RchiOBHm_Chr6g0298161

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000131
Physical Location & Seq
Forward (+)
59689378 .. 59691447
2070 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26763

Sequence Viewer

Length: 1260 bp
ATGGGAGAGCTACAGCCAAAAAATCTGAAAAATAAGTTGGAAGAGGTGTCTCCCCTTTCCCCCCAGTGTTGTATCTACAGGGTTCCAAAGAGACTACGTGATGTGAATGAGAAGGCATACACACCTCAGGTGGTCTCAATAGGCCCGCTTCACCATGGTAGAGAAGGCCTAGAAGCCATGGAAGATCACAAAATACGGTATGTGAAGGACTTTCTGGAAAGGACCAAGGTAAGCATGGAGGAATGTTTGAAAACCTTGAAAAAGTGGGAAACAAAAATCCGTGCTTGTTATGCAGTAAAAATTGAATACAATGAAACTGAGCTTGTGGAAATGGTTCTTGTAGATTCCATTTTCACCTTTGAGCTCCTGCTGAGGTTTTCTTACCCAACACTGCAAGAGGAAAAGGTTGACCGTTTATTCGGAAAACCATGGATGCTAAGGGACATAACATATGACATGTTATTGCTTGAAAATCAGATCCCATTCTTCATTCTTGAGTATCTTTATTCCTTAGCCCTTGCCAGTAATACCATTCCTCTGCAACATAATATGGTGCTTTCTATGTCTGAGCTTACCCACCGGTTCTTGCAGAATAGGGTATACATAAGGCCATTTGAAGAAATGAAGGAGAAAATCAAGCATGAAGGAACAAAACATTTTGTTGATTTTGTCCTCACATGTCATCGACCTTTAGAGCTTCCCAACAAGAAGAGACTCAAGACTTTAACCATACCAAGTGCAACAGAATTATACCAGTCCGGAGTTAAATTTGAGAATGTCAATGACAAAAACATATTTGACATAAAATTTGAGAATGGGGTCCTGAAAATTCCACACTTGAGAATCCGAGGGTCAACAGAAATTTTCTTTCGGAATCTCATTGCCTACGAGCAGTGTGAGCTCCATGATCACTACATCAACGATTATGTGTTCATCATTGACCGCCTGGTTGACAGTTCCAAGGATGTGGACTTGCTTGTTAAGAGTGGAATCCTTGAATCCAAGCTACCGGATAGTGAAGCAGCGGCAAGTTATATCAACTCCCTTGACTTGGGGCCTATTCTGTTCAGTAGAAACTTCTATTTTACTGATCTCTGTGAGGATCTGAATGCATACTATAGAGTCCCCTGGCACAAGTGGAAGGCAAGCTTGAAACAGGACTATTTTAGTACTCCATGGGCTGGACTGTCTATTGTTGTAGCGGCTATTCTCGTTGTGCTCACTTTAATTCAAACAGTGTGCTCTATAATGTCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

419

Amino Acids

49.04

Weight (kDa)

