MD08G1146600.v1.1

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000131
Physical Location & Seq
Reverse (-)
14686595 .. 14687965
1371 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1146600.v1.1.491

Sequence Viewer

Length: 1371 bp
ATGGAACTAAGCAATCATGATCCACTAGTAACTTCGATGAGTGAGGAGTTGGATAGATTGCCTCCACTGTCTCCTTCGTGTTGTATCTACAGAGTTCCTAAGCGACTACGACGTGTAAGTGAAAAGGCCTACACACCTCAAGTAGTCTCTATAGGCCCCCTTCACCATGGCAAGGAAACCTTAAAAGCCATGGAAGAGCTCAAATATAGATACCTAAAAGATTTTTTAGATCGTACCGATGTTAAGTTGGAGTACTGCATAAGAAGAATAAGGGACAAAGAAGCAGTGCTGCGCAGTTGCTATGCAGAGACCATTAAGTTTACCAGTGATGAATTTGTAAGAATCATTCTAGTGGATGCGGCCTTCATCATTGAGATCTTAATGAGGTTTCGTTACAAGAAATTGCGAGTTCCGACTGACCGGATATTCAACAAACCAAGGATGTTAGAGGATGTATGGCCTGACATGCGGATGCTTGAAAATCAACTGCCGTTTTTCATTCTTGTGGATCTTTTTGATCAGGAGAGAAATAGAGTCGACACTGAGACGACTTCCATAATTGATCTTTCGCACCATTTCTTCAAAAATCTAATGTATCTAAAAGATACGGAAGATGCTTTGCCCCAAATACGTCCTCCTCATGAGGTAGAACATTTCGTTGATTTTGTTAGAAAGTTATATCCATTGCCACCACCATCAGTATTGGAAGTACCACAAGCTCGAGGGCAATCTAAAACTCTAGCCATATCTAGCATGAGGTCATCATCATTTGTAGTGGATGTACAACAAGCTCAAGGGCCACTCGAAACTCTACTCACACTCACACCCAGCATGACACAATTGTACCGCGCTGGAGTCAAGTTTAAGGTGGGATCTAGTAGAAATATATTTGACATAAGATTTGAAGATGGGGTATTGGAATTTCCAAAAATTACAATAAGTGATCAATCAGAAGTTACACTCACAAATCTCCTTGTCTATGAACAAAGCCTATGCCAGAAAGTTGAGAATTACATAAACGATTATGTTGTCATCTTGAACGTTCTTATGAAAACCCCAGAAGACGTGGAATTGCTTGTTAAGAATGGAATTGTTGAAAATAAGCTAGGTGACAGCAGTAAGGGGTGTACGATGATTAAGAACCTAGCGGATGGGGTCGTTATGGACTCGGAGGAGTTCTACTTTGCCACTCTTTGTGACGACCTGACCAAGTACTACAAAATGTTCAGGCACAGAGGGATGGAATATTTGATAAAACATTTTTTCAACTCACCTTGGACAACTAAAGAAATCATTGCAGCTGTTATTCTTCTAGTGCTCACTCTCATACAGACGGTCTGCTCTGTTATCTCTGCTAGGCAAAAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

457

Amino Acids

52.99

Weight (kDa)

