Prupe.7G096100_v2.0.a1

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000131
Physical Location & Seq
Forward (+)
12809280 .. 12812449
3170 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G096100.1

Sequence Viewer

Length: 1368 bp
ATGAGGGGCCGTGCACATATTTCAGGGACGCCCCATAGGCATGGCGATAGAGGTATAGCGCATGATGGTGCTTCAAGCATACCAACCAGTGATGAGGGATCGATAATTGGAAATTCGAGTGATTCAGTGGCGATTGCCATACAGCAATTAATCCGAAGCACGCCTGATCTGAGGCCTGAGTGTTGCATCTACAATGTCCCGGAGAGATTTCGCAAGGGGAATGAAGAATTCTACAAACCTCGTGTAGTCGCAATCGGACCTTATCACTTCAAAGATGCAAGCTATGCCATGTGTAAGCCCAAATACGTGGACGCCTTTTTCCGCCGGAACAAGCTCAACTTGGACCATTGTCTTGGATTAGTGAGAGCATGGGAAGCAAAAGCAAGGAGCTATTATGTGAAGCATATTGAACTAAGTAGTGATAAATTTACTTTTATCATGCTGATGGATGCAACTTTTGTTTTGGAACTCATGCTTAGGCATCACTTTTCTAGATACAGAGATAATTGTGATCCGATATTTCACAAGCCGAGGATGATTGAAGACGTTTACCACGACATCTTGTTGATCGAAAATCAACTTCCCTTCTTCGTCCTTGAGGGTTTGTACGAGCAAATCGGTACGAATAGTCTCACTCCAGGAGATGATCATCTTTCTTTCACCATGCTAACTCATGAGTTCTTCAAGCATTTCGTGAAAATTGATAAGTTTCCCGCCCATGTTGTCTCTGCTAATGATCAAGTGAATCATTTTGTTGATTTTATACGACGCTACTACTTGGCGCCGCCACCGCCTCAAGAGGACCAGCAAAAACATAACGCTAATGTTCATGAAATTCCACCAAGCGTGACGGCACTCGATGAGGCCGGAGTTAAGTTTGAGACAATTAAAGGCAGTGCCTCCTTGCTTAACATAGAATTCAAGAATGGCCGTCTCAAAATTCCAAATTTCATAGTAGACGACTGGACAGAAACTCTCTTCAGGAACCTGATTGCTTTCGAGCAGTGCCACGACACAGAGAAGTACATTTCCCAGTTTATGTTCCTCATGATGTGCATGATCAGGACTTCAAAGGACGCAGATTTACTCATGGACTCCGGAGTCATATCTAGCATGCTAGGGAGTAGTAAAGACCTCTCCATTCTATTTAACCATATCAACAGAGACGTTGGCTTCGGAGAGCCTTTTCATTACTTTCAGATTTGTGCAAATCTAAATGCATACTGCAATACCCCTCGGCACCGGTGGAAGGCAATTCTGAAGCGAGACTATTTCAACACTCCATGGAAACTTGCTTCTACTATTGCTGCAATTATACTCCTTGTGCTCACATTCATCCAAACCATATGCTCTATCTTATCCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

456

Amino Acids

52.41

Weight (kDa)

