Rroxscaffold_3G00234430

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000131
Physical Location & Seq
Reverse (-)
20811289 .. 20814451
3163 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00234430.1

Sequence Viewer

Length: 1338 bp
ATGATGGAAGGAAGTACTCCATTGGGTGCTCCAAATGACATAGAAAACCGGTACACGTCAGCATTAGAAACTTCGATGATGGAGAAGTTAGATAACTTGTTTCCTATGTCTCCTTCGCGTTGCATCTACAGGGTTCCTCATCGACTACGATCTGTATGTGAAGAGGCCTACACACCTCGGGTAGTCTCTATCGGCCCACTTCATCATGGAAAAGAGACCTTGAAAGCCATGGAAGAACAGAAATGGAGGTACCTACAATGCTTTATACGTCGCAACAATTTAAGCCTCAAGGATTGTATAAAAATGGTCAGGGACCGAGAAACAAGATTGCGAAGTTGTTACTCAGAGGCCATTGAGCTTCAAAGTGATGAATTGATATGTATCATTCTAGTGGATGCTGTCTTCCTCATTGAGTTCTTACTTAGGTACTCGAAACGTGATTGGCGATTTGAAAATGACTACATATTTGGAACTCCAAAGATGATCGATGATGTATGGCCTGACTTGGTGATGCTTGAAAATCAGCTGCCCTTCTTCATTCTTGAGCACCTATTCGGTTTAGAAATACTTTCAGCCCCTTTTGAGGACACCGAAACACATGAGGATTTTGGGAGGCCTTCAATATTGCATCTTTGCCACCATTTTTTGAATCAAAGAGTATCACGTATCGGGGGAATGTTAGATAATTTGAAGGCCGTATCCGAAGAAGAAGTGCAACATTTTGTTGATTTCTTAAGAAAGCTTTATATAGCACCTATATTTAAACCACAATCTGCAGGACAACCCAAACAAGTAACAGCACCTAGCATCGAAGAGCTACACCGGGCAGGAGTCAAGTTTAAAGTCGGATCCACCAAAAACTTGTTTGACATAAGATTCAAAGATGGGATTCTGGAAATTCCAAAATTAGTGATATGGGATCGAACGGAGCTTGTTCTTAGAAATTTAATTGCCTTTGAACAATGCCTTTGGAAAAATAATTACATTAGTGATTATGTTTACATCATGGATCAGTTTGTGAACACCGCAAAAGATGTGGAGTTGCTTGTTCATTACGGAATTGCTGAACATATGCTAGGAGGTGGCAACGATGAATTGTCTACCATGATTAACAGCCTTACAAGTGGGGTTAATATTTACCCAAAGATGTTCTATTATGGTACTGTTTGTGAAGATTTGAACAAGTTTCGCAGTATGCTGTGGCACAGAAGGATGGCAAATTTGAGACAAAATTATTTCAACACACCTTGGAAAACTATTTCTTTCATTGCAGCAGTTTTTCTACTCATATTCACTGCTGTTCAAACGGTCTGCTCAATTATTTCTCTGAAGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

445

Amino Acids

51.89

Weight (kDa)

6.25

Isoelectric Point (pI)

