Rmu_sc0007115.1_g000011

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007115.1
OG0000131
Physical Location & Seq
Reverse (-)
30579 .. 33855
3277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007115.1_g000011.1.cds

Sequence Viewer

Length: 1716 bp
atggaagtaagcaatcaagctactccaagtgaaaagggaaacccgtgcatttcattagaagcttcaatgcgtgaggagctgtgtaatgcgtctcgtgtatccccaatgcgttgtatctatcgagttccttatcgactgagacatgtacatgaaaaggcctatacccccaagttagtttctataggggaatttcatcatggtaacaaagccttaaaacccatggaagaacacaaaatgaggtacctaaaagcttttttagatcggagcacgttgagcttgtcaggttgtatactgaaaataaaggctcaagaagaaagactgcgcagttgctacattgagactattgagcttgatagtgatgaatttgctagaatcgttcttgtggatgccacattcataattgaagtcttactaagatcatattatggtcatttggtagatgaagatgattgcattttccgaagaccaagattaatatcggatatatggcctgacatgttgttacttgaaaatcaactgccattcttcattctcgaggacctttgcccatacaccatcaattttggctccagtggaactaccaagaggccttcaatggtctctctctctatgcagttcttctataactataatatattggatatagaaggaactatgcaggaaaatgtggacaaaatacgttctcataaaatagaagtaaagcatattcttgatttgctgagaacattattaatactaccaataatgtcggaatcacaaattagagggacttttcaaacttttcctagcacgacagagttacaccaagcaggagtgaagtttaaagtcagacaaagcaaaagcttgttcagcatacaattcactgatgggattttggaaattccaaagttaactattgtggataacacagagtttacaatgagaaatgttgttgcctacgagcaatgtgaatttttcaaggaacgacacataagtgcttatgttgccatcctcgattgtttagtagacactgcaaaagatgtggagttacttgtcgactatggtattattgatagttggctaggtgatagcaagcaggtttctcgtttgataaacagtcttagcagtggagttgtgataaatactgatacattttatttctctactatttgtcaaaacttgagcgagtattgcgatgcgggacctgccttgtcctcgaccctagtcgttgagtcgccagtcctcgccggaggaaccccgtcccagatttgtttgcacgactcaagacgtcgccgcctgccccatcagtcttgtggcggtttccccagcggaccgaagattttctacagcaaacccaacccccattggttagatctgtggcatagcaatcgccgactccgactgccaatatgtcatcttcccatcactcatgatcatgatccagcaacggcccgctatgtgccctactcggtcggagacggttcacacctggtgctgttccaacccaacaaagcggtacaaccccttcttctccctaccaaccacgatcagatagagtttggaactagaaaggcatcgccgggaagcatgcttgccgcgactgggaagcacacacagaggaagtcatgcgccaaggtaacgacgccgagagctgtgctggaaagttactccatcaatgatgtaggaaggtacagagaggccgagagcggcgctctcccaaccctagtagagcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

571

Amino Acids

64.81

Weight (kDa)

6.85

Isoelectric Point (pI)

51.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1270
