MD07G1131600.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000131
Physical Location & Seq
Reverse (-)
18997628 .. 18998962
1335 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1131600.v1.1.491

Sequence Viewer

Length: 1335 bp
ATGAAATATTTGAATCAATGTTGGAAAAAAAAAATATTTGAATCAATGCAGTTAAGGATCTCAGGCGGTGAAATGAAAGGAATCACTGAAGCTCCACACTACATAGAAAACGAAAAGGATCCAGTCCTCAAGGAGTTGCGGAGCTTGAATCCCCTGTCTTCCTGGCGGTGTATCTATAGAGTTCCTAAGCGACTACGGCAAGGAAATGAGAAGGCATATACACCTCAAGTAGTCTCTATAGGCCCACTTCACCATGGCGAGGAACCCTTAAAAGGCATGGAAGAGCACAAATTAAGGTACCTGCGAAGTTTTCTAGATCGAACCGGGGTAAGCTTTTGTGATTATATACAAATGATAAAGAACCAAGAGGGAAGGTTGCGAGGTTTTTATGCAGAATCCGTTGAGTTTGGCAGTGATGAATTTGTAAGAATTGTTTTAGTGGATGCCGCCTTTGTCATTGAGCTCTTATTGAGGTACTATGACAAAAAATATGGAGGTGAAGATGATTACATATTTAACAACCCTAGGATGTTGTGGGATGTGCGTCCAGACTTGCGGTTGATTGAAAATCAGCTGCCATTCTTCATTCTTCAGGATCTTTTCAGATTTTTTTCTTCTTCTTCTCTTTCGTTACTTGATATTTCCCACAAATTTTTCAAAGGCGAAATTGATAGCAAGGGAAAAGAAGAGAATTTTAAAAATATTTCTAATGGAGATGTACAACATTTTGTTGATCTGATAAGAATTCTATACGGACAGTTGAAATCAAAAACTAGAGCTAACATCACAGTCACAGACACACCCAACGTGACAGAGCTACACCAGGCTGGAGTCAAGTTTAAGGAAGGAAAAGGCAGCAGCTTATTTGACATAAAATTCTCGCATGGGATCCTCGAAATTCCAAAGTTAACAGTGGACGATACCACAGAGCTGACACTCAGAAATCTCCTTGCTTTTGAACAATGCCATCGCAGAGAGGAGGATTACCTAGCTAATTATGTTTTCCTTATGAAGCGTCTCGTGAAAACCCCTGAGGATGTGCAATTGCTTGTTGATAAGGAAATCATTGATAATTGGCTAGGTGATACCCATAAGATATCTACTTTGCTTCATGACCTTGGCACCGGGATGATGGTTGACCACCACTACTATGCCCCTCTTTGTAAAGAGCTGAAAGATTACCGCGAAAAGCTCTGGCACGGATGGATGGTAATTTTGAAACAAAATTATTTTAACACGCCTTGGGCCAGTATTTCTGTTGTTGCTGCTGTTATTCTCCTCATACTCACTGTCATACAAACAGCGTGCTCTTACAAATCTGTCCCGCTCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

445

Amino Acids

51.78

Weight (kDa)

7.23

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 58 - 429 9.7e-117 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 309
Acc65I GGTACC 1 cut(s) 297
AccB1I GGYRCC 2 cut(s) 297, 1121
AccBSI CCGCTC 1 cut(s) 1327
AccII CGCG 1 cut(s) 1185
AciI CCGC 7 cut(s) 66, 139, 166, 447, 556, 1183, 1325
AclWI GGATC 6 cut(s) 65, 113, 126, 603, 883, 896
AcsI RAATTY 6 cut(s) 419, 650, 691, 744, 875, 897
AcuI CTGAAG 2 cut(s) 108, 575
AfaI GTAC 3 cut(s) 299, 476, 720
AfiI CCNNNNNNNGG 2 cut(s) 259, 272
AgsI TTSAA 8 cut(s) 13, 41, 148, 566, 658, 763, 959, 1219
AjnI CCWGG 2 cut(s) 161, 822
Alw21I GWGCWC 3 cut(s) 288, 465, 1310
Alw26I GTCTC 2 cut(s) 238, 1022
