MD15G1122100.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000131
Physical Location & Seq
Reverse (-)
8761767 .. 8763083
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1122100.v1.1.491

Sequence Viewer

Length: 1317 bp
ATGGAAGAAATCAGGGAAGATCCAGAAGACATCGAAAACCCTTGCATTCCGTTAGCAAATTCAATGAGTGAGGAGTTAGAGGGCTTGCCTCCGTTGTCCAATTTGGGTTGTATCTTCAGAATTCCTGAAGAACTACGGCGTGTAAATGAAAAGGCCTACACACCTCAAGTAGTCTCTATAGGTCCGCTTCACCACGGCAAGGAAGGCTTAAAAGACATGGAAGAACACAAGAGGAGGTATCTGCGGTATTTTTTGGATCGGACAAAGGTCCCCTTGGCAGATTATGTAACGAAAATAAAGGGCAGGGAAGCGGAATTGCGCAGTTGCTATGCGCAGACCATTGAGTTGAGCAGTGATGAATTTGTAAGAATCATTCTTGTGGATGCCGCGTTCATCATTGAGTTCTTATTGAGGTTCTTGGATCCGATCAAGCGGGATAGCAATGACCGCATCTTTCACAAACCATGGTTGGTAAATTCTGTATTACCTGACTTGCTTTTGCTTGAAAATCAGCTGCCTTTTTTCGTTCTTGAGGATCTCTTTGCCGCCGAGGAGAAGCCTTCAGTATTTGACCTCTCCTGCCAGTTCTGCAACGAATCAACGAGTTCATACGTGCAAAGAGACAATTCGAAATCTTCCCCTAGTTTAAAAGTAGATCATTTTGTTGATTTGATTAGAGCTTTAAATCTACCAACGGATGAGGAAGAGAGGGACAATCGAGGGTCGGTCAAAACTCTAGCTGTACCCAGCATGACGAAACTACACCAGGCTGGCATCAAGTTTAAGAAGCGATCAAACAAGAATCTATTTGCTATGTGTTTTAAAGACGGGATTTTGGAAATTCCAAATCTAATGATCGATGATAACACGGAGCTTGTACTCCGAAACCTTATTGCCTTTGAGCAATTCCGTTGCACTGAGGAAACCCGCCACTTCATTGACTATATCATCCTCATGGATTCTTTTGTCAACACCCCAAATGATGTGGACTTGCTTGTCAAGAATGGAATTGTTGAAACCATGCTTGGTGACAACAGTGAGGTGTCTACTCTGATTAACAGCCTTGGCAAAGGGGTTGTGTTTGAAAGAAAACATTTCTATTATGCTAAGCTTACAGAGGGCCTCAACAAGTACTACAAAAAGCCGTGGAACAAATGGAAGGGAGATCTGAGACAAAAATATTTCCACTCACCTTGGACAACTGTTTCTGTAATTGCTGCTACTTTGATCATCATACTCACTTTCATACAAACCTTATGTTCTTCTTCGCTGTGCAGACAAACGCTGTGTTCTTCTTCCCAATGCGCTCGACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

439

Amino Acids

50.52

Weight (kDa)

5.8

Isoelectric Point (pI)

