Rw3G018320

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000131
Physical Location & Seq
Reverse (-)
20328331 .. 20332380
4050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G018320.1

Sequence Viewer

Length: 1791 bp
ATGGAGCGACTTCGAGAGGCGCAGCCCAGGGTTTCGTATGGTGGCGGCAGCAACCTTGCAGTCCCTAGACTAGGCAGTGGCAGGATAGCGACAACGAGGGTATGGAGAGGCGGTGCGTCTGCAGGCTTCTTGTTCATCGATGTCATTTTTCAAGTGGATTACTTGACGGAACAGGTTGAGGAGGTTTTGCGACGCTTGAGGTCTGCAGCAACAACAGAGGCGGTTGTAGCTTTTGCGGTAGGAGTTTCTGAGATTGGGGGCGGCGGCCTGATCTTTGTTGTTCCAACACATATCAAAATGCTCAGTAGAAAATGTGCAACTGCGGACATCCGTCCTTCGGGAAGTGACTATGAAGCACAGAAGAAGAAGAAGATTGAACCAAAAGGCCCTTCTACAATTGTACTACTAAGAGCATCTCTAAAACGGTGGTGTTGTAGCTCAGCTACAGATCAGGTCGATGATAATGTGTCAAATTCAGCAGATAATGTTGCTAGGACTGCTGGACCAACATTGCCTGATCGGAGCCCGGGGGATCAAACAACAATGCTTAAACAAAATGTGAGTGATCCCATTGCAATTATAATAATGGATAGAATTACAAAAATGCCTAAATTTTCGCCCGACTGTTCTATCTATAAAGTCTCCGAGAGATTGTACAAAGGATACGAAGACTTCTACACACCTCGGGTGGTCTCAATTGGACCTTATCACTATCGCAACGGAGGAAGTTCGGAAGGAATGGAAGCCTATAAATTCAAATATCTGGAGGCATTTTTCAGTCGGAACAACTTGAACTTGGACCACTGTCTTGGAGTTGTAAGAAAGCTAGAAGGAGAAGCCAGGAGTTATTATGTTGAGCCAGTCAAACTAAATAGGGATGAATTTGCTCTAATGTTGCTGGTGGATGGAACTTTTCTTCTGGAGCTAATGCTTAGGCATTACTTTGCTGAATTTGTCGATGATTGTGATCGGATATATGGCAAGCCGAGAGTGATTCTGGATGTTTACCGCGACCTCATGTTGATTGAGAACCAAATTCCCTTCTTTGTTCTCCGGGCTTTGTATAAGGAATTGGATAGGAAGAACTGGAGAGACCAGCCATCTCTTGTCACTGTTACACATGAATTCTTCACGTATTTGGTGAACGTTGACAAGTTTCCTGGTCCCGAGGAAGTGAAGCATTTCGTTGATTTTATCCGATGGTACTACTTGCCCAAGTGTGACAGCAACAGTGACGTTGGGATTATCGATGACGTTCCAAGTGCAACAGCAATGGACGAGGCTGGAGTTAAGTTTAAGGGAGGGACAAAATCGATCACATTGCTTGACATGGAATTCACTAATGGCTCTCTGCGAATTCCGCATTTCATAGTAGATGATTGGACCGAGACTCTCTTCAGGAATCTCATCGCATTTGAGCAATGTCATGATCACAAAGTAAAGCACATCACACAGTATATGTTCCTCATGGGGTGTATGATCAGGACTCCAAAGGATGCAGATTTACTGGTTGATCGCGAAATTATATCTAGCAGGCTAGGGACTAGTGAAGATATTTCGACTATATTCAACAACATTAGCAACGGTGTGAGCTTGGGTGGTCCATTCTATTACTTCACTCTTTGTGAAAATCTGAATGCTTATTGCAAGAGCCCATGGCACAGATGGAAAGCAACTCTTAAGAGGGACTATTTCAACACTCCATGGAAACTGGTTTCTACAATTGCTGCATTTGTATTGCTTGTCCTCACTGTTATACAAGCAGTGTGCTCCATCATATCCGTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

596

Amino Acids

67.57

Weight (kDa)

7.14

Isoelectric Point (pI)

38.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 211 - 583 1.6e-107 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 581
AccII CGCG 2 cut(s) 1011, 1518
