MD15G1121700.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000131
Physical Location & Seq
Reverse (-)
8741679 .. 8743776
2098 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1121700.v1.1.491

Sequence Viewer

Length: 1272 bp
ATGGAAGGAATCAATGAAGCTCCAAATGACATAGACAACCCCTATGATCCATTACTCGAGGAGTTGCGTAACTTGTTACCCCTGTCCCCTTTGCGGTGCATCTATAGAGTTCCTGAGCGACTACGGCAGGGAAATGAGAAAGCATACACACCTCAAGTAGTCTCCATAGGCCCACTTCACCATGGCAAGGAACACTTAAAAGCCATGGAAGAGCACAAAAAAAGGTACCTGCGACATTTTCTAAGTCGAACTGGGGTAAGCTTCTTTGATTATATACAAATGATAAAGGAGCAAGAGGGAAGGTTGCGAGGTTTTTATGCAGAATCCATTGAGTTTAGCAGTGATCAATTTGTAAGAATTGTTTTGGTGGATGCTGCCTTCGTCATTGAGTTCTTATTGAGGAACTATTCTGTAAATTTTCGAGGTGAAGATGATTACATTTTTAACAAACCAATGATGAAGCGGGATGTGCGCCCAGACTTGCGGTTGCTTGAAAATCAGCTGCCATTCTTCATTCTTCAGGTTCTTTTCAACACCACTTTTTCTTCTGCAAATCAGCGGCCTTCGTTACTTGAAATTTCCTATTTTTTTATCAAGAGCGCAATCGATAGCAAGGGAAAAGAAGACAGTTTTGACAAAATACGTTCTTCTGGGGTAGAAGTACAACATTTTGTTGATCTGATAAGAACTCTATACCTACCGATGAAATCAAAAGCTATAAAGAAATTTAAAACCACAGCCGCACCCAACATCACAGAGCTACTCCAGGCTGGAGTGAAGTTTGCGGCAGGAACCGGCCACAGCTTATTTGACATAAAATTCTCTGGTGGGATCCTCGAAATTCCGAAGATAACTATAAATGATACCACAAATATGACACTCAGAAATCTCCTTGCTTTTGAACAATGCCATACCAAAGAGGCAAATTACCTAACTAATTATGTTTTCCTCATGAAGCGTCTCGCGAAAACCCCAAAGGATGTGGAATTGCTTGTTGAGTATGGAATTATTGAAAATTGGCTAGGTGATACCAAGAAGATATCTACTTTGCTCCATGACCTTGGCACTAGGGTCATCGTTAGCAACCACTATTATGCCGCTCTTTGTGAAGATCTGAACAACTACTGCAGAACTCCCAGGCACAAATGGATGGCAAATTTGAGACAAAATTATTTTAACTCGCCTTGGTCCATTATTTCTGTTGTTGCAGCTGTTATTCTCCTCATACTCACTTTCATACAAACTGTGTGCTCTATCAAATCTACTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

424

Amino Acids

48.81

Weight (kDa)

8.85

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 34 - 410 2.8e-120 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 237
Acc65I GGTACC 1 cut(s) 225
AccB1I GGYRCC 1 cut(s) 225
AccBSI CCGCTC 1 cut(s) 1100
AccII CGCG 1 cut(s) 965
AciI CCGC 7 cut(s) 94, 463, 484, 559, 741, 785, 1098
AclWI GGATC 3 cut(s) 41, 826, 839
AcoI YGGCCR 1 cut(s) 796
AcsI RAATTY 6 cut(s) 415, 576, 725, 818, 840, 1156
AcuI CTGAAG 1 cut(s) 503
AfaI GTAC 2 cut(s) 227, 663
AfiI CCNNNNNNNGG 2 cut(s) 93, 187
AgsI TTSAA 5 cut(s) 494, 532, 575, 902, 1013
AjnI CCWGG 2 cut(s) 765, 1136
AluBI AGCT 7 cut(s) 20, 261, 502, 716, 760, 804, 1211