6.48

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 25 - 407 3.4e-114 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1181
AccI GTMKAC 1 cut(s) 600
AccIII TCCGGA 1 cut(s) 758
AciI CCGC 4 cut(s) 146, 943, 1025, 1202
AclWI GGATC 2 cut(s) 472, 1110
AcsI RAATTY 4 cut(s) 767, 806, 828, 861
AfaI GTAC 1 cut(s) 1171
AfiI CCNNNNNNNGG 2 cut(s) 1051, 1181
AflIII ACRYGT 2 cut(s) 456, 677
AgeI ACCGGT 1 cut(s) 579
AgsI TTSAA 8 cut(s) 250, 259, 305, 470, 617, 998, 1153, 1232
AjnI CCWGG 2 cut(s) 945, 1127
AjuI GAANNNNNNNTTGG 2 cut(s) 20, 52
AluBI AGCT 8 cut(s) 10, 322, 364, 571, 697, 901, 1006, 1149
AluI AGCT 8 cut(s) 10, 322, 364, 571, 697, 901, 1006, 1149
Alw21I GWGCWC 4 cut(s) 366, 903, 1221, 1244
Alw26I GTCTC 4 cut(s) 54, 85, 139, 706
AlwI GGATC 2 cut(s) 472, 1110
Aor13HI TCCGGA 1 cut(s) 758
AoxI GGCC 4 cut(s) 142, 166, 608, 1055
ApeKI GCWGC 1 cut(s) 1022
ApoI RAATTY 4 cut(s) 767, 806, 828, 861
ArsI GACNNNNNNTTYG 4 cut(s) 401, 433, 791, 823
AsiGI ACCGGT 1 cut(s) 579
Asp700I GAANNNNTTC 1 cut(s) 333
AspS9I GGNCC 4 cut(s) 143, 222, 820, 1055
AsuHPI GGTGA 2 cut(s) 143, 346
AvaII GGWCC 2 cut(s) 222, 820
AxyI CCTNAGG 1 cut(s) 126
BanII GRGCYC 2 cut(s) 366, 903
Bbv12I GWGCWC 4 cut(s) 366, 903, 1221, 1244
BbvCI CCTCAGC 1 cut(s) 371
BbvI GCAGC 1 cut(s) 1034
BciT130I CCWGG 2 cut(s) 947, 1129
BclI TGATCA 1 cut(s) 907
BcoDI GTCTC 4 cut(s) 54, 85, 139, 706
BfaI CTAG 1 cut(s) 170
BfmI CTRYAG 3 cut(s) 11, 76, 1117
BisI GCNGC 3 cut(s) 1023, 1026, 1203
BlsI GCNGC 3 cut(s) 1024, 1027, 1204
BmcAI AGTACT 1 cut(s) 1171
Bme1390I CCNGG 2 cut(s) 947, 1129
Bme18I GGWCC 2 cut(s) 222, 820
BmgT120I GGNCC 4 cut(s) 143, 222, 820, 1055
BmiI GGNNCC 3 cut(s) 84, 821, 1056
BmrFI CCNGG 2 cut(s) 947, 1129
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 1 cut(s) 423
BmuI ACTGGG 1 cut(s) 58
Bpu10I CCTNAGC 3 cut(s) 371, 437, 511
BpuEI CTTGAG 3 cut(s) 515, 701, 859
BsaAI YACGTR 1 cut(s) 98
BsaI GGTCTC 1 cut(s) 139
BsaJI CCNNGG 8 cut(s) 154, 177, 225, 428, 847, 960, 1127, 1175
BsaWI WCCGGW 3 cut(s) 579, 758, 1009
Bsc4I CCNNNNNNNGG 2 cut(s) 1051, 1181
Bse118I RCCGGY 1 cut(s) 579
Bse1I ACTGG 3 cut(s) 64, 522, 754
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 1 cut(s) 879
BseAI TCCGGA 1 cut(s) 758
BseBI CCWGG 2 cut(s) 947, 1129
BseDI CCNNGG 8 cut(s) 154, 177, 225, 428, 847, 960, 1127, 1175
BseGI GGATG 2 cut(s) 438, 970
BseLI CCNNNNNNNGG 2 cut(s) 1051, 1181
BseMI GCAATG 1 cut(s) 879
BseMII CTCAG 4 cut(s) 140, 309, 362, 558
BseNI ACTGG 3 cut(s) 64, 522, 754
BseXI GCAGC 1 cut(s) 1034
BshFI GGCC 4 cut(s) 144, 168, 610, 1057
BshTI ACCGGT 1 cut(s) 579
BsiHKAI GWGCWC 4 cut(s) 366, 903, 1221, 1244
BsiSI CCGG 3 cut(s) 580, 759, 1010
