Prupe.1G477900_v2.0.a1

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000131
Physical Location & Seq
Reverse (-)
40024146 .. 40026388
2243 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G477900.1

Sequence Viewer

Length: 1356 bp
ATGGAATTAATCAATCATGATCCATTAGTAACTTCAATGAGTGAGGTGTTGGACAGATTGCCTCCCCTGTCCCCTTCATGTTGCATCTACAGAGTTCCTAAGCGATTACGGCGCGTAAGTGAACAAGCCTACACGCCTCAGGTTGTGTCTATAGGCCCCCTTCACCATGGAAAAGAAGCCCTGAAAGCCATGGAAGAGCTTAAAAATAGGTACCTACAAGATTTTTTACGTCGGACCAATGTAAGTTTGGAATATTTTATAAAGAAAATAAGGGCCCAAGAAGCAAAACTGCGCAGTTGTTATGCAGAGACCATTGGGTTTAGCCGCGATGAATTTGTAAGAATCATTCTGGTGGATGCGGCCTTCATCATCGAGGTCTTGTTGAGGTTCTGTTACAAGCATTTGCGGGTTGAGAATGATCGTATATTTAACCAACCAAGGATGTTGGAGGATGTATGGCCTGACATGCGGATGCTTGAAAATCAGCTGCCTTTCTTCATTCTTGAGGATCTTTTCGATCATGAAAGAAATATAGTTGGCATCCAGACGACAATTATTGATCTTTCTTACCATTTCTTCAAAACTCTAATGCATATGAAGGACATGGAAGACACTTTGACCCGGATACGTCCTCCTCATCAGGTAGAGCATTTTGTTGATTTTGTTAGAAAGTTATATCCATTGCCTCCACAATTAAAATCGAAAGTGCCACAAGTTCAAGAACCATTCCAAACCCTAACCATAGGCATGATGTCATCATGTGTAATGGATGTACCACAAGCTCGAGGGCAACTTGAAACCCAAACCATACCGAGCATGACACAGTTATACCGAGCAGGGGTCAAGTTTAAGAAGGGGTCAAGCACAAACATATTCGACATTCGGTTCAATATTGACGATGGCATTTTGGAAATTCCAAAAATAACAATAAGTGATCAATCAGAGGTCACACTCACAAATCTCCTTGTCTTTGAACAAACCCTATGCAAGAAGGTAGAAAATTACATAAATGATTATGTTGTCATCTTAAACATTCTTGTGAACACCCCGGAGGACGTGGCGTTGCTTGTTAAGAATGGAATTGTTGAAAACAAGCTAGGTGACAGCACTAAAGCCTGTACTACGATCAAGAACCTTGCTGACGGCGTCATTATGGCCGATGAGTTCTACTTCACCACTCTTTGTGAAAACCTGAACAAGTACTACAGAATGTTTAGGCACAGATGGAAGGAATATTTGGTAAAACATTTCTTCAACTCACCTTGGACAACTAAGGAAATTGTTGCAGCTGCTATTTTCCTTATGCTCACTTTCGTACAGACGGTGTGCTCTATTATCTCTGCTGCGCAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

452

Amino Acids

52.55

Weight (kDa)