AluI AGCT 7 cut(s) 20, 261, 502, 716, 760, 804, 1211
Alw21I GWGCWC 2 cut(s) 216, 1253
Alw26I GTCTC 3 cut(s) 166, 965, 1156
AlwI GGATC 3 cut(s) 41, 826, 839
Ama87I CYCGRG 1 cut(s) 56
AoxI GGCC 3 cut(s) 169, 560, 796
ApeKI GCWGC 3 cut(s) 374, 502, 1208
ApoI RAATTY 6 cut(s) 415, 576, 725, 818, 840, 1156
Asp718I GGTACC 1 cut(s) 225
AspLEI GCGC 2 cut(s) 474, 602
AspS9I GGNCC 2 cut(s) 170, 1188
AsuHPI GGTGA 3 cut(s) 170, 437, 1037
AvaI CYCGRG 1 cut(s) 56
AvaII GGWCC 1 cut(s) 1188
BamHI GGATCC 1 cut(s) 831
BanI GGYRCC 1 cut(s) 225
BbsI GAAGAC 1 cut(s) 630
Bbv12I GWGCWC 2 cut(s) 216, 1253
BbvI GCAGC 3 cut(s) 361, 489, 1220
BccI CCATC 1 cut(s) 1144
BceAI ACGGC 1 cut(s) 140
BciT130I CCWGG 2 cut(s) 767, 1138
BclI TGATCA 1 cut(s) 343
BcoDI GTCTC 3 cut(s) 166, 965, 1156
BfaI CTAG 2 cut(s) 1022, 1068
BfmI CTRYAG 2 cut(s) 103, 1126
BfuAI ACCTGC 1 cut(s) 237
BglII AGATCT 1 cut(s) 1111
BisI GCNGC 7 cut(s) 375, 503, 560, 741, 786, 1098, 1209
BlsI GCNGC 7 cut(s) 376, 504, 561, 742, 787, 1099, 1210
Bme1390I CCNGG 2 cut(s) 767, 1138
Bme18I GGWCC 1 cut(s) 1188
BmeT110I CYCGRG 1 cut(s) 56
BmgT120I GGNCC 2 cut(s) 170, 1188
BmiI GGNNCC 3 cut(s) 227, 793, 833
BmrFI CCNGG 2 cut(s) 767, 1138
BmrI ACTGGG 1 cut(s) 261
BmsI GCATC 2 cut(s) 108, 361
BmuI ACTGGG 1 cut(s) 261
BpiI GAAGAC 1 cut(s) 630
BpmI CTGGAG 2 cut(s) 749, 792
Bpu10I CCTNAGC 1 cut(s) 114
BpuEI CTTGAG 1 cut(s) 138
Bsa29I ATCGAT 1 cut(s) 606
BsaJI CCNNGG 5 cut(s) 181, 204, 1060, 1136, 1184
Bsc4I CCNNNNNNNGG 2 cut(s) 93, 187
Bse118I RCCGGY 1 cut(s) 794
Bse1I ACTGG 1 cut(s) 256
BseBI CCWGG 2 cut(s) 767, 1138
BseCI ATCGAT 1 cut(s) 606
BseDI CCNNGG 5 cut(s) 181, 204, 1060, 1136, 1184
BseGI GGATG 4 cut(s) 376, 472, 985, 1155
BseLI CCNNNNNNNGG 2 cut(s) 93, 187
BseMII CTCAG 2 cut(s) 105, 895
BseNI ACTGG 1 cut(s) 256
BseRI GAGGAG 2 cut(s) 74, 1211
BseXI GCAGC 3 cut(s) 361, 489, 1220
Bsh1236I CGCG 1 cut(s) 965
BshFI GGCC 3 cut(s) 171, 562, 798
BshNI GGYRCC 1 cut(s) 225
BshVI ATCGAT 1 cut(s) 606
BsiHKAI GWGCWC 2 cut(s) 216, 1253
BsiHKCI CYCGRG 1 cut(s) 56
BsiSI CCGG 1 cut(s) 795
BslFI GGGAC 1 cut(s) 70
BslI CCNNNNNNNGG 2 cut(s) 93, 187
BsmAI GTCTC 3 cut(s) 166, 965, 1156
BsmBI CGTCTC 1 cut(s) 965