BslFI GGGAC 2 cut(s) 455, 1109
BslI CCNNNNNNNGG 2 cut(s) 1051, 1181
BsmAI GTCTC 4 cut(s) 54, 85, 139, 706
BsmFI GGGAC 2 cut(s) 455, 1109
BsmI GAATGC 1 cut(s) 1114
BsnI GGCC 4 cut(s) 144, 168, 610, 1057
Bso31I GGTCTC 1 cut(s) 139
Bsp1286I GDGCHC 4 cut(s) 366, 903, 1221, 1244
Bsp13I TCCGGA 1 cut(s) 758
Bsp143I GATC 5 cut(s) 184, 477, 907, 1090, 1102
Bsp19I CCATGG 4 cut(s) 154, 177, 428, 1175
BspACI CCGC 4 cut(s) 146, 943, 1025, 1202
BspANI GGCC 4 cut(s) 144, 168, 610, 1057
BspCNI CTCAG 4 cut(s) 139, 310, 363, 559
BspEI TCCGGA 1 cut(s) 758
BspLI GGNNCC 3 cut(s) 84, 821, 1056
BspPI GGATC 2 cut(s) 472, 1110
BspTNI GGTCTC 1 cut(s) 139
BsrDI GCAATG 1 cut(s) 879
BsrFI RCCGGY 1 cut(s) 579
BsrI ACTGG 3 cut(s) 64, 522, 754
BssAI RCCGGY 1 cut(s) 579
BssECI CCNNGG 8 cut(s) 154, 177, 225, 428, 847, 960, 1127, 1175
BssMI GATC 5 cut(s) 184, 477, 907, 1090, 1102
BssNAI GTATAC 1 cut(s) 601
BssT1I CCWWGG 6 cut(s) 154, 177, 225, 428, 960, 1175
Bst1107I GTATAC 1 cut(s) 601
Bst2UI CCWGG 2 cut(s) 947, 1129
Bst4CI ACNGT 5 cut(s) 198, 413, 956, 1188, 1237
Bst6I CTCTTC 2 cut(s) 36, 704
BstBAI YACGTR 1 cut(s) 98
BstC8I GCNNGC 2 cut(s) 146, 1147
BstDEI CTNAG 6 cut(s) 126, 318, 371, 437, 511, 567
BstDSI CCRYGG 4 cut(s) 154, 177, 428, 1175
BstF5I GGATG 2 cut(s) 438, 970
BstKTI GATC 5 cut(s) 187, 480, 910, 1093, 1105
BstMAI GTCTC 4 cut(s) 54, 85, 139, 706
BstMBI GATC 5 cut(s) 184, 477, 907, 1090, 1102
BstMWI GCNNNNNNNGC 2 cut(s) 290, 898
BstNI CCWGG 2 cut(s) 947, 1129
BstNSI RCATGY 2 cut(s) 460, 681
BstSCI CCNGG 2 cut(s) 945, 1127
BstSFI CTRYAG 3 cut(s) 11, 76, 1117
BstV1I GCAGC 1 cut(s) 1034
BstX2I RGATCY 2 cut(s) 477, 1102
BstXI CCANNNNNNTGG 1 cut(s) 967
BstYI RGATCY 2 cut(s) 477, 1102
BstZ17I GTATAC 1 cut(s) 601
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 4 cut(s) 144, 168, 610, 1057
BtgI CCRYGG 4 cut(s) 154, 177, 428, 1175
BtsCI GGATG 2 cut(s) 438, 970
BtsI GCAGTG 2 cut(s) 389, 899
BtsIMutI CAGTG 4 cut(s) 71, 389, 899, 1242
Cac8I GCNNGC 2 cut(s) 146, 1147
Cfr10I RCCGGY 1 cut(s) 579
Cfr13I GGNCC 4 cut(s) 143, 222, 820, 1055
Csp6I GTAC 1 cut(s) 1170
CspAI ACCGGT 1 cut(s) 579
CviAII CATG 9 cut(s) 155, 178, 235, 429, 457, 641, 678, 905, 1176
CviQI GTAC 1 cut(s) 1170
DdeI CTNAG 6 cut(s) 126, 318, 371, 437, 511, 567
DpnI GATC 5 cut(s) 186, 479, 909, 1092, 1104
DpnII GATC 5 cut(s) 184, 477, 907, 1090, 1102
Eam1104I CTCTTC 2 cut(s) 36, 704
EarI CTCTTC 2 cut(s) 36, 704
Ecl136II GAGCTC 2 cut(s) 364, 901
Eco130I CCWWGG 6 cut(s) 154, 177, 225, 428, 960, 1175
Eco147I AGGCCT 1 cut(s) 168
Eco24I GRGCYC 2 cut(s) 366, 903
Eco31I GGTCTC 1 cut(s) 139
Eco47I GGWCC 2 cut(s) 222, 820
Eco53kI GAGCTC 2 cut(s) 364, 901