46.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 42 - 431 9.3e-115 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 249
AccB1I GGYRCC 1 cut(s) 249
AccI GTMKAC 1 cut(s) 1100
AccII CGCG 1 cut(s) 118
AciI CCGC 1 cut(s) 1026
AclWI GGATC 4 cut(s) 843, 856, 927, 1017
AcsI RAATTY 3 cut(s) 897, 943, 1219
AfaI GTAC 5 cut(s) 16, 53, 251, 428, 1162
AfiI CCNNNNNNNGG 1 cut(s) 583
AflII CTTAAG 1 cut(s) 733
AflIII ACRYGT 1 cut(s) 54
AgeI ACCGGT 1 cut(s) 48
AjiI CACGTC 1 cut(s) 57
AluBI AGCT 5 cut(s) 358, 526, 742, 817, 931
AluI AGCT 5 cut(s) 358, 526, 742, 817, 931
Alw21I GWGCWC 2 cut(s) 31, 549
Alw26I GTCTC 4 cut(s) 114, 190, 209, 1219
AlwI GGATC 4 cut(s) 843, 856, 927, 1017
Ama87I CYCGRG 1 cut(s) 177
AoxI GGCC 6 cut(s) 165, 193, 348, 497, 614, 693
ApeKI GCWGC 2 cut(s) 526, 1271
ApoI RAATTY 3 cut(s) 897, 943, 1219
ArsI GACNNNNNNTTYG 2 cut(s) 449, 481
AsiGI ACCGGT 1 cut(s) 48
Asp718I GGTACC 1 cut(s) 249
AspS9I GGNCC 2 cut(s) 194, 313
AsuC2I CCSGG 1 cut(s) 824
AsuHPI GGTGA 1 cut(s) 520
AvaI CYCGRG 1 cut(s) 177
AvaII GGWCC 1 cut(s) 313
BamHI GGATCC 1 cut(s) 848
BanI GGYRCC 1 cut(s) 249
BbsI GAAGAC 1 cut(s) 394
Bbv12I GWGCWC 2 cut(s) 31, 549
BbvI GCAGC 2 cut(s) 513, 1283
BccI CCATC 3 cut(s) 73, 878, 1207
BceAI ACGGC 1 cut(s) 680
BciVI GTATCC 1 cut(s) 709
BcnI CCSGG 1 cut(s) 824
BcoDI GTCTC 4 cut(s) 114, 190, 209, 1219
BfaI CTAG 3 cut(s) 389, 804, 1076
BfmI CTRYAG 2 cut(s) 127, 774
BfrI CTTAAG 1 cut(s) 733
BfuI GTATCC 1 cut(s) 709
BisI GCNGC 2 cut(s) 527, 1272
BlsI GCNGC 2 cut(s) 528, 1273
BmcAI AGTACT 1 cut(s) 16
Bme1390I CCNGG 1 cut(s) 824
Bme18I GGWCC 1 cut(s) 313
BmeT110I CYCGRG 1 cut(s) 177
BmgBI CACGTC 1 cut(s) 57
BmgT120I GGNCC 2 cut(s) 194, 313
BmiI GGNNCC 4 cut(s) 135, 251, 314, 850
BmrFI CCNGG 1 cut(s) 824
BmsI GCATC 5 cut(s) 132, 385, 501, 637, 816
BpiI GAAGAC 1 cut(s) 394
BpuEI CTTGAG 2 cut(s) 272, 563
BpuMI CCSGG 1 cut(s) 824
Bsa29I ATCGAT 1 cut(s) 486
BsaAI YACGTR 1 cut(s) 665
BsaBI GATNNNNATC 1 cut(s) 380
BsaI GGTCTC 1 cut(s) 209
BsaJI CCNNGG 3 cut(s) 176, 228, 1247
BsaWI WCCGGW 1 cut(s) 48
Bsc4I CCNNNNNNNGG 1 cut(s) 583
Bse118I RCCGGY 1 cut(s) 48
Bse3DI GCAATG 1 cut(s) 1266
Bse8I GATNNNNATC 1 cut(s) 380
BseCI ATCGAT 1 cut(s) 486
BseDI CCNNGG 3 cut(s) 176, 228, 1247
BseGI GGATG 2 cut(s) 400, 1218
BseJI GATNNNNATC 1 cut(s) 380
