MD15G1123000.v1.1

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000131
Physical Location & Seq
Reverse (-)
8862982 .. 8864394
1413 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1123000.v1.1.491

Sequence Viewer

Length: 1413 bp
ATGCCGCCCAGGAAGAAAGTGGAACATAGCACCAATAAAGCTCCAGATGACATAGAAAGTGCCTGCAACTCAGTAGTACTAGTGACTTCGATGACAGAGCGGTTGAAAGGCTTGTCACCCCTGTCCCCTTACTGTTGTATCTACAAAGTTCCTGAGCGACTACGGTCTGTGAATAAGAAGGCCTACACACCTCAAGTAGTCTCAGTAGGCCCACTCCACTATGATAATAAAGACTTGTTATACATGGAAGAACACAAACAGAGGTACCTACAACAATTTCTACATCGGACTGGGGTAAGCTTGGAGGATTATGTGAAGAAAATAAAGGCCCAAGAAGAAAGACTGCGTGGTTGTTATGAAGGAAAAGCCAGTGAGTTTAAGAGTGATGTATTTGTAAGTATCATTTTAGTTGATGCCGCCTTCATGATTGAGCTCTTATTGAGGAACTTTTTCGAGGATTTGAGGGATGATAGTGACTGGATATTCAAGAAAACATGGATGTTGCAAAATATAGCGCCTGACATGATTTTACTTGAAAATCAGCTGCCATTTTTCATTCTTGAAGATCTTTTCGCAGATGTTAAATCTAAATGGCAAAAAGATGAGCTGCCTTCAATAACAGAGCTCTCTTACAAGTTCTTCCAGGAGACGGTGCGTTTACAGGGGGAAAAAGACAATTTGGAGTCTGTTTCGGAAGTAAAACACTTTGTTGATTTGATAAGAACTTTACATCTACCATATTTGAAGAGCACACAAACTGGAGGGCCCACATCTTCTTGTACTCCTAAGGTTAAGCACTTCTGTGATCGTAGAAGAAGGTTTCTACCATCTCAAAAGTCACAAACTGAAAAGCCACTCCCAAGTACTCTAAATACACCAAGCGCTAAGAAGCTACACCAGGCTGGAGTCAAGTTTGAGATCAGTTCAAGCAAAAATTTGTTTGATATACAATTCGATAATCAAGGTATTCTGCAAATTCCACAAGTAGAAATAAACGATTACACGGAGCTTACACTCAGAAATCTCCTTGCATTTGAACAATGCCATTGCACGGAGAATCACATAAGCGATTATTTCTGCATCTTGGATGGTTTTGTAAACACCCCAATGGATGTAGATTTCCTTGTTGAGTATGGAATAATTGTGAATGCGCTCGGCGACAACAATAAGGTTTCTAGACTGATTAACAAGCTTTGCATCGGGGTTTCTTGGAACCACAAAAACTACTACTTTGCTGATCTTTCTAAGGAGCTGAACTACTACTGTCGTAAGCCGTGGAACAAATGGAAGGCAAGCTTGAAACAAAAGTATTTCAACACACCTTGGGCAATTATTTCTGTCATTGGAGCTGGTTTTGTCATCGTACTCGCTATCATACAAACAGTGTGTTCTATTATCTCTTCCATTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

471

Amino Acids

54.34

Weight (kDa)

