Rroxscaffold_6G00405820

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000131
Physical Location & Seq
Forward (+)
28301859 .. 28306730
4872 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00405820.1

Sequence Viewer

Length: 1356 bp
ATGCTACGAGATGATGAAGATGATTTATTCATCGGGGCGAGGCAGAACTTCTCATGCTCAGCTGAAGGTCAGGTCGATGATCTTGCGTCAAAATCAGTAGATAATGTTGATAGGACTGCTGGACCAACATTGCCTGATCAGAGCCCGGGGGATCAAACAACAATGCGTGAACAAAATGTGAGTGATCCTATTGCAATTATAATAATGGATAAAGTTACAAACATGCCTAAATTTTGGCCCGACTGTTCTATATATAAAGTCTCCGGGAGATTGTCCAAAGGATACGAAGACTTCTACACACCTCGAGTGGTCTCAATTGGACCTTATCACTATAGCAATGGAGGAAGTACGGAAGGAATGGAAGCCTATAAATTCAAATATCTGGAGGCGTTTTTCAGTCGGAACAACTTGAACTTGGACCACTGTCTTGGAGTTGTAAGAAAGCTAGAAGGAGAAGCCAGGAGTTATTATGTTGAGCCAGTTAAACTAAACAGGGATGAATTTGCTTTAATGTTGCTGGTGGATGGAACTTTCCTTCTGGAGCTAATGCTTAGGCGTTACTTTGCTAAATTTGTCGATGATTGTGATCGGATATATGGCAAGCCGAGAGTGATTCAGGATGCTTTGTATATGGAATTGGATAGGAAGACGGGGGCAGACCAGCCATCTCTTGTGACGCTTACACATGAGTTCTTTAAGTATTTGGGGAAAGTTGACAAGTTTCCTGGTCCCGAGAAAGTAAAGCATTTTGTTGATTTTATCCGATACTACTACTTGCCCAAGTGTGACAGCAAGAGTGACGATGAGATTATCAATGACGTTCCAAATGTAACAGCAATGGATGAGGCTGGAGTTCAGTTTGAGGGACGGAAGGAATTGACCATATCGCTTGACATAGAATTCACTAATGGCTCTCTGCGAATTCCGCAATTCATAGTAGATGATTGGACCGAGACTCTCTTCAGGAATCTCATCGCGTTTGAGCAATGCCATGATCACAAAGTAAAGTACATCTCACAGTTTATGTTCCTCATGGGGTGTATGATCAGGACTCCAAAGGATGCAGATTTACTCGTCAATCGCGAAATTGTATCTTGCAGGCTAGGGAATAGTGAAGATATTTCGACTATATTCAACAATATTTGCAAAGGAGTGAGCTTGGATAGTCCATTCTATTACTTCACTCTTTGTAAAGATCTGAATGCATATTGCAGGAGCCCATGGCACAGTTCGAAAGCAACTCTGAAGAGGGACTATTTCAACACTCCATGGAAACTGGTTTCTACAATTGCAGCATTTGTATTGCTTGTCCTCACTGTTATACAAACAGTGTGCTCCATCATATCCGTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

451

Amino Acids

51.68

Weight (kDa)

5.22

Isoelectric Point (pI)

