Rmu_sc0006252.1_g000006

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006252.1
OG0000131
Physical Location & Seq
Reverse (-)
29482 .. 31337
1856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006252.1_g000006.1.cds

Sequence Viewer

Length: 1440 bp
atgaagtacccatccggcagccagcatagggacaatgcggtgatgctggcgctacccttggttgccaccggacatgaatgtttggaggtgtttgtgctctctaatggcgctagggctaagagagaaagaataggggctgtgcgactcatatgtgctaaaactaatttggatatgggagagctacagccaaaaaatctgaaacaaaagttggaaaaagtgtctccactttctcctcagtgttgtatctacagggttccaaagagactacgtaaccagaatgagaaggcatacacacctcaagtggtctcaataggcccgcttcaccatggtggaaaagacctagaagccatggaagatcacaaaatacggtatgtgaaggactttctagaacggaccaaggtaagcatggaggaatgtttcaatacctggaagaggcgggagacagaaatccgtgcttgttatgcagtaaaaattgaatacgaagaaactgagcttgtggaaatggttcttgtagattccattttcatctttgagctcctgctgagggttccttaccaagaactgcaaaaggaaaaggttgaccgtgtattcggaaaaccatggatgcaaagggacataacatatgacttgttattgcttgaaaatcagatcccattcttcattcttgagtatctttattccttagcccttgcccgtaatactattcctctggaagctaatggggtgctttctctctttgagcttacccaccgatttttggagaagagcgtatacataaggtcatatgatccagaaatgaagaagaaactcgagcataaacaaatacaacattttgttgattttgtcctcacatgtcatcgacctttaccttctgagcttcccaaagcggagaaactcaagagtttaaccataccaagtgcaacagaattataccagtccggagtcaagtttgtgaaaggcgatgacaaaaacatatttgacataaaatttgagaatggggtcctgaaaattccacacttgagaatccgcgggtcaacagaaattttctttcggaatctcattgcctacgagcagtgtgagctccgtgatcactacatccacgattatgtgttcatcattgacggcctggttgaaagttctaaggatgtggacttgcttgttaaggcgggaatccttgactctaagctaccggatagtgaagcaacaacacgttttatcaattcccttgactcggggcctattctgttcagtaaaaaatcctatgttactgatctctgtgacgctctgaatgcatactatagggtcccctggcacaagtggaaggcaagcttgaaacaggactactttagttctccatgggctggaatgtctattgttgtagcggctattctcgttgtgctcacttttattcaaacagtgtgctctataatgtctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

479

Amino Acids

55.37

Weight (kDa)

8.17

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1361
AccI GTMKAC 1 cut(s) 771
AccII CGCG 1 cut(s) 1029
AccIII TCCGGA 1 cut(s) 938
AciI CCGC 8 cut(s) 38, 317, 436, 887, 1027, 1029, 1166, 1382
AclWI GGATC 2 cut(s) 643, 782
AcsI RAATTY 3 cut(s) 986, 1008, 1041
AfaI GTAC 1 cut(s) 8
AfiI CCNNNNNNNGG 6 cut(s) 28, 432, 544, 757, 1231, 1361
AflIII ACRYGT 2 cut(s) 851, 1208
AgsI TTSAA 6 cut(s) 421, 476, 641, 1133, 1333, 1412
AjnI CCWGG 3 cut(s) 425, 1125, 1307
AjuI GAANNNNNNNTTGG 2 cut(s) 191, 223