Acc16I TGCGCA 1 cut(s) 323
Acc36I ACCTGC 2 cut(s) 1066, 1192
Acc65I GGTACC 1 cut(s) 240
AccB1I GGYRCC 1 cut(s) 240
AccBSI CCGCTC 1 cut(s) 1686
AccI GTMKAC 3 cut(s) 289, 1005, 1035
AccII CGCG 1 cut(s) 1577
AciI CCGC 8 cut(s) 1178, 1273, 1296, 1308, 1432, 1493, 1575, 1686
AclWI GGATC 1 cut(s) 1412
AcsI RAATTY 4 cut(s) 188, 362, 879, 950
AcyI GRCGYC 2 cut(s) 1267, 1622
AdeI CACNNNGTG 1 cut(s) 1471
AfaI GTAC 4 cut(s) 147, 242, 1497, 1670
AfeI AGCGCT 1 cut(s) 1712
AfiI CCNNNNNNNGG 1 cut(s) 1581
AflIII ACRYGT 2 cut(s) 142, 495
AgsI TTSAA 6 cut(s) 66, 404, 509, 594, 776, 958
AjnI CCWGG 1 cut(s) 1467
AleI CACNNNNGTG 1 cut(s) 972
AluBI AGCT 8 cut(s) 20, 62, 79, 251, 276, 349, 843, 1631
AluI AGCT 8 cut(s) 20, 62, 79, 251, 276, 349, 843, 1631
Alw21I GWGCWC 1 cut(s) 269
Alw26I GTCTC 5 cut(s) 96, 133, 332, 604, 1449
AlwI GGATC 1 cut(s) 1412
Ama87I CYCGRG 1 cut(s) 533
Aor51HI AGCGCT 1 cut(s) 1712
AoxI GGCC 5 cut(s) 156, 488, 587, 1428, 1677
ApoI RAATTY 4 cut(s) 188, 362, 879, 950
AseI ATTAAT 2 cut(s) 473, 731
Asp700I GAANNNNTTC 1 cut(s) 1319
Asp718I GGTACC 1 cut(s) 240
AspLEI GCGC 4 cut(s) 324, 1610, 1691, 1713
AspS9I GGNCC 4 cut(s) 538, 1181, 1310, 1429
AsuC2I CCSGG 1 cut(s) 1560
AsuHPI GGTGA 1 cut(s) 1076
AvaI CYCGRG 1 cut(s) 533
AvaII GGWCC 3 cut(s) 538, 1181, 1310
BaeGI GKGCMC 1 cut(s) 1443
BanI GGYRCC 1 cut(s) 240
BarI GAAGNNNNNNTAC 4 cut(s) 1307, 1339, 1488, 1520
BauI CACGAG 1 cut(s) 93
BbsI GAAGAC 1 cut(s) 469
Bbv12I GWGCWC 1 cut(s) 269
BccI CCATC 6 cut(s) 563, 860, 995, 1290, 1409, 1658
BceAI ACGGC 1 cut(s) 1443
BcgI CGANNNNNNTGC 6 cut(s) 1064, 1098, 1349, 1383, 1615, 1649
BciT130I CCWGG 1 cut(s) 1469
BciVI GTATCC 1 cut(s) 109
BclI TGATCA 1 cut(s) 1411
BcnI CCSGG 1 cut(s) 1560
BcoDI GTCTC 5 cut(s) 96, 133, 332, 604, 1449
BfaI CTAG 7 cut(s) 369, 786, 1061, 1202, 1545, 1703, 1714
BfmI CTRYAG 2 cut(s) 180, 1324
BfoI RGCGCY 2 cut(s) 1692, 1714
BfuAI ACCTGC 2 cut(s) 1066, 1192
BfuI GTATCC 1 cut(s) 109
BglII AGATCT 1 cut(s) 1351
BisI GCNGC 3 cut(s) 1273, 1575, 1687
BlsI GCNGC 3 cut(s) 1274, 1576, 1688
Bme1390I CCNGG 2 cut(s) 1469, 1560
Bme18I GGWCC 3 cut(s) 538, 1181, 1310
BmeT110I CYCGRG 1 cut(s) 533