BseLI CCNNNNNNNGG 1 cut(s) 583
BseMI GCAATG 1 cut(s) 1266
BseMII CTCAG 1 cut(s) 357
BseXI GCAGC 2 cut(s) 513, 1283
Bsh1236I CGCG 1 cut(s) 118
BshFI GGCC 6 cut(s) 167, 195, 350, 499, 616, 695
BshNI GGYRCC 1 cut(s) 249
BshTI ACCGGT 1 cut(s) 48
BshVI ATCGAT 1 cut(s) 486
BsiHKAI GWGCWC 2 cut(s) 31, 549
BsiHKCI CYCGRG 1 cut(s) 177
BsiSI CCGG 2 cut(s) 49, 823
BslFI GGGAC 1 cut(s) 326
BslI CCNNNNNNNGG 1 cut(s) 583
BsmAI GTCTC 4 cut(s) 114, 190, 209, 1219
BsmFI GGGAC 1 cut(s) 326
BsnI GGCC 6 cut(s) 167, 195, 350, 499, 616, 695
Bso31I GGTCTC 1 cut(s) 209
BsoBI CYCGRG 1 cut(s) 177
Bsp1286I GDGCHC 2 cut(s) 31, 549
Bsp143I GATC 5 cut(s) 149, 483, 848, 919, 1009
Bsp19I CCATGG 1 cut(s) 228
BspACI CCGC 1 cut(s) 1026
BspANI GGCC 6 cut(s) 167, 195, 350, 499, 616, 695
BspCNI CTCAG 1 cut(s) 356
BspDI ATCGAT 1 cut(s) 486
BspFNI CGCG 1 cut(s) 118
BspLI GGNNCC 4 cut(s) 135, 251, 314, 850
BspMAI CTGCAG 1 cut(s) 778
BspPI GGATC 4 cut(s) 843, 856, 927, 1017
BspQI GCTCTTC 1 cut(s) 807
BspT107I GGYRCC 1 cut(s) 249
BspTI CTTAAG 1 cut(s) 733
BspTNI GGTCTC 1 cut(s) 209
BsrDI GCAATG 1 cut(s) 1266
BsrFI RCCGGY 1 cut(s) 48
BssAI RCCGGY 1 cut(s) 48
BssECI CCNNGG 3 cut(s) 176, 228, 1247
BssMI GATC 5 cut(s) 149, 483, 848, 919, 1009
BssT1I CCWWGG 2 cut(s) 228, 1247
Bst4CI ACNGT 2 cut(s) 1165, 1309
Bst6I CTCTTC 2 cut(s) 156, 807
BstAFI CTTAAG 1 cut(s) 733
BstBAI YACGTR 1 cut(s) 665
BstDEI CTNAG 3 cut(s) 343, 422, 938
BstDSI CCRYGG 1 cut(s) 228
BstF5I GGATG 2 cut(s) 400, 1218
BstFNI CGCG 1 cut(s) 118
BstKTI GATC 5 cut(s) 152, 486, 851, 922, 1012
BstMAI GTCTC 4 cut(s) 114, 190, 209, 1219
BstMBI GATC 5 cut(s) 149, 483, 848, 919, 1009
BstSCI CCNGG 1 cut(s) 822
BstSFI CTRYAG 2 cut(s) 127, 774
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 2 cut(s) 513, 1283
BstV2I GAAGAC 1 cut(s) 394
BstX2I RGATCY 1 cut(s) 848
BstYI RGATCY 1 cut(s) 848
Bsu15I ATCGAT 1 cut(s) 486
BsuI GTATCC 1 cut(s) 709
BsuRI GGCC 6 cut(s) 167, 195, 350, 499, 616, 695
BsuTUI ATCGAT 1 cut(s) 486
BtgI CCRYGG 1 cut(s) 228
BtrI CACGTC 1 cut(s) 57
BtsCI GGATG 2 cut(s) 400, 1218
BtsI GCAGTG 1 cut(s) 1293
BtsIMutI CAGTG 1 cut(s) 1293
Cfr10I RCCGGY 1 cut(s) 48
Cfr13I GGNCC 2 cut(s) 194, 313
ClaI ATCGAT 1 cut(s) 486
Csp6I GTAC 5 cut(s) 15, 52, 250, 427, 1161
CspAI ACCGGT 1 cut(s) 48
CspCI CAANNNNNGTGG 2 cut(s) 1017, 1052