AciI CCGC 9 cut(s) 45, 111, 221, 236, 261, 264, 323, 1009, 1361
AclI AACGTT 1 cut(s) 1146
AclWI GGATC 2 cut(s) 540, 560
AcsI RAATTY 9 cut(s) 472, 611, 752, 881, 950, 1035, 1124, 1334, 1356
AcuI CTGAAG 1 cut(s) 1381
AfaI GTAC 3 cut(s) 402, 656, 1205
AfiI CCNNNNNNNGG 2 cut(s) 71, 337
AflII CTTAAG 1 cut(s) 1679
AgsI TTSAA 6 cut(s) 152, 377, 757, 793, 1570, 1696
AhlI ACTAGT 1 cut(s) 1544
AjnI CCWGG 3 cut(s) 26, 839, 1159
AjuI GAANNNNNNNTTGG 2 cut(s) 373, 405
AluBI AGCT 6 cut(s) 230, 438, 443, 826, 925, 1593
AluI AGCT 6 cut(s) 230, 438, 443, 826, 925, 1593
Alw21I GWGCWC 1 cut(s) 1772
Alw26I GTCTC 4 cut(s) 646, 697, 1086, 1382
AlwI GGATC 2 cut(s) 540, 560
Ama87I CYCGRG 3 cut(s) 526, 684, 1166
AoxI GGCC 2 cut(s) 265, 385
ApeKI GCWGC 4 cut(s) 22, 48, 206, 1727
ApoI RAATTY 9 cut(s) 472, 611, 752, 881, 950, 1035, 1124, 1334, 1356
Asp700I GAANNNNTTC 1 cut(s) 1181
AspLEI GCGC 1 cut(s) 22
AspS9I GGNCC 7 cut(s) 386, 503, 701, 799, 1163, 1383, 1601
AsuC2I CCSGG 3 cut(s) 527, 528, 1055
AsuHPI GGTGA 1 cut(s) 1153
AvaI CYCGRG 3 cut(s) 526, 684, 1166
AvaII GGWCC 6 cut(s) 503, 701, 799, 1163, 1383, 1601
BanII GRGCYC 2 cut(s) 527, 1655
BbsI GAAGAC 1 cut(s) 675
Bbv12I GWGCWC 1 cut(s) 1772
BbvI GCAGC 4 cut(s) 34, 60, 218, 1714
BccI CCATC 5 cut(s) 899, 1108, 1194, 1659, 1781
BcgI CGANNNNNNTGC 2 cut(s) 1303, 1337
BciT130I CCWGG 3 cut(s) 28, 841, 1161
BciVI GTATCC 1 cut(s) 656
BclI TGATCA 2 cut(s) 1429, 1479
BcnI CCSGG 3 cut(s) 527, 528, 1055
BcoDI GTCTC 4 cut(s) 646, 697, 1086, 1382
BcuI ACTAGT 1 cut(s) 1544
BfaI CTAG 7 cut(s) 66, 71, 492, 827, 1530, 1538, 1545
BfmI CTRYAG 3 cut(s) 120, 204, 444
BfrI CTTAAG 1 cut(s) 1679
BfuI GTATCC 1 cut(s) 656
BisI GCNGC 7 cut(s) 23, 46, 49, 207, 262, 265, 1728
BlpI GCTNAGC 1 cut(s) 439
BlsI GCNGC 7 cut(s) 24, 47, 50, 208, 263, 266, 1729
Bme1390I CCNGG 6 cut(s) 28, 527, 528, 841, 1055, 1161
Bme18I GGWCC 6 cut(s) 503, 701, 799, 1163, 1383, 1601
BmeT110I CYCGRG 3 cut(s) 526, 684, 1166
BmgT120I GGNCC 7 cut(s) 386, 503, 701, 799, 1163, 1383, 1601
BmiI GGNNCC 2 cut(s) 524, 1165
BmrFI CCNGG 6 cut(s) 28, 527, 528, 841, 1055, 1161
BmsI GCATC 2 cut(s) 422, 1486
BoxI GACNNNNGTC 2 cut(s) 330, 804
BpiI GAAGAC 1 cut(s) 675
BpmI CTGGAG 4 cut(s) 785, 941, 1108, 1305
Bpu10I CCTNAGC 1 cut(s) 932
Bpu1102I GCTNAGC 1 cut(s) 439
BpuEI CTTGAG 1 cut(s) 217
BpuMI CCSGG 3 cut(s) 527, 528, 1055
Bsa29I ATCGAT 3 cut(s) 138, 1248, 1313
