MD15G1101800.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000131
Physical Location & Seq
Forward (+)
7200180 .. 7204462
4283 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1101800.v1.1.491

Sequence Viewer

Length: 1374 bp
ATGCCAAAGGAAAGTGAGGCTGAAATTGAAAGTGATGATCAAAGAACGATCTCAGCCGTTAAAATGGCACATGACATGGAAAAGCAGTGGCGTAATTTGTCTGAACTGTCCGGTGAGCGGTGTATCTATAGAGTTCCTGAGCGTCTACGGCAAGTAAATGAGAAAGCATATACACCTCAAGTAGTCTCTATAGGCCCACTTCACCATGACAACAAAAGCTTAAAAGCCATGGAAGAGCACAAATTAAGGTACCTGCGACATTTTCTAAGTCGAACACGGGTAAGACTGTTTGATTATATACAAATGGTGCAGCGCCAAGAGGAAAGGTTGCGAGGTTCTTATGCAGAACCCATTGTGTTTGACAAGGATGAATTTGTAAGAATTGTTTCAGTGGATGCCGCCTTCGTCCTTGAGGTATTATTGAGGTTTCATTACTCAAATTATACAAAGGAAGATGATTACATATTCAAAAATCCTACAATGAAAGAGGATGTGGTTCGAGATTTGAAGTTGCTTGAAAATCAGCTGCCATTCTTCATTCTTCAAGATCTTTTCACATTTTTTCCTTATTCACCTGAGCATCCTTCGTTACTTAAAATTTCCTGCACTTTTTTCCAAAGCCAAATCGATAGCAAGGGAAAAGAGAAATATGACGAGATAGGAGTAGAAGTGAAACATTTTGTTGATCTGATAAGAATTCTATACCTACAAATGAAACCCAAAACTACAGACACACCCAAAACCACTTTGTGCGACCGGATGCAAGTGCGCTTATCTCACTCAATCTTTCTGACGTCTGGGTATACACCCAACGCCACAGCCACACCCAACGTGACAGAGCTACACCAGGCTGGAGTCAAGTTTAAGGAAGGAAAAGACAGCAGGTTAATTGACATAAAATTCTCGAGTGGGATCCTCGGAATTTGTGGGATCCTCGAAATTCCAAAGTTAAGAGTGGACGATACCACAGATCTGACACTCAGAAATCTCCTTGCTTTTGAACAATGCCATCACCGAGGGAAGGATTACCTAGCTAATTATGTTTTCCTTATGAAGCGTCTCGTTAAAACCCAAGATGATGTGCAATTGCTTGCTGAGAAGGGAATTATTGATAATTGGCTAGTTGATACCCAGAAGGTATCTACTTTGCTTCGTGACCTTGGCACCGGGATGTTAGTTGACAACAGCCATTATGCCACTCTTCTTGAAGAACTGACGAATCACCGCGCAAAGCACTGGCCCAAATGGATGGTAATTTTGAAGCAAAATTATTTTAACTCGCCTTGGTCCACTATTTCTGTTGCTGCGGCTGTTATTCTCCTCATACTCACTCTCTTACAAACAGTGTGCTCTCTTAAATCTGTCCCGCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

458

Amino Acids

53.13

Weight (kDa)

7.67

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 42 - 443 1.3e-115 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 797
Acc36I ACCTGC 2 cut(s) 261, 873
Acc65I GGTACC 1 cut(s) 249
AccB1I GGYRCC 2 cut(s) 249, 1163
AccBSI CCGCTC 2 cut(s) 118, 1369
AccI GTMKAC 2 cut(s) 145, 803
AccII CGCG 1 cut(s) 1227
AciI CCGC 5 cut(s) 118, 399, 1225, 1307, 1367
AclWI GGATC 4 cut(s) 907, 920, 925, 938
AcsI RAATTY 6 cut(s) 371, 597, 696, 899, 921, 939
AcyI GRCGYC 1 cut(s) 794
AdeI CACNNNGTG 1 cut(s) 750
AfaI GTAC 1 cut(s) 251
AfiI CCNNNNNNNGG 2 cut(s) 117, 1021
AgsI TTSAA 8 cut(s) 29, 469, 508, 518, 545, 1001, 1208, 1261
AjnI CCWGG 1 cut(s) 846
AluBI AGCT 4 cut(s) 219, 526, 841, 1034
AluI AGCT 4 cut(s) 219, 526, 841, 1034