6.89

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1100
AccB1I GGYRCC 2 cut(s) 781, 1239
AccI GTMKAC 1 cut(s) 957
AccIII TCCGGA 1 cut(s) 1097
AciI CCGC 4 cut(s) 322, 714, 785, 791
AclWI GGATC 2 cut(s) 106, 506
AcoI YGGCCR 1 cut(s) 928
AcsI RAATTY 7 cut(s) 112, 227, 425, 834, 917, 939, 946
AcuI CTGAAG 2 cut(s) 964, 1280
AcyI GRCGYC 3 cut(s) 29, 312, 782
AfaI GTAC 3 cut(s) 608, 622, 1025
AfiI CCNNNNNNNGG 1 cut(s) 1249
AgeI ACCGGT 1 cut(s) 1242
AgsI TTSAA 8 cut(s) 75, 271, 410, 542, 685, 922, 1071, 1276
AjnI CCWGG 1 cut(s) 637
AluBI AGCT 3 cut(s) 282, 334, 390
AluI AGCT 3 cut(s) 282, 334, 390
Alw21I GWGCWC 2 cut(s) 16, 1329
Alw26I GTCTC 6 cut(s) 635, 730, 875, 938, 1158, 1260
Alw44I GTGCAC 1 cut(s) 12
AlwI GGATC 2 cut(s) 106, 506
Aor13HI TCCGGA 1 cut(s) 1097
AoxI GGCC 4 cut(s) 7, 173, 864, 928
ApaLI GTGCAC 1 cut(s) 12
ApeKI GCWGC 1 cut(s) 1307
ApoI RAATTY 7 cut(s) 112, 227, 425, 834, 917, 939, 946
ArsI GACNNNNNNTTYG 2 cut(s) 1157, 1189
AseI ATTAAT 1 cut(s) 149
AsiGI ACCGGT 1 cut(s) 1242
AspLEI GCGC 2 cut(s) 61, 784
AspS9I GGNCC 4 cut(s) 7, 257, 343, 802
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 1 cut(s) 652
AvaII GGWCC 3 cut(s) 257, 343, 802
BaeGI GKGCMC 1 cut(s) 16
BanI GGYRCC 2 cut(s) 781, 1239
BauI CACGAG 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 549
Bbv12I GWGCWC 2 cut(s) 16, 1329
BbvI GCAGC 1 cut(s) 1294
BccI CCATC 2 cut(s) 59, 439
BceAI ACGGC 2 cut(s) 867, 915
BciT130I CCWGG 1 cut(s) 639
BclI TGATCA 3 cut(s) 646, 736, 1059
BcnI CCSGG 1 cut(s) 200
BcoDI GTCTC 6 cut(s) 635, 730, 875, 938, 1158, 1260
BfaI CTAG 3 cut(s) 492, 1110, 1118
BfoI RGCGCY 1 cut(s) 785
BglI GCCNNNNNGGC 1 cut(s) 37
BisI GCNGC 2 cut(s) 785, 1308
BlsI GCNGC 2 cut(s) 786, 1309
Bme1390I CCNGG 2 cut(s) 200, 639
Bme18I GGWCC 3 cut(s) 257, 343, 802
BmgT120I GGNCC 4 cut(s) 7, 257, 343, 802
BmiI GGNNCC 4 cut(s) 8, 783, 986, 1241
BmrFI CCNGG 2 cut(s) 200, 639
BmrI ACTGGG 1 cut(s) 1027
BmsI GCATC 4 cut(s) 195, 265, 439, 490
BmuI ACTGGG 1 cut(s) 1027
BoxI GACNNNNGTC 1 cut(s) 348
BpiI GAAGAC 1 cut(s) 549
BpmI CTGGAG 1 cut(s) 621
Bpu10I CCTNAGC 1 cut(s) 476
BpuEI CTTGAG 2 cut(s) 617, 780
BpuMI CCSGG 1 cut(s) 200
Bsa29I ATCGAT 1 cut(s) 101
BsaAI YACGTR 1 cut(s) 307
BsaBI GATNNNNATC 1 cut(s) 648
BsaHI GRCGYC 3 cut(s) 29, 312, 782
BsaJI CCNNGG 3 cut(s) 530, 1235, 1283
BsaWI WCCGGW 2 cut(s) 1097, 1242
Bsc4I CCNNNNNNNGG 1 cut(s) 1249
Bse118I RCCGGY 1 cut(s) 1242
Bse1I ACTGG 3 cut(s) 87, 968, 1033
Bse8I GATNNNNATC 1 cut(s) 648
BseAI TCCGGA 1 cut(s) 1097
BseBI CCWGG 1 cut(s) 639
BseCI ATCGAT 1 cut(s) 101
BseDI CCNNGG 3 cut(s) 530, 1235, 1283
BseGI GGATG 3 cut(s) 454, 540, 1335
BseJI GATNNNNATC 1 cut(s) 648
BseLI CCNNNNNNNGG 1 cut(s) 1249
