Prupe.2G076800_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000199
Physical Location & Seq
Forward (+)
11798848 .. 11803544
4697 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G076800.1

Sequence Viewer

Length: 630 bp
ATGGCTGCCTCTCCCTTAAACTCAAAATCACATATCCATGCTCGCTCTAACAACTTGCCTTCAACATCACACCCTTCTGTTACAGAATTTGAGGAGAACTTGTGCAGATTAAGGGCTTCAGAAACTCTCTTCATCATCATCCTCATCCACAGTCTAAGTAGACTTCGGGATTTGCATGAATGTGTTGAAAATTTTCTCCTTTTGCCACTCACTCAACAAGCCTTGGCACAAGAGTGTGAAGACAAATGGATCAATGAACTACTAGATGGATCCTTGAGGCTCCTGGATGTGTGTGGCATCATTAAGGATGCCCTTTTGCAAACAAAGGAATGCATGCATGAACTTCAATCAATTATGCACAGAAGACGGGAGCTGGGGAAGCCCAAAAGAGTAGCTTGTGAGGGCGAGGAAGTTGCGAATACGAATGAACTTGAGAAGGTAGATGCTGCATTGCAATCCCTTGTTAGTCACAAGTCAAAAAAATATGATAACACAATGCAAGTCGAGGATGTGCAAATTTGGCTCCAGGATTTGGAGGCAAACATTCAAGACATTGAAGAAGGACTTGAGTGCCTGTTCACACACTTAATAAAAACCAGAGTTTCCCTTCTCAACATATTCAGCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

210

Amino Acids

23.89

Weight (kDa)

5.46

Isoelectric Point (pI)