29.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 84 - 438 4.4e-87 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 200
AccII CGCG 2 cut(s) 977, 1083
AciI CCGC 1 cut(s) 926
AclWI GGATC 2 cut(s) 159, 179
AcsI RAATTY 6 cut(s) 230, 371, 500, 569, 899, 921
AcuI CTGAAG 3 cut(s) 84, 946, 1265
AfaI GTAC 2 cut(s) 349, 1010
AgsI TTSAA 4 cut(s) 376, 412, 1135, 1261
AjnI CCWGG 2 cut(s) 458, 724
AluBI AGCT 4 cut(s) 62, 445, 544, 1158
AluI AGCT 4 cut(s) 62, 445, 544, 1158
Alw21I GWGCWC 1 cut(s) 1337
Alw26I GTCTC 3 cut(s) 265, 316, 947
AlwI GGATC 2 cut(s) 159, 179
Ama87I CYCGRG 3 cut(s) 145, 303, 731
AoxI GGCC 1 cut(s) 236
ApeKI GCWGC 1 cut(s) 1292
ApoI RAATTY 6 cut(s) 230, 371, 500, 569, 899, 921
AspS9I GGNCC 6 cut(s) 122, 237, 320, 418, 728, 948
AsuC2I CCSGG 3 cut(s) 146, 147, 265
AsuII TTCGAA 1 cut(s) 1232
AvaI CYCGRG 3 cut(s) 145, 303, 731
AvaII GGWCC 5 cut(s) 122, 320, 418, 728, 948
BanII GRGCYC 2 cut(s) 146, 1220
BbsI GAAGAC 2 cut(s) 294, 653
Bbv12I GWGCWC 1 cut(s) 1337
BbvI GCAGC 1 cut(s) 1304
BccI CCATC 3 cut(s) 518, 673, 1346
BcgI CGANNNNNNTGC 2 cut(s) 65, 99
BciT130I CCWGG 2 cut(s) 460, 726
BciVI GTATCC 1 cut(s) 275
BclI TGATCA 3 cut(s) 136, 994, 1044
BcnI CCSGG 3 cut(s) 146, 147, 265
BcoDI GTCTC 3 cut(s) 265, 316, 947
BfaI CTAG 2 cut(s) 446, 1103
BfmI CTRYAG 1 cut(s) 331
BfuI GTATCC 1 cut(s) 275
BglII AGATCT 1 cut(s) 1195
BisI GCNGC 1 cut(s) 1293
BlpI GCTNAGC 1 cut(s) 58
BlsI GCNGC 1 cut(s) 1294
Bme1390I CCNGG 5 cut(s) 146, 147, 265, 460, 726
Bme18I GGWCC 5 cut(s) 122, 320, 418, 728, 948
BmeT110I CYCGRG 3 cut(s) 145, 303, 731
BmgT120I GGNCC 6 cut(s) 122, 237, 320, 418, 728, 948
BmiI GGNNCC 2 cut(s) 730, 1217
BmrFI CCNGG 5 cut(s) 146, 147, 265, 460, 726
BmsI GCATC 2 cut(s) 610, 1051
BoxI GACNNNNGTC 1 cut(s) 423
BpiI GAAGAC 2 cut(s) 294, 653
BpmI CTGGAG 3 cut(s) 404, 560, 870
Bpu10I CCTNAGC 1 cut(s) 551
Bpu1102I GCTNAGC 1 cut(s) 58
Bpu14I TTCGAA 1 cut(s) 1232
BpuMI CCSGG 3 cut(s) 146, 147, 265
BsaBI GATNNNNATC 1 cut(s) 585
BsaI GGTCTC 1 cut(s) 316
BsaJI CCNNGG 4 cut(s) 145, 146, 1220, 1268
Bse1I ACTGG 2 cut(s) 479, 1281
Bse3DI GCAATG 4 cut(s) 128, 343, 843, 992
Bse8I GATNNNNATC 1 cut(s) 585
BseBI CCWGG 2 cut(s) 460, 726
BseDI CCNNGG 4 cut(s) 145, 146, 1220, 1268
BseGI GGATG 5 cut(s) 502, 529, 625, 847, 1066
BseJI GATNNNNATC 1 cut(s) 585
BseMI GCAATG 4 cut(s) 128, 343, 843, 992
BseMII CTCAG 1 cut(s) 72
BseNI ACTGG 2 cut(s) 479, 1281
BseXI GCAGC 1 cut(s) 1304
Bsh1236I CGCG 2 cut(s) 977, 1083
BshFI GGCC 1 cut(s) 238
BsiHKAI GWGCWC 1 cut(s) 1337
BsiHKCI CYCGRG 3 cut(s) 145, 303, 731
