Rw6G033220

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000131
Physical Location & Seq
Forward (+)
57707582 .. 57710603
3022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G033220.1

Sequence Viewer

Length: 1365 bp
ATGATCTACAATGAACCGGAGCCGTCAAATCTGCTGACTCTGGAGGCTACTCGACCGAGTTGGGGACTCGCCGAGAAGAAAGAACGACGAAACCCGTACATTTCGTTGGAAGCTTCAATGGGTGAGGAGCTATATAATGTGTCTCGTGTATCCCCAGTGCGTTGTATCTATCGAGTTCCTTACCGACTGAGACATGTACGTGAAAATGCCTATACACCCAAATTAGTTTCTATAGGGGCATTTCATCATGGTAACGCAGCCTTAAAACCCATGGAAGAACACAAAATGAGGTACCTGAAAGCTTTTTTAGATCGAAGCACACTTAACTTGTCGGGTTATATACTGAAAATAAAGGCTCAAGAAGAAAGACTGCGCAGTTGTTACATTGAGACTATTGAGCTTGATAGTGATGAATTTGCTAGAATCGTTCTTGTGGATGCCGCATTCATCATTGAAGTCTTACTGAGGTCCTATTATGGTCATTTGGTAGATGAAGATGATTGCATTTTCCGAAGACCAAGATTAATAGTGGATCTATTGCCTGACATGTTGTTACTTGAAAATCAATTGCCTTTCTTTATTCTTGAGGATCTTTGCCCAGACTTTATTGATTTAAGCTCCTGTGGAACTTCCGAGAGGCTTTCAATGGTCTTTCTCTCTCTCCAACTCTTACATAAAATGAAAGTATCGGGTATAGAAGGAACTGCGCAGGAAAATATGGTCAATATACGTTCTCAACAAGTAAAAGTAAAACATCTTCTTGATCTGTTGAGAACGTTATTGATACTACCAATTTCAAAATCACAAATTAGAGGGACTTTTCAACATTTTCCTAGCACGACAAAGCTACACCAAGCAGGAGTGAAGTTTAAAGTTGGACCAAGCAAAAACTTGTTCAGCATACGATTCACTAATGGGATTTTGGAAATTCCAAAGTTAACTATTACGGATAACACAGAGCTCATAATGAGAAATGTTGTTGCCTACGAGCAATGTGAATTTCCCTTTGAACTTCACATAAGTGCTTATGTTGTCATCCTTGATTATTTTGTAGATACTGCAAAAGATGTGGAGTTACTTGTCGATTCTGGTATTATTAAAAATTGTCTATGTGACAACAACGAGGTTTCTCGTTTGATCAACAGTCTCAATAGTGGAGTTGCACTGTCGCCTGGTGAATTTTATTTCTCTACCATTTCTCAAAAACTGAGCGAGTATTGCGATGTGAGGTGGCATAAAAGCATAGCAAATTTGAGGCAAAATTATTTCAACACACCTTGGCGTACCATCTCTGTGGTTGCAGCTGGTACTTTCCTTGTACTCACTTTTGTTCAAACTGTGTGCTCTGTTATGTCAGTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

454

Amino Acids

51.95

Weight (kDa)