BsmFI GGGAC 1 cut(s) 70
BsnI GGCC 3 cut(s) 171, 562, 798
BsoBI CYCGRG 1 cut(s) 56
Bsp1286I GDGCHC 2 cut(s) 216, 1253
Bsp143I GATC 5 cut(s) 46, 343, 676, 831, 1111
Bsp19I CCATGG 2 cut(s) 181, 204
Bsp68I TCGCGA 1 cut(s) 965
BspACI CCGC 7 cut(s) 94, 463, 484, 559, 741, 785, 1098
BspANI GGCC 3 cut(s) 171, 562, 798
BspCNI CTCAG 2 cut(s) 106, 894
BspDI ATCGAT 1 cut(s) 606
BspFNI CGCG 1 cut(s) 965
BspHI TCATGA 1 cut(s) 951
BspLI GGNNCC 3 cut(s) 227, 793, 833
BspMAI CTGCAG 1 cut(s) 1130
BspMI ACCTGC 1 cut(s) 237
BspPI GGATC 3 cut(s) 41, 826, 839
BspQI GCTCTTC 1 cut(s) 204
BspT107I GGYRCC 1 cut(s) 225
BsrBI CCGCTC 1 cut(s) 1100
BsrFI RCCGGY 1 cut(s) 794
BsrI ACTGG 1 cut(s) 256
BssAI RCCGGY 1 cut(s) 794
BssECI CCNNGG 5 cut(s) 181, 204, 1060, 1136, 1184
BssMI GATC 5 cut(s) 46, 343, 676, 831, 1111
BssT1I CCWWGG 4 cut(s) 181, 204, 1060, 1184
Bst2UI CCWGG 2 cut(s) 767, 1138
Bst4CI ACNGT 2 cut(s) 629, 1246
Bst6I CTCTTC 1 cut(s) 204
BstDEI CTNAG 3 cut(s) 114, 242, 881
BstDSI CCRYGG 2 cut(s) 181, 204
BstF5I GGATG 4 cut(s) 376, 472, 985, 1155
BstFNI CGCG 1 cut(s) 965
BstHHI GCGC 2 cut(s) 474, 602
BstKTI GATC 5 cut(s) 49, 346, 679, 834, 1114
BstMAI GTCTC 3 cut(s) 166, 965, 1156
BstMBI GATC 5 cut(s) 46, 343, 676, 831, 1111
BstMWI GCNNNNNNNGC 2 cut(s) 124, 469
BstNI CCWGG 2 cut(s) 767, 1138
BstSCI CCNGG 2 cut(s) 765, 1136
BstSFI CTRYAG 2 cut(s) 103, 1126
BstUI CGCG 1 cut(s) 965
BstV1I GCAGC 3 cut(s) 361, 489, 1220
BstV2I GAAGAC 1 cut(s) 630
BstX2I RGATCY 2 cut(s) 831, 1111
BstXI CCANNNNNNTGG 1 cut(s) 1061
BstYI RGATCY 2 cut(s) 831, 1111
Bsu15I ATCGAT 1 cut(s) 606
BsuRI GGCC 3 cut(s) 171, 562, 798
BsuTUI ATCGAT 1 cut(s) 606
BtgI CCRYGG 2 cut(s) 181, 204
BtsCI GGATG 4 cut(s) 376, 472, 985, 1155
BtsI GCAGTG 1 cut(s) 346
BtsIMutI CAGTG 1 cut(s) 346
BtuMI TCGCGA 1 cut(s) 965
BveI ACCTGC 1 cut(s) 237
CciI TCATGA 1 cut(s) 951
CfoI GCGC 2 cut(s) 474, 602
Cfr10I RCCGGY 1 cut(s) 794
Cfr13I GGNCC 2 cut(s) 170, 1188
ClaI ATCGAT 1 cut(s) 606
CseI GACGC 1 cut(s) 947
Csp6I GTAC 2 cut(s) 226, 662
CspCI CAANNNNNGTGG 2 cut(s) 963, 998
CviAII CATG 4 cut(s) 182, 205, 952, 1055
CviQI GTAC 2 cut(s) 226, 662
DdeI CTNAG 3 cut(s) 114, 242, 881
DpnI GATC 5 cut(s) 48, 345, 678, 833, 1113
DpnII GATC 5 cut(s) 46, 343, 676, 831, 1111