Alw21I GWGCWC 2 cut(s) 240, 1352
Alw26I GTCTC 2 cut(s) 190, 1064
AlwI GGATC 4 cut(s) 907, 920, 925, 938
Ama87I CYCGRG 1 cut(s) 904
AoxI GGCC 2 cut(s) 193, 1238
ApeKI GCWGC 3 cut(s) 310, 526, 1304
ApoI RAATTY 6 cut(s) 371, 597, 696, 899, 921, 939
Asp700I GAANNNNTTC 1 cut(s) 385
Asp718I GGTACC 1 cut(s) 249
AspLEI GCGC 3 cut(s) 315, 771, 1229
AspS9I GGNCC 3 cut(s) 194, 1239, 1287
AsuC2I CCSGG 1 cut(s) 1168
AsuHPI GGTGA 5 cut(s) 125, 194, 564, 1004, 1214
AvaI CYCGRG 1 cut(s) 904
AvaII GGWCC 1 cut(s) 1287
BamHI GGATCC 2 cut(s) 912, 930
BanI GGYRCC 2 cut(s) 249, 1163
Bbv12I GWGCWC 2 cut(s) 240, 1352
BbvI GCAGC 3 cut(s) 322, 513, 1291
BccI CCATC 2 cut(s) 1017, 1243
BceAI ACGGC 2 cut(s) 41, 164
BciT130I CCWGG 1 cut(s) 848
BclI TGATCA 1 cut(s) 37
BcnI CCSGG 1 cut(s) 1168
BcoDI GTCTC 2 cut(s) 190, 1064
BfaI CTAG 3 cut(s) 1031, 1121, 1372
BfmI CTRYAG 3 cut(s) 127, 189, 726
BfoI RGCGCY 1 cut(s) 316
BfuAI ACCTGC 2 cut(s) 261, 873
BglII AGATCT 2 cut(s) 547, 970
BisI GCNGC 5 cut(s) 311, 399, 527, 1305, 1308
BlsI GCNGC 5 cut(s) 312, 400, 528, 1306, 1309
Bme1390I CCNGG 2 cut(s) 848, 1168
Bme18I GGWCC 1 cut(s) 1287
BmeT110I CYCGRG 1 cut(s) 904
BmgT120I GGNCC 3 cut(s) 194, 1239, 1287
BmiI GGNNCC 4 cut(s) 251, 914, 932, 1165
BmrFI CCNGG 2 cut(s) 848, 1168
BmsI GCATC 3 cut(s) 385, 589, 750
BpmI CTGGAG 1 cut(s) 873
Bpu10I CCTNAGC 2 cut(s) 138, 576
BpuEI CTTGAG 2 cut(s) 162, 431
BpuMI CCSGG 1 cut(s) 1168
Bsa29I ATCGAT 1 cut(s) 627
BsaHI GRCGYC 1 cut(s) 794
BsaJI CCNNGG 5 cut(s) 228, 916, 1015, 1159, 1283
BsaWI WCCGGW 2 cut(s) 110, 756
BsaXI ACNNNNNCTCC 2 cut(s) 654, 684
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 1021
Bse1I ACTGG 1 cut(s) 1241
BseBI CCWGG 1 cut(s) 848
BseCI ATCGAT 1 cut(s) 627
BseDI CCNNGG 5 cut(s) 228, 916, 1015, 1159, 1283
BseGI GGATG 7 cut(s) 373, 400, 496, 580, 765, 1176, 1254
BseLI CCNNNNNNNGG 2 cut(s) 117, 1021
BseMII CTCAG 5 cut(s) 66, 129, 567, 994, 1086
BseNI ACTGG 1 cut(s) 1241
BseRI GAGGAG 1 cut(s) 1310
BseXI GCAGC 3 cut(s) 322, 513, 1291
BsgI GTGCAG 2 cut(s) 329, 589
Bsh1236I CGCG 1 cut(s) 1227
Bsh1285I CGRYCG 1 cut(s) 757
BshFI GGCC 2 cut(s) 195, 1240
BshNI GGYRCC 2 cut(s) 249, 1163
BshVI ATCGAT 1 cut(s) 627
BsiEI CGRYCG 1 cut(s) 757
BsiHKAI GWGCWC 2 cut(s) 240, 1352
BsiHKCI CYCGRG 1 cut(s) 904
BsiSI CCGG 3 cut(s) 111, 757, 1167
BslFI GGGAC 1 cut(s) 1349
BslI CCNNNNNNNGG 2 cut(s) 117, 1021
BsmAI GTCTC 2 cut(s) 190, 1064
BsmBI CGTCTC 1 cut(s) 1064