8.12

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 47 - 456 1.2e-118 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 264
AccB1I GGYRCC 1 cut(s) 264
AccBSI CCGCTC 1 cut(s) 100
AciI CCGC 3 cut(s) 5, 100, 417
AcsI RAATTY 2 cut(s) 934, 975
AfaI GTAC 5 cut(s) 78, 266, 781, 865, 1365
AfeI AGCGCT 1 cut(s) 883
AfiI CCNNNNNNNGG 2 cut(s) 649, 1051
AhlI ACTAGT 1 cut(s) 79
AjnI CCWGG 3 cut(s) 8, 642, 897
AleI CACNNNNGTG 1 cut(s) 801
Alw21I GWGCWC 3 cut(s) 435, 627, 752
Alw26I GTCTC 2 cut(s) 205, 641
Aor51HI AGCGCT 1 cut(s) 883
AoxI GGCC 4 cut(s) 180, 208, 327, 764
ApaI GGGCCC 1 cut(s) 768
ApeKI GCWGC 2 cut(s) 544, 607
ApoI RAATTY 2 cut(s) 934, 975
Asp700I GAANNNNTTC 1 cut(s) 449
Asp718I GGTACC 1 cut(s) 264
AspLEI GCGC 3 cut(s) 517, 884, 1153
AspS9I GGNCC 4 cut(s) 209, 328, 764, 765
AsuHPI GGTGA 1 cut(s) 108
AxyI CCTNAGG 1 cut(s) 786
BaeGI GKGCMC 1 cut(s) 768
BaeI ACNNNNGTAYC 4 cut(s) 121, 154, 248, 281
BanI GGYRCC 1 cut(s) 264
BanII GRGCYC 3 cut(s) 435, 627, 768
Bbv12I GWGCWC 3 cut(s) 435, 627, 752
BbvI GCAGC 2 cut(s) 531, 594
BccI CCATC 2 cut(s) 835, 1082
BceAI ACGGC 1 cut(s) 1258
BciT130I CCWGG 3 cut(s) 10, 644, 899
BcoDI GTCTC 2 cut(s) 205, 641
BcuI ACTAGT 1 cut(s) 79
BfaI CTAG 2 cut(s) 80, 1176
BfoI RGCGCY 2 cut(s) 518, 885
BglII AGATCT 1 cut(s) 565
BisI GCNGC 4 cut(s) 5, 417, 545, 608
BlsI GCNGC 4 cut(s) 6, 418, 546, 609
BmcAI AGTACT 2 cut(s) 78, 865
Bme1390I CCNGG 3 cut(s) 10, 644, 899
BmgT120I GGNCC 4 cut(s) 209, 328, 764, 765
BmiI GGNNCC 3 cut(s) 266, 766, 1214
BmrFI CCNGG 3 cut(s) 10, 644, 899
BmrI ACTGGG 1 cut(s) 300
BmsI GCATC 3 cut(s) 403, 1089, 1206
BmuI ACTGGG 1 cut(s) 300
BoxI GACNNNNGTC 1 cut(s) 163
BpmI CTGGAG 3 cut(s) 27, 780, 924
Bpu10I CCTNAGC 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 177
BsaJI CCNNGG 3 cut(s) 8, 1274, 1322
Bsc4I CCNNNNNNNGG 2 cut(s) 649, 1051
Bse1I ACTGG 4 cut(s) 295, 369, 482, 763
Bse21I CCTNAGG 1 cut(s) 786
Bse3DI GCAATG 1 cut(s) 1045
BseBI CCWGG 3 cut(s) 10, 644, 899
BseDI CCNNGG 3 cut(s) 8, 1274, 1322
BseGI GGATG 4 cut(s) 472, 504, 1093, 1117
BseLI CCNNNNNNNGG 2 cut(s) 649, 1051
BseMI GCAATG 1 cut(s) 1045
BseMII CTCAG 4 cut(s) 84, 144, 216, 1030
BseNI ACTGG 4 cut(s) 295, 369, 482, 763
BseSI GKGCMC 1 cut(s) 768
BseXI GCAGC 2 cut(s) 531, 594
BshFI GGCC 4 cut(s) 182, 210, 329, 766
BshNI GGYRCC 1 cut(s) 264