6.54

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 29 - 440 8.1e-107 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 293
AccI GTMKAC 1 cut(s) 537
AccII CGCG 1 cut(s) 849
AciI CCGC 4 cut(s) 359, 469, 847, 1148
AclI AACGTT 1 cut(s) 1041
AclWI GGATC 3 cut(s) 14, 516, 880
AcsI RAATTY 2 cut(s) 332, 920
AfaI GTAC 7 cut(s) 235, 254, 711, 783, 845, 1129, 1214
AfiI CCNNNNNNNGG 1 cut(s) 172
AflIII ACRYGT 1 cut(s) 112
AgsI TTSAA 7 cut(s) 430, 479, 583, 905, 1039, 1097, 1267
AhlI ACTAGT 1 cut(s) 25
AjiI CACGTC 2 cut(s) 113, 1066
AluBI AGCT 5 cut(s) 199, 719, 791, 1105, 1301
AluI AGCT 5 cut(s) 199, 719, 791, 1105, 1301
Alw21I GWGCWC 2 cut(s) 201, 1320
Alw26I GTCTC 4 cut(s) 75, 151, 302, 539
AlwI GGATC 3 cut(s) 14, 516, 880
Ama87I CYCGRG 1 cut(s) 720
AoxI GGCC 5 cut(s) 126, 154, 360, 458, 797
ApeKI GCWGC 2 cut(s) 289, 1298
ApoI RAATTY 2 cut(s) 332, 920
ArsI GACNNNNNNTTYG 2 cut(s) 884, 916
AspLEI GCGC 2 cut(s) 294, 851
AspS9I GGNCC 2 cut(s) 155, 797
AsuHPI GGTGA 3 cut(s) 155, 1121, 1263
AvaI CYCGRG 1 cut(s) 720
BaeI ACNNNNGTAYC 2 cut(s) 827, 860
BanII GRGCYC 1 cut(s) 201
BbsI GAAGAC 1 cut(s) 1068
Bbv12I GWGCWC 2 cut(s) 201, 1320
BbvI GCAGC 2 cut(s) 276, 1310
BccI CCATC 4 cut(s) 703, 902, 1145, 1234
BceAI ACGGC 1 cut(s) 475
BclI TGATCA 2 cut(s) 517, 943
BcoDI GTCTC 4 cut(s) 75, 151, 302, 539
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 9 cut(s) 26, 350, 740, 750, 876, 1106, 1145, 1313, 1356
BfmI CTRYAG 2 cut(s) 88, 150
BglII AGATCT 1 cut(s) 375
BisI GCNGC 3 cut(s) 290, 360, 1299
BlsI GCNGC 3 cut(s) 291, 361, 1300
BmcAI AGTACT 2 cut(s) 254, 1214
BmeT110I CYCGRG 1 cut(s) 720
BmgBI CACGTC 2 cut(s) 113, 1066
BmgT120I GGNCC 2 cut(s) 155, 797
BmiI GGNNCC 1 cut(s) 157
BmsI GCATC 3 cut(s) 346, 462, 604
BpiI GAAGAC 1 cut(s) 1068
BpmI CTGGAG 1 cut(s) 873
Bpu10I CCTNAGC 1 cut(s) 99
BpuEI CTTGAG 2 cut(s) 123, 777
BsaI GGTCTC 1 cut(s) 302
BsaJI CCNNGG 4 cut(s) 166, 189, 437, 1274
BsaWI WCCGGW 1 cut(s) 420
Bsc4I CCNNNNNNNGG 1 cut(s) 172
Bse1I ACTGG 1 cut(s) 324
Bse3DI GCAATG 2 cut(s) 683, 1293
BseDI CCNNGG 4 cut(s) 166, 189, 437, 1274
BseGI GGATG 7 cut(s) 361, 447, 457, 477, 784, 1156, 1245
BseLI CCNNNNNNNGG 1 cut(s) 172
BseMI GCAATG 2 cut(s) 683, 1293
BseMII CTCAG 1 cut(s) 534
BseNI ACTGG 1 cut(s) 324
BseRI GAGGAG 3 cut(s) 59, 627, 1187
BseXI GCAGC 2 cut(s) 276, 1310
BseYI CCCAGC 1 cut(s) 827
Bsh1236I CGCG 1 cut(s) 849
BshFI GGCC 5 cut(s) 128, 156, 362, 460, 799
BsiHKAI GWGCWC 2 cut(s) 201, 1320
BsiHKCI CYCGRG 1 cut(s) 720
BsiSI CCGG 1 cut(s) 421
BslFI GGGAC 1 cut(s) 287
BslI CCNNNNNNNGG 1 cut(s) 172