BsaAI YACGTR 1 cut(s) 1134
BsaBI GATNNNNATC 1 cut(s) 966
BsaI GGTCTC 2 cut(s) 697, 1086
BsaJI CCNNGG 8 cut(s) 26, 27, 526, 527, 683, 1167, 1655, 1703
BsaXI ACNNNNNCTCC 2 cut(s) 97, 127
Bsc4I CCNNNNNNNGG 2 cut(s) 71, 337
Bse1I ACTGG 4 cut(s) 860, 1091, 1512, 1716
Bse3DI GCAATG 5 cut(s) 509, 570, 1278, 1319, 1427
Bse8I GATNNNNATC 1 cut(s) 966
BseBI CCWGG 3 cut(s) 28, 841, 1161
BseCI ATCGAT 3 cut(s) 138, 1248, 1313
BseDI CCNNGG 8 cut(s) 26, 27, 526, 527, 683, 1167, 1655, 1703
BseGI GGATG 5 cut(s) 327, 883, 910, 1006, 1501
BseJI GATNNNNATC 1 cut(s) 966
BseLI CCNNNNNNNGG 2 cut(s) 71, 337
BseMI GCAATG 5 cut(s) 509, 570, 1278, 1319, 1427
BseMII CTCAG 3 cut(s) 240, 316, 453
BseNI ACTGG 4 cut(s) 860, 1091, 1512, 1716
BseRI GAGGAG 1 cut(s) 194
BseXI GCAGC 4 cut(s) 34, 60, 218, 1714
Bsh1236I CGCG 2 cut(s) 1011, 1518
BshFI GGCC 2 cut(s) 267, 387
BshVI ATCGAT 3 cut(s) 138, 1248, 1313
BsiHKAI GWGCWC 1 cut(s) 1772
BsiHKCI CYCGRG 3 cut(s) 526, 684, 1166
BsiSI CCGG 2 cut(s) 527, 1054
BslFI GGGAC 5 cut(s) 47, 1149, 1318, 1555, 1700
BslI CCNNNNNNNGG 2 cut(s) 71, 337
BsmAI GTCTC 4 cut(s) 646, 697, 1086, 1382
BsmFI GGGAC 5 cut(s) 47, 1149, 1318, 1555, 1700
BsmI GAATGC 1 cut(s) 1642
BsnI GGCC 2 cut(s) 267, 387
Bso31I GGTCTC 2 cut(s) 697, 1086
BsoBI CYCGRG 3 cut(s) 526, 684, 1166
Bsp1286I GDGCHC 3 cut(s) 527, 1655, 1772
Bsp1407I TGTACA 1 cut(s) 654
Bsp1720I GCTNAGC 1 cut(s) 439
Bsp19I CCATGG 2 cut(s) 1655, 1703
Bsp68I TCGCGA 1 cut(s) 1518
BspACI CCGC 9 cut(s) 45, 111, 221, 236, 261, 264, 323, 1009, 1361
BspANI GGCC 2 cut(s) 267, 387
BspCNI CTCAG 3 cut(s) 241, 315, 452
BspDI ATCGAT 3 cut(s) 138, 1248, 1313
BspFNI CGCG 2 cut(s) 1011, 1518
BspHI TCATGA 1 cut(s) 1426
BspLI GGNNCC 2 cut(s) 524, 1165
BspMAI CTGCAG 2 cut(s) 124, 208
BspPI GGATC 2 cut(s) 540, 560
BspTI CTTAAG 1 cut(s) 1679
BspTNI GGTCTC 2 cut(s) 697, 1086
BsrDI GCAATG 5 cut(s) 509, 570, 1278, 1319, 1427
BsrGI TGTACA 1 cut(s) 654
BsrI ACTGG 4 cut(s) 860, 1091, 1512, 1716
BssECI CCNNGG 8 cut(s) 26, 27, 526, 527, 683, 1167, 1655, 1703
BssT1I CCWWGG 2 cut(s) 1655, 1703
Bst2UI CCWGG 3 cut(s) 28, 841, 1161
Bst4CI ACNGT 8 cut(s) 426, 626, 806, 1114, 1232, 1455, 1586, 1753
Bst6I CTCTTC 1 cut(s) 1400
BstAFI CTTAAG 1 cut(s) 1679
BstAUI TGTACA 1 cut(s) 654
BstBAI YACGTR 1 cut(s) 1134
BstC8I GCNNGC 3 cut(s) 124, 983, 1535