AlwI GGATC 6 cut(s) 65, 113, 126, 603, 883, 896
AoxI GGCC 2 cut(s) 241, 1245
ApeKI GCWGC 4 cut(s) 574, 855, 858, 1265
ApoI RAATTY 6 cut(s) 419, 650, 691, 744, 875, 897
Asp718I GGTACC 1 cut(s) 297
AspA2I CCTAGG 1 cut(s) 524
AspS9I GGNCC 2 cut(s) 242, 1245
AsuC2I CCSGG 2 cut(s) 325, 1126
AsuHPI GGTGA 4 cut(s) 80, 242, 509, 1094
AvrII CCTAGG 1 cut(s) 524
AxyI CCTNAGG 1 cut(s) 1032
BamHI GGATCC 2 cut(s) 118, 888
BanI GGYRCC 2 cut(s) 297, 1121
BanII GRGCYC 1 cut(s) 465
BauI CACGAG 1 cut(s) 1019
BbsI GAAGAC 1 cut(s) 150
Bbv12I GWGCWC 3 cut(s) 288, 465, 1310
BbvI GCAGC 4 cut(s) 561, 867, 870, 1252
BccI CCATC 4 cut(s) 975, 1126, 1197, 1201
BceAI ACGGC 1 cut(s) 212
BciT130I CCWGG 2 cut(s) 163, 824
BcnI CCSGG 2 cut(s) 325, 1126
BcoDI GTCTC 2 cut(s) 238, 1022
BfaI CTAG 5 cut(s) 314, 525, 774, 989, 1079
BfmI CTRYAG 2 cut(s) 175, 237
BfuAI ACCTGC 1 cut(s) 309
BisI GCNGC 5 cut(s) 447, 575, 856, 859, 1266
BlnI CCTAGG 1 cut(s) 524
BlsI GCNGC 5 cut(s) 448, 576, 857, 860, 1267
Bme1390I CCNGG 4 cut(s) 163, 325, 824, 1126
BmgT120I GGNCC 2 cut(s) 242, 1245
BmiI GGNNCC 5 cut(s) 120, 264, 299, 890, 1123
BmrFI CCNGG 4 cut(s) 163, 325, 824, 1126
BmsI GCATC 1 cut(s) 433
BpiI GAAGAC 1 cut(s) 150
BpmI CTGGAG 1 cut(s) 849
Bpu10I CCTNAGC 1 cut(s) 186
BpuEI CTTGAG 2 cut(s) 113, 210
BpuMI CCSGG 2 cut(s) 325, 1126
BsaJI CCNNGG 5 cut(s) 253, 324, 524, 1117, 1241
BsaXI ACNNNNNCTCC 2 cut(s) 76, 106
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 272
Bse1I ACTGG 2 cut(s) 122, 1248
Bse21I CCTNAGG 1 cut(s) 1032
BseBI CCWGG 2 cut(s) 163, 824
BseDI CCNNGG 5 cut(s) 253, 324, 524, 1117, 1241
BseGI GGATG 7 cut(s) 448, 534, 544, 1042, 1134, 1208, 1212
BseLI CCNNNNNNNGG 2 cut(s) 259, 272
BseMII CTCAG 3 cut(s) 75, 952, 1023
BseNI ACTGG 2 cut(s) 122, 1248
BseRI GAGGAG 2 cut(s) 992, 1268
BseXI GCAGC 4 cut(s) 561, 867, 870, 1252
Bsh1236I CGCG 1 cut(s) 1185
BshFI GGCC 2 cut(s) 243, 1247
BshNI GGYRCC 2 cut(s) 297, 1121
BsiHKAI GWGCWC 3 cut(s) 288, 465, 1310
BsiSI CCGG 2 cut(s) 324, 1125
BslFI GGGAC 1 cut(s) 1307
BslI CCNNNNNNNGG 2 cut(s) 259, 272
BsmAI GTCTC 2 cut(s) 238, 1022
BsmBI CGTCTC 1 cut(s) 1022
BsmFI GGGAC 1 cut(s) 1307
BsnI GGCC 2 cut(s) 243, 1247
Bsp1286I GDGCHC 3 cut(s) 288, 465, 1310
Bsp1407I TGTACA 1 cut(s) 718
Bsp143I GATC 6 cut(s) 57, 118, 316, 595, 733, 888
Bsp19I CCATGG 1 cut(s) 253
BspACI CCGC 7 cut(s) 66, 139, 166, 447, 556, 1183, 1325