AleI CACNNNNGTG 1 cut(s) 327
AluBI AGCT 9 cut(s) 181, 493, 535, 716, 742, 877, 1081, 1186, 1329
AluI AGCT 9 cut(s) 181, 493, 535, 716, 742, 877, 1081, 1186, 1329
Alw21I GWGCWC 5 cut(s) 99, 537, 1083, 1401, 1424
Alw26I GTCTC 4 cut(s) 225, 256, 310, 434
AlwI GGATC 2 cut(s) 643, 782
Ama87I CYCGRG 2 cut(s) 809, 1231
Aor13HI TCCGGA 1 cut(s) 938
AoxI GGCC 3 cut(s) 313, 1123, 1235
ApeKI GCWGC 1 cut(s) 18
ApoI RAATTY 3 cut(s) 986, 1008, 1041
ArsI GACNNNNNNTTYG 4 cut(s) 572, 604, 971, 1003
Asp700I GAANNNNTTC 1 cut(s) 504
AspLEI GCGC 2 cut(s) 52, 110
AspS9I GGNCC 5 cut(s) 314, 393, 1000, 1235, 1303
AsuHPI GGTGA 2 cut(s) 52, 314
AvaI CYCGRG 2 cut(s) 809, 1231
AvaII GGWCC 3 cut(s) 393, 1000, 1303
BanII GRGCYC 2 cut(s) 537, 1083
BarI GAAGNNNNNNTAC 2 cut(s) 755, 787
Bbv12I GWGCWC 5 cut(s) 99, 537, 1083, 1401, 1424
BbvCI CCTCAGC 1 cut(s) 542
BbvI GCAGC 1 cut(s) 30
BccI CCATC 1 cut(s) 19
BceAI ACGGC 1 cut(s) 1138
BciT130I CCWGG 3 cut(s) 427, 1127, 1309
BclI TGATCA 1 cut(s) 1087
BcoDI GTCTC 4 cut(s) 225, 256, 310, 434
BfaI CTAG 3 cut(s) 111, 341, 386
BfmI CTRYAG 3 cut(s) 182, 247, 1297
BfoI RGCGCY 2 cut(s) 53, 111
BisI GCNGC 2 cut(s) 19, 1383
BlsI GCNGC 2 cut(s) 20, 1384
Bme1390I CCNGG 3 cut(s) 427, 1127, 1309
Bme18I GGWCC 3 cut(s) 393, 1000, 1303
BmeT110I CYCGRG 2 cut(s) 809, 1231
BmgT120I GGNCC 5 cut(s) 314, 393, 1000, 1235, 1303
BmiI GGNNCC 6 cut(s) 255, 549, 1001, 1236, 1304, 1305
BmrFI CCNGG 3 cut(s) 427, 1127, 1309
BmsI GCATC 2 cut(s) 33, 594
Bpu10I CCTNAGC 2 cut(s) 542, 682
BpuEI CTTGAG 4 cut(s) 282, 686, 881, 1039
BsaAI YACGTR 1 cut(s) 269
BsaI GGTCTC 1 cut(s) 310
BsaJI CCNNGG 8 cut(s) 57, 325, 348, 396, 599, 1027, 1307, 1355
BsaWI WCCGGW 3 cut(s) 68, 938, 1189
Bsc4I CCNNNNNNNGG 6 cut(s) 28, 432, 544, 757, 1231, 1361
Bse1I ACTGG 1 cut(s) 934
Bse3DI GCAATG 1 cut(s) 1059
BseAI TCCGGA 1 cut(s) 938
BseBI CCWGG 3 cut(s) 427, 1127, 1309
BseDI CCNNGG 8 cut(s) 57, 325, 348, 396, 599, 1027, 1307, 1355
BseGI GGATG 4 cut(s) 11, 609, 1095, 1150
BseLI CCNNNNNNNGG 6 cut(s) 28, 432, 544, 757, 1231, 1361
BseMI GCAATG 1 cut(s) 1059
BseMII CTCAG 4 cut(s) 248, 480, 533, 864
BseNI ACTGG 1 cut(s) 934
BseRI GAGGAG 1 cut(s) 222
BseXI GCAGC 1 cut(s) 30
Bsh1236I CGCG 1 cut(s) 1029
BshFI GGCC 3 cut(s) 315, 1125, 1237
BsiHKAI GWGCWC 5 cut(s) 99, 537, 1083, 1401, 1424
BsiHKCI CYCGRG 2 cut(s) 809, 1231
