MD08G1146400.v1.1

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000131
Physical Location & Seq
Reverse (-)
14663706 .. 14664994
1289 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1146400.v1.1.491

Sequence Viewer

Length: 1248 bp
ATGGAAGGAAGCAACGAAGCTCCACATGACATCGAAAACCCATACATTCCGTTAGCAAAATCAATGAATCGGGAGTTGGATGTTTTGGCTCCCTTGTCGTCTTCGTGTTGTATCTACAGAGTTCCTGAACGACTGCGGCGTGTAAGTGAAAAGGCCTACACACCTCAAGTAGTCTCTATAGGTCCTCTTCACCATGGAAAGGAAGGCCTACAAGCCATGGAAGAGCACAAAAAGAGGTACCTACGAGATTTTATACGCAGAACCAGGGTCGGCTTGGAGCACTATATAAAGAAAATAAAGGACCAAGAGGGCAAGATACGCAGTTGTTACGCAGAAACTATCGAGTTTAGCAGTGACGACTTTGTAAGAATTGTTCTAGTGGATGCAGCATTCATTATTGAGGTCTTGTTGAGGCACCGTTTCCATGAATTGCAGGACGAGAATGATCGTATATTTAACAAACCATGGATGCTGCAGGACGTATGGCCTGACATACGGCTGCTTGAAAATCAGTTGCCATTCTTCGTTCTTGAGGATCTTTTTGACCCAGATAAAATCGATGTACCTTCTGATAGTAACTGTACTGAGAGGCTTTCGATAATCAAACTTTCTCACGTATTCTTCAAAGATCTTGAAGGAGCGGATGGAAATTTGGATAAAATAAAATTATATCTACCGCTACCACTAGAACGGCAGGCTAAAGGGAAACTCAAAACTCTAAACACGCCAAGCATCACAGAGTTACACCGGGCAGGAGTCAAGTTTAGAGTGGGATCAGCCAAAAACTTACTCGACATACAATTCAATGATGGGATTCTAGAAATTCCAAAATTGACAATTAGTGATGAAACAGAACTTACAGTCAGAAACCTCCTTGCCTTTGAACAATGCCACTGTATGGAGAATTACATGAATGACTATGTTGTCATCATGGATCGTTTCGTGAACACTGCAAAGGATGTGGAGTTGCTTGTTAAGCACGGAATTGTTGAAAATAGGCTTGGTGACAGCAGTGGAGGTTCTAATCTGATTAACAACCTTGCCGATGGGGTCATAGTGGACTCGAACGACTTCTATTTTGCTACTCTTTGTGAAGACCTGAACAAGTACTGCAAAACTTCATGGCACAAATGGAAGGCAAATTTAAGACAAAATTATTGCAACACGCCTTGGGCAACTCTATCTATTGCTGCAGCTGTTTTGCTCCTCGTGCTCACTCTCATACAGGCAGTGTGCTCTGTTGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

416

Amino Acids

47.61

Weight (kDa)