CviAII CATG 5 cut(s) 206, 229, 599, 1006, 1105
CviQI GTAC 5 cut(s) 15, 52, 250, 427, 1161
DdeI CTNAG 3 cut(s) 343, 422, 938
DpnI GATC 5 cut(s) 151, 485, 850, 921, 1011
DpnII GATC 5 cut(s) 149, 483, 848, 919, 1009
DraI TTTAAA 2 cut(s) 763, 841
Eam1104I CTCTTC 2 cut(s) 156, 807
EarI CTCTTC 2 cut(s) 156, 807
Eco130I CCWWGG 2 cut(s) 228, 1247
Eco147I AGGCCT 2 cut(s) 167, 616
Eco31I GGTCTC 1 cut(s) 209
Eco47I GGWCC 1 cut(s) 313
Eco88I CYCGRG 1 cut(s) 177
EcoT14I CCWWGG 2 cut(s) 228, 1247
ErhI CCWWGG 2 cut(s) 228, 1247
FaeI CATG 5 cut(s) 209, 232, 602, 1009, 1108
FaqI GGGAC 1 cut(s) 326
FatI CATG 5 cut(s) 205, 228, 598, 1005, 1104
FauNDI CATATG 1 cut(s) 1071
FblI GTMKAC 1 cut(s) 1100
Fnu4HI GCNGC 2 cut(s) 527, 1272
FokI GGATG 2 cut(s) 407, 1225
Fsp4HI GCNGC 2 cut(s) 527, 1272
FspBI CTAG 3 cut(s) 389, 804, 1076
GluI GCNGC 2 cut(s) 527, 1272
HaeIII GGCC 6 cut(s) 167, 195, 350, 499, 616, 695
HapII CCGG 2 cut(s) 49, 823
Hin1II CATG 5 cut(s) 209, 232, 602, 1009, 1108
HindIII AAGCTT 1 cut(s) 740
HinfI GANTC 4 cut(s) 649, 831, 876, 889
HpaII CCGG 2 cut(s) 49, 823
HphI GGTGA 1 cut(s) 520
Hpy166II GTNNAC 4 cut(s) 54, 1000, 1021, 1101
Hpy188I TCNGA 4 cut(s) 346, 703, 848, 1329
Hpy188III TCNNGA 2 cut(s) 542, 893
Hpy8I GTNNAC 4 cut(s) 54, 1000, 1021, 1101
Hpy99I CGWCG 1 cut(s) 273
HpyAV CCTTC 5 cut(s) 123, 541, 627, 685, 1203
HpyCH4III ACNGT 2 cut(s) 1165, 1309
HpyCH4IV ACGT 4 cut(s) 56, 268, 436, 664
HpyCH4V TGCA 5 cut(s) 123, 628, 715, 776, 1271
HpyF3I CTNAG 3 cut(s) 343, 422, 938
HpySE526I ACGT 4 cut(s) 56, 268, 436, 664
Hsp92II CATG 5 cut(s) 209, 232, 602, 1009, 1108
KpnI GGTACC 1 cut(s) 253
Kzo9I GATC 5 cut(s) 149, 483, 848, 919, 1009
LguI GCTCTTC 1 cut(s) 807
LmnI GCTCC 2 cut(s) 34, 928
LpnPI CCDG 8 cut(s) 62, 115, 295, 513, 762, 813, 836, 878
Lsp1109I GCAGC 2 cut(s) 513, 1283
LweI GCATC 5 cut(s) 132, 385, 501, 637, 816
MaeI CTAG 3 cut(s) 389, 804, 1076
MaeII ACGT 4 cut(s) 56, 268, 436, 664
MaeIII GTNAC 2 cut(s) 338, 793
MalI GATC 5 cut(s) 151, 485, 850, 921, 1011
MboI GATC 5 cut(s) 149, 483, 848, 919, 1009
MboII GAAGA 8 cut(s) 173, 245, 394, 526, 716, 719, 824, 1184
MflI RGATCY 1 cut(s) 848
MhlI GDGCHC 2 cut(s) 31, 549
MlyI GAGTC 1 cut(s) 840
MmeI TCCRAC 1 cut(s) 826
MseI TTAA 8 cut(s) 281, 734, 762, 840, 947, 1110, 1131, 1336
MslI CAYNNNNRTG 1 cut(s) 389