BspANI GGCC 2 cut(s) 243, 1247
BspCNI CTCAG 3 cut(s) 74, 951, 1024
BspFNI CGCG 1 cut(s) 1185
BspHI TCATGA 1 cut(s) 1111
BspLI GGNNCC 5 cut(s) 120, 264, 299, 890, 1123
BspMI ACCTGC 1 cut(s) 309
BspPI GGATC 6 cut(s) 65, 113, 126, 603, 883, 896
BspQI GCTCTTC 1 cut(s) 276
BspT107I GGYRCC 2 cut(s) 297, 1121
BsrBI CCGCTC 1 cut(s) 1327
BsrGI TGTACA 1 cut(s) 718
BsrI ACTGG 2 cut(s) 122, 1248
BssECI CCNNGG 5 cut(s) 253, 324, 524, 1117, 1241
BssMI GATC 6 cut(s) 57, 118, 316, 595, 733, 888
BssSI CACGAG 1 cut(s) 1019
BssT1I CCWWGG 4 cut(s) 253, 524, 1117, 1241
Bst2BI CACGAG 1 cut(s) 1019
Bst2UI CCWGG 2 cut(s) 163, 824
Bst4CI ACNGT 4 cut(s) 759, 790, 913, 1291
Bst6I CTCTTC 2 cut(s) 276, 681
BstAUI TGTACA 1 cut(s) 718
BstC8I GCNNGC 1 cut(s) 1306
BstDEI CTNAG 4 cut(s) 61, 186, 938, 1032
BstDSI CCRYGG 1 cut(s) 253
BstF5I GGATG 7 cut(s) 448, 534, 544, 1042, 1134, 1208, 1212
BstFNI CGCG 1 cut(s) 1185
BstKTI GATC 6 cut(s) 60, 121, 319, 598, 736, 891
BstMAI GTCTC 2 cut(s) 238, 1022
BstMBI GATC 6 cut(s) 57, 118, 316, 595, 733, 888
BstMWI GCNNNNNNNGC 1 cut(s) 196
BstNI CCWGG 2 cut(s) 163, 824
BstSCI CCNGG 4 cut(s) 161, 323, 822, 1124
BstSFI CTRYAG 2 cut(s) 175, 237
BstUI CGCG 1 cut(s) 1185
BstV1I GCAGC 4 cut(s) 561, 867, 870, 1252
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 4 cut(s) 57, 118, 595, 888
BstYI RGATCY 4 cut(s) 57, 118, 595, 888
Bsu36I CCTNAGG 1 cut(s) 1032
BsuRI GGCC 2 cut(s) 243, 1247
BtgI CCRYGG 1 cut(s) 253
BtgZI GCGATG 1 cut(s) 953
BtsCI GGATG 7 cut(s) 448, 534, 544, 1042, 1134, 1208, 1212
BtsI GCAGTG 1 cut(s) 418
BtsIMutI CAGTG 4 cut(s) 84, 418, 918, 1287
BveI ACCTGC 1 cut(s) 309
Cac8I GCNNGC 1 cut(s) 1306
CciI TCATGA 1 cut(s) 1111
Cfr13I GGNCC 2 cut(s) 242, 1245
CseI GACGC 2 cut(s) 533, 1004
Csp6I GTAC 3 cut(s) 298, 475, 719
CviAII CATG 4 cut(s) 254, 277, 884, 1112
CviQI GTAC 3 cut(s) 298, 475, 719
DdeI CTNAG 4 cut(s) 61, 186, 938, 1032
DpnI GATC 6 cut(s) 59, 120, 318, 597, 735, 890
DpnII GATC 6 cut(s) 57, 118, 316, 595, 733, 888
DraI TTTAAA 1 cut(s) 697
Eam1104I CTCTTC 2 cut(s) 276, 681
EarI CTCTTC 2 cut(s) 276, 681
Ecl136II GAGCTC 1 cut(s) 463
Eco130I CCWWGG 4 cut(s) 253, 524, 1117, 1241
Eco24I GRGCYC 1 cut(s) 465
Eco32I GATATC 1 cut(s) 1098
Eco53kI GAGCTC 1 cut(s) 463
Eco57I CTGAAG 2 cut(s) 108, 575
Eco81I CCTNAGG 1 cut(s) 1032
EcoICRI GAGCTC 1 cut(s) 463