BsiSI CCGG 2 cut(s) 146, 264
BslFI GGGAC 3 cut(s) 714, 879, 1265
BsmAI GTCTC 3 cut(s) 265, 316, 947
BsmFI GGGAC 3 cut(s) 714, 879, 1265
BsmI GAATGC 1 cut(s) 1207
BsnI GGCC 1 cut(s) 238
Bso31I GGTCTC 1 cut(s) 316
BsoBI CYCGRG 3 cut(s) 145, 303, 731
Bsp119I TTCGAA 1 cut(s) 1232
Bsp1286I GDGCHC 3 cut(s) 146, 1220, 1337
Bsp143I GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
Bsp1720I GCTNAGC 1 cut(s) 58
Bsp19I CCATGG 2 cut(s) 1220, 1268
Bsp68I TCGCGA 1 cut(s) 1083
BspACI CCGC 1 cut(s) 926
BspANI GGCC 1 cut(s) 238
BspCNI CTCAG 1 cut(s) 71
BspFNI CGCG 2 cut(s) 977, 1083
BspLI GGNNCC 2 cut(s) 730, 1217
BspPI GGATC 2 cut(s) 159, 179
BspT104I TTCGAA 1 cut(s) 1232
BspTNI GGTCTC 1 cut(s) 316
BsrDI GCAATG 4 cut(s) 128, 343, 843, 992
BsrI ACTGG 2 cut(s) 479, 1281
BssECI CCNNGG 4 cut(s) 145, 146, 1220, 1268
BssMI GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
BssT1I CCWWGG 2 cut(s) 1220, 1268
Bst2UI CCWGG 2 cut(s) 460, 726
Bst4CI ACNGT 6 cut(s) 245, 425, 1020, 1229, 1318, 1330
Bst6I CTCTTC 2 cut(s) 965, 1241
BstBI TTCGAA 1 cut(s) 1232
BstC8I GCNNGC 2 cut(s) 602, 1100
BstDEI CTNAG 2 cut(s) 58, 551
BstDSI CCRYGG 2 cut(s) 1220, 1268
BstF5I GGATG 5 cut(s) 502, 529, 625, 847, 1066
BstFNI CGCG 2 cut(s) 977, 1083
BstKTI GATC 8 cut(s) 82, 139, 154, 187, 589, 997, 1047, 1198
BstMAI GTCTC 3 cut(s) 265, 316, 947
BstMBI GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
BstMWI GCNNNNNNNGC 1 cut(s) 925
BstNI CCWGG 2 cut(s) 460, 726
BstNSI RCATGY 1 cut(s) 226
BstPAI GACNNNNGTC 1 cut(s) 423
BstSCI CCNGG 5 cut(s) 144, 145, 263, 458, 724
BstSFI CTRYAG 1 cut(s) 331
BstUI CGCG 2 cut(s) 977, 1083
BstV1I GCAGC 1 cut(s) 1304
BstV2I GAAGAC 2 cut(s) 294, 653
BstX2I RGATCY 1 cut(s) 1195
BstXI CCANNNNNNTGG 1 cut(s) 428
BstYI RGATCY 1 cut(s) 1195
BsuI GTATCC 1 cut(s) 275
BsuRI GGCC 1 cut(s) 238
BtgI CCRYGG 2 cut(s) 1220, 1268
BtgZI GCGATG 1 cut(s) 958
BtsCI GGATG 5 cut(s) 502, 529, 625, 847, 1066
BtsIMutI CAGTG 3 cut(s) 421, 1314, 1335
BtuMI TCGCGA 1 cut(s) 1083
Cac8I GCNNGC 2 cut(s) 602, 1100
Cfr13I GGNCC 6 cut(s) 122, 237, 320, 418, 728, 948
Cfr9I CCCGGG 1 cut(s) 145
CseI GACGC 2 cut(s) 75, 685
Csp6I GTAC 2 cut(s) 348, 1009
CviAII CATG 7 cut(s) 54, 223, 686, 992, 1033, 1221, 1269
CviQI GTAC 2 cut(s) 348, 1009
DdeI CTNAG 2 cut(s) 58, 551
DpnI GATC 8 cut(s) 81, 138, 153, 186, 588, 996, 1046, 1197
DpnII GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
Eam1104I CTCTTC 2 cut(s) 965, 1241
EarI CTCTTC 2 cut(s) 965, 1241
Eco130I CCWWGG 2 cut(s) 1220, 1268
Eco24I GRGCYC 2 cut(s) 146, 1220
Eco31I GGTCTC 1 cut(s) 316