BsmFI GGGAC 1 cut(s) 1349
BsnI GGCC 2 cut(s) 195, 1240
BsoBI CYCGRG 1 cut(s) 904
Bsp1286I GDGCHC 2 cut(s) 240, 1352
Bsp143I GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
Bsp19I CCATGG 1 cut(s) 228
BspACI CCGC 5 cut(s) 118, 399, 1225, 1307, 1367
BspANI GGCC 2 cut(s) 195, 1240
BspCNI CTCAG 5 cut(s) 65, 130, 568, 993, 1087
BspDI ATCGAT 1 cut(s) 627
BspFNI CGCG 1 cut(s) 1227
BspLI GGNNCC 4 cut(s) 251, 914, 932, 1165
BspMI ACCTGC 2 cut(s) 261, 873
BspPI GGATC 4 cut(s) 907, 920, 925, 938
BspQI GCTCTTC 1 cut(s) 228
BspT107I GGYRCC 2 cut(s) 249, 1163
BsrBI CCGCTC 2 cut(s) 118, 1369
BsrI ACTGG 1 cut(s) 1241
BssECI CCNNGG 5 cut(s) 228, 916, 1015, 1159, 1283
BssMI GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
BssNAI GTATAC 1 cut(s) 804
BssNI GRCGYC 1 cut(s) 794
BssT1I CCWWGG 3 cut(s) 228, 1159, 1283
Bst1107I GTATAC 1 cut(s) 804
Bst2UI CCWGG 1 cut(s) 848
Bst4CI ACNGT 3 cut(s) 108, 288, 1345
Bst6I CTCTTC 2 cut(s) 228, 1206
BstACI GRCGYC 1 cut(s) 794
BstC8I GCNNGC 1 cut(s) 1092
BstDEI CTNAG 6 cut(s) 52, 138, 266, 576, 980, 1095
BstDSI CCRYGG 1 cut(s) 228
BstF5I GGATG 7 cut(s) 373, 400, 496, 580, 765, 1176, 1254
BstFNI CGCG 1 cut(s) 1227
BstH2I RGCGCY 1 cut(s) 316
BstHHI GCGC 3 cut(s) 315, 771, 1229
BstKTI GATC 7 cut(s) 40, 51, 550, 688, 915, 933, 973
BstMAI GTCTC 2 cut(s) 190, 1064
BstMBI GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
BstMCI CGRYCG 1 cut(s) 757
BstMWI GCNNNNNNNGC 1 cut(s) 148
BstNI CCWGG 1 cut(s) 848
BstSCI CCNGG 2 cut(s) 846, 1166
BstSFI CTRYAG 3 cut(s) 127, 189, 726
BstUI CGCG 1 cut(s) 1227
BstV1I GCAGC 3 cut(s) 322, 513, 1291
BstX2I RGATCY 4 cut(s) 547, 912, 930, 970
BstXI CCANNNNNNTGG 1 cut(s) 1249
BstYI RGATCY 4 cut(s) 547, 912, 930, 970
BstZ17I GTATAC 1 cut(s) 804
Bsu15I ATCGAT 1 cut(s) 627
BsuRI GGCC 2 cut(s) 195, 1240
BsuTUI ATCGAT 1 cut(s) 627
BtgI CCRYGG 1 cut(s) 228
BtsCI GGATG 7 cut(s) 373, 400, 496, 580, 765, 1176, 1254
BtsI GCAGTG 1 cut(s) 92
BtsIMutI CAGTG 4 cut(s) 92, 396, 1234, 1350
BveI ACCTGC 2 cut(s) 261, 873
Cac8I GCNNGC 1 cut(s) 1092
CfoI GCGC 3 cut(s) 315, 771, 1229
Cfr13I GGNCC 3 cut(s) 194, 1239, 1287
ClaI ATCGAT 1 cut(s) 627
CseI GACGC 2 cut(s) 131, 1046
Csp6I GTAC 1 cut(s) 250
CspCI CAANNNNNGTGG 2 cut(s) 1186, 1221
CviAII CATG 4 cut(s) 71, 76, 206, 229
CviQI GTAC 1 cut(s) 250
DdeI CTNAG 6 cut(s) 52, 138, 266, 576, 980, 1095
DpnI GATC 7 cut(s) 39, 50, 549, 687, 914, 932, 972
DpnII GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