EcoRI GAATTC 1 cut(s) 744
EcoRII CCWGG 2 cut(s) 161, 822
EcoRV GATATC 1 cut(s) 1098
EcoT14I CCWWGG 4 cut(s) 253, 524, 1117, 1241
EcoT38I GRGCYC 1 cut(s) 465
ErhI CCWWGG 4 cut(s) 253, 524, 1117, 1241
Esp3I CGTCTC 1 cut(s) 1022
FaeI CATG 4 cut(s) 257, 280, 887, 1115
FaqI GGGAC 1 cut(s) 1307
FatI CATG 4 cut(s) 253, 276, 883, 1111
FauI CCCGC 1 cut(s) 1332
Fnu4HI GCNGC 5 cut(s) 447, 575, 856, 859, 1266
FokI GGATG 7 cut(s) 455, 541, 551, 1049, 1141, 1215, 1219
FriOI GRGCYC 1 cut(s) 465
Fsp4HI GCNGC 5 cut(s) 447, 575, 856, 859, 1266
FspBI CTAG 5 cut(s) 314, 525, 774, 989, 1079
GluI GCNGC 5 cut(s) 447, 575, 856, 859, 1266
GsuI CTGGAG 1 cut(s) 849
HaeIII GGCC 2 cut(s) 243, 1247
HapII CCGG 2 cut(s) 324, 1125
HgaI GACGC 2 cut(s) 533, 1004
Hin1II CATG 4 cut(s) 257, 280, 887, 1115
HincII GTYRAC 2 cut(s) 909, 1138
HindII GTYRAC 2 cut(s) 909, 1138
HindIII AAGCTT 1 cut(s) 331
HinfI GANTC 6 cut(s) 13, 41, 81, 148, 395, 831
HpaI GTTAAC 1 cut(s) 909
HpaII CCGG 2 cut(s) 324, 1125
HphI GGTGA 4 cut(s) 80, 242, 509, 1094
Hpy166II GTNNAC 3 cut(s) 909, 916, 1138
Hpy188I TCNGA 3 cut(s) 605, 738, 941
Hpy188III TCNNGA 5 cut(s) 314, 548, 593, 1021, 1112
Hpy8I GTNNAC 3 cut(s) 909, 916, 1138
HpyAV CCTTC 3 cut(s) 205, 366, 839
HpyCH4III ACNGT 4 cut(s) 759, 790, 913, 1291
HpyCH4IV ACGT 1 cut(s) 807
HpyCH4V TGCA 3 cut(s) 49, 392, 1042
HpyF10VI GCNNNNNNNGC 1 cut(s) 196
HpyF3I CTNAG 4 cut(s) 61, 186, 938, 1032
HpySE526I ACGT 1 cut(s) 807
Hsp92II CATG 4 cut(s) 257, 280, 887, 1115
KpnI GGTACC 1 cut(s) 301
KspAI GTTAAC 1 cut(s) 909
Kzo9I GATC 6 cut(s) 57, 118, 316, 595, 733, 888
LguI GCTCTTC 1 cut(s) 276
LmnI GCTCC 2 cut(s) 97, 141
Lsp1109I GCAGC 4 cut(s) 561, 867, 870, 1252
LweI GCATC 1 cut(s) 433
MaeI CTAG 5 cut(s) 314, 525, 774, 989, 1079
MaeII ACGT 1 cut(s) 807
MaeIII GTNAC 3 cut(s) 630, 790, 808
MalI GATC 6 cut(s) 59, 120, 318, 597, 735, 890
MbiI CCGCTC 1 cut(s) 1327
MboI GATC 6 cut(s) 57, 118, 316, 595, 733, 888
MboII GAAGA 9 cut(s) 150, 293, 512, 574, 581, 606, 609, 612, 698
MfeI CAATTG 1 cut(s) 1043
MflI RGATCY 4 cut(s) 57, 118, 595, 888
MhlI GDGCHC 3 cut(s) 288, 465, 1310
MlyI GAGTC 1 cut(s) 840
MseI TTAA 9 cut(s) 53, 269, 293, 516, 696, 840, 908, 1233, 1333
MslI CAYNNNNRTG 2 cut(s) 1127, 1149
MspA1I CMGCKG 1 cut(s) 574
MspI CCGG 2 cut(s) 324, 1125
MspR9I CCNGG 4 cut(s) 163, 325, 824, 1126
MunI CAATTG 1 cut(s) 1043