47.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 38 - 413 3.1e-123 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 995
Acc16I TGCGCA 2 cut(s) 320, 333
AccI GTMKAC 1 cut(s) 1046
AccII CGCG 1 cut(s) 389
AciI CCGC 8 cut(s) 185, 244, 311, 387, 433, 448, 546, 928
AclWI GGATC 5 cut(s) 14, 264, 416, 429, 543
AcsI RAATTY 5 cut(s) 58, 120, 359, 475, 840
AcuI CTGAAG 3 cut(s) 100, 147, 546
AfaI GTAC 3 cut(s) 744, 879, 1133
AfiI CCNNNNNNNGG 1 cut(s) 199
AgsI TTSAA 4 cut(s) 63, 506, 1016, 1085
AjnI CCWGG 1 cut(s) 765
AjuI GAANNNNNNNTTGG 2 cut(s) 1008, 1040
AloI GAACNNNNNNTCC 2 cut(s) 374, 406
AluBI AGCT 5 cut(s) 514, 680, 740, 874, 1111
AluI AGCT 5 cut(s) 514, 680, 740, 874, 1111
Alw26I GTCTC 3 cut(s) 178, 615, 1165
AlwI GGATC 5 cut(s) 14, 264, 416, 429, 543
AoxI GGCC 2 cut(s) 153, 1120
ApeKI GCWGC 2 cut(s) 514, 1217
ApoI RAATTY 5 cut(s) 58, 120, 359, 475, 840
AspLEI GCGC 3 cut(s) 321, 334, 1307
AspS9I GGNCC 3 cut(s) 182, 268, 1120
AsuHPI GGTGA 3 cut(s) 182, 1040, 1182
AsuII TTCGAA 1 cut(s) 629
AvaII GGWCC 2 cut(s) 182, 268
BamHI GGATCC 1 cut(s) 421
BbsI GAAGAC 1 cut(s) 33
BbvI GCAGC 2 cut(s) 501, 1204
BceAI ACGGC 3 cut(s) 152, 211, 1129
BciT130I CCWGG 1 cut(s) 767
BclI TGATCA 1 cut(s) 1227
BcoDI GTCTC 3 cut(s) 178, 615, 1165
BfaI CTAG 2 cut(s) 642, 737
BfmI CTRYAG 1 cut(s) 177
BglII AGATCT 1 cut(s) 1165
BisI GCNGC 4 cut(s) 387, 515, 546, 1218
BlpI GCTNAGC 1 cut(s) 1107
BlsI GCNGC 4 cut(s) 388, 516, 547, 1219
BmcAI AGTACT 1 cut(s) 1133
Bme1390I CCNGG 1 cut(s) 767
Bme18I GGWCC 2 cut(s) 182, 268
BmgT120I GGNCC 3 cut(s) 182, 268, 1120
BmiI GGNNCC 2 cut(s) 270, 423
BmrFI CCNGG 1 cut(s) 767
BmsI GCATC 3 cut(s) 373, 459, 783
BoxI GACNNNNGTC 1 cut(s) 266
BpiI GAAGAC 1 cut(s) 33
Bpu1102I GCTNAGC 1 cut(s) 1107
Bpu14I TTCGAA 1 cut(s) 629
BpuEI CTTGAG 2 cut(s) 150, 551
Bsa29I ATCGAT 1 cut(s) 858
BsaAI YACGTR 1 cut(s) 613
BsaJI CCNNGG 7 cut(s) 193, 273, 464, 549, 1063, 1145, 1193
Bsc4I CCNNNNNNNGG 1 cut(s) 199
Bse1I ACTGG 1 cut(s) 583
Bse3DI GCAATG 1 cut(s) 448
BseBI CCWGG 1 cut(s) 767
BseCI ATCGAT 1 cut(s) 858
BseDI CCNNGG 7 cut(s) 193, 273, 464, 549, 1063, 1145, 1193
BseGI GGATG 3 cut(s) 388, 703, 948
BseLI CCNNNNNNNGG 1 cut(s) 199
BseMI GCAATG 1 cut(s) 448
BseMII CTCAG 2 cut(s) 909, 1160
BseNI ACTGG 1 cut(s) 583