BsiSI CCGG 4 cut(s) 15, 69, 939, 1190
BslFI GGGAC 3 cut(s) 44, 626, 1289
BslI CCNNNNNNNGG 6 cut(s) 28, 432, 544, 757, 1231, 1361
BsmAI GTCTC 4 cut(s) 225, 256, 310, 434
BsmFI GGGAC 3 cut(s) 44, 626, 1289
BsmI GAATGC 1 cut(s) 1294
BsnI GGCC 3 cut(s) 315, 1125, 1237
Bso31I GGTCTC 1 cut(s) 310
BsoBI CYCGRG 2 cut(s) 809, 1231
Bsp1286I GDGCHC 5 cut(s) 99, 537, 1083, 1401, 1424
Bsp13I TCCGGA 1 cut(s) 938
Bsp143I GATC 5 cut(s) 355, 648, 787, 1087, 1270
Bsp19I CCATGG 4 cut(s) 325, 348, 599, 1355
BspACI CCGC 8 cut(s) 38, 317, 436, 887, 1027, 1029, 1166, 1382
BspANI GGCC 3 cut(s) 315, 1125, 1237
BspCNI CTCAG 4 cut(s) 247, 481, 534, 865
BspEI TCCGGA 1 cut(s) 938
BspFNI CGCG 1 cut(s) 1029
BspLI GGNNCC 6 cut(s) 255, 549, 1001, 1236, 1304, 1305
BspPI GGATC 2 cut(s) 643, 782
BspQI GCTCTTC 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 310
BsrDI GCAATG 1 cut(s) 1059
BsrI ACTGG 1 cut(s) 934
BssECI CCNNGG 8 cut(s) 57, 325, 348, 396, 599, 1027, 1307, 1355
BssMI GATC 5 cut(s) 355, 648, 787, 1087, 1270
BssNAI GTATAC 1 cut(s) 772
BssT1I CCWWGG 6 cut(s) 57, 325, 348, 396, 599, 1355
Bst1107I GTATAC 1 cut(s) 772
Bst2UI CCWGG 3 cut(s) 427, 1127, 1309
Bst4CI ACNGT 3 cut(s) 369, 584, 1417
Bst6I CTCTTC 2 cut(s) 425, 758
BstBAI YACGTR 1 cut(s) 269
BstC8I GCNNGC 4 cut(s) 23, 48, 317, 1327
BstDEI CTNAG 8 cut(s) 117, 234, 489, 542, 682, 873, 1140, 1182
BstDSI CCRYGG 5 cut(s) 325, 348, 599, 1027, 1355
BstENI CCTNNNNNAGG 1 cut(s) 430
BstF5I GGATG 4 cut(s) 11, 609, 1095, 1150
BstFNI CGCG 1 cut(s) 1029
BstH2I RGCGCY 2 cut(s) 53, 111
BstHHI GCGC 2 cut(s) 52, 110
BstKTI GATC 5 cut(s) 358, 651, 790, 1090, 1273
BstMAI GTCTC 4 cut(s) 225, 256, 310, 434
BstMBI GATC 5 cut(s) 355, 648, 787, 1087, 1270
BstMWI GCNNNNNNNGC 3 cut(s) 461, 1078, 1289
BstNI CCWGG 3 cut(s) 427, 1127, 1309
BstNSI RCATGY 1 cut(s) 855
BstSCI CCNGG 3 cut(s) 425, 1125, 1307
BstSFI CTRYAG 3 cut(s) 182, 247, 1297
BstSNI TACGTA 1 cut(s) 269
BstUI CGCG 1 cut(s) 1029
BstV1I GCAGC 1 cut(s) 30
BstX2I RGATCY 1 cut(s) 648
BstYI RGATCY 1 cut(s) 648
BstZ17I GTATAC 1 cut(s) 772
BsuRI GGCC 3 cut(s) 315, 1125, 1237
BtgI CCRYGG 5 cut(s) 325, 348, 599, 1027, 1355
BtgZI GCGATG 1 cut(s) 975
BtsCI GGATG 4 cut(s) 11, 609, 1095, 1150
BtsI GCAGTG 1 cut(s) 1079
BtsIMutI CAGTG 3 cut(s) 242, 1079, 1422
Cac8I GCNNGC 4 cut(s) 23, 48, 317, 1327