MvaI CCWGG 2 cut(s) 163, 824
MvnI CGCG 1 cut(s) 1185
MwoI GCNNNNNNNGC 1 cut(s) 196
NciI CCSGG 2 cut(s) 325, 1126
NcoI CCATGG 1 cut(s) 253
NdeII GATC 6 cut(s) 57, 118, 316, 595, 733, 888
NlaIII CATG 4 cut(s) 257, 280, 887, 1115
NlaIV GGNNCC 5 cut(s) 120, 264, 299, 890, 1123
NmuCI GTSAC 2 cut(s) 790, 808
PagI TCATGA 1 cut(s) 1111
PciSI GCTCTTC 1 cut(s) 276
PfeI GAWTC 5 cut(s) 13, 41, 81, 148, 395
PkrI GCNGC 5 cut(s) 448, 576, 857, 860, 1267
PleI GAGTC 1 cut(s) 839
PpsI GAGTC 1 cut(s) 839
Psp124BI GAGCTC 1 cut(s) 465
Psp6I CCWGG 2 cut(s) 161, 822
PspGI CCWGG 2 cut(s) 161, 822
PspN4I GGNNCC 5 cut(s) 120, 264, 299, 890, 1123
PspPI GGNCC 2 cut(s) 242, 1245
PsuI RGATCY 4 cut(s) 57, 118, 595, 888
PvuII CAGCTG 1 cut(s) 574
RsaI GTAC 3 cut(s) 299, 476, 720
RsaNI GTAC 3 cut(s) 298, 475, 719
RseI CAYNNNNRTG 2 cut(s) 1127, 1149
SacI GAGCTC 1 cut(s) 465
SapI GCTCTTC 1 cut(s) 276
SaqAI TTAA 9 cut(s) 53, 269, 293, 516, 696, 840, 908, 1233, 1333
SatI GCNGC 5 cut(s) 447, 575, 856, 859, 1266
Sau3AI GATC 6 cut(s) 57, 118, 316, 595, 733, 888
Sau96I GGNCC 2 cut(s) 242, 1245
SchI GAGTC 1 cut(s) 840
ScrFI CCNGG 4 cut(s) 163, 325, 824, 1126
SduI GDGCHC 3 cut(s) 288, 465, 1310
SfaNI GCATC 1 cut(s) 433
SfcI CTRYAG 2 cut(s) 175, 237
SmiMI CAYNNNNRTG 2 cut(s) 1127, 1149
SmlI CTYRAG 2 cut(s) 128, 225
SmoI CTYRAG 2 cut(s) 128, 225
SsiI CCGC 7 cut(s) 66, 139, 166, 447, 556, 1183, 1325
SspI AATATT 3 cut(s) 8, 36, 703
SspMI CTAG 5 cut(s) 314, 525, 774, 989, 1079
SstI GAGCTC 1 cut(s) 465
StyD4I CCNGG 4 cut(s) 161, 323, 822, 1124
StyI CCWWGG 4 cut(s) 253, 524, 1117, 1241
TaaI ACNGT 4 cut(s) 759, 790, 913, 1291
TaiI ACGT 1 cut(s) 810
TaqI TCGA 2 cut(s) 319, 894
TatI WGTACW 1 cut(s) 718
TauI GCSGC 1 cut(s) 449
TfiI GAWTC 5 cut(s) 13, 41, 81, 148, 395
Tru1I TTAA 9 cut(s) 53, 269, 293, 516, 696, 840, 908, 1233, 1333
Tru9I TTAA 9 cut(s) 53, 269, 293, 516, 696, 840, 908, 1233, 1333
TscAI CASTG 4 cut(s) 91, 418, 918, 1294
TseFI GTSAC 2 cut(s) 790, 808
TseI GCWGC 4 cut(s) 574, 855, 858, 1265
Tsp45I GTSAC 2 cut(s) 790, 808
TspDTI ATGAA 6 cut(s) 17, 89, 432, 574, 1025, 1100
TspGWI ACGGA 3 cut(s) 388, 768, 1215
TspRI CASTG 4 cut(s) 91, 418, 918, 1294
XapI RAATTY 6 cut(s) 419, 650, 691, 744, 875, 897
XbaI TCTAGA 1 cut(s) 313
XmaJI CCTAGG 1 cut(s) 524
XspI CTAG 5 cut(s) 314, 525, 774, 989, 1079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.