7.15

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 260
Acc16I TGCGCA 2 cut(s) 293, 1347
Acc65I GGTACC 1 cut(s) 210
AccB1I GGYRCC 1 cut(s) 210
AccII CGCG 2 cut(s) 114, 327
AciI CCGC 4 cut(s) 325, 359, 406, 469
AclWI GGATC 2 cut(s) 14, 516
AcoI YGGCCR 1 cut(s) 1155
AcsI RAATTY 2 cut(s) 332, 912
AcyI GRCGYC 1 cut(s) 1146
AfaI GTAC 5 cut(s) 212, 774, 1120, 1202, 1317
AfiI CCNNNNNNNGG 1 cut(s) 838
AgsI TTSAA 9 cut(s) 36, 479, 580, 719, 797, 889, 974, 1088, 1255
AjiI CACGTC 1 cut(s) 1057
AjuI GAANNNNNNNTTGG 2 cut(s) 1220, 1252
AluBI AGCT 5 cut(s) 199, 487, 782, 1096, 1289
AluI AGCT 5 cut(s) 199, 487, 782, 1096, 1289
Alw21I GWGCWC 1 cut(s) 1331
Alw26I GTCTC 1 cut(s) 302
AlwI GGATC 2 cut(s) 14, 516
Ama87I CYCGRG 1 cut(s) 783
AoxI GGCC 5 cut(s) 154, 273, 360, 458, 1155
ApaI GGGCCC 1 cut(s) 277
ApeKI GCWGC 4 cut(s) 487, 1286, 1289, 1343
ApoI RAATTY 2 cut(s) 332, 912
AseI ATTAAT 1 cut(s) 8
Asp718I GGTACC 1 cut(s) 210
AspLEI GCGC 3 cut(s) 114, 294, 1348
AspS9I GGNCC 4 cut(s) 155, 234, 273, 274
AsuC2I CCSGG 2 cut(s) 622, 1049
AsuHPI GGTGA 4 cut(s) 155, 1112, 1165, 1251
AvaI CYCGRG 1 cut(s) 783
AvaII GGWCC 1 cut(s) 234
AxyI CCTNAGG 1 cut(s) 138
BaeGI GKGCMC 1 cut(s) 277
BanI GGYRCC 1 cut(s) 210
BanII GRGCYC 1 cut(s) 277
BbsI GAAGAC 1 cut(s) 615
Bbv12I GWGCWC 1 cut(s) 1331
BbvI GCAGC 4 cut(s) 474, 1276, 1298, 1330
BccI CCATC 2 cut(s) 893, 1218
BceAI ACGGC 2 cut(s) 125, 1159
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 1 cut(s) 934
BcnI CCSGG 2 cut(s) 622, 1049
BcoDI GTCTC 1 cut(s) 302
BfaI CTAG 1 cut(s) 1097
BfmI CTRYAG 3 cut(s) 88, 150, 1204
BfuI GTATCC 1 cut(s) 618
BisI GCNGC 6 cut(s) 325, 360, 488, 1287, 1290, 1344
BlsI GCNGC 6 cut(s) 326, 361, 489, 1288, 1291, 1345
BmcAI AGTACT 1 cut(s) 1202
Bme1390I CCNGG 2 cut(s) 622, 1049
Bme18I GGWCC 1 cut(s) 234
BmeT110I CYCGRG 1 cut(s) 783
BmgBI CACGTC 1 cut(s) 1057
BmgT120I GGNCC 4 cut(s) 155, 234, 273, 274
BmiI GGNNCC 3 cut(s) 157, 212, 275
BmrFI CCNGG 2 cut(s) 622, 1049
BmsI GCATC 4 cut(s) 93, 346, 462, 549
BpiI GAAGAC 1 cut(s) 615
Bpu10I CCTNAGC 1 cut(s) 99
BpuEI CTTGAG 1 cut(s) 524
BpuMI CCSGG 2 cut(s) 622, 1049
BsaHI GRCGYC 1 cut(s) 1146
BsaI GGTCTC 1 cut(s) 302
BsaJI CCNNGG 5 cut(s) 166, 189, 437, 1047, 1262
Bsc4I CCNNNNNNNGG 1 cut(s) 838
Bse21I CCTNAGG 1 cut(s) 138
Bse3DI GCAATG 1 cut(s) 680
BseDI CCNNGG 5 cut(s) 166, 189, 437, 1047, 1262
BseGI GGATG 6 cut(s) 361, 447, 457, 477, 540, 775
BseLI CCNNNNNNNGG 1 cut(s) 838
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 1 cut(s) 152
BseRI GAGGAG 1 cut(s) 624
BseSI GKGCMC 1 cut(s) 277
BseXI GCAGC 4 cut(s) 474, 1276, 1298, 1330