BsiHKAI GWGCWC 3 cut(s) 435, 627, 752
BslFI GGGAC 1 cut(s) 109
BslI CCNNNNNNNGG 2 cut(s) 649, 1051
BsmAI GTCTC 2 cut(s) 205, 641
BsmBI CGTCTC 1 cut(s) 641
BsmFI GGGAC 1 cut(s) 109
BsmI GAATGC 1 cut(s) 1153
BsnI GGCC 4 cut(s) 182, 210, 329, 766
Bsp120I GGGCCC 1 cut(s) 764
Bsp1286I GDGCHC 4 cut(s) 435, 627, 752, 768
Bsp143I GATC 4 cut(s) 565, 805, 918, 1237
BspACI CCGC 3 cut(s) 5, 100, 417
BspANI GGCC 4 cut(s) 182, 210, 329, 766
BspCNI CTCAG 4 cut(s) 83, 145, 215, 1029
BspHI TCATGA 1 cut(s) 423
BspLI GGNNCC 3 cut(s) 266, 766, 1214
BspQI GCTCTTC 1 cut(s) 740
BspT107I GGYRCC 1 cut(s) 264
BsrBI CCGCTC 1 cut(s) 100
BsrDI GCAATG 1 cut(s) 1045
BsrI ACTGG 4 cut(s) 295, 369, 482, 763
BssECI CCNNGG 3 cut(s) 8, 1274, 1322
BssMI GATC 4 cut(s) 565, 805, 918, 1237
BssT1I CCWWGG 1 cut(s) 1322
Bst2UI CCWGG 3 cut(s) 10, 644, 899
Bst4CI ACNGT 5 cut(s) 134, 165, 652, 1265, 1384
Bst6I CTCTTC 2 cut(s) 740, 1405
BstC8I GCNNGC 2 cut(s) 64, 1294
BstDEI CTNAG 7 cut(s) 70, 153, 202, 786, 885, 1016, 1245
BstDSI CCRYGG 1 cut(s) 1274
BstF5I GGATG 4 cut(s) 472, 504, 1093, 1117
BstH2I RGCGCY 2 cut(s) 518, 885
BstHHI GCGC 3 cut(s) 517, 884, 1153
BstKTI GATC 4 cut(s) 568, 808, 921, 1240
BstMAI GTCTC 2 cut(s) 205, 641
BstMBI GATC 4 cut(s) 565, 805, 918, 1237
BstNI CCWGG 3 cut(s) 10, 644, 899
BstPAI GACNNNNGTC 1 cut(s) 163
BstSCI CCNGG 3 cut(s) 8, 642, 897
BstSLI GKGCMC 1 cut(s) 768
BstV1I GCAGC 2 cut(s) 531, 594
BstX2I RGATCY 1 cut(s) 565
BstYI RGATCY 1 cut(s) 565
Bsu36I CCTNAGG 1 cut(s) 786
BsuRI GGCC 4 cut(s) 182, 210, 329, 766
BtgI CCRYGG 1 cut(s) 1274
BtsCI GGATG 4 cut(s) 472, 504, 1093, 1117
BtsIMutI CAGTG 2 cut(s) 376, 1389
Cac8I GCNNGC 2 cut(s) 64, 1294
CciI TCATGA 1 cut(s) 423
CfoI GCGC 3 cut(s) 517, 884, 1153
Cfr13I GGNCC 4 cut(s) 209, 328, 764, 765
Csp6I GTAC 5 cut(s) 77, 265, 780, 864, 1364
CviAII CATG 4 cut(s) 244, 424, 495, 523
CviQI GTAC 5 cut(s) 77, 265, 780, 864, 1364
DdeI CTNAG 7 cut(s) 70, 153, 202, 786, 885, 1016, 1245
DpnI GATC 4 cut(s) 567, 807, 920, 1239
DpnII GATC 4 cut(s) 565, 805, 918, 1237
Eam1104I CTCTTC 2 cut(s) 740, 1405
EarI CTCTTC 2 cut(s) 740, 1405
Ecl136II GAGCTC 2 cut(s) 433, 625
Eco130I CCWWGG 1 cut(s) 1322
Eco147I AGGCCT 1 cut(s) 182
Eco24I GRGCYC 3 cut(s) 435, 627, 768
Eco47III AGCGCT 1 cut(s) 883
Eco53kI GAGCTC 2 cut(s) 433, 625
Eco81I CCTNAGG 1 cut(s) 786
EcoICRI GAGCTC 2 cut(s) 433, 625