BmgT120I GGNCC 4 cut(s) 538, 1181, 1310, 1429
BmiI GGNNCC 4 cut(s) 242, 568, 1182, 1234
BmrFI CCNGG 2 cut(s) 1469, 1560
BmrI ACTGGG 1 cut(s) 1590
BmsI GCATC 3 cut(s) 376, 1165, 1562
BmuI ACTGGG 1 cut(s) 1590
BoxI GACNNNNGTC 1 cut(s) 1202
BpiI GAAGAC 1 cut(s) 469
BplI GAGNNNNNCTC 2 cut(s) 1675, 1707
BpmI CTGGAG 1 cut(s) 553
BpuEI CTTGAG 3 cut(s) 291, 1180, 1246
BpuMI CCSGG 1 cut(s) 1560
BsaBI GATNNNNATC 2 cut(s) 475, 1416
BsaHI GRCGYC 2 cut(s) 1267, 1622
BsaI GGTCTC 1 cut(s) 604
BsaJI CCNNGG 2 cut(s) 219, 1611
Bsc4I CCNNNNNNNGG 1 cut(s) 1581
Bse1I ACTGG 3 cut(s) 570, 1217, 1585
Bse3DI GCAATG 1 cut(s) 950
Bse8I GATNNNNATC 2 cut(s) 475, 1416
BseBI CCWGG 1 cut(s) 1469
BseDI CCNNGG 2 cut(s) 219, 1611
BseGI GGATG 2 cut(s) 391, 987
BseJI GATNNNNATC 2 cut(s) 475, 1416
BseLI CCNNNNNNNGG 1 cut(s) 1581
BseMI GCAATG 1 cut(s) 950
BseMII CTCAG 2 cut(s) 128, 710
BseNI ACTGG 3 cut(s) 570, 1217, 1585
BseRI GAGGAG 1 cut(s) 89
BseSI GKGCMC 1 cut(s) 1443
BseYI CCCAGC 1 cut(s) 1304
Bsh1236I CGCG 1 cut(s) 1577
Bsh1285I CGRYCG 1 cut(s) 1452
BshFI GGCC 5 cut(s) 158, 490, 589, 1430, 1679
BshNI GGYRCC 1 cut(s) 240
BsiEI CGRYCG 1 cut(s) 1452
BsiHKAI GWGCWC 1 cut(s) 269
BsiHKCI CYCGRG 1 cut(s) 533
BsiSI CCGG 2 cut(s) 1227, 1559
BslFI GGGAC 3 cut(s) 781, 1194, 1225
BslI CCNNNNNNNGG 1 cut(s) 1581
BsmAI GTCTC 5 cut(s) 96, 133, 332, 604, 1449
BsmBI CGTCTC 2 cut(s) 96, 1449
BsmFI GGGAC 3 cut(s) 781, 1194, 1225
BsnI GGCC 5 cut(s) 158, 490, 589, 1430, 1679
Bso31I GGTCTC 1 cut(s) 604
BsoBI CYCGRG 1 cut(s) 533
Bsp1286I GDGCHC 2 cut(s) 269, 1443
Bsp1407I TGTACA 1 cut(s) 145
Bsp143I GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
Bsp19I CCATGG 1 cut(s) 219
BspACI CCGC 8 cut(s) 1178, 1273, 1296, 1308, 1432, 1493, 1575, 1686
BspANI GGCC 5 cut(s) 158, 490, 589, 1430, 1679
BspCNI CTCAG 2 cut(s) 129, 711
BspFNI CGCG 1 cut(s) 1577
BspHI TCATGA 2 cut(s) 1408, 1414
BspLI GGNNCC 4 cut(s) 242, 568, 1182, 1234
BspMI ACCTGC 2 cut(s) 1066, 1192
BspPI GGATC 1 cut(s) 1412
BspT107I GGYRCC 1 cut(s) 240
BspTNI GGTCTC 1 cut(s) 604
BsrBI CCGCTC 1 cut(s) 1686
BsrDI GCAATG 1 cut(s) 950
BsrGI TGTACA 1 cut(s) 145
BsrI ACTGG 3 cut(s) 570, 1217, 1585
BssECI CCNNGG 2 cut(s) 219, 1611