BseMII CTCAG 2 cut(s) 161, 168
BseNI ACTGG 3 cut(s) 87, 968, 1033
BseSI GKGCMC 1 cut(s) 16
BseXI GCAGC 1 cut(s) 1294
BshFI GGCC 4 cut(s) 9, 175, 866, 930
BshNI GGYRCC 2 cut(s) 781, 1239
BshTI ACCGGT 1 cut(s) 1242
BshVI ATCGAT 1 cut(s) 101
BsiHKAI GWGCWC 2 cut(s) 16, 1329
BsiSI CCGG 5 cut(s) 200, 325, 867, 1098, 1243
BslFI GGGAC 2 cut(s) 40, 182
BslI CCNNNNNNNGG 1 cut(s) 1249
BsmAI GTCTC 6 cut(s) 635, 730, 875, 938, 1158, 1260
BsmBI CGTCTC 2 cut(s) 938, 1158
BsmFI GGGAC 2 cut(s) 40, 182
BsnI GGCC 4 cut(s) 9, 175, 866, 930
Bsp1286I GDGCHC 2 cut(s) 16, 1329
Bsp13I TCCGGA 1 cut(s) 1097
Bsp143I GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
Bsp19I CCATGG 1 cut(s) 1283
BspACI CCGC 4 cut(s) 322, 714, 785, 791
BspANI GGCC 4 cut(s) 9, 175, 866, 930
BspCNI CTCAG 2 cut(s) 162, 169
BspDI ATCGAT 1 cut(s) 101
BspEI TCCGGA 1 cut(s) 1097
BspHI TCATGA 3 cut(s) 673, 829, 1047
BspLI GGNNCC 4 cut(s) 8, 783, 986, 1241
BspPI GGATC 2 cut(s) 106, 506
BspT107I GGYRCC 2 cut(s) 781, 1239
BsrFI RCCGGY 1 cut(s) 1242
BsrI ACTGG 3 cut(s) 87, 968, 1033
BssAI RCCGGY 1 cut(s) 1242
BssECI CCNNGG 3 cut(s) 530, 1235, 1283
BssMI GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
BssNI GRCGYC 3 cut(s) 29, 312, 782
BssSI CACGAG 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 1283
Bst2BI CACGAG 1 cut(s) 240
Bst2UI CCWGG 1 cut(s) 639
Bst6I CTCTTC 1 cut(s) 983
BstACI GRCGYC 3 cut(s) 29, 312, 782
BstAPI GCANNNNNTGC 1 cut(s) 284
BstBAI YACGTR 1 cut(s) 307
BstC8I GCNNGC 3 cut(s) 161, 280, 1115
BstDEI CTNAG 4 cut(s) 170, 177, 413, 476
BstDSI CCRYGG 1 cut(s) 1283
BstF5I GGATG 3 cut(s) 454, 540, 1335
BstH2I RGCGCY 1 cut(s) 785
BstHHI GCGC 2 cut(s) 61, 784
BstKTI GATC 7 cut(s) 101, 169, 514, 570, 649, 739, 1062
BstMAI GTCTC 6 cut(s) 635, 730, 875, 938, 1158, 1260
BstMBI GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
BstMWI GCNNNNNNNGC 4 cut(s) 37, 284, 374, 790
BstNI CCWGG 1 cut(s) 639
BstNSI RCATGY 1 cut(s) 1117
BstPAI GACNNNNGTC 1 cut(s) 348
BstSCI CCNGG 2 cut(s) 198, 637
BstSLI GKGCMC 1 cut(s) 16
BstV1I GCAGC 1 cut(s) 1294
BstV2I GAAGAC 1 cut(s) 549
BstXI CCANNNNNNTGG 3 cut(s) 41, 307, 353
Bsu15I ATCGAT 1 cut(s) 101
BsuRI GGCC 4 cut(s) 9, 175, 866, 930
BsuTUI ATCGAT 1 cut(s) 101
BtgI CCRYGG 1 cut(s) 1283
BtsCI GGATG 3 cut(s) 454, 540, 1335
BtsI GCAGTG 2 cut(s) 901, 1010
BtsIMutI CAGTG 4 cut(s) 94, 132, 901, 1010
Cac8I GCNNGC 3 cut(s) 161, 280, 1115
CciI TCATGA 3 cut(s) 673, 829, 1047
CfoI GCGC 2 cut(s) 61, 784
Cfr10I RCCGGY 1 cut(s) 1242
Cfr13I GGNCC 4 cut(s) 7, 257, 343, 802
ClaI ATCGAT 1 cut(s) 101
CseI GACGC 4 cut(s) 37, 320, 777, 1085
Csp6I GTAC 3 cut(s) 607, 621, 1024
CspAI ACCGGT 1 cut(s) 1242
CviQI GTAC 3 cut(s) 607, 621, 1024