DraI TTTAAA 1 cut(s) 730
EaeI YGGCCR 1 cut(s) 796
Eam1104I CTCTTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 204
Eco130I CCWWGG 4 cut(s) 181, 204, 1060, 1184
Eco32I GATATC 1 cut(s) 1041
Eco47I GGWCC 1 cut(s) 1188
Eco57I CTGAAG 1 cut(s) 503
Eco88I CYCGRG 1 cut(s) 56
EcoRII CCWGG 2 cut(s) 765, 1136
EcoRV GATATC 1 cut(s) 1041
EcoT14I CCWWGG 4 cut(s) 181, 204, 1060, 1184
ErhI CCWWGG 4 cut(s) 181, 204, 1060, 1184
Esp3I CGTCTC 1 cut(s) 965
FaeI CATG 4 cut(s) 185, 208, 955, 1058
FalI AAGNNNNNCTT 2 cut(s) 179, 211
FaqI GGGAC 1 cut(s) 70
FatI CATG 4 cut(s) 181, 204, 951, 1054
FauI CCCGC 1 cut(s) 456
FbaI TGATCA 1 cut(s) 343
Fnu4HI GCNGC 7 cut(s) 375, 503, 560, 741, 786, 1098, 1209
FokI GGATG 4 cut(s) 383, 479, 992, 1162
Fsp4HI GCNGC 7 cut(s) 375, 503, 560, 741, 786, 1098, 1209
FspBI CTAG 2 cut(s) 1022, 1068
GlaI GCGC 2 cut(s) 473, 601
GluI GCNGC 7 cut(s) 375, 503, 560, 741, 786, 1098, 1209
GsuI CTGGAG 2 cut(s) 749, 792
HaeIII GGCC 3 cut(s) 171, 562, 798
HapII CCGG 1 cut(s) 795
HgaI GACGC 1 cut(s) 947
HhaI GCGC 2 cut(s) 474, 602
Hin1II CATG 4 cut(s) 185, 208, 955, 1058
Hin6I GCGC 2 cut(s) 472, 600
HinP1I GCGC 2 cut(s) 472, 600
HindIII AAGCTT 1 cut(s) 259
HinfI GANTC 2 cut(s) 9, 323
HpaII CCGG 1 cut(s) 795
HphI GGTGA 3 cut(s) 170, 437, 1037
Hpy188I TCNGA 4 cut(s) 681, 846, 884, 1116
Hpy188III TCNNGA 4 cut(s) 113, 595, 952, 964
HpyAV CCTTC 3 cut(s) 294, 388, 573
HpyCH4III ACNGT 2 cut(s) 629, 1246
HpyCH4IV ACGT 1 cut(s) 643
HpyCH4V TGCA 5 cut(s) 99, 320, 551, 1128, 1208
HpyF10VI GCNNNNNNNGC 2 cut(s) 124, 469
HpyF3I CTNAG 3 cut(s) 114, 242, 881
HpySE526I ACGT 1 cut(s) 643
Hsp92II CATG 4 cut(s) 185, 208, 955, 1058
HspAI GCGC 2 cut(s) 472, 600
KpnI GGTACC 1 cut(s) 229
Ksp22I TGATCA 1 cut(s) 343
Kzo9I GATC 5 cut(s) 46, 343, 676, 831, 1111
LguI GCTCTTC 1 cut(s) 204
LmnI GCTCC 3 cut(s) 25, 289, 1056
Lsp1109I GCAGC 3 cut(s) 361, 489, 1220
LweI GCATC 2 cut(s) 108, 361
MaeI CTAG 2 cut(s) 1022, 1068
MaeII ACGT 1 cut(s) 643
MaeIII GTNAC 3 cut(s) 68, 75, 567
MalI GATC 5 cut(s) 48, 345, 678, 833, 1113
MbiI CCGCTC 1 cut(s) 1100
MboI GATC 5 cut(s) 46, 343, 676, 831, 1111
MflI RGATCY 2 cut(s) 831, 1111
MhlI GDGCHC 2 cut(s) 216, 1253
