Rroxscaffold_7G00169700

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000131
Physical Location & Seq
Reverse (-)
10261581 .. 10262861
1281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169700.1

Sequence Viewer

Length: 1281 bp
ATGGAAGAGTCACATGCTAAAAATCTCAAACATAAGCTGAAAGGGATATCTCCCATATCCTCCGAGTGTTGTATCTACAGGATTCCAAAGCGACTACGTGACGTGAATGAGAAGGCTTACACACCTCAGGTGGTCTCACTAGGTCCGATTCACCATGGAGTCGAAGGCCTAGAAGCCATGGAAGATCATAAAATGCGGTATGTGAAGGACTTCTTTGAAAGAACCAAAGTAAACCTGGAGGATTGTTTCAAATCTTTGAAGGAATGGGAAGCACGAATCCGTTCTTGTTATGCAGTAAACATTGAATTTAGTGAAGAGGAGCTGGTGGAAATGATGCTGGTTGATGGAATTTTTACAGTTGAGGTCCTGCTGAGGAGTGCCTTCCCGACACTGCAACAGGAAAATGACCGGATATTTGGGAAACCATGGATGGACAGGGATGTAGTATATGACATGTTGATGCTTGAAAATCAGCTCCCATTCTTTATCCTCGAGTATTTCTATTCCTTAGCCCATGCCAGCAATACTATTCCTCTCGAAAATGATATGGGGCTTTCACTCATCAAGCTCACCCATAGCTTCTTCGAGGAAAAGGTATATATAAGGCCACTGGAAGAGGTTTCAAACAAACTCTCGCAGTATTCAGGAGCCAGAATACAACATTTTGTTGACTATATCCTGAAATGTCATCGGCCTTCACCTTCTGAGCTTCCATCCAAAAGAAAGCTCGACACTTTGAGTATACCAAGTGCGACGCAGTTGAAGGCAGCTGGAGTCAAGTTTATGGTGGTTCACGACACAACCCTATTTGACATTCAATTTGAGAATGGTATTCTGAAAATTCCACAGTTGCGAATACGTGGTTCGACAGAAGTTTTCTTCCGGAACCTTATTGCCTATGAGCAGTTTGAGCTCCATGATCATTACATAAGTGATTATGTATTCATTATCGACCACCTGCTTGATAGTTCCAGAGATGTGGAATTACTTGCTAGGAAAGGAATCCTTGAGTCTAAGCTATCAGATAGCAAAGCAGTGACGAATTTTATTAGCACCCTTGACTTGGGGCCGATTTTATTTGGGACAAATTTCTATTTCACCGAGCTTTGTGAAAAGCTGAATGAATACTACGGCGTCCCCTGGCACAACTGGAAGGCAAGTTTGCAACAAGATTATCTCAGTAGTCCGTGGGCCATCCTAGCTATCACGATTGCGACCATTCTTCTAGTACTCACTCTCGCTCAAGCAGGGCTCTCCCTTGCGAATATTACACAAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

426

Amino Acids

49.21

Weight (kDa)