DdeI CTNAG 4 cut(s) 170, 177, 413, 476
DinI GGCGCC 1 cut(s) 783
DpnI GATC 7 cut(s) 100, 168, 513, 569, 648, 738, 1061
DpnII GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
DrdI GACNNNNNNGTC 1 cut(s) 1100
DseDI GACNNNNNNGTC 1 cut(s) 1100
EaeI YGGCCR 1 cut(s) 928
Eam1104I CTCTTC 1 cut(s) 983
EarI CTCTTC 1 cut(s) 983
EciI GGCGGA 1 cut(s) 311
Eco130I CCWWGG 1 cut(s) 1283
Eco147I AGGCCT 1 cut(s) 175
Eco47I GGWCC 3 cut(s) 257, 343, 802
Eco57I CTGAAG 2 cut(s) 964, 1280
EcoRI GAATTC 2 cut(s) 227, 917
EcoRII CCWGG 1 cut(s) 637
EcoT14I CCWWGG 1 cut(s) 1283
EcoT22I ATGCAT 1 cut(s) 1222
EgeI GGCGCC 1 cut(s) 783
EheI GGCGCC 1 cut(s) 783
ErhI CCWWGG 1 cut(s) 1283
Esp3I CGTCTC 2 cut(s) 938, 1158
FalI AAGNNNNNCTT 2 cut(s) 323, 355
FaqI GGGAC 2 cut(s) 40, 182
FauI CCCGC 1 cut(s) 721
FauNDI CATATG 1 cut(s) 1346
FbaI TGATCA 3 cut(s) 646, 736, 1059
FblI GTMKAC 1 cut(s) 957
Fnu4HI GCNGC 2 cut(s) 785, 1308
FokI GGATG 3 cut(s) 461, 547, 1322
Fsp4HI GCNGC 2 cut(s) 785, 1308
FspBI CTAG 3 cut(s) 492, 1110, 1118
GlaI GCGC 2 cut(s) 60, 783
GluI GCNGC 2 cut(s) 785, 1308
GsuI CTGGAG 1 cut(s) 621
HaeII RGCGCY 1 cut(s) 785
HaeIII GGCC 4 cut(s) 9, 175, 866, 930
HapII CCGG 5 cut(s) 200, 325, 867, 1098, 1243
HgaI GACGC 4 cut(s) 37, 320, 777, 1085
HhaI GCGC 2 cut(s) 61, 784
Hin1I GRCGYC 3 cut(s) 29, 312, 782
Hin6I GCGC 2 cut(s) 59, 782
HinP1I GCGC 2 cut(s) 59, 782
HinfI GANTC 4 cut(s) 122, 745, 1094, 1101
HpaII CCGG 5 cut(s) 200, 325, 867, 1098, 1243
HphI GGTGA 1 cut(s) 652
Hpy166II GTNNAC 4 cut(s) 14, 310, 550, 958
Hpy188I TCNGA 7 cut(s) 155, 171, 257, 516, 1178, 1200, 1260
Hpy8I GTNNAC 4 cut(s) 14, 310, 550, 958
Hpy99I CGWCG 1 cut(s) 771
HpyAV CCTTC 2 cut(s) 595, 1243
HpyCH4IV ACGT 3 cut(s) 306, 546, 1167
HpyCH4V TGCA 9 cut(s) 14, 186, 278, 452, 1056, 1208, 1220, 1227, 1310
HpyF10VI GCNNNNNNNGC 4 cut(s) 37, 284, 374, 790
HpyF3I CTNAG 4 cut(s) 170, 177, 413, 476
HpySE526I ACGT 3 cut(s) 306, 546, 1167
Hsp92I GRCGYC 3 cut(s) 29, 312, 782
HspAI GCGC 2 cut(s) 59, 782
KasI GGCGCC 1 cut(s) 781
Kpn2I TCCGGA 1 cut(s) 1097
Ksp22I TGATCA 3 cut(s) 646, 736, 1059
Kzo9I GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
LmnI GCTCC 1 cut(s) 387
Lsp1109I GCAGC 1 cut(s) 1294
LweI GCATC 4 cut(s) 195, 265, 439, 490
MaeI CTAG 3 cut(s) 492, 1110, 1118
MaeII ACGT 3 cut(s) 306, 546, 1167
MaeIII GTNAC 1 cut(s) 847
MalI GATC 7 cut(s) 100, 168, 513, 569, 648, 738, 1061
MboI GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
MboII GAAGA 5 cut(s) 236, 554, 580, 673, 970
MhlI GDGCHC 2 cut(s) 16, 1329
Mly113I GGCGCC 1 cut(s) 782
MlyI GAGTC 2 cut(s) 1088, 1110
Mph1103I ATGCAT 1 cut(s) 1222
MroI TCCGGA 1 cut(s) 1097
MseI TTAA 5 cut(s) 149, 873, 888, 909, 1149