DraIII CACNNNGTG 1 cut(s) 750
Eam1104I CTCTTC 2 cut(s) 228, 1206
EarI CTCTTC 2 cut(s) 228, 1206
Eco130I CCWWGG 3 cut(s) 228, 1159, 1283
Eco47I GGWCC 1 cut(s) 1287
Eco88I CYCGRG 1 cut(s) 904
EcoRI GAATTC 1 cut(s) 696
EcoRII CCWGG 1 cut(s) 846
EcoT14I CCWWGG 3 cut(s) 228, 1159, 1283
ErhI CCWWGG 3 cut(s) 228, 1159, 1283
Esp3I CGTCTC 1 cut(s) 1064
FaeI CATG 4 cut(s) 74, 79, 209, 232
FaqI GGGAC 1 cut(s) 1349
FatI CATG 4 cut(s) 70, 75, 205, 228
FbaI TGATCA 1 cut(s) 37
FblI GTMKAC 2 cut(s) 145, 803
Fnu4HI GCNGC 5 cut(s) 311, 399, 527, 1305, 1308
FokI GGATG 7 cut(s) 380, 407, 503, 567, 772, 1183, 1261
Fsp4HI GCNGC 5 cut(s) 311, 399, 527, 1305, 1308
FspBI CTAG 3 cut(s) 1031, 1121, 1372
GlaI GCGC 3 cut(s) 314, 770, 1228
GluI GCNGC 5 cut(s) 311, 399, 527, 1305, 1308
GsuI CTGGAG 1 cut(s) 873
HaeII RGCGCY 1 cut(s) 316
HaeIII GGCC 2 cut(s) 195, 1240
HapII CCGG 3 cut(s) 111, 757, 1167
HgaI GACGC 2 cut(s) 131, 1046
HhaI GCGC 3 cut(s) 315, 771, 1229
Hin1I GRCGYC 1 cut(s) 794
Hin1II CATG 4 cut(s) 74, 79, 209, 232
Hin6I GCGC 3 cut(s) 313, 769, 1227
HinP1I GCGC 3 cut(s) 313, 769, 1227
HincII GTYRAC 1 cut(s) 1180
HindII GTYRAC 1 cut(s) 1180
HindIII AAGCTT 1 cut(s) 217
HinfI GANTC 2 cut(s) 855, 1219
HpaII CCGG 3 cut(s) 111, 757, 1167
HphI GGTGA 5 cut(s) 125, 194, 564, 1004, 1214
Hpy166II GTNNAC 5 cut(s) 146, 804, 958, 1180, 1290
Hpy188I TCNGA 6 cut(s) 103, 690, 792, 920, 975, 983
Hpy188III TCNNGA 6 cut(s) 137, 500, 545, 904, 1154, 1205
Hpy8I GTNNAC 5 cut(s) 146, 804, 958, 1180, 1290
HpyAV CCTTC 6 cut(s) 412, 594, 863, 1015, 1093, 1129
HpyCH4III ACNGT 3 cut(s) 108, 288, 1345
HpyCH4IV ACGT 2 cut(s) 794, 831
HpyCH4V TGCA 5 cut(s) 310, 344, 606, 763, 1084
HpyF10VI GCNNNNNNNGC 1 cut(s) 148
HpyF3I CTNAG 6 cut(s) 52, 138, 266, 576, 980, 1095
HpySE526I ACGT 2 cut(s) 794, 831
Hsp92I GRCGYC 1 cut(s) 794
Hsp92II CATG 4 cut(s) 74, 79, 209, 232
HspAI GCGC 3 cut(s) 313, 769, 1227
KpnI GGTACC 1 cut(s) 253
Ksp22I TGATCA 1 cut(s) 37
Kzo9I GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
LguI GCTCTTC 1 cut(s) 228
Lsp1109I GCAGC 3 cut(s) 322, 513, 1291
LweI GCATC 3 cut(s) 385, 589, 750
MaeI CTAG 3 cut(s) 1031, 1121, 1372
MaeII ACGT 2 cut(s) 794, 831
MaeIII GTNAC 3 cut(s) 588, 832, 1154
MalI GATC 7 cut(s) 39, 50, 549, 687, 914, 932, 972
MbiI CCGCTC 2 cut(s) 118, 1369
MboI GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
MboII GAAGA 6 cut(s) 245, 464, 526, 533, 1193, 1220