BseRI GAGGAG 3 cut(s) 86, 247, 566
BseXI GCAGC 2 cut(s) 501, 1204
BseYI CCCAGC 1 cut(s) 746
BsgI GTGCAG 1 cut(s) 1294
Bsh1236I CGCG 1 cut(s) 389
BshFI GGCC 2 cut(s) 155, 1122
BshVI ATCGAT 1 cut(s) 858
BslFI GGGAC 2 cut(s) 254, 725
BslI CCNNNNNNNGG 1 cut(s) 199
BsmAI GTCTC 3 cut(s) 178, 615, 1165
BsmFI GGGAC 2 cut(s) 254, 725
BsmI GAATGC 1 cut(s) 45
BsnI GGCC 2 cut(s) 155, 1122
Bsp119I TTCGAA 1 cut(s) 629
Bsp1720I GCTNAGC 1 cut(s) 1107
Bsp19I CCATGG 1 cut(s) 464
BspACI CCGC 8 cut(s) 185, 244, 311, 387, 433, 448, 546, 928
BspANI GGCC 2 cut(s) 155, 1122
BspCNI CTCAG 2 cut(s) 910, 1161
BspDI ATCGAT 1 cut(s) 858
BspFNI CGCG 1 cut(s) 389
BspLI GGNNCC 2 cut(s) 270, 423
BspPI GGATC 5 cut(s) 14, 264, 416, 429, 543
BspT104I TTCGAA 1 cut(s) 629
BsrDI GCAATG 1 cut(s) 448
BsrI ACTGG 1 cut(s) 583
BssECI CCNNGG 7 cut(s) 193, 273, 464, 549, 1063, 1145, 1193
BssT1I CCWWGG 4 cut(s) 273, 464, 1063, 1193
Bst2UI CCWGG 1 cut(s) 767
Bst4CI ACNGT 2 cut(s) 1037, 1204
Bst6I CTCTTC 1 cut(s) 699
BstBAI YACGTR 1 cut(s) 613
BstBI TTCGAA 1 cut(s) 629
BstC8I GCNNGC 2 cut(s) 86, 772
BstDEI CTNAG 3 cut(s) 918, 1107, 1169
BstDSI CCRYGG 3 cut(s) 193, 464, 1145
BstF5I GGATG 3 cut(s) 388, 703, 948
BstFNI CGCG 1 cut(s) 389
BstHHI GCGC 3 cut(s) 321, 334, 1307
BstMAI GTCTC 3 cut(s) 178, 615, 1165
BstMWI GCNNNNNNNGC 3 cut(s) 204, 447, 588
BstNI CCWGG 1 cut(s) 767
BstPAI GACNNNNGTC 1 cut(s) 266
BstSCI CCNGG 1 cut(s) 765
BstSFI CTRYAG 1 cut(s) 177
BstUI CGCG 1 cut(s) 389
BstV1I GCAGC 2 cut(s) 501, 1204
BstV2I GAAGAC 1 cut(s) 33
BstX2I RGATCY 4 cut(s) 19, 421, 535, 1165
BstYI RGATCY 4 cut(s) 19, 421, 535, 1165
Bsu15I ATCGAT 1 cut(s) 858
BsuRI GGCC 2 cut(s) 155, 1122
BsuTUI ATCGAT 1 cut(s) 858
BtgI CCRYGG 3 cut(s) 193, 464, 1145
BtsCI GGATG 3 cut(s) 388, 703, 948
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 4 cut(s) 358, 915, 1042, 1312
Cac8I GCNNGC 2 cut(s) 86, 772
CfoI GCGC 3 cut(s) 321, 334, 1307
Cfr13I GGNCC 3 cut(s) 182, 268, 1120
ClaI ATCGAT 1 cut(s) 858
Csp6I GTAC 3 cut(s) 743, 878, 1132
CspCI CAANNNNNGTGG 4 cut(s) 966, 1001, 1175, 1210
CviAII CATG 5 cut(s) 217, 465, 751, 955, 1021
CviQI GTAC 3 cut(s) 743, 878, 1132
DdeI CTNAG 3 cut(s) 918, 1107, 1169
DraI TTTAAA 3 cut(s) 648, 684, 823
DrdI GACNNNNNNGTC 1 cut(s) 995