BssMI GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
BssNAI GTATAC 1 cut(s) 290
BssNI GRCGYC 2 cut(s) 1267, 1622
BssSI CACGAG 1 cut(s) 93
BssT1I CCWWGG 2 cut(s) 219, 1611
Bst1107I GTATAC 1 cut(s) 290
Bst2BI CACGAG 1 cut(s) 93
Bst2UI CCWGG 1 cut(s) 1469
Bst4CI ACNGT 2 cut(s) 1097, 1460
BstACI GRCGYC 2 cut(s) 1267, 1622
BstAUI TGTACA 1 cut(s) 145
BstC8I GCNNGC 5 cut(s) 1073, 1277, 1432, 1568, 1572
BstDEI CTNAG 4 cut(s) 137, 413, 719, 1100
BstDSI CCRYGG 1 cut(s) 219
BstF5I GGATG 2 cut(s) 391, 987
BstFNI CGCG 1 cut(s) 1577
BstH2I RGCGCY 2 cut(s) 1692, 1714
BstHHI GCGC 4 cut(s) 324, 1610, 1691, 1713
BstKTI GATC 6 cut(s) 262, 419, 1354, 1414, 1420, 1528
BstMAI GTCTC 5 cut(s) 96, 133, 332, 604, 1449
BstMBI GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
BstMCI CGRYCG 1 cut(s) 1452
BstMWI GCNNNNNNNGC 6 cut(s) 76, 273, 849, 983, 1170, 1184
BstNI CCWGG 1 cut(s) 1469
BstNSI RCATGY 3 cut(s) 146, 499, 1570
BstPAI GACNNNNGTC 1 cut(s) 1202
BstSCI CCNGG 2 cut(s) 1467, 1558
BstSFI CTRYAG 2 cut(s) 180, 1324
BstSLI GKGCMC 1 cut(s) 1443
BstUI CGCG 1 cut(s) 1577
BstV2I GAAGAC 1 cut(s) 469
BstX2I RGATCY 1 cut(s) 1351
BstYI RGATCY 1 cut(s) 1351
BstZ17I GTATAC 1 cut(s) 290
BsuI GTATCC 1 cut(s) 109
BsuRI GGCC 5 cut(s) 158, 490, 589, 1430, 1679
BtgI CCRYGG 1 cut(s) 219
BtgZI GCGATG 2 cut(s) 1188, 1539
BtsCI GGATG 2 cut(s) 391, 987
BtsI GCAGTG 2 cut(s) 1008, 1111
BtsIMutI CAGTG 4 cut(s) 577, 861, 1008, 1111
BveI ACCTGC 2 cut(s) 1066, 1192
Cac8I GCNNGC 5 cut(s) 1073, 1277, 1432, 1568, 1572
CciI TCATGA 2 cut(s) 1408, 1414
CfoI GCGC 4 cut(s) 324, 1610, 1691, 1713
Cfr13I GGNCC 4 cut(s) 538, 1181, 1310, 1429
CpoI CGGWCCG 1 cut(s) 1310
CseI GACGC 2 cut(s) 78, 1630
CsiI ACCWGGT 1 cut(s) 1467
Csp6I GTAC 4 cut(s) 146, 241, 1496, 1669
CspCI CAANNNNNGTGG 2 cut(s) 1002, 1037
CspI CGGWCCG 1 cut(s) 1310
CviAII CATG 9 cut(s) 143, 149, 197, 220, 496, 1409, 1415, 1567, 1605
CviQI GTAC 4 cut(s) 146, 241, 1496, 1669
DdeI CTNAG 4 cut(s) 137, 413, 719, 1100
DpnI GATC 6 cut(s) 261, 418, 1353, 1413, 1419, 1527
DpnII GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
DraI TTTAAA 1 cut(s) 823
DraIII CACNNNGTG 1 cut(s) 1471
Eco130I CCWWGG 2 cut(s) 219, 1611