EcoO109I RGGNCCY 1 cut(s) 764
EcoRII CCWGG 3 cut(s) 8, 642, 897
EcoT14I CCWWGG 1 cut(s) 1322
EcoT38I GRGCYC 3 cut(s) 435, 627, 768
ErhI CCWWGG 1 cut(s) 1322
Esp3I CGTCTC 1 cut(s) 641
FaeI CATG 4 cut(s) 247, 427, 498, 526
FalI AAGNNNNNCTT 2 cut(s) 1280, 1312
FaqI GGGAC 1 cut(s) 109
FatI CATG 4 cut(s) 243, 423, 494, 522
Fnu4HI GCNGC 4 cut(s) 5, 417, 545, 608
FokI GGATG 4 cut(s) 479, 511, 1100, 1124
FriOI GRGCYC 3 cut(s) 435, 627, 768
Fsp4HI GCNGC 4 cut(s) 5, 417, 545, 608
FspBI CTAG 2 cut(s) 80, 1176
GlaI GCGC 3 cut(s) 516, 883, 1152
GluI GCNGC 4 cut(s) 5, 417, 545, 608
GsuI CTGGAG 3 cut(s) 27, 780, 924
HaeII RGCGCY 2 cut(s) 518, 885
HaeIII GGCC 4 cut(s) 182, 210, 329, 766
HhaI GCGC 3 cut(s) 517, 884, 1153
Hin1II CATG 4 cut(s) 247, 427, 498, 526
Hin6I GCGC 3 cut(s) 515, 882, 1151
HinP1I GCGC 3 cut(s) 515, 882, 1151
HindIII AAGCTT 3 cut(s) 298, 1190, 1294
HinfI GANTC 3 cut(s) 683, 906, 1057
HphI GGTGA 1 cut(s) 108
Hpy166II GTNNAC 2 cut(s) 659, 1099
Hpy188I TCNGA 3 cut(s) 288, 694, 1019
Hpy188III TCNNGA 6 cut(s) 44, 152, 424, 487, 560, 1176
Hpy8I GTNNAC 2 cut(s) 659, 1099
HpyAV CCTTC 6 cut(s) 172, 353, 430, 621, 810, 1282
HpyCH4III ACNGT 5 cut(s) 134, 165, 652, 1265, 1384
HpyCH4V TGCA 7 cut(s) 66, 505, 973, 1031, 1050, 1080, 1197
HpyF3I CTNAG 7 cut(s) 70, 153, 202, 786, 885, 1016, 1245
Hsp92II CATG 4 cut(s) 247, 427, 498, 526
HspAI GCGC 3 cut(s) 515, 882, 1151
KpnI GGTACC 1 cut(s) 268
Kzo9I GATC 4 cut(s) 565, 805, 918, 1237
LguI GCTCTTC 1 cut(s) 740
LmnI GCTCC 4 cut(s) 46, 1006, 1249, 1346
Lsp1109I GCAGC 2 cut(s) 531, 594
LweI GCATC 3 cut(s) 403, 1089, 1206
MaeI CTAG 2 cut(s) 80, 1176
MaeIII GTNAC 4 cut(s) 82, 114, 473, 837
MalI GATC 4 cut(s) 567, 807, 920, 1239
MbiI CCGCTC 1 cut(s) 100
MboI GATC 4 cut(s) 565, 805, 918, 1237
MflI RGATCY 1 cut(s) 565
MhlI GDGCHC 4 cut(s) 435, 627, 752, 768
MluCI AATT 7 cut(s) 275, 676, 934, 950, 975, 1140, 1329
MlyI GAGTC 2 cut(s) 692, 915
MnlI CCTC 7 cut(s) 201, 255, 298, 435, 448, 456, 755
MroXI GAANNNNTTC 1 cut(s) 449
MseI TTAA 4 cut(s) 378, 582, 792, 1185
MslI CAYNNNNRTG 2 cut(s) 801, 1106
MspA1I CMGCKG 1 cut(s) 544
MspR9I CCNGG 3 cut(s) 10, 644, 899
Mva1269I GAATGC 1 cut(s) 1153
MvaI CCWGG 3 cut(s) 10, 644, 899
NdeII GATC 4 cut(s) 565, 805, 918, 1237
NlaIII CATG 4 cut(s) 247, 427, 498, 526
NlaIV GGNNCC 3 cut(s) 266, 766, 1214