6.61

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 56 - 441 5e-109 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 374, 708
Acc65I GGTACC 1 cut(s) 291
AccB1I GGYRCC 1 cut(s) 291
AciI CCGC 1 cut(s) 441
AclI AACGTT 1 cut(s) 776
AclWI GGATC 2 cut(s) 540, 597
AcsI RAATTY 5 cut(s) 413, 927, 998, 1178, 1249
AfaI GTAC 6 cut(s) 98, 198, 293, 1285, 1309, 1320
AfiI CCNNNNNNNGG 1 cut(s) 62
AflIII ACRYGT 2 cut(s) 193, 546
AgsI TTSAA 9 cut(s) 117, 455, 560, 645, 798, 824, 1010, 1270, 1334
AjnI CCWGG 1 cut(s) 1171
AleI CACNNNNGTG 1 cut(s) 1020
AluBI AGCT 8 cut(s) 113, 130, 302, 400, 618, 847, 961, 1304
AluI AGCT 8 cut(s) 113, 130, 302, 400, 618, 847, 961, 1304
Alw21I GWGCWC 2 cut(s) 963, 1346
Alw26I GTCTC 4 cut(s) 147, 184, 383, 1151
AlwI GGATC 2 cut(s) 540, 597
ApeKI GCWGC 2 cut(s) 257, 1301
ApoI RAATTY 5 cut(s) 413, 927, 998, 1178, 1249
AseI ATTAAT 1 cut(s) 524
Asp718I GGTACC 1 cut(s) 291
AspLEI GCGC 2 cut(s) 375, 709
AspS9I GGNCC 2 cut(s) 468, 878
AsuHPI GGTGA 2 cut(s) 134, 1187
AvaII GGWCC 2 cut(s) 468, 878
BanI GGYRCC 1 cut(s) 291
BanII GRGCYC 1 cut(s) 963
BarI GAAGNNNNNNTAC 2 cut(s) 741, 773
BauI CACGAG 1 cut(s) 144
BbsI GAAGAC 1 cut(s) 520
Bbv12I GWGCWC 2 cut(s) 963, 1346
BbvI GCAGC 2 cut(s) 269, 1313
BccI CCATC 1 cut(s) 1295
BceAI ACGGC 1 cut(s) 7
BciT130I CCWGG 1 cut(s) 1173
BciVI GTATCC 1 cut(s) 160
BclI TGATCA 1 cut(s) 1137
BcoDI GTCTC 4 cut(s) 147, 184, 383, 1151
BfaI CTAG 2 cut(s) 420, 834
BfmI CTRYAG 1 cut(s) 231
BfuI GTATCC 1 cut(s) 160
BisI GCNGC 3 cut(s) 258, 441, 1302
BlsI GCNGC 3 cut(s) 259, 442, 1303
Bme1390I CCNGG 1 cut(s) 1173
Bme18I GGWCC 2 cut(s) 468, 878
BmgT120I GGNCC 2 cut(s) 468, 878
BmiI GGNNCC 2 cut(s) 21, 293
BmrFI CCNGG 1 cut(s) 1173
BmrI ACTGGG 1 cut(s) 149
BmsI GCATC 1 cut(s) 427
BmuI ACTGGG 1 cut(s) 149
BpiI GAAGAC 1 cut(s) 520
BpmI CTGGAG 1 cut(s) 62
BpuEI CTTGAG 2 cut(s) 342, 605
BsaAI YACGTR 1 cut(s) 200
BsaJI CCNNGG 2 cut(s) 270, 1277
BsaWI WCCGGW 1 cut(s) 16
Bsc4I CCNNNNNNNGG 1 cut(s) 62
Bse1I ACTGG 1 cut(s) 155
Bse3DI GCAATG 1 cut(s) 998
BseBI CCWGG 1 cut(s) 1173
BseDI CCNNGG 2 cut(s) 270, 1277
BseGI GGATG 2 cut(s) 442, 1035
BseLI CCNNNNNNNGG 1 cut(s) 62
BseMI GCAATG 1 cut(s) 998
BseMII CTCAG 3 cut(s) 179, 455, 1199
BseNI ACTGG 1 cut(s) 155
BseRI GAGGAG 1 cut(s) 140
BseXI GCAGC 2 cut(s) 269, 1313
Bsh1285I CGRYCG 1 cut(s) 56