Bsh1236I CGCG 2 cut(s) 114, 327
BshFI GGCC 5 cut(s) 156, 275, 362, 460, 1157
BshNI GGYRCC 1 cut(s) 210
BsiHKAI GWGCWC 1 cut(s) 1331
BsiHKCI CYCGRG 1 cut(s) 783
BsiSI CCGG 2 cut(s) 622, 1049
BslFI GGGAC 1 cut(s) 55
BslI CCNNNNNNNGG 1 cut(s) 838
BsmAI GTCTC 1 cut(s) 302
BsmFI GGGAC 1 cut(s) 55
BsnI GGCC 5 cut(s) 156, 275, 362, 460, 1157
Bso31I GGTCTC 1 cut(s) 302
BsoBI CYCGRG 1 cut(s) 783
Bsp120I GGGCCC 1 cut(s) 273
Bsp1286I GDGCHC 2 cut(s) 277, 1331
Bsp143I GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
Bsp19I CCATGG 2 cut(s) 166, 189
BspACI CCGC 4 cut(s) 325, 359, 406, 469
BspANI GGCC 5 cut(s) 156, 275, 362, 460, 1157
BspCNI CTCAG 1 cut(s) 151
BspFNI CGCG 2 cut(s) 114, 327
BspHI TCATGA 2 cut(s) 16, 520
BspLI GGNNCC 3 cut(s) 157, 212, 275
BspPI GGATC 2 cut(s) 14, 516
BspQI GCTCTTC 1 cut(s) 189
BspT107I GGYRCC 1 cut(s) 210
BspTNI GGTCTC 1 cut(s) 302
BsrDI GCAATG 1 cut(s) 680
BssECI CCNNGG 5 cut(s) 166, 189, 437, 1047, 1262
BssMI GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
BssNI GRCGYC 1 cut(s) 1146
BssT1I CCWWGG 4 cut(s) 166, 189, 437, 1262
Bst4CI ACNGT 2 cut(s) 825, 1324
Bst6I CTCTTC 1 cut(s) 189
BstACI GRCGYC 1 cut(s) 1146
BstDEI CTNAG 3 cut(s) 99, 138, 1272
BstDSI CCRYGG 2 cut(s) 166, 189
BstF5I GGATG 6 cut(s) 361, 447, 457, 477, 540, 775
BstFNI CGCG 2 cut(s) 114, 327
BstHHI GCGC 3 cut(s) 114, 294, 1348
BstKTI GATC 7 cut(s) 22, 421, 511, 520, 562, 937, 1128
BstMAI GTCTC 1 cut(s) 302
BstMBI GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
BstMWI GCNNNNNNNGC 4 cut(s) 109, 185, 281, 466
BstNSI RCATGY 1 cut(s) 469
BstSCI CCNGG 2 cut(s) 620, 1047
BstSFI CTRYAG 3 cut(s) 88, 150, 1204
BstSLI GKGCMC 1 cut(s) 277
BstUI CGCG 2 cut(s) 114, 327
BstV1I GCAGC 4 cut(s) 474, 1276, 1298, 1330
BstV2I GAAGAC 1 cut(s) 615
BstX2I RGATCY 1 cut(s) 508
BstYI RGATCY 1 cut(s) 508
Bsu36I CCTNAGG 1 cut(s) 138
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 5 cut(s) 156, 275, 362, 460, 1157
BtgI CCRYGG 2 cut(s) 166, 189
BtgZI GCGATG 1 cut(s) 342
BtrI CACGTC 1 cut(s) 1057
BtsCI GGATG 6 cut(s) 361, 447, 457, 477, 540, 775
CciI TCATGA 2 cut(s) 16, 520
CfoI GCGC 3 cut(s) 114, 294, 1348
Cfr13I GGNCC 4 cut(s) 155, 234, 273, 274
CseI GACGC 1 cut(s) 1135
Csp6I GTAC 5 cut(s) 211, 773, 1119, 1201, 1316
CviQI GTAC 5 cut(s) 211, 773, 1119, 1201, 1316
DdeI CTNAG 3 cut(s) 99, 138, 1272
DpnI GATC 7 cut(s) 21, 420, 510, 519, 561, 936, 1127
DpnII GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
EaeI YGGCCR 1 cut(s) 1155
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
Eco130I CCWWGG 4 cut(s) 166, 189, 437, 1262