5.8

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 38 - 405 3.3e-115 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 923
Acc65I GGTACC 1 cut(s) 237
AccB1I GGYRCC 2 cut(s) 237, 414
AccB7I CCANNNNNTGG 1 cut(s) 898
AccBSI CCGCTC 1 cut(s) 641
AciI CCGC 3 cut(s) 136, 641, 677
AclWI GGATC 3 cut(s) 543, 781, 942
AcsI RAATTY 3 cut(s) 649, 822, 1141
AfaI GTAC 4 cut(s) 239, 564, 583, 1109
AfiI CCNNNNNNNGG 2 cut(s) 199, 898
AgsI TTSAA 6 cut(s) 506, 625, 635, 805, 884, 992
AjnI CCWGG 1 cut(s) 263
AjuI GAANNNNNNNTTGG 4 cut(s) 59, 91, 984, 1016
AluBI AGCT 2 cut(s) 20, 1196
AluI AGCT 2 cut(s) 20, 1196
Alw21I GWGCWC 4 cut(s) 228, 282, 1215, 1238
Alw26I GTCTC 1 cut(s) 178
AlwI GGATC 3 cut(s) 543, 781, 942
AoxI GGCC 3 cut(s) 153, 205, 485
ApeKI GCWGC 5 cut(s) 386, 472, 499, 1190, 1193
ApoI RAATTY 3 cut(s) 649, 822, 1141
ArsI GACNNNNNNTTYG 2 cut(s) 1061, 1093
Asp700I GAANNNNTTC 1 cut(s) 1070
Asp718I GGTACC 1 cut(s) 237
AspS9I GGNCC 2 cut(s) 182, 301
AsuC2I CCSGG 1 cut(s) 749
AsuHPI GGTGA 2 cut(s) 182, 1016
AvaII GGWCC 2 cut(s) 182, 301
BanI GGYRCC 2 cut(s) 237, 414
BauI CACGAG 1 cut(s) 1208
BbsI GAAGAC 2 cut(s) 93, 1101
Bbv12I GWGCWC 4 cut(s) 228, 282, 1215, 1238
BbvI GCAGC 5 cut(s) 398, 459, 486, 1177, 1205
BccI CCATC 3 cut(s) 638, 803, 1040
BceAI ACGGC 2 cut(s) 512, 707
BciT130I CCWGG 1 cut(s) 265
BcnI CCSGG 1 cut(s) 749
BcoDI GTCTC 1 cut(s) 178
BfaI CTAG 3 cut(s) 377, 686, 818
BfmI CTRYAG 4 cut(s) 115, 177, 473, 1191
BglII AGATCT 1 cut(s) 628
BisI GCNGC 6 cut(s) 137, 387, 473, 500, 1191, 1194
BlsI GCNGC 6 cut(s) 138, 388, 474, 501, 1192, 1195
BmcAI AGTACT 1 cut(s) 1109
Bme1390I CCNGG 2 cut(s) 265, 749
Bme18I GGWCC 2 cut(s) 182, 301
BmgT120I GGNCC 2 cut(s) 182, 301
BmiI GGNNCC 3 cut(s) 90, 239, 416
BmrFI CCNGG 2 cut(s) 265, 749
BmsI GCATC 3 cut(s) 373, 459, 741
BpiI GAAGAC 2 cut(s) 93, 1101
BpuEI CTTGAG 2 cut(s) 150, 551
BpuMI CCSGG 1 cut(s) 749
Bsa29I ATCGAT 1 cut(s) 558
BsaAI YACGTR 1 cut(s) 616
BsaJI CCNNGG 5 cut(s) 193, 216, 264, 464, 1169
Bsc4I CCNNNNNNNGG 2 cut(s) 199, 898
BseBI CCWGG 1 cut(s) 265
BseCI ATCGAT 1 cut(s) 558
BseDI CCNNGG 5 cut(s) 193, 216, 264, 464, 1169
BseGI GGATG 5 cut(s) 85, 388, 474, 649, 964
BseLI CCNNNNNNNGG 2 cut(s) 199, 898
BseMII CTCAG 1 cut(s) 576
BseRI GAGGAG 1 cut(s) 1196
BseXI GCAGC 5 cut(s) 398, 459, 486, 1177, 1205
BshFI GGCC 3 cut(s) 155, 207, 487