5.66

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 25 - 411 1.5e-111 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 966
Acc36I ACCTGC 1 cut(s) 966
AccI GTMKAC 1 cut(s) 742
AccIII TCCGGA 1 cut(s) 882
AciI CCGC 1 cut(s) 196
AcsI RAATTY 5 cut(s) 305, 348, 840, 1042, 1087
AcyI GRCGYC 1 cut(s) 1134
AfaI GTAC 1 cut(s) 1230
AfiI CCNNNNNNNGG 1 cut(s) 1063
AflIII ACRYGT 1 cut(s) 453
AgsI TTSAA 8 cut(s) 218, 250, 259, 305, 467, 624, 763, 818
AjiI CACGTC 1 cut(s) 103
AjnI CCWGG 2 cut(s) 234, 1139
Alw21I GWGCWC 1 cut(s) 915
Alw26I GTCTC 1 cut(s) 139
Ama87I CYCGRG 1 cut(s) 491
Aor13HI TCCGGA 1 cut(s) 882
AoxI GGCC 5 cut(s) 166, 605, 692, 1067, 1191
ApeKI GCWGC 1 cut(s) 767
ApoI RAATTY 5 cut(s) 305, 348, 840, 1042, 1087
ArsI GACNNNNNNTTYG 4 cut(s) 398, 430, 803, 835
Asp700I GAANNNNTTC 2 cut(s) 209, 280
AspS9I GGNCC 4 cut(s) 143, 364, 1067, 1191
AsuHPI GGTGA 4 cut(s) 143, 562, 690, 1090
AvaI CYCGRG 1 cut(s) 491
AvaII GGWCC 2 cut(s) 143, 364
AxyI CCTNAGG 1 cut(s) 126
BanII GRGCYC 2 cut(s) 915, 1254
Bbv12I GWGCWC 1 cut(s) 915
BbvCI CCTCAGC 1 cut(s) 371
BbvI GCAGC 1 cut(s) 779
BccI CCATC 4 cut(s) 338, 424, 721, 1202
BceAI ACGGC 1 cut(s) 1147
BciT130I CCWGG 2 cut(s) 236, 1141
BclI TGATCA 1 cut(s) 919
BcoDI GTCTC 1 cut(s) 139
BfaI CTAG 5 cut(s) 140, 170, 993, 1199, 1226
BfmI CTRYAG 1 cut(s) 76
BfuAI ACCTGC 1 cut(s) 966
BisI GCNGC 1 cut(s) 768
BlsI GCNGC 1 cut(s) 769
BmcAI AGTACT 1 cut(s) 1230
Bme1390I CCNGG 2 cut(s) 236, 1141
Bme18I GGWCC 2 cut(s) 143, 364
BmeT110I CYCGRG 1 cut(s) 491
BmgBI CACGTC 1 cut(s) 103
BmgT120I GGNCC 4 cut(s) 143, 364, 1067, 1191
BmiI GGNNCC 3 cut(s) 649, 887, 1068
BmrFI CCNGG 2 cut(s) 236, 1141
BmsI GCATC 2 cut(s) 324, 450
BpmI CTGGAG 2 cut(s) 257, 792
Bpu10I CCTNAGC 2 cut(s) 371, 508
BpuEI CTTGAG 2 cut(s) 1028, 1227
BsaAI YACGTR 2 cut(s) 98, 860
BsaHI GRCGYC 1 cut(s) 1134
BsaI GGTCTC 1 cut(s) 139
BsaJI CCNNGG 5 cut(s) 154, 177, 425, 1139, 1187
BsaWI WCCGGW 2 cut(s) 408, 882
Bsc4I CCNNNNNNNGG 1 cut(s) 1063
Bse1I ACTGG 2 cut(s) 615, 1154
Bse21I CCTNAGG 1 cut(s) 126
BseAI TCCGGA 1 cut(s) 882
BseBI CCWGG 2 cut(s) 236, 1141
BseDI CCNNGG 5 cut(s) 154, 177, 425, 1139, 1187
BseGI GGATG 4 cut(s) 435, 445, 713, 1194
BseLI CCNNNNNNNGG 1 cut(s) 1063
BseMII CTCAG 4 cut(s) 140, 362, 696, 1192
BseNI ACTGG 2 cut(s) 615, 1154
BseRI GAGGAG 2 cut(s) 332, 388
BseXI GCAGC 1 cut(s) 779
BshFI GGCC 5 cut(s) 168, 607, 694, 1069, 1193
BsiHKAI GWGCWC 1 cut(s) 915
BsiHKCI CYCGRG 1 cut(s) 491
BsiSI CCGG 2 cut(s) 409, 883