BsmAI GTCTC 4 cut(s) 75, 151, 302, 539
BsmBI CGTCTC 1 cut(s) 539
BsmFI GGGAC 1 cut(s) 287
BsnI GGCC 5 cut(s) 128, 156, 362, 460, 799
Bso31I GGTCTC 1 cut(s) 302
BsoBI CYCGRG 1 cut(s) 720
Bsp1286I GDGCHC 2 cut(s) 201, 1320
Bsp1407I TGTACA 1 cut(s) 781
Bsp143I GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
Bsp19I CCATGG 2 cut(s) 166, 189
BspACI CCGC 4 cut(s) 359, 469, 847, 1148
BspANI GGCC 5 cut(s) 128, 156, 362, 460, 799
BspCNI CTCAG 1 cut(s) 535
BspFNI CGCG 1 cut(s) 849
BspHI TCATGA 2 cut(s) 16, 640
BspLI GGNNCC 1 cut(s) 157
BspPI GGATC 3 cut(s) 14, 516, 880
BspQI GCTCTTC 1 cut(s) 189
BspTNI GGTCTC 1 cut(s) 302
BsrDI GCAATG 2 cut(s) 683, 1293
BsrGI TGTACA 1 cut(s) 781
BsrI ACTGG 1 cut(s) 324
BssECI CCNNGG 4 cut(s) 166, 189, 437, 1274
BssMI GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
BssT1I CCWWGG 4 cut(s) 166, 189, 437, 1274
Bst4CI ACNGT 3 cut(s) 69, 1336, 1368
Bst6I CTCTTC 1 cut(s) 189
BstAUI TGTACA 1 cut(s) 781
BstDEI CTNAG 3 cut(s) 8, 99, 543
BstDSI CCRYGG 2 cut(s) 166, 189
BstF5I GGATG 7 cut(s) 361, 447, 457, 477, 784, 1156, 1245
BstFNI CGCG 1 cut(s) 849
BstHHI GCGC 2 cut(s) 294, 851
BstKTI GATC 8 cut(s) 22, 232, 378, 511, 520, 565, 875, 946
BstMAI GTCTC 4 cut(s) 75, 151, 302, 539
BstMBI GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
BstMWI GCNNNNNNNGC 1 cut(s) 466
BstNSI RCATGY 1 cut(s) 469
BstSFI CTRYAG 2 cut(s) 88, 150
BstUI CGCG 1 cut(s) 849
BstV1I GCAGC 2 cut(s) 276, 1310
BstV2I GAAGAC 1 cut(s) 1068
BstX2I RGATCY 3 cut(s) 375, 508, 872
BstYI RGATCY 3 cut(s) 375, 508, 872
BsuRI GGCC 5 cut(s) 128, 156, 362, 460, 799
BtgI CCRYGG 2 cut(s) 166, 189
BtrI CACGTC 2 cut(s) 113, 1066
BtsCI GGATG 7 cut(s) 361, 447, 457, 477, 784, 1156, 1245
BtsI GCAGTG 1 cut(s) 291
BtsIMutI CAGTG 4 cut(s) 65, 291, 331, 540
CciI TCATGA 2 cut(s) 16, 640
CfoI GCGC 2 cut(s) 294, 851
Cfr13I GGNCC 2 cut(s) 155, 797
Csp6I GTAC 7 cut(s) 234, 253, 710, 782, 844, 1128, 1213
CviAII CATG 7 cut(s) 17, 167, 190, 466, 641, 754, 832
CviQI GTAC 7 cut(s) 234, 253, 710, 782, 844, 1128, 1213
DdeI CTNAG 3 cut(s) 8, 99, 543
DpnI GATC 8 cut(s) 21, 231, 377, 510, 519, 564, 874, 945
DpnII GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 4 cut(s) 166, 189, 437, 1274
Eco147I AGGCCT 1 cut(s) 128
Eco24I GRGCYC 1 cut(s) 201
Eco31I GGTCTC 1 cut(s) 302
Eco53kI GAGCTC 1 cut(s) 199
Eco88I CYCGRG 1 cut(s) 720
EcoICRI GAGCTC 1 cut(s) 199
EcoO109I RGGNCCY 1 cut(s) 155
EcoT14I CCWWGG 4 cut(s) 166, 189, 437, 1274
EcoT38I GRGCYC 1 cut(s) 201
ErhI CCWWGG 4 cut(s) 166, 189, 437, 1274
Esp3I CGTCTC 1 cut(s) 539
FaeI CATG 7 cut(s) 20, 170, 193, 469, 644, 757, 835