BshNI GGYRCC 2 cut(s) 237, 414
BshVI ATCGAT 1 cut(s) 558
BsiHKAI GWGCWC 4 cut(s) 228, 282, 1215, 1238
BsiSI CCGG 1 cut(s) 748
BslI CCNNNNNNNGG 2 cut(s) 199, 898
BsmAI GTCTC 1 cut(s) 178
BsmI GAATGC 1 cut(s) 389
BsnI GGCC 3 cut(s) 155, 207, 487
Bsp1286I GDGCHC 4 cut(s) 228, 282, 1215, 1238
Bsp143I GATC 5 cut(s) 445, 535, 628, 773, 934
Bsp19I CCATGG 3 cut(s) 193, 216, 464
BspACI CCGC 3 cut(s) 136, 641, 677
BspANI GGCC 3 cut(s) 155, 207, 487
BspCNI CTCAG 1 cut(s) 577
BspDI ATCGAT 1 cut(s) 558
BspLI GGNNCC 3 cut(s) 90, 239, 416
BspMAI CTGCAG 2 cut(s) 477, 1195
BspPI GGATC 3 cut(s) 543, 781, 942
BspQI GCTCTTC 1 cut(s) 216
BspT107I GGYRCC 2 cut(s) 237, 414
BsrBI CCGCTC 1 cut(s) 641
BssECI CCNNGG 5 cut(s) 193, 216, 264, 464, 1169
BssMI GATC 5 cut(s) 445, 535, 628, 773, 934
BssSI CACGAG 1 cut(s) 1208
BssT1I CCWWGG 4 cut(s) 193, 216, 464, 1169
Bst2BI CACGAG 1 cut(s) 1208
Bst2UI CCWGG 1 cut(s) 265
Bst4CI ACNGT 4 cut(s) 419, 581, 862, 896
Bst6I CTCTTC 2 cut(s) 192, 216
BstBAI YACGTR 1 cut(s) 616
BstC8I GCNNGC 1 cut(s) 696
BstDEI CTNAG 1 cut(s) 585
BstDSI CCRYGG 3 cut(s) 193, 216, 464
BstF5I GGATG 5 cut(s) 85, 388, 474, 649, 964
BstKTI GATC 5 cut(s) 448, 538, 631, 776, 937
BstMAI GTCTC 1 cut(s) 178
BstMBI GATC 5 cut(s) 445, 535, 628, 773, 934
BstMWI GCNNNNNNNGC 3 cut(s) 318, 976, 1210
BstNI CCWGG 1 cut(s) 265
BstSCI CCNGG 2 cut(s) 263, 747
BstSFI CTRYAG 4 cut(s) 115, 177, 473, 1191
BstV1I GCAGC 5 cut(s) 398, 459, 486, 1177, 1205
BstV2I GAAGAC 2 cut(s) 93, 1101
BstX2I RGATCY 2 cut(s) 535, 628
BstYI RGATCY 2 cut(s) 535, 628
Bsu15I ATCGAT 1 cut(s) 558
BsuRI GGCC 3 cut(s) 155, 207, 487
BsuTUI ATCGAT 1 cut(s) 558
BtgI CCRYGG 3 cut(s) 193, 216, 464
BtsCI GGATG 5 cut(s) 85, 388, 474, 649, 964
BtsI GCAGTG 4 cut(s) 358, 948, 1018, 1236
BtsIMutI CAGTG 5 cut(s) 358, 892, 948, 1018, 1236
Cac8I GCNNGC 1 cut(s) 696
Cfr13I GGNCC 2 cut(s) 182, 301
ClaI ATCGAT 1 cut(s) 558
Csp6I GTAC 4 cut(s) 238, 563, 582, 1108
CspCI CAANNNNNGTGG 2 cut(s) 942, 977
CviAII CATG 8 cut(s) 26, 194, 217, 425, 465, 910, 931, 1122
CviQI GTAC 4 cut(s) 238, 563, 582, 1108
DdeI CTNAG 1 cut(s) 585
DpnI GATC 5 cut(s) 447, 537, 630, 775, 936
DpnII GATC 5 cut(s) 445, 535, 628, 773, 934
DrdI GACNNNNNNGTC 1 cut(s) 923
DseDI GACNNNNNNGTC 1 cut(s) 923
Eam1104I CTCTTC 2 cut(s) 192, 216
EarI CTCTTC 2 cut(s) 192, 216
Eco130I CCWWGG 4 cut(s) 193, 216, 464, 1169