Eco47I GGWCC 5 cut(s) 122, 320, 418, 728, 948
Eco57I CTGAAG 3 cut(s) 84, 946, 1265
Eco88I CYCGRG 3 cut(s) 145, 303, 731
EcoRI GAATTC 2 cut(s) 899, 921
EcoRII CCWGG 2 cut(s) 458, 724
EcoT14I CCWWGG 2 cut(s) 1220, 1268
EcoT22I ATGCAT 1 cut(s) 1207
EcoT38I GRGCYC 2 cut(s) 146, 1220
ErhI CCWWGG 2 cut(s) 1220, 1268
FaeI CATG 7 cut(s) 57, 226, 689, 995, 1036, 1224, 1272
FaqI GGGAC 3 cut(s) 714, 879, 1265
FatI CATG 7 cut(s) 53, 222, 685, 991, 1032, 1220, 1268
FbaI TGATCA 3 cut(s) 136, 994, 1044
Fnu4HI GCNGC 1 cut(s) 1293
FokI GGATG 5 cut(s) 509, 536, 632, 854, 1073
FriOI GRGCYC 2 cut(s) 146, 1220
Fsp4HI GCNGC 1 cut(s) 1293
FspBI CTAG 2 cut(s) 446, 1103
GluI GCNGC 1 cut(s) 1293
GsuI CTGGAG 3 cut(s) 404, 560, 870
HaeIII GGCC 1 cut(s) 238
HapII CCGG 2 cut(s) 146, 264
HgaI GACGC 2 cut(s) 75, 685
Hin1II CATG 7 cut(s) 57, 226, 689, 995, 1036, 1224, 1272
HincII GTYRAC 1 cut(s) 715
HindII GTYRAC 1 cut(s) 715
HinfI GANTC 4 cut(s) 613, 955, 967, 1051
HpaII CCGG 2 cut(s) 146, 264
Hpy166II GTNNAC 2 cut(s) 170, 715
Hpy188I TCNGA 6 cut(s) 141, 402, 591, 764, 1200, 1245
Hpy188III TCNNGA 7 cut(s) 383, 539, 617, 731, 964, 1048, 1082
Hpy8I GTNNAC 2 cut(s) 170, 715
HpyAV CCTTC 5 cut(s) 59, 347, 443, 545, 865
HpyCH4III ACNGT 6 cut(s) 245, 425, 1020, 1229, 1318, 1330
HpyCH4IV ACGT 1 cut(s) 819
HpyCH4V TGCA 7 cut(s) 194, 1064, 1098, 1146, 1205, 1212, 1292
HpyF10VI GCNNNNNNNGC 1 cut(s) 925
HpyF3I CTNAG 2 cut(s) 58, 551
HpySE526I ACGT 1 cut(s) 819
Hsp92II CATG 7 cut(s) 57, 226, 689, 995, 1036, 1224, 1272
Ksp22I TGATCA 3 cut(s) 136, 994, 1044
Kzo9I GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
LmnI GCTCC 3 cut(s) 541, 1215, 1340
Lsp1109I GCAGC 1 cut(s) 1304
LweI GCATC 2 cut(s) 610, 1051
MaeI CTAG 2 cut(s) 446, 1103
MaeII ACGT 1 cut(s) 819
MaeIII GTNAC 6 cut(s) 214, 557, 673, 785, 797, 829
MalI GATC 8 cut(s) 81, 138, 153, 186, 588, 996, 1046, 1197
MboI GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
MboII GAAGA 6 cut(s) 29, 299, 658, 952, 1127, 1258
MfeI CAATTG 2 cut(s) 315, 1287
MflI RGATCY 1 cut(s) 1195
MhlI GDGCHC 3 cut(s) 146, 1220, 1337
MlyI GAGTC 2 cut(s) 949, 1045
MmeI TCCRAC 1 cut(s) 380
MnlI CCTC 9 cut(s) 33, 312, 335, 379, 838, 856, 1040, 1242, 1322
Mph1103I ATGCAT 1 cut(s) 1207
MseI TTAA 4 cut(s) 483, 509, 696, 1354
MspA1I CMGCKG 1 cut(s) 62
MspI CCGG 2 cut(s) 146, 264
MspR9I CCNGG 5 cut(s) 146, 147, 265, 460, 726
MunI CAATTG 2 cut(s) 315, 1287
Mva1269I GAATGC 1 cut(s) 1207
MvaI CCWGG 2 cut(s) 460, 726
MvnI CGCG 2 cut(s) 977, 1083
MwoI GCNNNNNNNGC 1 cut(s) 925
NciI CCSGG 3 cut(s) 146, 147, 265