Eco81I CCTNAGG 1 cut(s) 126
EcoICRI GAGCTC 2 cut(s) 364, 901
EcoO109I RGGNCCY 2 cut(s) 820, 1055
EcoRII CCWGG 2 cut(s) 945, 1127
EcoT14I CCWWGG 6 cut(s) 154, 177, 225, 428, 960, 1175
EcoT22I ATGCAT 1 cut(s) 1114
EcoT38I GRGCYC 2 cut(s) 366, 903
ErhI CCWWGG 6 cut(s) 154, 177, 225, 428, 960, 1175
FaeI CATG 9 cut(s) 158, 181, 238, 432, 460, 644, 681, 908, 1179
FalI AAGNNNNNCTT 2 cut(s) 1133, 1165
FaqI GGGAC 2 cut(s) 455, 1109
FatI CATG 9 cut(s) 154, 177, 234, 428, 456, 640, 677, 904, 1175
FauI CCCGC 1 cut(s) 153
FauNDI CATATG 1 cut(s) 451
FbaI TGATCA 1 cut(s) 907
FblI GTMKAC 1 cut(s) 600
Fnu4HI GCNGC 3 cut(s) 1023, 1026, 1203
FokI GGATG 2 cut(s) 445, 977
FriOI GRGCYC 2 cut(s) 366, 903
Fsp4HI GCNGC 3 cut(s) 1023, 1026, 1203
FspBI CTAG 1 cut(s) 170
GluI GCNGC 3 cut(s) 1023, 1026, 1203
HaeIII GGCC 4 cut(s) 144, 168, 610, 1057
HapII CCGG 3 cut(s) 580, 759, 1010
Hin1II CATG 9 cut(s) 158, 181, 238, 432, 460, 644, 681, 908, 1179
HincII GTYRAC 3 cut(s) 409, 855, 952
HindII GTYRAC 3 cut(s) 409, 855, 952
HindIII AAGCTT 1 cut(s) 1147
HinfI GANTC 7 cut(s) 344, 714, 843, 874, 990, 998, 1122
HpaII CCGG 3 cut(s) 580, 759, 1010
HphI GGTGA 2 cut(s) 143, 346
Hpy166II GTNNAC 5 cut(s) 409, 601, 855, 952, 970
Hpy188I TCNGA 7 cut(s) 27, 422, 477, 568, 848, 873, 1107
Hpy188III TCNNGA 5 cut(s) 215, 494, 718, 759, 823
Hpy8I GTNNAC 5 cut(s) 409, 601, 855, 952, 970
HpyAV CCTTC 6 cut(s) 106, 158, 199, 619, 638, 1135
HpyCH4III ACNGT 5 cut(s) 198, 413, 956, 1188, 1237
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 6 cut(s) 293, 394, 541, 589, 740, 1112
HpyF10VI GCNNNNNNNGC 2 cut(s) 290, 898
HpyF3I CTNAG 6 cut(s) 126, 318, 371, 437, 511, 567
HpySE526I ACGT 1 cut(s) 97
Hsp92II CATG 9 cut(s) 158, 181, 238, 432, 460, 644, 681, 908, 1179
Kpn2I TCCGGA 1 cut(s) 758
Ksp22I TGATCA 1 cut(s) 907
Kzo9I GATC 5 cut(s) 184, 477, 907, 1090, 1102
LmnI GCTCC 2 cut(s) 369, 906
Lsp1109I GCAGC 1 cut(s) 1034
LweI GCATC 1 cut(s) 423
MaeI CTAG 1 cut(s) 170
MaeII ACGT 1 cut(s) 97
MalI GATC 5 cut(s) 186, 479, 909, 1092, 1104
MboI GATC 5 cut(s) 184, 477, 907, 1090, 1102
MboII GAAGA 5 cut(s) 53, 194, 478, 629, 721
MflI RGATCY 2 cut(s) 477, 1102
MhlI GDGCHC 4 cut(s) 366, 903, 1221, 1244
MluCI AATT 7 cut(s) 300, 746, 767, 806, 828, 861, 1227
MlyI GAGTC 2 cut(s) 708, 1131
MmeI TCCRAC 1 cut(s) 18
MnlI CCTC 9 cut(s) 37, 135, 232, 366, 391, 546, 683, 842, 1093
Mph1103I ATGCAT 1 cut(s) 1114
MroI TCCGGA 1 cut(s) 758
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 4 cut(s) 725, 765, 981, 1226
MspA1I CMGCKG 1 cut(s) 1025
MspI CCGG 3 cut(s) 580, 759, 1010
MspR9I CCNGG 2 cut(s) 947, 1129
Mva1269I GAATGC 1 cut(s) 1114
MvaI CCWGG 2 cut(s) 947, 1129