BshNI GGYRCC 1 cut(s) 291
BsiEI CGRYCG 1 cut(s) 56
BsiHKAI GWGCWC 2 cut(s) 963, 1346
BsiSI CCGG 1 cut(s) 17
BslFI GGGAC 2 cut(s) 78, 829
BslI CCNNNNNNNGG 1 cut(s) 62
BsmAI GTCTC 4 cut(s) 147, 184, 383, 1151
BsmFI GGGAC 2 cut(s) 78, 829
BsmI GAATGC 1 cut(s) 443
Bsp1286I GDGCHC 2 cut(s) 963, 1346
Bsp143I GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
Bsp19I CCATGG 1 cut(s) 270
BspACI CCGC 1 cut(s) 441
BspCNI CTCAG 3 cut(s) 180, 456, 1200
BspLI GGNNCC 2 cut(s) 21, 293
BspPI GGATC 2 cut(s) 540, 597
BspT107I GGYRCC 1 cut(s) 291
BsrDI GCAATG 1 cut(s) 998
BsrI ACTGG 1 cut(s) 155
BssECI CCNNGG 2 cut(s) 270, 1277
BssMI GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
BssSI CACGAG 1 cut(s) 144
BssT1I CCWWGG 2 cut(s) 270, 1277
Bst2BI CACGAG 1 cut(s) 144
Bst2UI CCWGG 1 cut(s) 1173
Bst4CI ACNGT 3 cut(s) 1145, 1167, 1339
BstBAI YACGTR 1 cut(s) 200
BstDEI CTNAG 3 cut(s) 188, 464, 1208
BstDSI CCRYGG 1 cut(s) 270
BstF5I GGATG 2 cut(s) 442, 1035
BstHHI GCGC 2 cut(s) 375, 709
BstKTI GATC 6 cut(s) 6, 313, 535, 592, 766, 1140
BstMAI GTCTC 4 cut(s) 147, 184, 383, 1151
BstMBI GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
BstMCI CGRYCG 1 cut(s) 56
BstMWI GCNNNNNNNGC 1 cut(s) 1218
BstNI CCWGG 1 cut(s) 1173
BstNSI RCATGY 2 cut(s) 197, 550
BstSCI CCNGG 1 cut(s) 1171
BstSFI CTRYAG 1 cut(s) 231
BstV1I GCAGC 2 cut(s) 269, 1313
BstV2I GAAGAC 1 cut(s) 520
BstX2I RGATCY 2 cut(s) 532, 589
BstXI CCANNNNNNTGG 1 cut(s) 1294
BstYI RGATCY 2 cut(s) 532, 589
BsuI GTATCC 1 cut(s) 160
BtgI CCRYGG 1 cut(s) 270
BtgZI GCGATG 1 cut(s) 1236
BtsCI GGATG 2 cut(s) 442, 1035
BtsIMutI CAGTG 2 cut(s) 162, 1163
CfoI GCGC 2 cut(s) 375, 709
Cfr13I GGNCC 2 cut(s) 468, 878
Csp6I GTAC 6 cut(s) 97, 197, 292, 1284, 1308, 1319
CspCI CAANNNNNGTGG 2 cut(s) 1050, 1085
CviAII CATG 4 cut(s) 194, 248, 271, 547
CviQI GTAC 6 cut(s) 97, 197, 292, 1284, 1308, 1319
DdeI CTNAG 3 cut(s) 188, 464, 1208
DpnI GATC 6 cut(s) 5, 312, 534, 591, 765, 1139
DpnII GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
DraI TTTAAA 1 cut(s) 871
Ecl136II GAGCTC 1 cut(s) 961
Eco130I CCWWGG 2 cut(s) 270, 1277
Eco24I GRGCYC 1 cut(s) 963
Eco47I GGWCC 2 cut(s) 468, 878
Eco53kI GAGCTC 1 cut(s) 961
EcoICRI GAGCTC 1 cut(s) 961
EcoO109I RGGNCCY 1 cut(s) 468
EcoRII CCWGG 1 cut(s) 1171
EcoT14I CCWWGG 2 cut(s) 270, 1277
EcoT38I GRGCYC 1 cut(s) 963