Eco147I AGGCCT 2 cut(s) 155, 207
Eco47I GGWCC 2 cut(s) 182, 301
EcoO109I RGGNCCY 1 cut(s) 182
EcoRII CCWGG 1 cut(s) 263
EcoT14I CCWWGG 4 cut(s) 193, 216, 464, 1169
ErhI CCWWGG 4 cut(s) 193, 216, 464, 1169
FaeI CATG 8 cut(s) 29, 197, 220, 428, 468, 913, 934, 1125
FatI CATG 8 cut(s) 25, 193, 216, 424, 464, 909, 930, 1121
Fnu4HI GCNGC 6 cut(s) 137, 387, 473, 500, 1191, 1194
FokI GGATG 5 cut(s) 92, 395, 481, 656, 971
Fsp4HI GCNGC 6 cut(s) 137, 387, 473, 500, 1191, 1194
FspBI CTAG 3 cut(s) 377, 686, 818
GluI GCNGC 6 cut(s) 137, 387, 473, 500, 1191, 1194
HaeIII GGCC 3 cut(s) 155, 207, 487
HapII CCGG 1 cut(s) 748
Hin1II CATG 8 cut(s) 29, 197, 220, 428, 468, 913, 934, 1125
HinfI GANTC 4 cut(s) 67, 756, 814, 1061
HpaII CCGG 1 cut(s) 748
HphI GGTGA 2 cut(s) 182, 1016
Hpy166II GTNNAC 2 cut(s) 946, 1060
Hpy188I TCNGA 3 cut(s) 571, 866, 1029
Hpy188III TCNNGA 6 cut(s) 71, 125, 530, 632, 818, 943
Hpy8I GTNNAC 2 cut(s) 946, 1060
HpyAV CCTTC 4 cut(s) 197, 576, 629, 1129
HpyCH4III ACNGT 4 cut(s) 419, 581, 862, 896
HpyCH4IV ACGT 2 cut(s) 480, 615
HpyCH4V TGCA 7 cut(s) 386, 433, 475, 953, 1113, 1161, 1193
HpyF10VI GCNNNNNNNGC 3 cut(s) 318, 976, 1210
HpyF3I CTNAG 1 cut(s) 585
HpySE526I ACGT 2 cut(s) 480, 615
Hsp92II CATG 8 cut(s) 29, 197, 220, 428, 468, 913, 934, 1125
KpnI GGTACC 1 cut(s) 241
Kzo9I GATC 5 cut(s) 445, 535, 628, 773, 934
LguI GCTCTTC 1 cut(s) 216
LmnI GCTCC 5 cut(s) 25, 94, 277, 638, 1209
Lsp1109I GCAGC 5 cut(s) 398, 459, 486, 1177, 1205
LweI GCATC 3 cut(s) 373, 459, 741
MaeI CTAG 3 cut(s) 377, 686, 818
MaeII ACGT 2 cut(s) 480, 615
MaeIII GTNAC 5 cut(s) 326, 353, 575, 741, 1004
MalI GATC 5 cut(s) 447, 537, 630, 775, 936
MbiI CCGCTC 1 cut(s) 641
MboI GATC 5 cut(s) 445, 535, 628, 773, 934
MboII GAAGA 6 cut(s) 93, 179, 233, 514, 613, 1106
MflI RGATCY 2 cut(s) 535, 628
MhlI GDGCHC 4 cut(s) 228, 282, 1215, 1238
MlyI GAGTC 2 cut(s) 765, 1055
MmeI TCCRAC 1 cut(s) 57
MroXI GAANNNNTTC 1 cut(s) 1070
MseI TTAA 4 cut(s) 456, 975, 1032, 1145
MspA1I CMGCKG 1 cut(s) 1196
MspI CCGG 1 cut(s) 748
MspR9I CCNGG 2 cut(s) 265, 749
Mva1269I GAATGC 1 cut(s) 389
MvaI CCWGG 1 cut(s) 265
MwoI GCNNNNNNNGC 3 cut(s) 318, 976, 1210
NciI CCSGG 1 cut(s) 749
NcoI CCATGG 3 cut(s) 193, 216, 464
NdeII GATC 5 cut(s) 445, 535, 628, 773, 934
NlaIII CATG 8 cut(s) 29, 197, 220, 428, 468, 913, 934, 1125
NlaIV GGNNCC 3 cut(s) 90, 239, 416