NmeAIII GCCGAG 1 cut(s) 1134
NmuCI GTSAC 4 cut(s) 82, 114, 473, 837
OliI CACNNNNGTG 1 cut(s) 801
PagI TCATGA 1 cut(s) 423
PceI AGGCCT 1 cut(s) 182
PciSI GCTCTTC 1 cut(s) 740
PctI GAATGC 1 cut(s) 1153
PdmI GAANNNNTTC 1 cut(s) 449
PfeI GAWTC 1 cut(s) 1057
PfoI TCCNGGA 1 cut(s) 642
PkrI GCNGC 4 cut(s) 6, 418, 546, 609
PleI GAGTC 2 cut(s) 691, 914
PpsI GAGTC 2 cut(s) 691, 914
PshAI GACNNNNGTC 1 cut(s) 163
Psp124BI GAGCTC 2 cut(s) 435, 627
Psp6I CCWGG 3 cut(s) 8, 642, 897
PspGI CCWGG 3 cut(s) 8, 642, 897
PspN4I GGNNCC 3 cut(s) 266, 766, 1214
PspOMI GGGCCC 1 cut(s) 764
PspPI GGNCC 4 cut(s) 209, 328, 764, 765
PsuI RGATCY 1 cut(s) 565
PvuII CAGCTG 1 cut(s) 544
RsaI GTAC 5 cut(s) 78, 266, 781, 865, 1365
RsaNI GTAC 5 cut(s) 77, 265, 780, 864, 1364
RseI CAYNNNNRTG 2 cut(s) 801, 1106
SacI GAGCTC 2 cut(s) 435, 627
SapI GCTCTTC 1 cut(s) 740
SaqAI TTAA 4 cut(s) 378, 582, 792, 1185
SatI GCNGC 4 cut(s) 5, 417, 545, 608
Sau3AI GATC 4 cut(s) 565, 805, 918, 1237
Sau96I GGNCC 4 cut(s) 209, 328, 764, 765
ScaI AGTACT 2 cut(s) 78, 865
SchI GAGTC 2 cut(s) 692, 915
ScrFI CCNGG 3 cut(s) 10, 644, 899
SduI GDGCHC 4 cut(s) 435, 627, 752, 768
SfaNI GCATC 3 cut(s) 403, 1089, 1206
SmiMI CAYNNNNRTG 2 cut(s) 801, 1106
SmlI CTYRAG 1 cut(s) 192
SmoI CTYRAG 1 cut(s) 192
SpeI ACTAGT 1 cut(s) 79
Sse9I AATT 7 cut(s) 275, 676, 934, 950, 975, 1140, 1329
SseBI AGGCCT 1 cut(s) 182
SsiI CCGC 3 cut(s) 5, 100, 417
SspMI CTAG 2 cut(s) 80, 1176
SstI GAGCTC 2 cut(s) 435, 627
StuI AGGCCT 1 cut(s) 182
StyD4I CCNGG 3 cut(s) 8, 642, 897
StyI CCWWGG 1 cut(s) 1322
TaaI ACNGT 5 cut(s) 134, 165, 652, 1265, 1384
TaqI TCGA 3 cut(s) 89, 453, 954
TasI AATT 7 cut(s) 275, 676, 934, 950, 975, 1140, 1329
TatI WGTACW 3 cut(s) 76, 779, 863
TauI GCSGC 2 cut(s) 7, 419
TfiI GAWTC 1 cut(s) 1057
Tru1I TTAA 4 cut(s) 378, 582, 792, 1185
Tru9I TTAA 4 cut(s) 378, 582, 792, 1185
TscAI CASTG 2 cut(s) 376, 1389
TseFI GTSAC 4 cut(s) 82, 114, 473, 837
TseI GCWGC 2 cut(s) 544, 607
Tsp45I GTSAC 4 cut(s) 82, 114, 473, 837
TspDTI ATGAA 4 cut(s) 372, 412, 544, 1397
TspGWI ACGGA 2 cut(s) 1019, 1067
TspRI CASTG 2 cut(s) 376, 1389
XapI RAATTY 2 cut(s) 934, 975
XbaI TCTAGA 1 cut(s) 1175
XcmI CCANNNNNNNNNTGG 1 cut(s) 16
XmnI GAANNNNTTC 1 cut(s) 449
XspI CTAG 2 cut(s) 80, 1176
ZrmI AGTACT 2 cut(s) 78, 865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.