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FaqI GGGAC 1 cut(s) 287
FatI CATG 7 cut(s) 16, 166, 189, 465, 640, 753, 831
FbaI TGATCA 2 cut(s) 517, 943
FblI GTMKAC 1 cut(s) 537
Fnu4HI GCNGC 3 cut(s) 290, 360, 1299
FokI GGATG 7 cut(s) 368, 454, 464, 484, 791, 1163, 1252
FriOI GRGCYC 1 cut(s) 201
Fsp4HI GCNGC 3 cut(s) 290, 360, 1299
FspBI CTAG 9 cut(s) 26, 350, 740, 750, 876, 1106, 1145, 1313, 1356
FspI TGCGCA 1 cut(s) 293
GlaI GCGC 2 cut(s) 293, 850
GluI GCNGC 3 cut(s) 290, 360, 1299
GsaI CCCAGC 1 cut(s) 831
GsuI CTGGAG 1 cut(s) 873
HaeIII GGCC 5 cut(s) 128, 156, 362, 460, 799
HapII CCGG 1 cut(s) 421
HhaI GCGC 2 cut(s) 294, 851
Hin1II CATG 7 cut(s) 20, 170, 193, 469, 644, 757, 835
Hin6I GCGC 2 cut(s) 292, 849
HinP1I GCGC 2 cut(s) 292, 849
HincII GTYRAC 1 cut(s) 538
HindII GTYRAC 1 cut(s) 538
HinfI GANTC 4 cut(s) 342, 534, 855, 1166
HpaII CCGG 1 cut(s) 421
HphI GGTGA 3 cut(s) 155, 1121, 1263
Hpy166II GTNNAC 3 cut(s) 321, 538, 1128
Hpy188I TCNGA 3 cut(s) 414, 952, 1171
Hpy188III TCNNGA 4 cut(s) 17, 521, 641, 1036
Hpy8I GTNNAC 3 cut(s) 321, 538, 1128
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 3 cut(s) 84, 170, 373
HpyCH4III ACNGT 3 cut(s) 69, 1336, 1368
HpyCH4IV ACGT 4 cut(s) 112, 631, 1041, 1065
HpyCH4V TGCA 3 cut(s) 258, 305, 1298
HpyF10VI GCNNNNNNNGC 1 cut(s) 466
HpyF3I CTNAG 3 cut(s) 8, 99, 543
HpySE526I ACGT 4 cut(s) 112, 631, 1041, 1065
Hsp92II CATG 7 cut(s) 20, 170, 193, 469, 644, 757, 835
HspAI GCGC 2 cut(s) 292, 849
Ksp22I TGATCA 2 cut(s) 517, 943
Kzo9I GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
LguI GCTCTTC 1 cut(s) 189
Lsp1109I GCAGC 2 cut(s) 276, 1310
LweI GCATC 3 cut(s) 346, 462, 604
MaeI CTAG 9 cut(s) 26, 350, 740, 750, 876, 1106, 1145, 1313, 1356
MaeII ACGT 4 cut(s) 112, 631, 1041, 1065
MaeIII GTNAC 5 cut(s) 28, 392, 955, 1109, 1196
MalI GATC 8 cut(s) 21, 231, 377, 510, 519, 564, 874, 945
MboI GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
MboII GAAGA 7 cut(s) 206, 276, 571, 623, 917, 1073, 1301
MfeI CAATTG 1 cut(s) 839
MflI RGATCY 3 cut(s) 375, 508, 872
MhlI GDGCHC 2 cut(s) 201, 1320
MluCI AATT 9 cut(s) 332, 401, 558, 839, 920, 930, 1009, 1070, 1089
MlyI GAGTC 3 cut(s) 543, 864, 1160
MmeI TCCRAC 3 cut(s) 30, 228, 437
MseI TTAA 7 cut(s) 182, 243, 315, 380, 864, 1080, 1137
MslI CAYNNNNRTG 3 cut(s) 350, 470, 503
MspA1I CMGCKG 1 cut(s) 1301
MspI CCGG 1 cut(s) 421
MunI CAATTG 1 cut(s) 839
MvnI CGCG 1 cut(s) 849
MwoI GCNNNNNNNGC 1 cut(s) 466
NcoI CCATGG 2 cut(s) 166, 189
NdeII GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
NlaIII CATG 7 cut(s) 20, 170, 193, 469, 644, 757, 835