Eco24I GRGCYC 1 cut(s) 277
Eco31I GGTCTC 1 cut(s) 302
Eco47I GGWCC 1 cut(s) 234
Eco81I CCTNAGG 1 cut(s) 138
Eco88I CYCGRG 1 cut(s) 783
EcoO109I RGGNCCY 2 cut(s) 155, 273
EcoT14I CCWWGG 4 cut(s) 166, 189, 437, 1262
EcoT22I ATGCAT 1 cut(s) 594
EcoT38I GRGCYC 1 cut(s) 277
ErhI CCWWGG 4 cut(s) 166, 189, 437, 1262
FaqI GGGAC 1 cut(s) 55
FauI CCCGC 1 cut(s) 399
FauNDI CATATG 1 cut(s) 594
FbaI TGATCA 1 cut(s) 934
Fnu4HI GCNGC 6 cut(s) 325, 360, 488, 1287, 1290, 1344
FokI GGATG 6 cut(s) 368, 454, 464, 484, 527, 782
FriOI GRGCYC 1 cut(s) 277
Fsp4HI GCNGC 6 cut(s) 325, 360, 488, 1287, 1290, 1344
FspBI CTAG 1 cut(s) 1097
FspI TGCGCA 2 cut(s) 293, 1347
GlaI GCGC 3 cut(s) 113, 293, 1347
GluI GCNGC 6 cut(s) 325, 360, 488, 1287, 1290, 1344
HaeIII GGCC 5 cut(s) 156, 275, 362, 460, 1157
HapII CCGG 2 cut(s) 622, 1049
HgaI GACGC 1 cut(s) 1135
HhaI GCGC 3 cut(s) 114, 294, 1348
Hin1I GRCGYC 1 cut(s) 1146
Hin6I GCGC 3 cut(s) 112, 292, 1346
HinP1I GCGC 3 cut(s) 112, 292, 1346
HinfI GANTC 1 cut(s) 342
HpaII CCGG 2 cut(s) 622, 1049
HphI GGTGA 4 cut(s) 155, 1112, 1165, 1251
Hpy166II GTNNAC 2 cut(s) 122, 1042
Hpy188I TCNGA 2 cut(s) 234, 943
Hpy188III TCNNGA 6 cut(s) 17, 503, 521, 544, 719, 1129
Hpy8I GTNNAC 2 cut(s) 122, 1042
Hpy99I CGWCG 1 cut(s) 234
HpyAV CCTTC 7 cut(s) 84, 170, 373, 592, 847, 985, 1222
HpyCH4III ACNGT 2 cut(s) 825, 1324
HpyCH4IV ACGT 3 cut(s) 229, 628, 1056
HpyCH4V TGCA 5 cut(s) 84, 305, 592, 987, 1286
HpyF10VI GCNNNNNNNGC 4 cut(s) 109, 185, 281, 466
HpyF3I CTNAG 3 cut(s) 99, 138, 1272
HpySE526I ACGT 3 cut(s) 229, 628, 1056
Hsp92I GRCGYC 1 cut(s) 1146
HspAI GCGC 3 cut(s) 112, 292, 1346
KpnI GGTACC 1 cut(s) 214
Ksp22I TGATCA 1 cut(s) 934
Kzo9I GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
LguI GCTCTTC 1 cut(s) 189
Lsp1109I GCAGC 4 cut(s) 474, 1276, 1298, 1330
LweI GCATC 4 cut(s) 93, 346, 462, 549
MaeI CTAG 1 cut(s) 1097
MaeII ACGT 3 cut(s) 229, 628, 1056
MaeIII GTNAC 4 cut(s) 28, 392, 946, 1100
MalI GATC 7 cut(s) 21, 420, 510, 519, 561, 936, 1127
MboI GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
MboII GAAGA 5 cut(s) 206, 487, 568, 620, 1243
MflI RGATCY 1 cut(s) 508
MhlI GDGCHC 2 cut(s) 277, 1331
MluCI AATT 8 cut(s) 5, 332, 552, 692, 912, 1000, 1080, 1278
MmeI TCCRAC 3 cut(s) 30, 212, 426
Mph1103I ATGCAT 1 cut(s) 594
MseI TTAA 7 cut(s) 8, 201, 429, 695, 849, 1028, 1071
MslI CAYNNNNRTG 4 cut(s) 350, 470, 746, 1037
MspA1I CMGCKG 2 cut(s) 487, 1289
MspI CCGG 2 cut(s) 622, 1049
MspR9I CCNGG 2 cut(s) 622, 1049
MvnI CGCG 2 cut(s) 114, 327
MwoI GCNNNNNNNGC 4 cut(s) 109, 185, 281, 466
NciI CCSGG 2 cut(s) 622, 1049