BslFI GGGAC 2 cut(s) 1096, 1121
BslI CCNNNNNNNGG 1 cut(s) 1063
BsmAI GTCTC 1 cut(s) 139
BsmFI GGGAC 2 cut(s) 1096, 1121
BsnI GGCC 5 cut(s) 168, 607, 694, 1069, 1193
Bso31I GGTCTC 1 cut(s) 139
BsoBI CYCGRG 1 cut(s) 491
Bsp1286I GDGCHC 2 cut(s) 915, 1254
Bsp13I TCCGGA 1 cut(s) 882
Bsp143I GATC 2 cut(s) 184, 919
Bsp19I CCATGG 3 cut(s) 154, 177, 425
BspACI CCGC 1 cut(s) 196
BspANI GGCC 5 cut(s) 168, 607, 694, 1069, 1193
BspCNI CTCAG 4 cut(s) 139, 363, 697, 1191
BspEI TCCGGA 1 cut(s) 882
BspLI GGNNCC 3 cut(s) 649, 887, 1068
BspMI ACCTGC 1 cut(s) 966
BspTNI GGTCTC 1 cut(s) 139
BsrI ACTGG 2 cut(s) 615, 1154
BssECI CCNNGG 5 cut(s) 154, 177, 425, 1139, 1187
BssMI GATC 2 cut(s) 184, 919
BssNAI GTATAC 1 cut(s) 743
BssNI GRCGYC 1 cut(s) 1134
BssT1I CCWWGG 3 cut(s) 154, 177, 425
Bst1107I GTATAC 1 cut(s) 743
Bst2UI CCWGG 2 cut(s) 236, 1141
Bst4CI ACNGT 2 cut(s) 358, 849
Bst6I CTCTTC 2 cut(s) 309, 609
BstACI GRCGYC 1 cut(s) 1134
BstBAI YACGTR 2 cut(s) 98, 860
BstC8I GCNNGC 1 cut(s) 520
BstDEI CTNAG 6 cut(s) 126, 371, 508, 705, 1014, 1178
BstDSI CCRYGG 4 cut(s) 154, 177, 425, 1187
BstF5I GGATG 4 cut(s) 435, 445, 713, 1194
BstKTI GATC 2 cut(s) 187, 922
BstMAI GTCTC 1 cut(s) 139
BstMBI GATC 2 cut(s) 184, 919
BstMWI GCNNNNNNNGC 2 cut(s) 910, 1199
BstNI CCWGG 2 cut(s) 236, 1141
BstNSI RCATGY 2 cut(s) 17, 457
BstSCI CCNGG 2 cut(s) 234, 1139
BstSFI CTRYAG 1 cut(s) 76
BstV1I GCAGC 1 cut(s) 779
BstXI CCANNNNNNTGG 1 cut(s) 979
BstZ17I GTATAC 1 cut(s) 743
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 5 cut(s) 168, 607, 694, 1069, 1193
BtgI CCRYGG 4 cut(s) 154, 177, 425, 1187
BtrI CACGTC 1 cut(s) 103
BtsCI GGATG 4 cut(s) 435, 445, 713, 1194
BtsI GCAGTG 2 cut(s) 389, 1041
BtsIMutI CAGTG 3 cut(s) 389, 608, 1041
BveI ACCTGC 1 cut(s) 966
Cac8I GCNNGC 1 cut(s) 520
Cfr13I GGNCC 4 cut(s) 143, 364, 1067, 1191
CseI GACGC 2 cut(s) 763, 1123
Csp6I GTAC 1 cut(s) 1229
CviAII CATG 7 cut(s) 14, 155, 178, 426, 454, 515, 917
CviQI GTAC 1 cut(s) 1229
DdeI CTNAG 6 cut(s) 126, 371, 508, 705, 1014, 1178
DpnI GATC 2 cut(s) 186, 921
DpnII GATC 2 cut(s) 184, 919
Eam1104I CTCTTC 2 cut(s) 309, 609
EarI CTCTTC 2 cut(s) 309, 609
Ecl136II GAGCTC 1 cut(s) 913
Eco130I CCWWGG 3 cut(s) 154, 177, 425
Eco147I AGGCCT 1 cut(s) 168
Eco24I GRGCYC 2 cut(s) 915, 1254
Eco31I GGTCTC 1 cut(s) 139
Eco32I GATATC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 143, 364
Eco53kI GAGCTC 1 cut(s) 913
Eco81I CCTNAGG 1 cut(s) 126
Eco88I CYCGRG 1 cut(s) 491
EcoICRI GAGCTC 1 cut(s) 913
EcoO109I RGGNCCY 1 cut(s) 364