BstDEI CTNAG 5 cut(s) 249, 302, 407, 439, 932
BstDSI CCRYGG 2 cut(s) 1655, 1703
BstENI CCTNNNNNAGG 1 cut(s) 69
BstF5I GGATG 5 cut(s) 327, 883, 910, 1006, 1501
BstFNI CGCG 2 cut(s) 1011, 1518
BstHHI GCGC 1 cut(s) 22
BstMAI GTCTC 4 cut(s) 646, 697, 1086, 1382
BstMWI GCNNNNNNNGC 3 cut(s) 227, 497, 1360
BstNI CCWGG 3 cut(s) 28, 841, 1161
BstPAI GACNNNNGTC 2 cut(s) 330, 804
BstSCI CCNGG 6 cut(s) 26, 525, 526, 839, 1053, 1159
BstSFI CTRYAG 3 cut(s) 120, 204, 444
BstUI CGCG 2 cut(s) 1011, 1518
BstV1I GCAGC 4 cut(s) 34, 60, 218, 1714
BstV2I GAAGAC 1 cut(s) 675
BstXI CCANNNNNNTGG 1 cut(s) 809
Bsu15I ATCGAT 3 cut(s) 138, 1248, 1313
BsuI GTATCC 1 cut(s) 656
BsuRI GGCC 2 cut(s) 267, 387
BsuTUI ATCGAT 3 cut(s) 138, 1248, 1313
BtgI CCRYGG 2 cut(s) 1655, 1703
BtgZI GCGATG 1 cut(s) 1393
BtsCI GGATG 5 cut(s) 327, 883, 910, 1006, 1501
BtsI GCAGTG 2 cut(s) 82, 1770
BtsIMutI CAGTG 6 cut(s) 82, 802, 1110, 1237, 1749, 1770
BtuMI TCGCGA 1 cut(s) 1518
Cac8I GCNNGC 3 cut(s) 124, 983, 1535
CciI TCATGA 1 cut(s) 1426
CfoI GCGC 1 cut(s) 22
Cfr13I GGNCC 7 cut(s) 386, 503, 701, 799, 1163, 1383, 1601
Cfr9I CCCGGG 1 cut(s) 526
ClaI ATCGAT 3 cut(s) 138, 1248, 1313
CseI GACGC 2 cut(s) 105, 201
Csp6I GTAC 3 cut(s) 401, 655, 1204
CviAII CATG 7 cut(s) 1018, 1121, 1330, 1427, 1468, 1656, 1704
CviQI GTAC 3 cut(s) 401, 655, 1204
DdeI CTNAG 5 cut(s) 249, 302, 407, 439, 932
Eam1104I CTCTTC 1 cut(s) 1400
EarI CTCTTC 1 cut(s) 1400
Eco130I CCWWGG 2 cut(s) 1655, 1703
Eco24I GRGCYC 2 cut(s) 527, 1655
Eco31I GGTCTC 2 cut(s) 697, 1086
Eco47I GGWCC 6 cut(s) 503, 701, 799, 1163, 1383, 1601
Eco57I CTGAAG 1 cut(s) 1381
Eco88I CYCGRG 3 cut(s) 526, 684, 1166
EcoNI CCTNNNNNAGG 1 cut(s) 69
EcoO109I RGGNCCY 1 cut(s) 386
EcoRI GAATTC 3 cut(s) 1124, 1334, 1356
EcoRII CCWGG 3 cut(s) 26, 839, 1159
EcoT14I CCWWGG 2 cut(s) 1655, 1703
EcoT38I GRGCYC 2 cut(s) 527, 1655
ErhI CCWWGG 2 cut(s) 1655, 1703
FaeI CATG 7 cut(s) 1021, 1124, 1333, 1430, 1471, 1659, 1707
FalI AAGNNNNNCTT 2 cut(s) 1662, 1694
FaqI GGGAC 5 cut(s) 47, 1149, 1318, 1555, 1700
FatI CATG 7 cut(s) 1017, 1120, 1329, 1426, 1467, 1655, 1703
FbaI TGATCA 2 cut(s) 1429, 1479
Fnu4HI GCNGC 7 cut(s) 23, 46, 49, 207, 262, 265, 1728
FokI GGATG 5 cut(s) 314, 890, 917, 1013, 1508
FriOI GRGCYC 2 cut(s) 527, 1655
Fsp4HI GCNGC 7 cut(s) 23, 46, 49, 207, 262, 265, 1728
FspBI CTAG 7 cut(s) 66, 71, 492, 827, 1530, 1538, 1545