Eco147I AGGCCT 2 cut(s) 158, 589
Eco31I GGTCTC 1 cut(s) 604
Eco47I GGWCC 3 cut(s) 538, 1181, 1310
Eco47III AGCGCT 1 cut(s) 1712
Eco88I CYCGRG 1 cut(s) 533
EcoO109I RGGNCCY 2 cut(s) 538, 1181
EcoRII CCWGG 1 cut(s) 1467
EcoT14I CCWWGG 2 cut(s) 219, 1611
ErhI CCWWGG 2 cut(s) 219, 1611
Esp3I CGTCTC 2 cut(s) 96, 1449
FaeI CATG 9 cut(s) 146, 152, 200, 223, 499, 1412, 1418, 1570, 1608
FaqI GGGAC 3 cut(s) 781, 1194, 1225
FatI CATG 9 cut(s) 142, 148, 196, 219, 495, 1408, 1414, 1566, 1604
FauI CCCGC 2 cut(s) 1171, 1439
FbaI TGATCA 1 cut(s) 1411
FblI GTMKAC 3 cut(s) 289, 1005, 1035
Fnu4HI GCNGC 3 cut(s) 1273, 1575, 1687
FokI GGATG 2 cut(s) 398, 974
Fsp4HI GCNGC 3 cut(s) 1273, 1575, 1687
FspBI CTAG 7 cut(s) 369, 786, 1061, 1202, 1545, 1703, 1714
FspI TGCGCA 1 cut(s) 323
GlaI GCGC 4 cut(s) 323, 1609, 1690, 1712
GluI GCNGC 3 cut(s) 1273, 1575, 1687
GsaI CCCAGC 1 cut(s) 1308
GsuI CTGGAG 1 cut(s) 553
HaeII RGCGCY 2 cut(s) 1692, 1714
HaeIII GGCC 5 cut(s) 158, 490, 589, 1430, 1679
HapII CCGG 2 cut(s) 1227, 1559
HgaI GACGC 2 cut(s) 78, 1630
HhaI GCGC 4 cut(s) 324, 1610, 1691, 1713
Hin1I GRCGYC 2 cut(s) 1267, 1622
Hin1II CATG 9 cut(s) 146, 152, 200, 223, 499, 1412, 1418, 1570, 1608
Hin6I GCGC 4 cut(s) 322, 1608, 1689, 1711
HinP1I GCGC 4 cut(s) 322, 1608, 1689, 1711
HincII GTYRAC 2 cut(s) 891, 1036
HindII GTYRAC 2 cut(s) 891, 1036
HindIII AAGCTT 3 cut(s) 60, 249, 841
HinfI GANTC 5 cut(s) 372, 752, 1211, 1259, 1374
HpaI GTTAAC 1 cut(s) 891
HpaII CCGG 2 cut(s) 1227, 1559
HphI GGTGA 1 cut(s) 1076
Hpy166II GTNNAC 7 cut(s) 290, 670, 891, 915, 1006, 1036, 1463
Hpy188I TCNGA 8 cut(s) 264, 461, 481, 751, 830, 1379, 1454, 1530
Hpy188III TCNNGA 6 cut(s) 308, 533, 710, 1263, 1409, 1415
Hpy8I GTNNAC 7 cut(s) 290, 670, 891, 915, 1006, 1036, 1463
Hpy99I CGWCG 2 cut(s) 1272, 1624
HpyAV CCTTC 4 cut(s) 600, 641, 1514, 1659
HpyCH4III ACNGT 2 cut(s) 1097, 1460
HpyCH4IV ACGT 3 cut(s) 269, 679, 1267
HpyCH4V TGCA 6 cut(s) 48, 453, 613, 658, 1013, 1255
HpyF10VI GCNNNNNNNGC 6 cut(s) 76, 273, 849, 983, 1170, 1184
HpyF3I CTNAG 4 cut(s) 137, 413, 719, 1100
HpySE526I ACGT 3 cut(s) 269, 679, 1267
Hsp92I GRCGYC 2 cut(s) 1267, 1622
Hsp92II CATG 9 cut(s) 146, 152, 200, 223, 499, 1412, 1418, 1570, 1608