MfeI CAATTG 1 cut(s) 1085
MflI RGATCY 4 cut(s) 547, 912, 930, 970
MhlI GDGCHC 2 cut(s) 240, 1352
MlyI GAGTC 1 cut(s) 864
MroXI GAANNNNTTC 1 cut(s) 385
MslI CAYNNNNRTG 1 cut(s) 1169
MspA1I CMGCKG 1 cut(s) 526
MspI CCGG 3 cut(s) 111, 757, 1167
MspR9I CCNGG 2 cut(s) 848, 1168
MunI CAATTG 1 cut(s) 1085
MvaI CCWGG 1 cut(s) 848
MvnI CGCG 1 cut(s) 1227
MwoI GCNNNNNNNGC 1 cut(s) 148
NciI CCSGG 1 cut(s) 1168
NcoI CCATGG 1 cut(s) 228
NdeII GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
NlaIII CATG 4 cut(s) 74, 79, 209, 232
NlaIV GGNNCC 4 cut(s) 251, 914, 932, 1165
NmuCI GTSAC 2 cut(s) 832, 1154
PaeR7I CTCGAG 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 228
PdmI GAANNNNTTC 1 cut(s) 385
PfeI GAWTC 1 cut(s) 1219
PkrI GCNGC 5 cut(s) 312, 400, 528, 1306, 1309
PleI GAGTC 1 cut(s) 863
PpsI GAGTC 1 cut(s) 863
Psp6I CCWGG 1 cut(s) 846
PspGI CCWGG 1 cut(s) 846
PspN4I GGNNCC 4 cut(s) 251, 914, 932, 1165
PspPI GGNCC 3 cut(s) 194, 1239, 1287
PsuI RGATCY 4 cut(s) 547, 912, 930, 970
PvuII CAGCTG 1 cut(s) 526
RsaI GTAC 1 cut(s) 251
RsaNI GTAC 1 cut(s) 250
RseI CAYNNNNRTG 1 cut(s) 1169
SapI GCTCTTC 1 cut(s) 228
SatI GCNGC 5 cut(s) 311, 399, 527, 1305, 1308
Sau3AI GATC 7 cut(s) 37, 48, 547, 685, 912, 930, 970
Sau96I GGNCC 3 cut(s) 194, 1239, 1287
SchI GAGTC 1 cut(s) 864
ScrFI CCNGG 2 cut(s) 848, 1168
SduI GDGCHC 2 cut(s) 240, 1352
SfaNI GCATC 3 cut(s) 385, 589, 750
SfcI CTRYAG 3 cut(s) 127, 189, 726
Sfr274I CTCGAG 1 cut(s) 904
SinI GGWCC 1 cut(s) 1287
SlaI CTCGAG 1 cut(s) 904
SmiMI CAYNNNNRTG 1 cut(s) 1169
SmlI CTYRAG 3 cut(s) 177, 410, 904
SmoI CTYRAG 3 cut(s) 177, 410, 904
SsiI CCGC 5 cut(s) 118, 399, 1225, 1307, 1367
SspMI CTAG 3 cut(s) 1031, 1121, 1372
StyD4I CCNGG 2 cut(s) 846, 1166
StyI CCWWGG 3 cut(s) 228, 1159, 1283
TaaI ACNGT 3 cut(s) 108, 288, 1345
TaiI ACGT 2 cut(s) 797, 834
TaqI TCGA 5 cut(s) 271, 499, 627, 905, 936
TauI GCSGC 2 cut(s) 401, 1310
TfiI GAWTC 1 cut(s) 1219
TscAI CASTG 4 cut(s) 92, 396, 1241, 1350
TseFI GTSAC 2 cut(s) 832, 1154
TseI GCWGC 3 cut(s) 310, 526, 1304
Tsp45I GTSAC 2 cut(s) 832, 1154
TspDTI ATGAA 6 cut(s) 384, 419, 497, 526, 728, 1067
TspRI CASTG 4 cut(s) 92, 396, 1241, 1350
VpaK11BI GGWCC 1 cut(s) 1287
XapI RAATTY 6 cut(s) 371, 597, 696, 899, 921, 939
XhoI CTCGAG 1 cut(s) 904
XmiI GTMKAC 2 cut(s) 145, 803
XmnI GAANNNNTTC 1 cut(s) 385
XspI CTAG 3 cut(s) 1031, 1121, 1372
ZraI GACGTC 1 cut(s) 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.