DseDI GACNNNNNNGTC 1 cut(s) 995
Eam1104I CTCTTC 1 cut(s) 699
EarI CTCTTC 1 cut(s) 699
Eco130I CCWWGG 4 cut(s) 273, 464, 1063, 1193
Eco147I AGGCCT 1 cut(s) 155
Eco47I GGWCC 2 cut(s) 182, 268
Eco57I CTGAAG 3 cut(s) 100, 147, 546
EcoO109I RGGNCCY 2 cut(s) 268, 1120
EcoRI GAATTC 1 cut(s) 120
EcoRII CCWGG 1 cut(s) 765
EcoT14I CCWWGG 4 cut(s) 273, 464, 1063, 1193
ErhI CCWWGG 4 cut(s) 273, 464, 1063, 1193
FaeI CATG 5 cut(s) 220, 468, 754, 958, 1024
FalI AAGNNNNNCTT 4 cut(s) 191, 223, 257, 289
FaqI GGGAC 2 cut(s) 254, 725
FatI CATG 5 cut(s) 216, 464, 750, 954, 1020
FauI CCCGC 2 cut(s) 426, 935
FbaI TGATCA 1 cut(s) 1227
FblI GTMKAC 1 cut(s) 1046
Fnu4HI GCNGC 4 cut(s) 387, 515, 546, 1218
FokI GGATG 3 cut(s) 395, 710, 935
Fsp4HI GCNGC 4 cut(s) 387, 515, 546, 1218
FspBI CTAG 2 cut(s) 642, 737
FspI TGCGCA 2 cut(s) 320, 333
GlaI GCGC 3 cut(s) 320, 333, 1306
GluI GCNGC 4 cut(s) 387, 515, 546, 1218
GsaI CCCAGC 1 cut(s) 750
HaeIII GGCC 2 cut(s) 155, 1122
HhaI GCGC 3 cut(s) 321, 334, 1307
Hin1II CATG 5 cut(s) 220, 468, 754, 958, 1024
Hin6I GCGC 3 cut(s) 319, 332, 1305
HinP1I GCGC 3 cut(s) 319, 332, 1305
HincII GTYRAC 1 cut(s) 970
HindII GTYRAC 1 cut(s) 970
HindIII AAGCTT 1 cut(s) 1109
HinfI GANTC 4 cut(s) 369, 596, 802, 959
HphI GGTGA 3 cut(s) 182, 1040, 1182
Hpy166II GTNNAC 3 cut(s) 970, 988, 1047
Hpy188I TCNGA 6 cut(s) 119, 261, 426, 884, 1053, 1170
Hpy188III TCNNGA 4 cut(s) 23, 125, 530, 1000
Hpy8I GTNNAC 3 cut(s) 970, 988, 1047
HpyAV CCTTC 3 cut(s) 197, 570, 1153
HpyCH4III ACNGT 2 cut(s) 1037, 1204
HpyCH4IV ACGT 1 cut(s) 612
HpyCH4V TGCA 5 cut(s) 45, 591, 616, 915, 1275
HpyF10VI GCNNNNNNNGC 3 cut(s) 204, 447, 588
HpyF3I CTNAG 3 cut(s) 918, 1107, 1169
HpySE526I ACGT 1 cut(s) 612
Hsp92II CATG 5 cut(s) 220, 468, 754, 958, 1024
HspAI GCGC 3 cut(s) 319, 332, 1305
Ksp22I TGATCA 1 cut(s) 1227
LmnI GCTCC 1 cut(s) 871
Lsp1109I GCAGC 2 cut(s) 501, 1204
LweI GCATC 3 cut(s) 373, 459, 783
MaeI CTAG 2 cut(s) 642, 737
MaeII ACGT 1 cut(s) 612
MaeIII GTNAC 2 cut(s) 286, 1028
MflI RGATCY 4 cut(s) 19, 421, 535, 1165
MseI TTAA 6 cut(s) 209, 647, 683, 783, 822, 1056
MslI CAYNNNNRTG 2 cut(s) 377, 953
MspA1I CMGCKG 1 cut(s) 514
MspR9I CCNGG 1 cut(s) 767
Mva1269I GAATGC 1 cut(s) 45
MvaI CCWGG 1 cut(s) 767
MvnI CGCG 1 cut(s) 389