EcoRII CCWGG 2 cut(s) 234, 1139
EcoRV GATATC 1 cut(s) 48
EcoT14I CCWWGG 3 cut(s) 154, 177, 425
EcoT38I GRGCYC 2 cut(s) 915, 1254
ErhI CCWWGG 3 cut(s) 154, 177, 425
FaeI CATG 7 cut(s) 17, 158, 181, 429, 457, 518, 920
FalI AAGNNNNNCTT 4 cut(s) 197, 229, 990, 1022
FaqI GGGAC 2 cut(s) 1096, 1121
FatI CATG 7 cut(s) 13, 154, 177, 425, 453, 514, 916
FbaI TGATCA 1 cut(s) 919
FblI GTMKAC 1 cut(s) 742
Fnu4HI GCNGC 1 cut(s) 768
FokI GGATG 4 cut(s) 442, 452, 700, 1181
FriOI GRGCYC 2 cut(s) 915, 1254
Fsp4HI GCNGC 1 cut(s) 768
FspBI CTAG 5 cut(s) 140, 170, 993, 1199, 1226
GluI GCNGC 1 cut(s) 768
GsuI CTGGAG 2 cut(s) 257, 792
HaeIII GGCC 5 cut(s) 168, 607, 694, 1069, 1193
HapII CCGG 2 cut(s) 409, 883
HgaI GACGC 2 cut(s) 763, 1123
Hin1I GRCGYC 1 cut(s) 1134
Hin1II CATG 7 cut(s) 17, 158, 181, 429, 457, 518, 920
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HinfI GANTC 8 cut(s) 8, 82, 148, 159, 276, 774, 1002, 1010
HpaII CCGG 2 cut(s) 409, 883
HphI GGTGA 4 cut(s) 143, 562, 690, 1090
Hpy166II GTNNAC 5 cut(s) 232, 298, 670, 743, 793
Hpy188I TCNGA 5 cut(s) 64, 147, 706, 837, 1024
Hpy188III TCNNGA 8 cut(s) 385, 536, 645, 679, 794, 883, 972, 1207
Hpy8I GTNNAC 5 cut(s) 232, 298, 670, 743, 793
Hpy99I CGWCG 1 cut(s) 757
HpyAV CCTTC 9 cut(s) 106, 158, 199, 253, 391, 705, 711, 757, 1147
HpyCH4III ACNGT 2 cut(s) 358, 849
HpyCH4IV ACGT 3 cut(s) 97, 102, 859
HpyCH4V TGCA 3 cut(s) 293, 394, 1165
HpyF10VI GCNNNNNNNGC 2 cut(s) 910, 1199
HpyF3I CTNAG 6 cut(s) 126, 371, 508, 705, 1014, 1178
HpySE526I ACGT 3 cut(s) 97, 102, 859
Hsp92I GRCGYC 1 cut(s) 1134
Hsp92II CATG 7 cut(s) 17, 158, 181, 429, 457, 518, 920
Kpn2I TCCGGA 1 cut(s) 882
Ksp22I TGATCA 1 cut(s) 919
Kzo9I GATC 2 cut(s) 184, 919
LmnI GCTCC 4 cut(s) 319, 480, 647, 918
Lsp1109I GCAGC 1 cut(s) 779
LweI GCATC 2 cut(s) 324, 450
MaeI CTAG 5 cut(s) 140, 170, 993, 1199, 1226
MaeII ACGT 3 cut(s) 97, 102, 859
MaeIII GTNAC 3 cut(s) 9, 98, 1036
MalI GATC 2 cut(s) 186, 921
MboI GATC 2 cut(s) 184, 919
MboII GAAGA 7 cut(s) 17, 194, 326, 574, 626, 871, 1214
MhlI GDGCHC 2 cut(s) 915, 1254
MluCI AATT 8 cut(s) 305, 348, 818, 840, 983, 1042, 1087, 1276
MlyI GAGTC 4 cut(s) 17, 168, 783, 1019
MroI TCCGGA 1 cut(s) 882
MroXI GAANNNNTTC 2 cut(s) 209, 280
MslI CAYNNNNRTG 1 cut(s) 458
MspA1I CMGCKG 1 cut(s) 770
MspI CCGG 2 cut(s) 409, 883
MspR9I CCNGG 2 cut(s) 236, 1141
MvaI CCWGG 2 cut(s) 236, 1141
MwoI GCNNNNNNNGC 2 cut(s) 910, 1199
NcoI CCATGG 3 cut(s) 154, 177, 425
NdeII GATC 2 cut(s) 184, 919