MseI TTAA 5 cut(s) 197, 444, 729, 1176, 1270
MslI CAYNNNNRTG 2 cut(s) 872, 1092
MspA1I CMGCKG 3 cut(s) 502, 559, 1211
MspI CCGG 1 cut(s) 795
MspR9I CCNGG 2 cut(s) 767, 1138
MvaI CCWGG 2 cut(s) 767, 1138
MvnI CGCG 1 cut(s) 965
MwoI GCNNNNNNNGC 2 cut(s) 124, 469
NcoI CCATGG 2 cut(s) 181, 204
NdeII GATC 5 cut(s) 46, 343, 676, 831, 1111
NlaIII CATG 4 cut(s) 185, 208, 955, 1058
NlaIV GGNNCC 3 cut(s) 227, 793, 833
NruI TCGCGA 1 cut(s) 965
PaeR7I CTCGAG 1 cut(s) 56
PagI TCATGA 1 cut(s) 951
PciSI GCTCTTC 1 cut(s) 204
PfeI GAWTC 2 cut(s) 9, 323
PkrI GCNGC 7 cut(s) 376, 504, 561, 742, 787, 1099, 1210
Psp6I CCWGG 2 cut(s) 765, 1136
PspGI CCWGG 2 cut(s) 765, 1136
PspN4I GGNNCC 3 cut(s) 227, 793, 833
PspPI GGNCC 2 cut(s) 170, 1188
PspXI VCTCGAGB 1 cut(s) 56
PstI CTGCAG 1 cut(s) 1130
PsuI RGATCY 2 cut(s) 831, 1111
PvuII CAGCTG 2 cut(s) 502, 1211
RruI TCGCGA 1 cut(s) 965
RsaI GTAC 2 cut(s) 227, 663
RsaNI GTAC 2 cut(s) 226, 662
RseI CAYNNNNRTG 2 cut(s) 872, 1092
SapI GCTCTTC 1 cut(s) 204
SaqAI TTAA 5 cut(s) 197, 444, 729, 1176, 1270
SatI GCNGC 7 cut(s) 375, 503, 560, 741, 786, 1098, 1209
Sau3AI GATC 5 cut(s) 46, 343, 676, 831, 1111
Sau96I GGNCC 2 cut(s) 170, 1188
ScrFI CCNGG 2 cut(s) 767, 1138
SduI GDGCHC 2 cut(s) 216, 1253
SfaNI GCATC 2 cut(s) 108, 361
SfcI CTRYAG 2 cut(s) 103, 1126
Sfr274I CTCGAG 1 cut(s) 56
SinI GGWCC 1 cut(s) 1188
SlaI CTCGAG 1 cut(s) 56
SmiMI CAYNNNNRTG 2 cut(s) 872, 1092
SmlI CTYRAG 2 cut(s) 56, 153
SmoI CTYRAG 2 cut(s) 56, 153
SsiI CCGC 7 cut(s) 94, 463, 484, 559, 741, 785, 1098
SspMI CTAG 2 cut(s) 1022, 1068
StyD4I CCNGG 2 cut(s) 765, 1136
StyI CCWWGG 4 cut(s) 181, 204, 1060, 1184
TaaI ACNGT 2 cut(s) 629, 1246
TaiI ACGT 1 cut(s) 646
TaqI TCGA 5 cut(s) 57, 247, 421, 606, 837
TatI WGTACW 1 cut(s) 661
TauI GCSGC 4 cut(s) 562, 743, 788, 1100
TfiI GAWTC 2 cut(s) 9, 323
Tru1I TTAA 5 cut(s) 197, 444, 729, 1176, 1270
Tru9I TTAA 5 cut(s) 197, 444, 729, 1176, 1270
TscAI CASTG 1 cut(s) 346
TseI GCWGC 3 cut(s) 374, 502, 1208
TspDTI ATGAA 6 cut(s) 30, 473, 502, 719, 968, 1225
TspRI CASTG 1 cut(s) 346
VpaK11BI GGWCC 1 cut(s) 1188
XapI RAATTY 6 cut(s) 415, 576, 725, 818, 840, 1156
XhoI CTCGAG 1 cut(s) 56
XspI CTAG 2 cut(s) 1022, 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.