NcoI CCATGG 2 cut(s) 166, 189
NdeI CATATG 1 cut(s) 594
NdeII GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
NlaIV GGNNCC 3 cut(s) 157, 212, 275
NmuCI GTSAC 2 cut(s) 946, 1100
NsbI TGCGCA 2 cut(s) 293, 1347
NsiI ATGCAT 1 cut(s) 594
NspI RCATGY 1 cut(s) 469
PaeR7I CTCGAG 1 cut(s) 783
PagI TCATGA 2 cut(s) 16, 520
PciSI GCTCTTC 1 cut(s) 189
PfeI GAWTC 1 cut(s) 342
PflFI GACNNNGTC 1 cut(s) 1145
PkrI GCNGC 6 cut(s) 326, 361, 489, 1288, 1291, 1345
PshBI ATTAAT 1 cut(s) 8
PsiI TTATAA 1 cut(s) 260
PspN4I GGNNCC 3 cut(s) 157, 212, 275
PspOMI GGGCCC 1 cut(s) 273
PspPI GGNCC 4 cut(s) 155, 234, 273, 274
PspXI VCTCGAGB 1 cut(s) 783
PsrI GAACNNNNNNTAC 2 cut(s) 1187, 1219
PsuI RGATCY 1 cut(s) 508
PsyI GACNNNGTC 1 cut(s) 1145
PvuII CAGCTG 2 cut(s) 487, 1289
RsaI GTAC 5 cut(s) 212, 774, 1120, 1202, 1317
RsaNI GTAC 5 cut(s) 211, 773, 1119, 1201, 1316
RseI CAYNNNNRTG 4 cut(s) 350, 470, 746, 1037
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 7 cut(s) 8, 201, 429, 695, 849, 1028, 1071
SatI GCNGC 6 cut(s) 325, 360, 488, 1287, 1290, 1344
Sau3AI GATC 7 cut(s) 19, 418, 508, 517, 559, 934, 1125
Sau96I GGNCC 4 cut(s) 155, 234, 273, 274
ScaI AGTACT 1 cut(s) 1202
ScrFI CCNGG 2 cut(s) 622, 1049
SduI GDGCHC 2 cut(s) 277, 1331
SfaNI GCATC 4 cut(s) 93, 346, 462, 549
SfcI CTRYAG 3 cut(s) 88, 150, 1204
Sfr274I CTCGAG 1 cut(s) 783
SinI GGWCC 1 cut(s) 234
SlaI CTCGAG 1 cut(s) 783
SmiMI CAYNNNNRTG 4 cut(s) 350, 470, 746, 1037
SmlI CTYRAG 2 cut(s) 503, 783
SmoI CTYRAG 2 cut(s) 503, 783
Sse9I AATT 8 cut(s) 5, 332, 552, 692, 912, 1000, 1080, 1278
SsiI CCGC 4 cut(s) 325, 359, 406, 469
SspI AATATT 3 cut(s) 254, 892, 1235
SspMI CTAG 1 cut(s) 1097
StyD4I CCNGG 2 cut(s) 620, 1047
StyI CCWWGG 4 cut(s) 166, 189, 437, 1262
TaaI ACNGT 2 cut(s) 825, 1324
TaiI ACGT 3 cut(s) 232, 631, 1059
TaqI TCGA 5 cut(s) 372, 516, 701, 784, 876
TasI AATT 8 cut(s) 5, 332, 552, 692, 912, 1000, 1080, 1278
TatI WGTACW 2 cut(s) 1118, 1200
TauI GCSGC 2 cut(s) 327, 362
TfiI GAWTC 1 cut(s) 342
Tru1I TTAA 7 cut(s) 8, 201, 429, 695, 849, 1028, 1071
Tru9I TTAA 7 cut(s) 8, 201, 429, 695, 849, 1028, 1071
TseFI GTSAC 2 cut(s) 946, 1100
TseI GCWGC 4 cut(s) 487, 1286, 1289, 1343
Tsp45I GTSAC 2 cut(s) 946, 1100
TspDTI ATGAA 6 cut(s) 66, 345, 355, 487, 537, 611
Tth111I GACNNNGTC 1 cut(s) 1145
VpaK11BI GGWCC 1 cut(s) 234
VspI ATTAAT 1 cut(s) 8
XapI RAATTY 2 cut(s) 332, 912
XceI RCATGY 1 cut(s) 469
XcmI CCANNNNNNNNNTGG 1 cut(s) 244
XhoI CTCGAG 1 cut(s) 783
XspI CTAG 1 cut(s) 1097
ZrmI AGTACT 1 cut(s) 1202
Zsp2I ATGCAT 1 cut(s) 594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.