NlaIII CATG 7 cut(s) 17, 158, 181, 429, 457, 518, 920
NlaIV GGNNCC 3 cut(s) 649, 887, 1068
NmuCI GTSAC 3 cut(s) 9, 98, 1036
NspI RCATGY 2 cut(s) 17, 457
PaeR7I CTCGAG 1 cut(s) 491
PaqCI CACCTGC 1 cut(s) 966
PceI AGGCCT 1 cut(s) 168
PciI ACATGT 1 cut(s) 453
PdmI GAANNNNTTC 2 cut(s) 209, 280
PfeI GAWTC 4 cut(s) 82, 148, 276, 1002
PkrI GCNGC 1 cut(s) 769
PleI GAGTC 4 cut(s) 16, 167, 782, 1018
PpsI GAGTC 4 cut(s) 16, 167, 782, 1018
Ppu21I YACGTR 2 cut(s) 98, 860
PpuMI RGGWCCY 1 cut(s) 364
PscI ACATGT 1 cut(s) 453
Psp124BI GAGCTC 1 cut(s) 915
Psp5II RGGWCCY 1 cut(s) 364
Psp6I CCWGG 2 cut(s) 234, 1139
PspGI CCWGG 2 cut(s) 234, 1139
PspN4I GGNNCC 3 cut(s) 649, 887, 1068
PspPI GGNCC 4 cut(s) 143, 364, 1067, 1191
PspPPI RGGWCCY 1 cut(s) 364
PspXI VCTCGAGB 1 cut(s) 491
PvuII CAGCTG 1 cut(s) 770
RsaI GTAC 1 cut(s) 1230
RsaNI GTAC 1 cut(s) 1229
RseI CAYNNNNRTG 1 cut(s) 458
SacI GAGCTC 1 cut(s) 915
SatI GCNGC 1 cut(s) 768
Sau3AI GATC 2 cut(s) 184, 919
Sau96I GGNCC 4 cut(s) 143, 364, 1067, 1191
ScaI AGTACT 1 cut(s) 1230
SchI GAGTC 4 cut(s) 17, 168, 783, 1019
ScrFI CCNGG 2 cut(s) 236, 1141
SduI GDGCHC 2 cut(s) 915, 1254
SfaNI GCATC 2 cut(s) 324, 450
SfcI CTRYAG 1 cut(s) 76
Sfr274I CTCGAG 1 cut(s) 491
SinI GGWCC 2 cut(s) 143, 364
SlaI CTCGAG 1 cut(s) 491
SmiMI CAYNNNNRTG 1 cut(s) 458
SmlI CTYRAG 3 cut(s) 491, 1007, 1242
SmoI CTYRAG 3 cut(s) 491, 1007, 1242
Sse9I AATT 8 cut(s) 305, 348, 818, 840, 983, 1042, 1087, 1276
SseBI AGGCCT 1 cut(s) 168
SsiI CCGC 1 cut(s) 196
SspI AATATT 1 cut(s) 1267
SspMI CTAG 5 cut(s) 140, 170, 993, 1199, 1226
SstI GAGCTC 1 cut(s) 915
StuI AGGCCT 1 cut(s) 168
StyD4I CCNGG 2 cut(s) 234, 1139
StyI CCWWGG 3 cut(s) 154, 177, 425
TaaI ACNGT 2 cut(s) 358, 849
TaiI ACGT 3 cut(s) 100, 105, 862
TaqI TCGA 7 cut(s) 162, 492, 537, 585, 729, 866, 951
TasI AATT 8 cut(s) 305, 348, 818, 840, 983, 1042, 1087, 1276
TatI WGTACW 1 cut(s) 1228
TfiI GAWTC 4 cut(s) 82, 148, 276, 1002
TscAI CASTG 3 cut(s) 396, 615, 1041
TseFI GTSAC 3 cut(s) 9, 98, 1036
TseI GCWGC 1 cut(s) 767
Tsp45I GTSAC 3 cut(s) 9, 98, 1036
TspDTI ATGAA 2 cut(s) 934, 1137
TspGWI ACGGA 2 cut(s) 269, 1176
TspRI CASTG 3 cut(s) 396, 615, 1041
VpaK11BI GGWCC 2 cut(s) 143, 364
XapI RAATTY 5 cut(s) 305, 348, 840, 1042, 1087
XceI RCATGY 2 cut(s) 17, 457
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XhoI CTCGAG 1 cut(s) 491
XmiI GTMKAC 1 cut(s) 742
XmnI GAANNNNTTC 2 cut(s) 209, 280
XspI CTAG 5 cut(s) 140, 170, 993, 1199, 1226
ZrmI AGTACT 1 cut(s) 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.