MwoI GCNNNNNNNGC 3 cut(s) 204, 447, 588
NcoI CCATGG 1 cut(s) 464
NlaIII CATG 5 cut(s) 220, 468, 754, 958, 1024
NlaIV GGNNCC 2 cut(s) 270, 423
NmeAIII GCCGAG 1 cut(s) 574
NmuCI GTSAC 1 cut(s) 1028
NsbI TGCGCA 2 cut(s) 320, 333
NspV TTCGAA 1 cut(s) 629
PceI AGGCCT 1 cut(s) 155
PctI GAATGC 1 cut(s) 45
PfeI GAWTC 4 cut(s) 369, 596, 802, 959
PkrI GCNGC 4 cut(s) 388, 516, 547, 1219
Ppu21I YACGTR 1 cut(s) 613
PpuMI RGGWCCY 1 cut(s) 268
PshAI GACNNNNGTC 1 cut(s) 266
Psp5II RGGWCCY 1 cut(s) 268
Psp6I CCWGG 1 cut(s) 765
PspFI CCCAGC 1 cut(s) 746
PspGI CCWGG 1 cut(s) 765
PspN4I GGNNCC 2 cut(s) 270, 423
PspPI GGNCC 3 cut(s) 182, 268, 1120
PspPPI RGGWCCY 1 cut(s) 268
PsuI RGATCY 4 cut(s) 19, 421, 535, 1165
PvuII CAGCTG 1 cut(s) 514
RsaI GTAC 3 cut(s) 744, 879, 1133
RsaNI GTAC 3 cut(s) 743, 878, 1132
RseI CAYNNNNRTG 2 cut(s) 377, 953
SaqAI TTAA 6 cut(s) 209, 647, 683, 783, 822, 1056
SatI GCNGC 4 cut(s) 387, 515, 546, 1218
Sau96I GGNCC 3 cut(s) 182, 268, 1120
ScaI AGTACT 1 cut(s) 1133
ScrFI CCNGG 1 cut(s) 767
SfaNI GCATC 3 cut(s) 373, 459, 783
SfcI CTRYAG 1 cut(s) 177
SfuI TTCGAA 1 cut(s) 629
SinI GGWCC 2 cut(s) 182, 268
SmiMI CAYNNNNRTG 2 cut(s) 377, 953
SmlI CTYRAG 2 cut(s) 165, 530
SmoI CTYRAG 2 cut(s) 165, 530
SseBI AGGCCT 1 cut(s) 155
SsiI CCGC 8 cut(s) 185, 244, 311, 387, 433, 448, 546, 928
SspI AATATT 1 cut(s) 1181
SspMI CTAG 2 cut(s) 642, 737
StuI AGGCCT 1 cut(s) 155
StyD4I CCNGG 1 cut(s) 765
StyI CCWWGG 4 cut(s) 273, 464, 1063, 1193
TaaI ACNGT 2 cut(s) 1037, 1204
TaiI ACGT 1 cut(s) 615
TaqI TCGA 5 cut(s) 33, 629, 718, 858, 1309
TaqII GACCGA 1 cut(s) 715
TatI WGTACW 2 cut(s) 877, 1131
TauI GCSGC 2 cut(s) 389, 548
TfiI GAWTC 4 cut(s) 369, 596, 802, 959
Tru1I TTAA 6 cut(s) 209, 647, 683, 783, 822, 1056
Tru9I TTAA 6 cut(s) 209, 647, 683, 783, 822, 1056
TscAI CASTG 3 cut(s) 358, 922, 1042
TseFI GTSAC 1 cut(s) 1028
TseI GCWGC 2 cut(s) 514, 1217
Tsp45I GTSAC 1 cut(s) 1028
TspDTI ATGAA 6 cut(s) 162, 372, 382, 597, 925, 1234
TspGWI ACGGA 5 cut(s) 39, 81, 710, 884, 899
TspRI CASTG 3 cut(s) 358, 922, 1042
VpaK11BI GGWCC 2 cut(s) 182, 268
XapI RAATTY 5 cut(s) 58, 120, 359, 475, 840
XmiI GTMKAC 1 cut(s) 1046
XspI CTAG 2 cut(s) 642, 737
ZrmI AGTACT 1 cut(s) 1133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.