MwoI GCNNNNNNNGC 2 cut(s) 290, 898
NcoI CCATGG 4 cut(s) 154, 177, 428, 1175
NdeI CATATG 1 cut(s) 451
NdeII GATC 5 cut(s) 184, 477, 907, 1090, 1102
NlaIII CATG 9 cut(s) 158, 181, 238, 432, 460, 644, 681, 908, 1179
NlaIV GGNNCC 3 cut(s) 84, 821, 1056
NsiI ATGCAT 1 cut(s) 1114
NspI RCATGY 2 cut(s) 460, 681
PceI AGGCCT 1 cut(s) 168
PciI ACATGT 2 cut(s) 456, 677
PctI GAATGC 1 cut(s) 1114
PdmI GAANNNNTTC 1 cut(s) 333
PfeI GAWTC 5 cut(s) 344, 843, 874, 990, 998
PflMI CCANNNNNTGG 1 cut(s) 1181
PinAI ACCGGT 1 cut(s) 579
PkrI GCNGC 3 cut(s) 1024, 1027, 1204
PleI GAGTC 2 cut(s) 708, 1130
PpsI GAGTC 2 cut(s) 708, 1130
Ppu21I YACGTR 1 cut(s) 98
PpuMI RGGWCCY 1 cut(s) 820
PscI ACATGT 2 cut(s) 456, 677
Psp124BI GAGCTC 2 cut(s) 366, 903
Psp5II RGGWCCY 1 cut(s) 820
Psp6I CCWGG 2 cut(s) 945, 1127
PspGI CCWGG 2 cut(s) 945, 1127
PspN4I GGNNCC 3 cut(s) 84, 821, 1056
PspPI GGNCC 4 cut(s) 143, 222, 820, 1055
PspPPI RGGWCCY 1 cut(s) 820
PsuI RGATCY 2 cut(s) 477, 1102
RsaI GTAC 1 cut(s) 1171
RsaNI GTAC 1 cut(s) 1170
SacI GAGCTC 2 cut(s) 366, 903
SaqAI TTAA 4 cut(s) 725, 765, 981, 1226
SatI GCNGC 3 cut(s) 1023, 1026, 1203
Sau3AI GATC 5 cut(s) 184, 477, 907, 1090, 1102
Sau96I GGNCC 4 cut(s) 143, 222, 820, 1055
ScaI AGTACT 1 cut(s) 1171
SchI GAGTC 2 cut(s) 708, 1131
ScrFI CCNGG 2 cut(s) 947, 1129
SduI GDGCHC 4 cut(s) 366, 903, 1221, 1244
SfaNI GCATC 1 cut(s) 423
SfcI CTRYAG 3 cut(s) 11, 76, 1117
SinI GGWCC 2 cut(s) 222, 820
SmlI CTYRAG 3 cut(s) 494, 716, 838
SmoI CTYRAG 3 cut(s) 494, 716, 838
Sse9I AATT 7 cut(s) 300, 746, 767, 806, 828, 861, 1227
SseBI AGGCCT 1 cut(s) 168
SsiI CCGC 4 cut(s) 146, 943, 1025, 1202
SspMI CTAG 1 cut(s) 170
SstI GAGCTC 2 cut(s) 366, 903
StuI AGGCCT 1 cut(s) 168
StyD4I CCNGG 2 cut(s) 945, 1127
StyI CCWWGG 6 cut(s) 154, 177, 225, 428, 960, 1175
TaaI ACNGT 5 cut(s) 198, 413, 956, 1188, 1237
TaiI ACGT 1 cut(s) 100
TaqI TCGA 1 cut(s) 685
TasI AATT 7 cut(s) 300, 746, 767, 806, 828, 861, 1227
TatI WGTACW 1 cut(s) 1169
TauI GCSGC 2 cut(s) 1028, 1205
TfiI GAWTC 5 cut(s) 344, 843, 874, 990, 998
Tru1I TTAA 4 cut(s) 725, 765, 981, 1226
Tru9I TTAA 4 cut(s) 725, 765, 981, 1226
TscAI CASTG 4 cut(s) 71, 396, 899, 1242
TseI GCWGC 1 cut(s) 1022
TspDTI ATGAA 5 cut(s) 327, 478, 638, 657, 922
TspGWI ACGGA 1 cut(s) 269
TspRI CASTG 4 cut(s) 71, 396, 899, 1242
Van91I CCANNNNNTGG 1 cut(s) 1181
VpaK11BI GGWCC 2 cut(s) 222, 820
XapI RAATTY 4 cut(s) 767, 806, 828, 861
XceI RCATGY 2 cut(s) 460, 681
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XmiI GTMKAC 1 cut(s) 600
XmnI GAANNNNTTC 1 cut(s) 333
XspI CTAG 1 cut(s) 170
ZrmI AGTACT 1 cut(s) 1171
Zsp2I ATGCAT 1 cut(s) 1114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.