75.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 532
AccI GTMKAC 1 cut(s) 160
AclWI GGATC 3 cut(s) 257, 264, 277
AcsI RAATTY 3 cut(s) 86, 190, 516
AcuI CTGAAG 1 cut(s) 102
AfiI CCNNNNNNNGG 1 cut(s) 532
AgsI TTSAA 5 cut(s) 63, 188, 347, 548, 557
AjnI CCWGG 2 cut(s) 282, 525
AleI CACNNNNGTG 1 cut(s) 232
AluBI AGCT 2 cut(s) 373, 395
AluI AGCT 2 cut(s) 373, 395
AlwI GGATC 3 cut(s) 257, 264, 277
ApeKI GCWGC 2 cut(s) 5, 446
ApoI RAATTY 3 cut(s) 86, 190, 516
Asp700I GAANNNNTTC 1 cut(s) 192
BamHI GGATCC 1 cut(s) 269
BbsI GAAGAC 2 cut(s) 246, 370
BbvI GCAGC 1 cut(s) 433
BccI CCATC 1 cut(s) 260
BcgI CGANNNNNNTGC 2 cut(s) 395, 429
BciT130I CCWGG 2 cut(s) 284, 527
BfaI CTAG 1 cut(s) 263
BisI GCNGC 2 cut(s) 6, 447
BlsI GCNGC 2 cut(s) 7, 448
Bme1390I CCNGG 2 cut(s) 284, 527
BmiI GGNNCC 3 cut(s) 271, 281, 524
BmrFI CCNGG 2 cut(s) 284, 527
BmsI GCATC 3 cut(s) 298, 306, 433
BpiI GAAGAC 2 cut(s) 246, 370
BpmI CTGGAG 1 cut(s) 509
BpuEI CTTGAG 3 cut(s) 295, 452, 587
BsaJI CCNNGG 1 cut(s) 222
BsaXI ACNNNNNCTCC 2 cut(s) 86, 116
Bsc4I CCNNNNNNNGG 1 cut(s) 532
Bse3DI GCAATG 1 cut(s) 449
BseBI CCWGG 2 cut(s) 284, 527
BseDI CCNNGG 1 cut(s) 222
BseGI GGATG 5 cut(s) 138, 144, 292, 313, 514
BseLI CCNNNNNNNGG 1 cut(s) 532
BseMI GCAATG 1 cut(s) 449
BseRI GAGGAG 1 cut(s) 107
BseXI GCAGC 1 cut(s) 433
BseYI CCCAGC 1 cut(s) 373
BsgI GTGCAG 1 cut(s) 124
BslI CCNNNNNNNGG 1 cut(s) 532
BsmI GAATGC 1 cut(s) 335
Bsp143I GATC 2 cut(s) 249, 269
BspLI GGNNCC 3 cut(s) 271, 281, 524
BspPI GGATC 3 cut(s) 257, 264, 277
BsrDI GCAATG 1 cut(s) 449
BssECI CCNNGG 1 cut(s) 222
BssMI GATC 2 cut(s) 249, 269
BssT1I CCWWGG 1 cut(s) 222
Bst2UI CCWGG 2 cut(s) 284, 527
Bst4CI ACNGT 1 cut(s) 152
Bst6I CTCTTC 1 cut(s) 134
BstC8I GCNNGC 2 cut(s) 43, 335
BstDEI CTNAG 1 cut(s) 155
BstF5I GGATG 5 cut(s) 138, 144, 292, 313, 514
BstKTI GATC 2 cut(s) 252, 272
BstMBI GATC 2 cut(s) 249, 269
BstMWI GCNNNNNNNGC 2 cut(s) 379, 520
BstNI CCWGG 2 cut(s) 284, 527
BstNSI RCATGY 1 cut(s) 337
BstSCI CCNGG 2 cut(s) 282, 525
BstV1I GCAGC 1 cut(s) 433
BstV2I GAAGAC 2 cut(s) 246, 370
BstX2I RGATCY 1 cut(s) 269
BstYI RGATCY 1 cut(s) 269
BtsCI GGATG 5 cut(s) 138, 144, 292, 313, 514
Cac8I GCNNGC 2 cut(s) 43, 335
CviAII CATG 4 cut(s) 38, 176, 334, 338
CviJI RGCY 9 cut(s) 5, 116, 221, 280, 373, 382, 395, 523, 624
CviKI_1 RGCY 9 cut(s) 5, 116, 221, 280, 373, 382, 395, 523, 624
DdeI CTNAG 1 cut(s) 155
DpnI GATC 2 cut(s) 251, 271
DpnII GATC 2 cut(s) 249, 269
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
Eco130I CCWWGG 1 cut(s) 222
Eco57I CTGAAG 1 cut(s) 102
EcoRII CCWGG 2 cut(s) 282, 525
EcoT14I CCWWGG 1 cut(s) 222
EcoT22I ATGCAT 2 cut(s) 335, 339
ErhI CCWWGG 1 cut(s) 222
FaeI CATG 4 cut(s) 41, 179, 337, 341
FaiI YATR 8 cut(s) 33, 39, 177, 335, 339, 356, 486, 617
FalI AAGNNNNNCTT 4 cut(s) 379, 411, 549, 581
FatI CATG 4 cut(s) 37, 175, 333, 337
FblI GTMKAC 1 cut(s) 160