MspA1I CMGCKG 1 cut(s) 526
MspCI CTTAAG 1 cut(s) 733
MspI CCGG 2 cut(s) 49, 823
MspR9I CCNGG 1 cut(s) 824
MvnI CGCG 1 cut(s) 118
NciI CCSGG 1 cut(s) 824
NcoI CCATGG 1 cut(s) 228
NdeI CATATG 1 cut(s) 1071
NdeII GATC 5 cut(s) 149, 483, 848, 919, 1009
NlaIII CATG 5 cut(s) 209, 232, 602, 1009, 1108
NlaIV GGNNCC 4 cut(s) 135, 251, 314, 850
PceI AGGCCT 2 cut(s) 167, 616
PciSI GCTCTTC 1 cut(s) 807
PcsI WCGNNNNNNNCGW 1 cut(s) 442
PfeI GAWTC 3 cut(s) 649, 876, 889
PinAI ACCGGT 1 cut(s) 48
PkrI GCNGC 2 cut(s) 528, 1273
PleI GAGTC 1 cut(s) 839
PpsI GAGTC 1 cut(s) 839
Ppu21I YACGTR 1 cut(s) 665
PspN4I GGNNCC 4 cut(s) 135, 251, 314, 850
PspPI GGNCC 2 cut(s) 194, 313
PstI CTGCAG 1 cut(s) 778
PsuI RGATCY 1 cut(s) 848
PvuII CAGCTG 1 cut(s) 526
RsaI GTAC 5 cut(s) 16, 53, 251, 428, 1162
RsaNI GTAC 5 cut(s) 15, 52, 250, 427, 1161
RseI CAYNNNNRTG 1 cut(s) 389
SapI GCTCTTC 1 cut(s) 807
SaqAI TTAA 8 cut(s) 281, 734, 762, 840, 947, 1110, 1131, 1336
SatI GCNGC 2 cut(s) 527, 1272
Sau3AI GATC 5 cut(s) 149, 483, 848, 919, 1009
Sau96I GGNCC 2 cut(s) 194, 313
ScaI AGTACT 1 cut(s) 16
SchI GAGTC 1 cut(s) 840
ScrFI CCNGG 1 cut(s) 824
SduI GDGCHC 2 cut(s) 31, 549
SfaNI GCATC 5 cut(s) 132, 385, 501, 637, 816
SfcI CTRYAG 2 cut(s) 127, 774
SinI GGWCC 1 cut(s) 313
SmiMI CAYNNNNRTG 1 cut(s) 389
SmlI CTYRAG 3 cut(s) 287, 542, 733
SmoI CTYRAG 3 cut(s) 287, 542, 733
SseBI AGGCCT 2 cut(s) 167, 616
SsiI CCGC 1 cut(s) 1026
SspI AATATT 2 cut(s) 624, 1135
SspMI CTAG 3 cut(s) 389, 804, 1076
StuI AGGCCT 2 cut(s) 167, 616
StyD4I CCNGG 1 cut(s) 822
StyI CCWWGG 2 cut(s) 228, 1247
TaaI ACNGT 2 cut(s) 1165, 1309
TaiI ACGT 4 cut(s) 59, 271, 439, 667
TaqI TCGA 6 cut(s) 74, 142, 431, 486, 810, 922
TaqII GACCGA 1 cut(s) 330
TatI WGTACW 1 cut(s) 14
TfiI GAWTC 3 cut(s) 649, 876, 889
Tru1I TTAA 8 cut(s) 281, 734, 762, 840, 947, 1110, 1131, 1336
Tru9I TTAA 8 cut(s) 281, 734, 762, 840, 947, 1110, 1131, 1336
TscAI CASTG 1 cut(s) 1300
TseI GCWGC 2 cut(s) 526, 1271
TspDTI ATGAA 6 cut(s) 191, 384, 526, 1040, 1107, 1255
TspGWI ACGGA 2 cut(s) 941, 1071
TspRI CASTG 1 cut(s) 1300
Vha464I CTTAAG 1 cut(s) 733
VpaK11BI GGWCC 1 cut(s) 313
XapI RAATTY 3 cut(s) 897, 943, 1219
XmiI GTMKAC 1 cut(s) 1100
XspI CTAG 3 cut(s) 389, 804, 1076
ZrmI AGTACT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.