 96, 231, 383, 1488
GsaI CCCAGC 1 cut(s) 1427
HaeIII GGCC 3 cut(s) 587, 1096, 1467
HapII CCGG 4 cut(s) 7, 505, 1173, 1573
HgaI GACGC 3 cut(s) 117, 240, 734
HhaI GCGC 4 cut(s) 97, 232, 384, 1489
Hin1I GRCGYC 1 cut(s) 128
Hin1II CATG 8 cut(s) 87, 947, 995, 1019, 1357, 1366, 1406, 1596
Hin6I GCGC 4 cut(s) 95, 230, 382, 1487
HinP1I GCGC 4 cut(s) 95, 230, 382, 1487
HincII GTYRAC 2 cut(s) 1012, 1261
HindII GTYRAC 2 cut(s) 1012, 1261
HinfI GANTC 5 cut(s) 41, 326, 397, 612, 1521
HpaI GTTAAC 1 cut(s) 1012
HpaII CCGG 4 cut(s) 7, 505, 1173, 1573
HphI GGTGA 4 cut(s) 583, 1091, 1118, 1310
Hpy166II GTNNAC 4 cut(s) 724, 1012, 1261, 1387
Hpy188I TCNGA 5 cut(s) 241, 521, 611, 1248, 1569
Hpy188III TCNNGA 7 cut(s) 38, 255, 850, 875, 952, 1088, 1285
Hpy8I GTNNAC 4 cut(s) 724, 1012, 1261, 1387
Hpy99I CGWCG 4 cut(s) 133, 163, 256, 785
HpyAV CCTTC 5 cut(s) 106, 598, 874, 949, 1213
HpyCH4III ACNGT 2 cut(s) 1159, 1308
HpyCH4IV ACGT 3 cut(s) 579, 963, 1383
HpyCH4V TGCA 6 cut(s) 176, 359, 559, 995, 1536, 1619
HpyF10VI GCNNNNNNNGC 9 cut(s) 194, 262, 347, 356, 359, 424, 436, 992, 1484
HpyF3I CTNAG 4 cut(s) 240, 689, 752, 920
HpySE526I ACGT 3 cut(s) 579, 963, 1383
Hsp92I GRCGYC 1 cut(s) 128
Hsp92II CATG 8 cut(s) 87, 947, 995, 1019, 1357, 1366, 1406, 1596
HspAI GCGC 4 cut(s) 95, 230, 382, 1487
Ksp22I TGATCA 3 cut(s) 220, 988, 1365
KspAI GTTAAC 1 cut(s) 1012
KspI CCGCGG 1 cut(s) 809
Kzo9I GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
LmnI GCTCC 2 cut(s) 742, 1546
Lsp1109I GCAGC 7 cut(s) 264, 325, 340, 343, 362, 371, 1603
LweI GCATC 4 cut(s) 185, 405, 705, 1159
MaeI CTAG 4 cut(s) 1098, 1128, 1163, 1416
MaeII ACGT 3 cut(s) 579, 963, 1383
MaeIII GTNAC 3 cut(s) 1153, 1186, 1430
MalI GATC 9 cut(s) 222, 387, 789, 848, 936, 990, 1317, 1367, 1440
MbiI CCGCTC 1 cut(s) 1448
MboI GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
MboII GAAGA 5 cut(s) 126, 863, 1148, 1206, 1273
MflI RGATCY 1 cut(s) 934
MhlI GDGCHC 3 cut(s) 609, 681, 1638
MlsI TGGCCA 1 cut(s) 1467
MluNI TGGCCA 1 cut(s) 1467
MlyI GAGTC 2 cut(s) 35, 1515
Mox20I TGGCCA 1 cut(s) 1467
MscI TGGCCA 1 cut(s) 1467
MseI TTAA 3 cut(s) 72, 1011, 1455
MslI CAYNNNNRTG 1 cut(s) 88
Msp20I TGGCCA 1 cut(s) 1467
MspA1I CMGCKG 2 cut(s) 353, 808
MspI CCGG 4 cut(s) 7, 505, 1173, 1573
MspR9I CCNGG 5 cut(s) 7, 505, 506, 661, 1574
MvaI CCWGG 1 cut(s) 661
MvnI CGCG 7 cut(s) 97, 217, 230, 256, 382, 384, 808
MwoI GCNNNNNNNGC 9 cut(s) 194, 262, 347, 356, 359, 424, 436, 992, 1484
NciI CCSGG 4 cut(s) 7, 505, 506, 1574
NcoI CCATGG 2 cut(s) 1015, 1592
NdeI CATATG 2 cut(s) 1553, 1655
NdeII GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
NlaIII CATG 8 cut(s) 87, 947, 995, 1019, 1357, 1366, 1406, 1596