NlaIV GGNNCC 1 cut(s) 157
NmuCI GTSAC 2 cut(s) 1109, 1196
NsbI TGCGCA 1 cut(s) 293
NspI RCATGY 1 cut(s) 469
PaeR7I CTCGAG 1 cut(s) 720
PagI TCATGA 2 cut(s) 16, 640
PceI AGGCCT 1 cut(s) 128
PciSI GCTCTTC 1 cut(s) 189
PfeI GAWTC 1 cut(s) 342
PkrI GCNGC 3 cut(s) 291, 361, 1300
PleI GAGTC 3 cut(s) 542, 863, 1160
PpsI GAGTC 3 cut(s) 542, 863, 1160
Psp124BI GAGCTC 1 cut(s) 201
Psp1406I AACGTT 1 cut(s) 1041
PspFI CCCAGC 1 cut(s) 827
PspN4I GGNNCC 1 cut(s) 157
PspPI GGNCC 2 cut(s) 155, 797
PspXI VCTCGAGB 1 cut(s) 720
PsuI RGATCY 3 cut(s) 375, 508, 872
PvuII CAGCTG 1 cut(s) 1301
RsaI GTAC 7 cut(s) 235, 254, 711, 783, 845, 1129, 1214
RsaNI GTAC 7 cut(s) 234, 253, 710, 782, 844, 1128, 1213
RseI CAYNNNNRTG 3 cut(s) 350, 470, 503
SacI GAGCTC 1 cut(s) 201
SalI GTCGAC 1 cut(s) 536
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 7 cut(s) 182, 243, 315, 380, 864, 1080, 1137
SatI GCNGC 3 cut(s) 290, 360, 1299
Sau3AI GATC 8 cut(s) 19, 229, 375, 508, 517, 562, 872, 943
Sau96I GGNCC 2 cut(s) 155, 797
ScaI AGTACT 2 cut(s) 254, 1214
SchI GAGTC 3 cut(s) 543, 864, 1160
SduI GDGCHC 2 cut(s) 201, 1320
SfaNI GCATC 3 cut(s) 346, 462, 604
SfcI CTRYAG 2 cut(s) 88, 150
Sfr274I CTCGAG 1 cut(s) 720
SlaI CTCGAG 1 cut(s) 720
SmiMI CAYNNNNRTG 3 cut(s) 350, 470, 503
SmlI CTYRAG 3 cut(s) 138, 720, 792
SmoI CTYRAG 3 cut(s) 138, 720, 792
SpeI ACTAGT 1 cut(s) 25
Sse9I AATT 9 cut(s) 332, 401, 558, 839, 920, 930, 1009, 1070, 1089
SseBI AGGCCT 1 cut(s) 128
SsiI CCGC 4 cut(s) 359, 469, 847, 1148
SspI AATATT 1 cut(s) 1247
SspMI CTAG 9 cut(s) 26, 350, 740, 750, 876, 1106, 1145, 1313, 1356
SstI GAGCTC 1 cut(s) 201
StuI AGGCCT 1 cut(s) 128
StyI CCWWGG 4 cut(s) 166, 189, 437, 1274
TaaI ACNGT 3 cut(s) 69, 1336, 1368
TaiI ACGT 4 cut(s) 115, 634, 1044, 1068
TaqI TCGA 4 cut(s) 35, 537, 721, 804
TasI AATT 9 cut(s) 332, 401, 558, 839, 920, 930, 1009, 1070, 1089
TatI WGTACW 3 cut(s) 252, 781, 1212
TauI GCSGC 1 cut(s) 362
TfiI GAWTC 1 cut(s) 342
Tru1I TTAA 7 cut(s) 182, 243, 315, 380, 864, 1080, 1137
Tru9I TTAA 7 cut(s) 182, 243, 315, 380, 864, 1080, 1137
TscAI CASTG 4 cut(s) 72, 291, 331, 547
TseFI GTSAC 2 cut(s) 1109, 1196
TseI GCWGC 2 cut(s) 289, 1298
Tsp45I GTSAC 2 cut(s) 1109, 1196
TspDTI ATGAA 5 cut(s) 345, 355, 487, 996, 1064
TspGWI ACGGA 1 cut(s) 623
TspRI CASTG 4 cut(s) 72, 291, 331, 547
XapI RAATTY 2 cut(s) 332, 920
XceI RCATGY 1 cut(s) 469
XhoI CTCGAG 1 cut(s) 720
XmiI GTMKAC 1 cut(s) 537
XspI CTAG 9 cut(s) 26, 350, 740, 750, 876, 1106, 1145, 1313, 1356
ZrmI AGTACT 2 cut(s) 254, 1214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.