HspAI GCGC 4 cut(s) 322, 1608, 1689, 1711
KpnI GGTACC 1 cut(s) 244
Ksp22I TGATCA 1 cut(s) 1411
KspAI GTTAAC 1 cut(s) 891
Kzo9I GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
LmnI GCTCC 3 cut(s) 76, 264, 572
LweI GCATC 3 cut(s) 376, 1165, 1562
MabI ACCWGGT 1 cut(s) 1467
MaeI CTAG 7 cut(s) 369, 786, 1061, 1202, 1545, 1703, 1714
MaeII ACGT 3 cut(s) 269, 679, 1267
MaeIII GTNAC 6 cut(s) 200, 501, 798, 1026, 1615, 1643
MalI GATC 6 cut(s) 261, 418, 1353, 1413, 1419, 1527
MbiI CCGCTC 1 cut(s) 1686
MboI GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
MboII GAAGA 9 cut(s) 236, 323, 455, 474, 517, 610, 1327, 1388, 1499
MflI RGATCY 1 cut(s) 1351
MhlI GDGCHC 2 cut(s) 269, 1443
MluCI AATT 8 cut(s) 188, 362, 399, 559, 759, 857, 879, 950
MlyI GAGTC 3 cut(s) 1220, 1253, 1368
MmeI TCCRAC 4 cut(s) 729, 1402, 1432, 1504
MroXI GAANNNNTTC 1 cut(s) 1319
MseI TTAA 5 cut(s) 212, 473, 731, 822, 890
MslI CAYNNNNRTG 3 cut(s) 147, 972, 1413
MspA1I CMGCKG 1 cut(s) 1308
MspI CCGG 2 cut(s) 1227, 1559
MspR9I CCNGG 2 cut(s) 1469, 1560
MvaI CCWGG 1 cut(s) 1469
MvnI CGCG 1 cut(s) 1577
MwoI GCNNNNNNNGC 6 cut(s) 76, 273, 849, 983, 1170, 1184
NciI CCSGG 1 cut(s) 1560
NcoI CCATGG 1 cut(s) 219
NdeII GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
NlaIII CATG 9 cut(s) 146, 152, 200, 223, 499, 1412, 1418, 1570, 1608
NlaIV GGNNCC 4 cut(s) 242, 568, 1182, 1234
NmeAIII GCCGAG 2 cut(s) 1650, 1705
NsbI TGCGCA 1 cut(s) 323
NspI RCATGY 3 cut(s) 146, 499, 1570
OliI CACNNNNGTG 1 cut(s) 972
PaeI GCATGC 1 cut(s) 1570
PaeR7I CTCGAG 1 cut(s) 533
PagI TCATGA 2 cut(s) 1408, 1414
PceI AGGCCT 2 cut(s) 158, 589
PciI ACATGT 2 cut(s) 142, 495
PcsI WCGNNNNNNNCGW 1 cut(s) 1375
PdmI GAANNNNTTC 1 cut(s) 1319
PfeI GAWTC 2 cut(s) 372, 752
PkrI GCNGC 3 cut(s) 1274, 1576, 1688
PleI GAGTC 3 cut(s) 1219, 1253, 1368
PpsI GAGTC 3 cut(s) 1219, 1253, 1368
PpuMI RGGWCCY 2 cut(s) 538, 1181
PscI ACATGT 2 cut(s) 142, 495
PshAI GACNNNNGTC 1 cut(s) 1202
PshBI ATTAAT 2 cut(s) 473, 731
Psp5II RGGWCCY 2 cut(s) 538, 1181
Psp6I CCWGG 1 cut(s) 1467
PspFI CCCAGC 1 cut(s) 1304
PspGI CCWGG 1 cut(s) 1467
PspN4I GGNNCC 4 cut(s) 242, 568, 1182, 1234