NlaIV GGNNCC 4 cut(s) 513, 523, 1289, 1542
NmeAIII GCCGAG 1 cut(s) 733
NmuCI GTSAC 2 cut(s) 1153, 1186
NruI TCGCGA 1 cut(s) 256
NsbI TGCGCA 1 cut(s) 1488
NspV TTCGAA 1 cut(s) 169
PceI AGGCCT 2 cut(s) 587, 1096
PcsI WCGNNNNNNNCGW 1 cut(s) 969
PfeI GAWTC 3 cut(s) 326, 397, 612
Ple19I CGATCG 1 cut(s) 790
PleI GAGTC 2 cut(s) 35, 1515
PpsI GAGTC 2 cut(s) 35, 1515
Ppu21I YACGTR 1 cut(s) 580
PpuMI RGGWCCY 1 cut(s) 308
Psp5II RGGWCCY 1 cut(s) 308
Psp6I CCWGG 1 cut(s) 659
PspFI CCCAGC 1 cut(s) 1423
PspGI CCWGG 1 cut(s) 659
PspN4I GGNNCC 4 cut(s) 513, 523, 1289, 1542
PspPI GGNCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
PspPPI RGGWCCY 1 cut(s) 308
PstI CTGCAG 1 cut(s) 361
PstNI CAGNNNCTG 2 cut(s) 353, 356
PsuI RGATCY 1 cut(s) 934
PvuI CGATCG 1 cut(s) 790
PvuII CAGCTG 1 cut(s) 353
RruI TCGCGA 1 cut(s) 256
RsaI GTAC 1 cut(s) 1331
RsaNI GTAC 1 cut(s) 1330
RseI CAYNNNNRTG 1 cut(s) 88
SacII CCGCGG 1 cut(s) 809
SaqAI TTAA 3 cut(s) 72, 1011, 1455
Sau3AI GATC 9 cut(s) 220, 385, 787, 846, 934, 988, 1315, 1365, 1438
Sau96I GGNCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
SchI GAGTC 2 cut(s) 35, 1515
ScrFI CCNGG 5 cut(s) 7, 505, 506, 661, 1574
SduI GDGCHC 3 cut(s) 609, 681, 1638
SfaNI GCATC 4 cut(s) 185, 405, 705, 1159
SfcI CTRYAG 1 cut(s) 357
Sfr303I CCGCGG 1 cut(s) 809
SfuI TTCGAA 1 cut(s) 169
SgrBI CCGCGG 1 cut(s) 809
SinI GGWCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
SmaI CCCGGG 1 cut(s) 506
SmiMI CAYNNNNRTG 1 cut(s) 88
SmlI CTYRAG 2 cut(s) 875, 1005
SmoI CTYRAG 2 cut(s) 875, 1005
SnaBI TACGTA 1 cut(s) 580
SseBI AGGCCT 2 cut(s) 587, 1096
SspMI CTAG 4 cut(s) 1098, 1128, 1163, 1416
StuI AGGCCT 2 cut(s) 587, 1096
StyD4I CCNGG 5 cut(s) 5, 503, 504, 659, 1572
StyI CCWWGG 7 cut(s) 628, 1015, 1097, 1127, 1468, 1544, 1592
TaaI ACNGT 2 cut(s) 1159, 1308
TaiI ACGT 3 cut(s) 582, 966, 1386
TaqI TCGA 4 cut(s) 169, 790, 849, 972
TatI WGTACW 1 cut(s) 1329
TauI GCSGC 4 cut(s) 230, 430, 808, 906
TfiI GAWTC 3 cut(s) 326, 397, 612
Tru1I TTAA 3 cut(s) 72, 1011, 1455
Tru9I TTAA 3 cut(s) 72, 1011, 1455
TscAI CASTG 5 cut(s) 204, 369, 700, 1164, 1313
TseFI GTSAC 2 cut(s) 1153, 1186
TseI GCWGC 7 cut(s) 277, 338, 350, 353, 356, 359, 1616
Tsp45I GTSAC 2 cut(s) 1153, 1186
TspDTI ATGAA 4 cut(s) 141, 501, 604, 1340
TspGWI ACGGA 5 cut(s) 96, 176, 555, 1245, 1286
TspMI CCCGGG 1 cut(s) 504
TspRI CASTG 5 cut(s) 204, 369, 700, 1164, 1313
VpaK11BI GGWCC 7 cut(s) 17, 80, 191, 308, 344, 511, 521
XapI RAATTY 2 cut(s) 858, 1249
XmaI CCCGGG 1 cut(s) 504
XmaJI CCTAGG 2 cut(s) 1097, 1127
XspI CTAG 4 cut(s) 1098, 1128, 1163, 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.