GlaI GCGC 1 cut(s) 21
GluI GCNGC 7 cut(s) 23, 46, 49, 207, 262, 265, 1728
GsuI CTGGAG 4 cut(s) 785, 941, 1108, 1305
HaeIII GGCC 2 cut(s) 267, 387
HapII CCGG 2 cut(s) 527, 1054
HgaI GACGC 2 cut(s) 105, 201
HhaI GCGC 1 cut(s) 22
Hin1II CATG 7 cut(s) 1021, 1124, 1333, 1430, 1471, 1659, 1707
Hin6I GCGC 1 cut(s) 20
HinP1I GCGC 1 cut(s) 20
HincII GTYRAC 1 cut(s) 1150
HindII GTYRAC 1 cut(s) 1150
HinfI GANTC 4 cut(s) 994, 1390, 1402, 1486
HpaII CCGG 2 cut(s) 527, 1054
HphI GGTGA 1 cut(s) 1153
Hpy166II GTNNAC 3 cut(s) 1006, 1144, 1150
Hpy188I TCNGA 8 cut(s) 250, 522, 646, 733, 783, 972, 1199, 1635
Hpy8I GTNNAC 3 cut(s) 1006, 1144, 1150
Hpy99I CGWCG 1 cut(s) 195
HpyAV CCTTC 5 cut(s) 345, 399, 728, 824, 1051
HpyCH4III ACNGT 8 cut(s) 426, 626, 806, 1114, 1232, 1455, 1586, 1753
HpyCH4IV ACGT 4 cut(s) 1133, 1146, 1236, 1254
HpyCH4V TGCA 9 cut(s) 59, 122, 206, 317, 575, 1265, 1499, 1647, 1730
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 497, 1360
HpyF3I CTNAG 5 cut(s) 249, 302, 407, 439, 932
HpySE526I ACGT 4 cut(s) 1133, 1146, 1236, 1254
Hsp92II CATG 7 cut(s) 1021, 1124, 1333, 1430, 1471, 1659, 1707
HspAI GCGC 1 cut(s) 20
Ksp22I TGATCA 2 cut(s) 1429, 1479
LmnI GCTCC 4 cut(s) 4, 522, 922, 1775
Lsp1109I GCAGC 4 cut(s) 34, 60, 218, 1714
LweI GCATC 2 cut(s) 422, 1486
MaeI CTAG 7 cut(s) 66, 71, 492, 827, 1530, 1538, 1545
MaeII ACGT 4 cut(s) 1133, 1146, 1236, 1254
MaeIII GTNAC 5 cut(s) 344, 1108, 1114, 1220, 1232
MfeI CAATTG 3 cut(s) 396, 696, 1722
MhlI GDGCHC 3 cut(s) 527, 1655, 1772
MlyI GAGTC 2 cut(s) 1384, 1480
MmeI TCCRAC 2 cut(s) 308, 761
MroXI GAANNNNTTC 1 cut(s) 1181
MseI TTAA 5 cut(s) 549, 1290, 1296, 1680, 1789
MspCI CTTAAG 1 cut(s) 1679
MspI CCGG 2 cut(s) 527, 1054
MspR9I CCNGG 6 cut(s) 28, 527, 528, 841, 1055, 1161
MunI CAATTG 3 cut(s) 396, 696, 1722
Mva1269I GAATGC 1 cut(s) 1642
MvaI CCWGG 3 cut(s) 28, 841, 1161
MvnI CGCG 2 cut(s) 1011, 1518
MwoI GCNNNNNNNGC 3 cut(s) 227, 497, 1360
NciI CCSGG 3 cut(s) 527, 528, 1055
NcoI CCATGG 2 cut(s) 1655, 1703
NlaIII CATG 7 cut(s) 1021, 1124, 1333, 1430, 1471, 1659, 1707
NlaIV GGNNCC 2 cut(s) 524, 1165
NmeAIII GCCGAG 1 cut(s) 1011
NmuCI GTSAC 4 cut(s) 344, 1108, 1220, 1232
NruI TCGCGA 1 cut(s) 1518
PagI TCATGA 1 cut(s) 1426
PasI CCCWGGG 1 cut(s) 27
PctI GAATGC 1 cut(s) 1642
PdmI GAANNNNTTC 1 cut(s) 1181
PfeI GAWTC 2 cut(s) 994, 1402