CfoI GCGC 2 cut(s) 52, 110
Cfr13I GGNCC 5 cut(s) 314, 393, 1000, 1235, 1303
Cfr42I CCGCGG 1 cut(s) 1030
CseI GACGC 1 cut(s) 1289
Csp6I GTAC 1 cut(s) 7
CviAII CATG 7 cut(s) 74, 326, 349, 406, 600, 852, 1356
CviQI GTAC 1 cut(s) 7
DdeI CTNAG 8 cut(s) 117, 234, 489, 542, 682, 873, 1140, 1182
DpnI GATC 5 cut(s) 357, 650, 789, 1089, 1272
DpnII GATC 5 cut(s) 355, 648, 787, 1087, 1270
Eam1104I CTCTTC 2 cut(s) 425, 758
EarI CTCTTC 2 cut(s) 425, 758
Ecl136II GAGCTC 2 cut(s) 535, 1081
Eco105I TACGTA 1 cut(s) 269
Eco130I CCWWGG 6 cut(s) 57, 325, 348, 396, 599, 1355
Eco24I GRGCYC 2 cut(s) 537, 1083
Eco31I GGTCTC 1 cut(s) 310
Eco47I GGWCC 3 cut(s) 393, 1000, 1303
Eco53kI GAGCTC 2 cut(s) 535, 1081
Eco88I CYCGRG 2 cut(s) 809, 1231
EcoICRI GAGCTC 2 cut(s) 535, 1081
EcoNI CCTNNNNNAGG 1 cut(s) 430
EcoO109I RGGNCCY 3 cut(s) 1000, 1235, 1303
EcoRII CCWGG 3 cut(s) 425, 1125, 1307
EcoT14I CCWWGG 6 cut(s) 57, 325, 348, 396, 599, 1355
EcoT22I ATGCAT 1 cut(s) 1294
EcoT38I GRGCYC 2 cut(s) 537, 1083
ErhI CCWWGG 6 cut(s) 57, 325, 348, 396, 599, 1355
FaeI CATG 7 cut(s) 77, 329, 352, 409, 603, 855, 1359
FalI AAGNNNNNCTT 2 cut(s) 1313, 1345
FaqI GGGAC 3 cut(s) 44, 626, 1289
FatI CATG 7 cut(s) 73, 325, 348, 405, 599, 851, 1355
FauI CCCGC 4 cut(s) 324, 429, 1022, 1159
FauNDI CATATG 3 cut(s) 149, 622, 784
FbaI TGATCA 1 cut(s) 1087
FblI GTMKAC 1 cut(s) 771
Fnu4HI GCNGC 2 cut(s) 19, 1383
FokI GGATG 3 cut(s) 616, 1082, 1157
FriOI GRGCYC 2 cut(s) 537, 1083
Fsp4HI GCNGC 2 cut(s) 19, 1383
FspBI CTAG 3 cut(s) 111, 341, 386
GlaI GCGC 2 cut(s) 51, 109
GluI GCNGC 2 cut(s) 19, 1383
HaeII RGCGCY 2 cut(s) 53, 111
HaeIII GGCC 3 cut(s) 315, 1125, 1237
HapII CCGG 4 cut(s) 15, 69, 939, 1190
HgaI GACGC 1 cut(s) 1289
HhaI GCGC 2 cut(s) 52, 110
Hin1II CATG 7 cut(s) 77, 329, 352, 409, 603, 855, 1359
Hin6I GCGC 2 cut(s) 50, 108
HinP1I GCGC 2 cut(s) 50, 108
HincII GTYRAC 2 cut(s) 580, 1035
HindII GTYRAC 2 cut(s) 580, 1035
HindIII AAGCTT 1 cut(s) 1327
HinfI GANTC 8 cut(s) 144, 515, 942, 1023, 1054, 1170, 1178, 1229
HpaII CCGG 4 cut(s) 15, 69, 939, 1190
HphI GGTGA 2 cut(s) 52, 314
Hpy166II GTNNAC 4 cut(s) 580, 772, 1035, 1150
Hpy188I TCNGA 6 cut(s) 198, 593, 648, 874, 1053, 1287
Hpy188III TCNNGA 7 cut(s) 386, 665, 710, 791, 898, 939, 1003
Hpy8I GTNNAC 4 cut(s) 580, 772, 1035, 1150
HpyAV CCTTC 4 cut(s) 277, 370, 879, 1315