ErhI CCWWGG 2 cut(s) 270, 1277
FaeI CATG 4 cut(s) 197, 251, 274, 550
FaqI GGGAC 2 cut(s) 78, 829
FatI CATG 4 cut(s) 193, 247, 270, 546
FbaI TGATCA 1 cut(s) 1137
Fnu4HI GCNGC 3 cut(s) 258, 441, 1302
FokI GGATG 2 cut(s) 449, 1022
FriOI GRGCYC 1 cut(s) 963
Fsp4HI GCNGC 3 cut(s) 258, 441, 1302
FspBI CTAG 2 cut(s) 420, 834
FspI TGCGCA 2 cut(s) 374, 708
GlaI GCGC 2 cut(s) 374, 708
GluI GCNGC 3 cut(s) 258, 441, 1302
GsuI CTGGAG 1 cut(s) 62
HapII CCGG 1 cut(s) 17
HhaI GCGC 2 cut(s) 375, 709
Hin1II CATG 4 cut(s) 197, 251, 274, 550
Hin6I GCGC 2 cut(s) 373, 707
HinP1I GCGC 2 cut(s) 373, 707
HincII GTYRAC 1 cut(s) 939
HindII GTYRAC 1 cut(s) 939
HindIII AAGCTT 2 cut(s) 111, 300
HinfI GANTC 5 cut(s) 37, 66, 423, 906, 1085
HpaI GTTAAC 1 cut(s) 939
HpaII CCGG 1 cut(s) 17
HphI GGTGA 2 cut(s) 134, 1187
Hpy166II GTNNAC 1 cut(s) 939
Hpy188I TCNGA 2 cut(s) 512, 634
Hpy188III TCNNGA 4 cut(s) 41, 359, 584, 761
Hpy8I GTNNAC 1 cut(s) 939
Hpy99I CGWCG 1 cut(s) 90
HpyAV CCTTC 1 cut(s) 692
HpyCH4III ACNGT 3 cut(s) 1145, 1167, 1339
HpyCH4IV ACGT 3 cut(s) 199, 730, 776
HpyCH4V TGCA 4 cut(s) 504, 1061, 1163, 1301
HpyF10VI GCNNNNNNNGC 1 cut(s) 1218
HpyF3I CTNAG 3 cut(s) 188, 464, 1208
HpySE526I ACGT 3 cut(s) 199, 730, 776
Hsp92II CATG 4 cut(s) 197, 251, 274, 550
HspAI GCGC 2 cut(s) 373, 707
KpnI GGTACC 1 cut(s) 295
Ksp22I TGATCA 1 cut(s) 1137
KspAI GTTAAC 1 cut(s) 939
Kzo9I GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
LmnI GCTCC 3 cut(s) 19, 127, 623
Lsp1109I GCAGC 2 cut(s) 269, 1313
LweI GCATC 1 cut(s) 427
MaeI CTAG 2 cut(s) 420, 834
MaeII ACGT 3 cut(s) 199, 730, 776
MaeIII GTNAC 5 cut(s) 251, 380, 552, 1074, 1112
MalI GATC 6 cut(s) 5, 312, 534, 591, 765, 1139
MboI GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
MboII GAAGA 6 cut(s) 88, 287, 374, 506, 525, 749
MfeI CAATTG 1 cut(s) 566
MflI RGATCY 2 cut(s) 532, 589
MhlI GDGCHC 2 cut(s) 963, 1346
MlyI GAGTC 2 cut(s) 31, 60
MmeI TCCRAC 3 cut(s) 87, 688, 856
MseI TTAA 8 cut(s) 263, 324, 524, 614, 870, 938, 1098, 1363
MslI CAYNNNNRTG 3 cut(s) 198, 1020, 1292
MspA1I CMGCKG 1 cut(s) 1304
MspI CCGG 1 cut(s) 17
MspR9I CCNGG 1 cut(s) 1173
MunI CAATTG 1 cut(s) 566
Mva1269I GAATGC 1 cut(s) 443
MvaI CCWGG 1 cut(s) 1173
MwoI GCNNNNNNNGC 1 cut(s) 1218
NcoI CCATGG 1 cut(s) 270
NdeII GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