Fnu4HI GCNGC 2 cut(s) 6, 447
FokI GGATG 5 cut(s) 125, 131, 299, 320, 521
Fsp4HI GCNGC 2 cut(s) 6, 447
FspBI CTAG 1 cut(s) 263
GluI GCNGC 2 cut(s) 6, 447
GsaI CCCAGC 1 cut(s) 377
GsuI CTGGAG 1 cut(s) 509
Hin1II CATG 4 cut(s) 41, 179, 337, 341
Hpy166II GTNNAC 2 cut(s) 161, 579
Hpy188I TCNGA 1 cut(s) 121
Hpy188III TCNNGA 2 cut(s) 167, 548
Hpy8I GTNNAC 2 cut(s) 161, 579
HpyAV CCTTC 5 cut(s) 69, 84, 430, 554, 617
HpyCH4III ACNGT 1 cut(s) 152
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 520
HpyF3I CTNAG 1 cut(s) 155
Hsp92II CATG 4 cut(s) 41, 179, 337, 341
Kzo9I GATC 2 cut(s) 249, 269
LmnI GCTCC 3 cut(s) 285, 370, 528
LpnPI CCDG 7 cut(s) 269, 296, 359, 512, 539, 587, 610
Lsp1109I GCAGC 1 cut(s) 433
LweI GCATC 3 cut(s) 298, 306, 433
MaeI CTAG 1 cut(s) 263
MaeIII GTNAC 2 cut(s) 79, 467
MalI GATC 2 cut(s) 251, 271
MboI GATC 2 cut(s) 249, 269
MboII GAAGA 4 cut(s) 121, 251, 375, 569
MflI RGATCY 1 cut(s) 269
MluCI AATT 4 cut(s) 86, 190, 351, 516
MnlI CCTC 8 cut(s) 19, 85, 152, 270, 394, 400, 499, 529
Mph1103I ATGCAT 2 cut(s) 335, 339
MroXI GAANNNNTTC 1 cut(s) 192
MseI TTAA 4 cut(s) 17, 110, 303, 587
MslI CAYNNNNRTG 3 cut(s) 36, 180, 232
MspR9I CCNGG 2 cut(s) 284, 527
Mva1269I GAATGC 1 cut(s) 335
MvaI CCWGG 2 cut(s) 284, 527
MwoI GCNNNNNNNGC 2 cut(s) 379, 520
NdeII GATC 2 cut(s) 249, 269
NlaIII CATG 4 cut(s) 41, 179, 337, 341
NlaIV GGNNCC 3 cut(s) 271, 281, 524
NmuCI GTSAC 1 cut(s) 467
NsiI ATGCAT 2 cut(s) 335, 339
NspI RCATGY 1 cut(s) 337
OliI CACNNNNGTG 1 cut(s) 232
PaeI GCATGC 1 cut(s) 337
PctI GAATGC 1 cut(s) 335
PdmI GAANNNNTTC 1 cut(s) 192
PflMI CCANNNNNTGG 1 cut(s) 532
PfoI TCCNGGA 2 cut(s) 282, 525
PkrI GCNGC 2 cut(s) 7, 448
Psp6I CCWGG 2 cut(s) 282, 525
PspFI CCCAGC 1 cut(s) 373
PspGI CCWGG 2 cut(s) 282, 525
PspN4I GGNNCC 3 cut(s) 271, 281, 524
PsuI RGATCY 1 cut(s) 269
RseI CAYNNNNRTG 3 cut(s) 36, 180, 232
SaqAI TTAA 4 cut(s) 17, 110, 303, 587
SatI GCNGC 2 cut(s) 6, 447
Sau3AI GATC 2 cut(s) 249, 269
ScrFI CCNGG 2 cut(s) 284, 527
SetI ASST 3 cut(s) 375, 397, 441
SfaNI GCATC 3 cut(s) 298, 306, 433
SmiMI CAYNNNNRTG 3 cut(s) 36, 180, 232
SmlI CTYRAG 3 cut(s) 274, 431, 566
SmoI CTYRAG 3 cut(s) 274, 431, 566
SphI GCATGC 1 cut(s) 337
Sse9I AATT 4 cut(s) 86, 190, 351, 516
SspMI CTAG 1 cut(s) 263
StyD4I CCNGG 2 cut(s) 282, 525
StyI CCWWGG 1 cut(s) 222
TaaI ACNGT 1 cut(s) 152
TaqI TCGA 1 cut(s) 504
TasI AATT 4 cut(s) 86, 190, 351, 516
Tru1I TTAA 4 cut(s) 17, 110, 303, 587
Tru9I TTAA 4 cut(s) 17, 110, 303, 587
TseFI GTSAC 1 cut(s) 467
TseI GCWGC 2 cut(s) 5, 446
Tsp45I GTSAC 1 cut(s) 467
TspDTI ATGAA 5 cut(s) 121, 192, 270, 354, 441
Van91I CCANNNNNTGG 1 cut(s) 532
XapI RAATTY 3 cut(s) 86, 190, 516
XceI RCATGY 1 cut(s) 337
XmiI GTMKAC 1 cut(s) 160
XmnI GAANNNNTTC 1 cut(s) 192
XspI CTAG 1 cut(s) 263
Zsp2I ATGCAT 2 cut(s) 335, 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.