PkrI GCNGC 7 cut(s) 24, 47, 50, 208, 263, 266, 1729
PleI GAGTC 2 cut(s) 1384, 1480
PpsI GAGTC 2 cut(s) 1384, 1480
Ppu21I YACGTR 1 cut(s) 1134
PshAI GACNNNNGTC 2 cut(s) 330, 804
PsiI TTATAA 1 cut(s) 581
Psp1406I AACGTT 1 cut(s) 1146
Psp6I CCWGG 3 cut(s) 26, 839, 1159
PspGI CCWGG 3 cut(s) 26, 839, 1159
PspN4I GGNNCC 2 cut(s) 524, 1165
PspPI GGNCC 7 cut(s) 386, 503, 701, 799, 1163, 1383, 1601
PstI CTGCAG 2 cut(s) 124, 208
RruI TCGCGA 1 cut(s) 1518
RsaI GTAC 3 cut(s) 402, 656, 1205
RsaNI GTAC 3 cut(s) 401, 655, 1204
SaqAI TTAA 5 cut(s) 549, 1290, 1296, 1680, 1789
SatI GCNGC 7 cut(s) 23, 46, 49, 207, 262, 265, 1728
Sau96I GGNCC 7 cut(s) 386, 503, 701, 799, 1163, 1383, 1601
SchI GAGTC 2 cut(s) 1384, 1480
ScrFI CCNGG 6 cut(s) 28, 527, 528, 841, 1055, 1161
SduI GDGCHC 3 cut(s) 527, 1655, 1772
SfaNI GCATC 2 cut(s) 422, 1486
SfcI CTRYAG 3 cut(s) 120, 204, 444
SinI GGWCC 6 cut(s) 503, 701, 799, 1163, 1383, 1601
SmaI CCCGGG 1 cut(s) 528
SmlI CTYRAG 2 cut(s) 196, 1679
SmoI CTYRAG 2 cut(s) 196, 1679
SpeI ACTAGT 1 cut(s) 1544
SsiI CCGC 9 cut(s) 45, 111, 221, 236, 261, 264, 323, 1009, 1361
SspMI CTAG 7 cut(s) 66, 71, 492, 827, 1530, 1538, 1545
StyD4I CCNGG 6 cut(s) 26, 525, 526, 839, 1053, 1159
StyI CCWWGG 2 cut(s) 1655, 1703
TaaI ACNGT 8 cut(s) 426, 626, 806, 1114, 1232, 1455, 1586, 1753
TaiI ACGT 4 cut(s) 1136, 1149, 1239, 1257
TaqI TCGA 7 cut(s) 13, 138, 456, 957, 1248, 1313, 1559
TaqII GACCGA 1 cut(s) 1400
TatI WGTACW 2 cut(s) 400, 654
TauI GCSGC 3 cut(s) 48, 264, 267
TfiI GAWTC 2 cut(s) 994, 1402
Tru1I TTAA 5 cut(s) 549, 1290, 1296, 1680, 1789
Tru9I TTAA 5 cut(s) 549, 1290, 1296, 1680, 1789
TscAI CASTG 6 cut(s) 82, 809, 1117, 1237, 1756, 1770
TseFI GTSAC 4 cut(s) 344, 1108, 1220, 1232
TseI GCWGC 4 cut(s) 22, 48, 206, 1727
Tsp45I GTSAC 4 cut(s) 344, 1108, 1220, 1232
TspDTI ATGAA 5 cut(s) 124, 366, 894, 1137, 1357
TspGWI ACGGA 4 cut(s) 182, 320, 735, 1771
TspMI CCCGGG 1 cut(s) 526
TspRI CASTG 6 cut(s) 82, 809, 1117, 1237, 1756, 1770
Vha464I CTTAAG 1 cut(s) 1679
VpaK11BI GGWCC 6 cut(s) 503, 701, 799, 1163, 1383, 1601
XagI CCTNNNNNAGG 1 cut(s) 69
XapI RAATTY 9 cut(s) 472, 611, 752, 881, 950, 1035, 1124, 1334, 1356
XcmI CCANNNNNNNNNTGG 1 cut(s) 1662
XmaI CCCGGG 1 cut(s) 526
XmnI GAANNNNTTC 1 cut(s) 1181
XspI CTAG 7 cut(s) 66, 71, 492, 827, 1530, 1538, 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.