HpyCH4III ACNGT 3 cut(s) 369, 584, 1417
HpyCH4IV ACGT 2 cut(s) 268, 1210
HpyCH4V TGCA 5 cut(s) 464, 565, 607, 920, 1292
HpyF10VI GCNNNNNNNGC 3 cut(s) 461, 1078, 1289
HpyF3I CTNAG 8 cut(s) 117, 234, 489, 542, 682, 873, 1140, 1182
HpySE526I ACGT 2 cut(s) 268, 1210
Hsp92II CATG 7 cut(s) 77, 329, 352, 409, 603, 855, 1359
HspAI GCGC 2 cut(s) 50, 108
KflI GGGWCCC 1 cut(s) 1303
Kpn2I TCCGGA 1 cut(s) 938
Ksp22I TGATCA 1 cut(s) 1087
KspI CCGCGG 1 cut(s) 1030
Kzo9I GATC 5 cut(s) 355, 648, 787, 1087, 1270
LguI GCTCTTC 1 cut(s) 758
LmnI GCTCC 2 cut(s) 540, 1086
Lsp1109I GCAGC 1 cut(s) 30
LweI GCATC 2 cut(s) 33, 594
MaeI CTAG 3 cut(s) 111, 341, 386
MaeII ACGT 2 cut(s) 268, 1210
MaeIII GTNAC 3 cut(s) 269, 1264, 1277
MalI GATC 5 cut(s) 357, 650, 789, 1089, 1272
MboI GATC 5 cut(s) 355, 648, 787, 1087, 1270
MboII GAAGA 7 cut(s) 365, 442, 494, 649, 775, 811, 814
MflI RGATCY 1 cut(s) 648
MhlI GDGCHC 5 cut(s) 99, 537, 1083, 1401, 1424
MluCI AATT 7 cut(s) 163, 471, 926, 986, 1008, 1041, 1219
MlyI GAGTC 4 cut(s) 138, 951, 1172, 1223
MmeI TCCRAC 1 cut(s) 189
MnlI CCTC 8 cut(s) 79, 243, 306, 403, 426, 537, 717, 857
Mph1103I ATGCAT 1 cut(s) 1294
MroI TCCGGA 1 cut(s) 938
MroXI GAANNNNTTC 1 cut(s) 504
MseI TTAA 2 cut(s) 905, 1161
MslI CAYNNNNRTG 2 cut(s) 327, 1104
MspA1I CMGCKG 1 cut(s) 1029
MspI CCGG 4 cut(s) 15, 69, 939, 1190
MspR9I CCNGG 3 cut(s) 427, 1127, 1309
Mva1269I GAATGC 1 cut(s) 1294
MvaI CCWGG 3 cut(s) 427, 1127, 1309
MvnI CGCG 1 cut(s) 1029
MwoI GCNNNNNNNGC 3 cut(s) 461, 1078, 1289
NcoI CCATGG 4 cut(s) 325, 348, 599, 1355
NdeI CATATG 3 cut(s) 149, 622, 784
NdeII GATC 5 cut(s) 355, 648, 787, 1087, 1270
NlaIII CATG 7 cut(s) 77, 329, 352, 409, 603, 855, 1359
NlaIV GGNNCC 6 cut(s) 255, 549, 1001, 1236, 1304, 1305
NmuCI GTSAC 1 cut(s) 1277
NsiI ATGCAT 1 cut(s) 1294
NspI RCATGY 1 cut(s) 855
OliI CACNNNNGTG 1 cut(s) 327
PaeR7I CTCGAG 1 cut(s) 809
PciI ACATGT 1 cut(s) 851
PciSI GCTCTTC 1 cut(s) 758
PctI GAATGC 1 cut(s) 1294
PdmI GAANNNNTTC 1 cut(s) 504
PfeI GAWTC 4 cut(s) 515, 1023, 1054, 1170
PflMI CCANNNNNTGG 1 cut(s) 1361
PkrI GCNGC 2 cut(s) 20, 1384
PleI GAGTC 4 cut(s) 138, 950, 1172, 1223
PpsI GAGTC 4 cut(s) 138, 950, 1172, 1223
Ppu21I YACGTR 1 cut(s) 269
PpuMI RGGWCCY 2 cut(s) 1000, 1303
PscI ACATGT 1 cut(s) 851
Psp124BI GAGCTC 2 cut(s) 537, 1083
Psp5II RGGWCCY 2 cut(s) 1000, 1303