MslI CAYNNNNRTG 3 cut(s) 39, 66, 443
MspI CCGG 5 cut(s) 200, 325, 867, 1098, 1243
MspR9I CCNGG 2 cut(s) 200, 639
MvaI CCWGG 1 cut(s) 639
MwoI GCNNNNNNNGC 4 cut(s) 37, 284, 374, 790
NarI GGCGCC 1 cut(s) 782
NciI CCSGG 1 cut(s) 200
NcoI CCATGG 1 cut(s) 1283
NdeI CATATG 1 cut(s) 1346
NdeII GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
NlaIV GGNNCC 4 cut(s) 8, 783, 986, 1241
NmeAIII GCCGAG 2 cut(s) 555, 1216
NmuCI GTSAC 1 cut(s) 847
NsiI ATGCAT 1 cut(s) 1222
NspI RCATGY 1 cut(s) 1117
PaeI GCATGC 1 cut(s) 1117
PagI TCATGA 3 cut(s) 673, 829, 1047
PceI AGGCCT 1 cut(s) 175
PcsI WCGNNNNNNNCGW 1 cut(s) 552
PfeI GAWTC 2 cut(s) 122, 745
PfoI TCCNGGA 2 cut(s) 198, 637
PinAI ACCGGT 1 cut(s) 1242
PkrI GCNGC 2 cut(s) 786, 1309
PleI GAGTC 2 cut(s) 1088, 1109
PluTI GGCGCC 1 cut(s) 785
PpsI GAGTC 2 cut(s) 1088, 1109
Ppu21I YACGTR 1 cut(s) 307
PshAI GACNNNNGTC 1 cut(s) 348
PshBI ATTAAT 1 cut(s) 149
Psp6I CCWGG 1 cut(s) 637
PspGI CCWGG 1 cut(s) 637
PspN4I GGNNCC 4 cut(s) 8, 783, 986, 1241
PspPI GGNCC 4 cut(s) 7, 257, 343, 802
RsaI GTAC 3 cut(s) 608, 622, 1025
RsaNI GTAC 3 cut(s) 607, 621, 1024
RseI CAYNNNNRTG 3 cut(s) 39, 66, 443
SaqAI TTAA 5 cut(s) 149, 873, 888, 909, 1149
SatI GCNGC 2 cut(s) 785, 1308
Sau3AI GATC 7 cut(s) 98, 166, 511, 567, 646, 736, 1059
Sau96I GGNCC 4 cut(s) 7, 257, 343, 802
SchI GAGTC 2 cut(s) 1088, 1110
ScrFI CCNGG 2 cut(s) 200, 639
SduI GDGCHC 2 cut(s) 16, 1329
SfaNI GCATC 4 cut(s) 195, 265, 439, 490
SfoI GGCGCC 1 cut(s) 783
SgrAI CRCCGGYG 1 cut(s) 1242
SinI GGWCC 3 cut(s) 257, 343, 802
SmiMI CAYNNNNRTG 3 cut(s) 39, 66, 443
SmlI CTYRAG 2 cut(s) 596, 795
SmoI CTYRAG 2 cut(s) 596, 795
SphI GCATGC 1 cut(s) 1117
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 4 cut(s) 322, 714, 785, 791
SspDI GGCGCC 1 cut(s) 781
SspMI CTAG 3 cut(s) 492, 1110, 1118
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 2 cut(s) 198, 637
StyI CCWWGG 1 cut(s) 1283
TaiI ACGT 3 cut(s) 309, 549, 1170
TaqI TCGA 5 cut(s) 101, 116, 570, 858, 999
TatI WGTACW 1 cut(s) 1023
TauI GCSGC 1 cut(s) 787
TfiI GAWTC 2 cut(s) 122, 745
Tru1I TTAA 5 cut(s) 149, 873, 888, 909, 1149
Tru9I TTAA 5 cut(s) 149, 873, 888, 909, 1149
TscAI CASTG 4 cut(s) 94, 132, 901, 1010
TseFI GTSAC 1 cut(s) 847
TseI GCWGC 1 cut(s) 1307
Tsp45I GTSAC 1 cut(s) 847
TspDTI ATGAA 6 cut(s) 237, 818, 846, 940, 1178, 1324
TspRI CASTG 4 cut(s) 94, 132, 901, 1010
VneI GTGCAC 1 cut(s) 12
VpaK11BI GGWCC 3 cut(s) 257, 343, 802
VspI ATTAAT 1 cut(s) 149
XapI RAATTY 7 cut(s) 112, 227, 425, 834, 917, 939, 946
XbaI TCTAGA 1 cut(s) 491
XceI RCATGY 1 cut(s) 1117
XmiI GTMKAC 1 cut(s) 957
XspI CTAG 3 cut(s) 492, 1110, 1118
Zsp2I ATGCAT 1 cut(s) 1222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.