NmuCI GTSAC 2 cut(s) 353, 1004
PceI AGGCCT 2 cut(s) 155, 207
PciSI GCTCTTC 1 cut(s) 216
PcsI WCGNNNNNNNCGW 1 cut(s) 136
PctI GAATGC 1 cut(s) 389
PdmI GAANNNNTTC 1 cut(s) 1070
PfeI GAWTC 2 cut(s) 67, 814
PflMI CCANNNNNTGG 1 cut(s) 898
PkrI GCNGC 6 cut(s) 138, 388, 474, 501, 1192, 1195
PleI GAGTC 2 cut(s) 764, 1055
PpsI GAGTC 2 cut(s) 764, 1055
Ppu21I YACGTR 1 cut(s) 616
PpuMI RGGWCCY 1 cut(s) 182
Psp5II RGGWCCY 1 cut(s) 182
Psp6I CCWGG 1 cut(s) 263
PspGI CCWGG 1 cut(s) 263
PspN4I GGNNCC 3 cut(s) 90, 239, 416
PspPI GGNCC 2 cut(s) 182, 301
PspPPI RGGWCCY 1 cut(s) 182
PsrI GAACNNNNNNTAC 2 cut(s) 357, 389
PstI CTGCAG 2 cut(s) 477, 1195
PsuI RGATCY 2 cut(s) 535, 628
PvuII CAGCTG 1 cut(s) 1196
RsaI GTAC 4 cut(s) 239, 564, 583, 1109
RsaNI GTAC 4 cut(s) 238, 563, 582, 1108
SapI GCTCTTC 1 cut(s) 216
SaqAI TTAA 4 cut(s) 456, 975, 1032, 1145
SatI GCNGC 6 cut(s) 137, 387, 473, 500, 1191, 1194
Sau3AI GATC 5 cut(s) 445, 535, 628, 773, 934
Sau96I GGNCC 2 cut(s) 182, 301
ScaI AGTACT 1 cut(s) 1109
SchI GAGTC 2 cut(s) 765, 1055
ScrFI CCNGG 2 cut(s) 265, 749
SduI GDGCHC 4 cut(s) 228, 282, 1215, 1238
SfaNI GCATC 3 cut(s) 373, 459, 741
SfcI CTRYAG 4 cut(s) 115, 177, 473, 1191
SinI GGWCC 2 cut(s) 182, 301
SmlI CTYRAG 2 cut(s) 165, 530
SmoI CTYRAG 2 cut(s) 165, 530
SseBI AGGCCT 2 cut(s) 155, 207
SsiI CCGC 3 cut(s) 136, 641, 677
SspMI CTAG 3 cut(s) 377, 686, 818
StuI AGGCCT 2 cut(s) 155, 207
StyD4I CCNGG 2 cut(s) 263, 747
StyI CCWWGG 4 cut(s) 193, 216, 464, 1169
TaaI ACNGT 4 cut(s) 419, 581, 862, 896
TaiI ACGT 2 cut(s) 483, 618
TaqI TCGA 6 cut(s) 33, 342, 558, 596, 792, 1064
TatI WGTACW 2 cut(s) 581, 1107
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 2 cut(s) 67, 814
Tru1I TTAA 4 cut(s) 456, 975, 1032, 1145
Tru9I TTAA 4 cut(s) 456, 975, 1032, 1145
TscAI CASTG 5 cut(s) 358, 899, 955, 1018, 1236
TseFI GTSAC 2 cut(s) 353, 1004
TseI GCWGC 5 cut(s) 386, 472, 499, 1190, 1193
Tsp45I GTSAC 2 cut(s) 353, 1004
TspDTI ATGAA 6 cut(s) 80, 382, 441, 861, 926, 1110
TspGWI ACGGA 2 cut(s) 39, 996
TspRI CASTG 5 cut(s) 358, 899, 955, 1018, 1236
Van91I CCANNNNNTGG 1 cut(s) 898
VpaK11BI GGWCC 2 cut(s) 182, 301
XapI RAATTY 3 cut(s) 649, 822, 1141
XbaI TCTAGA 1 cut(s) 817
XcmI CCANNNNNNNNNTGG 1 cut(s) 271
XmnI GAANNNNTTC 1 cut(s) 1070
XspI CTAG 3 cut(s) 377, 686, 818
ZrmI AGTACT 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.