Psp6I CCWGG 3 cut(s) 425, 1125, 1307
PspGI CCWGG 3 cut(s) 425, 1125, 1307
PspN4I GGNNCC 6 cut(s) 255, 549, 1001, 1236, 1304, 1305
PspPI GGNCC 5 cut(s) 314, 393, 1000, 1235, 1303
PspPPI RGGWCCY 2 cut(s) 1000, 1303
PspXI VCTCGAGB 1 cut(s) 809
PsuI RGATCY 1 cut(s) 648
RsaI GTAC 1 cut(s) 8
RsaNI GTAC 1 cut(s) 7
RseI CAYNNNNRTG 2 cut(s) 327, 1104
SacI GAGCTC 2 cut(s) 537, 1083
SacII CCGCGG 1 cut(s) 1030
SapI GCTCTTC 1 cut(s) 758
SaqAI TTAA 2 cut(s) 905, 1161
SatI GCNGC 2 cut(s) 19, 1383
Sau3AI GATC 5 cut(s) 355, 648, 787, 1087, 1270
Sau96I GGNCC 5 cut(s) 314, 393, 1000, 1235, 1303
SchI GAGTC 4 cut(s) 138, 951, 1172, 1223
ScrFI CCNGG 3 cut(s) 427, 1127, 1309
SduI GDGCHC 5 cut(s) 99, 537, 1083, 1401, 1424
SfaNI GCATC 2 cut(s) 33, 594
SfcI CTRYAG 3 cut(s) 182, 247, 1297
Sfr274I CTCGAG 1 cut(s) 809
Sfr303I CCGCGG 1 cut(s) 1030
SgrBI CCGCGG 1 cut(s) 1030
SinI GGWCC 3 cut(s) 393, 1000, 1303
SlaI CTCGAG 1 cut(s) 809
SmiMI CAYNNNNRTG 2 cut(s) 327, 1104
SmlI CTYRAG 5 cut(s) 297, 665, 809, 896, 1018
SmoI CTYRAG 5 cut(s) 297, 665, 809, 896, 1018
SnaBI TACGTA 1 cut(s) 269
Sse9I AATT 7 cut(s) 163, 471, 926, 986, 1008, 1041, 1219
SsiI CCGC 8 cut(s) 38, 317, 436, 887, 1027, 1029, 1166, 1382
SspMI CTAG 3 cut(s) 111, 341, 386
SstI GAGCTC 2 cut(s) 537, 1083
StyD4I CCNGG 3 cut(s) 425, 1125, 1307
StyI CCWWGG 6 cut(s) 57, 325, 348, 396, 599, 1355
TaaI ACNGT 3 cut(s) 369, 584, 1417
TaiI ACGT 2 cut(s) 271, 1213
TaqI TCGA 2 cut(s) 810, 859
TasI AATT 7 cut(s) 163, 471, 926, 986, 1008, 1041, 1219
TauI GCSGC 1 cut(s) 1385
TfiI GAWTC 4 cut(s) 515, 1023, 1054, 1170
Tru1I TTAA 2 cut(s) 905, 1161
Tru9I TTAA 2 cut(s) 905, 1161
TscAI CASTG 3 cut(s) 242, 1079, 1422
TseFI GTSAC 1 cut(s) 1277
TseI GCWGC 1 cut(s) 18
Tsp45I GTSAC 1 cut(s) 1277
TspDTI ATGAA 6 cut(s) 17, 90, 514, 649, 812, 1102
TspGWI ACGGA 3 cut(s) 406, 440, 1073
TspRI CASTG 3 cut(s) 242, 1079, 1422
Van91I CCANNNNNTGG 1 cut(s) 1361
VpaK11BI GGWCC 3 cut(s) 393, 1000, 1303
XagI CCTNNNNNAGG 1 cut(s) 430
XapI RAATTY 3 cut(s) 986, 1008, 1041
XbaI TCTAGA 1 cut(s) 385
XceI RCATGY 1 cut(s) 855
XcmI CCANNNNNNNNNTGG 1 cut(s) 403
XhoI CTCGAG 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 771
XmnI GAANNNNTTC 1 cut(s) 504
XspI CTAG 3 cut(s) 111, 341, 386
Zsp2I ATGCAT 1 cut(s) 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.