NlaIII CATG 4 cut(s) 197, 251, 274, 550
NlaIV GGNNCC 2 cut(s) 21, 293
NmeAIII GCCGAG 1 cut(s) 97
NmuCI GTSAC 1 cut(s) 1112
NsbI TGCGCA 2 cut(s) 374, 708
NspI RCATGY 2 cut(s) 197, 550
OliI CACNNNNGTG 1 cut(s) 1020
PciI ACATGT 2 cut(s) 193, 546
PctI GAATGC 1 cut(s) 443
PfeI GAWTC 3 cut(s) 423, 906, 1085
PkrI GCNGC 3 cut(s) 259, 442, 1303
PleI GAGTC 2 cut(s) 31, 60
PpsI GAGTC 2 cut(s) 31, 60
Ppu21I YACGTR 1 cut(s) 200
PpuMI RGGWCCY 1 cut(s) 468
PscI ACATGT 2 cut(s) 193, 546
PshBI ATTAAT 1 cut(s) 524
Psp124BI GAGCTC 1 cut(s) 963
Psp1406I AACGTT 1 cut(s) 776
Psp5II RGGWCCY 1 cut(s) 468
Psp6I CCWGG 1 cut(s) 1171
PspGI CCWGG 1 cut(s) 1171
PspN4I GGNNCC 2 cut(s) 21, 293
PspPI GGNCC 2 cut(s) 468, 878
PspPPI RGGWCCY 1 cut(s) 468
PsuI RGATCY 2 cut(s) 532, 589
PvuII CAGCTG 1 cut(s) 1304
RsaI GTAC 6 cut(s) 98, 198, 293, 1285, 1309, 1320
RsaNI GTAC 6 cut(s) 97, 197, 292, 1284, 1308, 1319
RseI CAYNNNNRTG 3 cut(s) 198, 1020, 1292
SacI GAGCTC 1 cut(s) 963
SaqAI TTAA 8 cut(s) 263, 324, 524, 614, 870, 938, 1098, 1363
SatI GCNGC 3 cut(s) 258, 441, 1302
Sau3AI GATC 6 cut(s) 3, 310, 532, 589, 763, 1137
Sau96I GGNCC 2 cut(s) 468, 878
SchI GAGTC 2 cut(s) 31, 60
ScrFI CCNGG 1 cut(s) 1173
SduI GDGCHC 2 cut(s) 963, 1346
SfaNI GCATC 1 cut(s) 427
SfcI CTRYAG 1 cut(s) 231
SinI GGWCC 2 cut(s) 468, 878
SmiMI CAYNNNNRTG 3 cut(s) 198, 1020, 1292
SmlI CTYRAG 2 cut(s) 357, 584
SmoI CTYRAG 2 cut(s) 357, 584
SsiI CCGC 1 cut(s) 441
SspMI CTAG 2 cut(s) 420, 834
SstI GAGCTC 1 cut(s) 963
StyD4I CCNGG 1 cut(s) 1171
StyI CCWWGG 2 cut(s) 270, 1277
TaaI ACNGT 3 cut(s) 1145, 1167, 1339
TaiI ACGT 3 cut(s) 202, 733, 779
TaqI TCGA 4 cut(s) 52, 172, 313, 1083
TaqII GACCGA 1 cut(s) 70
TatI WGTACW 1 cut(s) 1318
TauI GCSGC 1 cut(s) 443
TfiI GAWTC 3 cut(s) 423, 906, 1085
Tru1I TTAA 8 cut(s) 263, 324, 524, 614, 870, 938, 1098, 1363
Tru9I TTAA 8 cut(s) 263, 324, 524, 614, 870, 938, 1098, 1363
TscAI CASTG 2 cut(s) 162, 1170
TseFI GTSAC 1 cut(s) 1112
TseI GCWGC 2 cut(s) 257, 1301
Tsp45I GTSAC 1 cut(s) 1112
TspDTI ATGAA 6 cut(s) 27, 233, 426, 436, 507, 695
TspGWI ACGGA 1 cut(s) 962
TspRI CASTG 2 cut(s) 162, 1170
VpaK11BI GGWCC 2 cut(s) 468, 878
VspI ATTAAT 1 cut(s) 524
XapI RAATTY 5 cut(s) 413, 927, 998, 1178, 1249
XceI RCATGY 2 cut(s) 197, 550
XspI CTAG 2 cut(s) 420, 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.