PspPI GGNCC 4 cut(s) 538, 1181, 1310, 1429
PspPPI RGGWCCY 2 cut(s) 538, 1181
PsuI RGATCY 1 cut(s) 1351
RsaI GTAC 4 cut(s) 147, 242, 1497, 1670
RsaNI GTAC 4 cut(s) 146, 241, 1496, 1669
RseI CAYNNNNRTG 3 cut(s) 147, 972, 1413
Rsr2I CGGWCCG 1 cut(s) 1310
RsrII CGGWCCG 1 cut(s) 1310
SalI GTCGAC 1 cut(s) 1034
SaqAI TTAA 5 cut(s) 212, 473, 731, 822, 890
SatI GCNGC 3 cut(s) 1273, 1575, 1687
Sau3AI GATC 6 cut(s) 259, 416, 1351, 1411, 1417, 1525
Sau96I GGNCC 4 cut(s) 538, 1181, 1310, 1429
SchI GAGTC 3 cut(s) 1220, 1253, 1368
ScrFI CCNGG 2 cut(s) 1469, 1560
SduI GDGCHC 2 cut(s) 269, 1443
SexAI ACCWGGT 1 cut(s) 1467
SfaNI GCATC 3 cut(s) 376, 1165, 1562
SfcI CTRYAG 2 cut(s) 180, 1324
Sfr274I CTCGAG 1 cut(s) 533
SinI GGWCC 3 cut(s) 538, 1181, 1310
SlaI CTCGAG 1 cut(s) 533
SmiMI CAYNNNNRTG 3 cut(s) 147, 972, 1413
SmlI CTYRAG 4 cut(s) 306, 533, 1159, 1261
SmoI CTYRAG 4 cut(s) 306, 533, 1159, 1261
SphI GCATGC 1 cut(s) 1570
Sse9I AATT 8 cut(s) 188, 362, 399, 559, 759, 857, 879, 950
SseBI AGGCCT 2 cut(s) 158, 589
SsiI CCGC 8 cut(s) 1178, 1273, 1296, 1308, 1432, 1493, 1575, 1686
SspMI CTAG 7 cut(s) 369, 786, 1061, 1202, 1545, 1703, 1714
StuI AGGCCT 2 cut(s) 158, 589
StyD4I CCNGG 2 cut(s) 1467, 1558
StyI CCWWGG 2 cut(s) 219, 1611
TaaI ACNGT 2 cut(s) 1097, 1460
TaiI ACGT 3 cut(s) 272, 682, 1270
TaqI TCGA 6 cut(s) 121, 133, 534, 993, 1035, 1196
TaqII GACCGA 2 cut(s) 1327, 1438
TasI AATT 8 cut(s) 188, 362, 399, 559, 759, 857, 879, 950
TatI WGTACW 1 cut(s) 145
TauI GCSGC 3 cut(s) 1275, 1577, 1689
TfiI GAWTC 2 cut(s) 372, 752
Tru1I TTAA 5 cut(s) 212, 473, 731, 822, 890
Tru9I TTAA 5 cut(s) 212, 473, 731, 822, 890
TscAI CASTG 4 cut(s) 577, 868, 1015, 1111
TspDTI ATGAA 7 cut(s) 42, 165, 182, 375, 385, 456, 517
TspRI CASTG 4 cut(s) 577, 868, 1015, 1111
VpaK11BI GGWCC 3 cut(s) 538, 1181, 1310
VspI ATTAAT 2 cut(s) 473, 731
XapI RAATTY 4 cut(s) 188, 362, 879, 950
XceI RCATGY 3 cut(s) 146, 499, 1570
XcmI CCANNNNNNNNNTGG 1 cut(s) 1289
XhoI CTCGAG 1 cut(s) 533
XmiI GTMKAC 3 cut(s) 289, 1005, 1035
XmnI GAANNNNTTC 1 cut(s) 1319
XspI CTAG 7 cut(s) 369, 786, 1061, 1202, 1545, 1703, 1714
ZraI GACGTC 1 cut(s) 1268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.