NcoI CCATGG 2 cut(s) 1220, 1268
NdeII GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
NlaIII CATG 7 cut(s) 57, 226, 689, 995, 1036, 1224, 1272
NlaIV GGNNCC 2 cut(s) 730, 1217
NmeAIII GCCGAG 1 cut(s) 630
NmuCI GTSAC 3 cut(s) 673, 785, 797
NruI TCGCGA 1 cut(s) 1083
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 1 cut(s) 226
NspV TTCGAA 1 cut(s) 1232
PaeR7I CTCGAG 1 cut(s) 303
PcsI WCGNNNNNNNCGW 1 cut(s) 1080
PctI GAATGC 1 cut(s) 1207
PfeI GAWTC 2 cut(s) 613, 967
PfoI TCCNGGA 1 cut(s) 263
PkrI GCNGC 1 cut(s) 1294
PleI GAGTC 2 cut(s) 949, 1045
PpsI GAGTC 2 cut(s) 949, 1045
PshAI GACNNNNGTC 1 cut(s) 423
PsiI TTATAA 1 cut(s) 200
Psp6I CCWGG 2 cut(s) 458, 724
PspGI CCWGG 2 cut(s) 458, 724
PspN4I GGNNCC 2 cut(s) 730, 1217
PspPI GGNCC 6 cut(s) 122, 237, 320, 418, 728, 948
PspXI VCTCGAGB 1 cut(s) 303
PsuI RGATCY 1 cut(s) 1195
PvuII CAGCTG 1 cut(s) 62
RruI TCGCGA 1 cut(s) 1083
RsaI GTAC 2 cut(s) 349, 1010
RsaNI GTAC 2 cut(s) 348, 1009
SaqAI TTAA 4 cut(s) 483, 509, 696, 1354
SatI GCNGC 1 cut(s) 1293
Sau3AI GATC 8 cut(s) 79, 136, 151, 184, 586, 994, 1044, 1195
Sau96I GGNCC 6 cut(s) 122, 237, 320, 418, 728, 948
SchI GAGTC 2 cut(s) 949, 1045
ScrFI CCNGG 5 cut(s) 146, 147, 265, 460, 726
SduI GDGCHC 3 cut(s) 146, 1220, 1337
SetI ASST 9 cut(s) 64, 70, 75, 304, 325, 447, 546, 822, 1160
SfaNI GCATC 2 cut(s) 610, 1051
SfcI CTRYAG 1 cut(s) 331
Sfr274I CTCGAG 1 cut(s) 303
SfuI TTCGAA 1 cut(s) 1232
SinI GGWCC 5 cut(s) 122, 320, 418, 728, 948
SlaI CTCGAG 1 cut(s) 303
SmaI CCCGGG 1 cut(s) 147
SmlI CTYRAG 1 cut(s) 303
SmoI CTYRAG 1 cut(s) 303
SsiI CCGC 1 cut(s) 926
SspI AATATT 1 cut(s) 1141
SspMI CTAG 2 cut(s) 446, 1103
StyD4I CCNGG 5 cut(s) 144, 145, 263, 458, 724
StyI CCWWGG 2 cut(s) 1220, 1268
TaaI ACNGT 6 cut(s) 245, 425, 1020, 1229, 1318, 1330
TaiI ACGT 1 cut(s) 822
TaqI TCGA 5 cut(s) 75, 304, 576, 1124, 1232
TaqII GACCGA 1 cut(s) 965
TatI WGTACW 1 cut(s) 1008
TfiI GAWTC 2 cut(s) 613, 967
Tru1I TTAA 4 cut(s) 483, 509, 696, 1354
Tru9I TTAA 4 cut(s) 483, 509, 696, 1354
TscAI CASTG 3 cut(s) 428, 1321, 1335
TseFI GTSAC 3 cut(s) 673, 785, 797
TseI GCWGC 1 cut(s) 1292
Tsp45I GTSAC 3 cut(s) 673, 785, 797
TspDTI ATGAA 4 cut(s) 19, 30, 513, 922
TspGWI ACGGA 3 cut(s) 365, 883, 1336
TspMI CCCGGG 1 cut(s) 145
TspRI CASTG 3 cut(s) 428, 1321, 1335
VpaK11BI GGWCC 5 cut(s) 122, 320, 418, 728, 948
XapI RAATTY 6 cut(s) 230, 371, 500, 569, 899, 921
XceI RCATGY 1 cut(s) 226
XhoI CTCGAG 1 cut(s) 303
XmaI CCCGGG 1 cut(s) 145
XspI CTAG 2 cut(s) 446, 1103
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.