BEST Arabidopsis thaliana protein match is Arabidopsis protein of
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BPS1 | PF03087 | 2 - 99 | 1.2e-11 | Protein BPS1 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 182 |
| AclI | AACGTT | 1 cut(s) | 439 |
| AcoI | YGGCCR | 1 cut(s) | 392 |
| AcsI | RAATTY | 3 cut(s) | 34, 198, 302 |
| AcuI | CTGAAG | 1 cut(s) | 312 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 79, 182 |
| AgsI | TTSAA | 6 cut(s) | 40, 125, 149, 269, 280, 308 |
| AjnI | CCWGG | 1 cut(s) | 205 |
| AluBI | AGCT | 4 cut(s) | 112, 256, 296, 384 |
| AluI | AGCT | 4 cut(s) | 112, 256, 296, 384 |
| Alw26I | GTCTC | 1 cut(s) | 83 |
| AoxI | GGCC | 2 cut(s) | 173, 392 |
| ApoI | RAATTY | 3 cut(s) | 34, 198, 302 |
| AspS9I | GGNCC | 2 cut(s) | 82, 173 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 195 |
| AvaII | GGWCC | 1 cut(s) | 82 |
| BalI | TGGCCA | 1 cut(s) | 394 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 423, 457 |
| BciT130I | CCWGG | 1 cut(s) | 207 |
| BcoDI | GTCTC | 1 cut(s) | 83 |
| Bme1390I | CCNGG | 1 cut(s) | 207 |
| Bme18I | GGWCC | 1 cut(s) | 82 |
| BmgT120I | GGNCC | 2 cut(s) | 82, 173 |
| BmrFI | CCNGG | 1 cut(s) | 207 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 340, 372 |
| BsaJI | CCNNGG | 2 cut(s) | 206, 324 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 346, 376 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 79, 182 |
| BseBI | CCWGG | 1 cut(s) | 207 |
| BseDI | CCNNGG | 2 cut(s) | 206, 324 |
| BseGI | GGATG | 1 cut(s) | 331 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 79, 182 |
| BseMII | CTCAG | 2 cut(s) | 104, 371 |
| BshFI | GGCC | 2 cut(s) | 175, 394 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 79, 182 |
| BsmAI | GTCTC | 1 cut(s) | 83 |
| BsnI | GGCC | 2 cut(s) | 175, 394 |
| BspANI | GGCC | 2 cut(s) | 175, 394 |
| BspCNI | CTCAG | 2 cut(s) | 105, 370 |
| BssECI | CCNNGG | 2 cut(s) | 206, 324 |
| BssT1I | CCWWGG | 1 cut(s) | 324 |
| Bst2UI | CCWGG | 1 cut(s) | 207 |
| Bst4CI | ACNGT | 1 cut(s) | 142 |
| Bst6I | CTCTTC | 1 cut(s) | 239 |
| BstC8I | GCNNGC | 1 cut(s) | 110 |
| BstDEI | CTNAG | 2 cut(s) | 113, 357 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 77 |
| BstF5I | GGATG | 1 cut(s) | 331 |
| BstMAI | GTCTC | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 381, 413 |
| BstNI | CCWGG | 1 cut(s) | 207 |
| BstSCI | CCNGG | 1 cut(s) | 205 |
| BsuRI | GGCC | 2 cut(s) | 175, 394 |
| BtsCI | GGATG | 1 cut(s) | 331 |
| BtsIMutI | CAGTG | 1 cut(s) | 147 |
| Cac8I | GCNNGC | 1 cut(s) | 110 |
| Cfr13I | GGNCC | 2 cut(s) | 82, 173 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 384, 419 |
| DdeI | CTNAG | 2 cut(s) | 113, 357 |
| EaeI | YGGCCR | 1 cut(s) | 392 |
| Eam1104I | CTCTTC | 1 cut(s) | 239 |
| EarI | CTCTTC | 1 cut(s) | 239 |
| Eco130I | CCWWGG | 1 cut(s) | 324 |
| Eco32I | GATATC | 1 cut(s) | 288 |
| Eco47I | GGWCC | 1 cut(s) | 82 |
| Eco57I | CTGAAG | 1 cut(s) | 312 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 77 |
| EcoRII | CCWGG | 1 cut(s) | 205 |
| EcoRV | GATATC | 1 cut(s) | 288 |
| EcoT14I | CCWWGG | 1 cut(s) | 324 |
| ErhI | CCWWGG | 1 cut(s) | 324 |
| FaiI | YATR | 5 cut(s) | 29, 224, 345, 347, 391 |
| FauNDI | CATATG | 1 cut(s) | 345 |
| FokI | GGATG | 1 cut(s) | 318 |
| HaeIII | GGCC | 2 cut(s) | 175, 394 |
| HindIII | AAGCTT | 1 cut(s) | 294 |
| HinfI | GANTC | 2 cut(s) | 11, 269 |
| HphI | GGTGA | 2 cut(s) | 16, 195 |
| Hpy188I | TCNGA | 2 cut(s) | 292, 301 |
| HpyAV | CCTTC | 3 cut(s) | 34, 172, 244 |
| HpyCH4III | ACNGT | 1 cut(s) | 142 |
| HpyCH4IV | ACGT | 1 cut(s) | 439 |
| HpyCH4V | TGCA | 1 cut(s) | 353 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 381, 413 |
| HpyF3I | CTNAG | 2 cut(s) | 113, 357 |
| HpySE526I | ACGT | 1 cut(s) | 439 |
| LmnI | GCTCC | 2 cut(s) | 253, 326 |
| LpnPI | CCDG | 4 cut(s) | 156, 192, 219, 242 |
| MaeII | ACGT | 1 cut(s) | 439 |
| MaeIII | GTNAC | 2 cut(s) | 12, 130 |
| MboII | GAAGA | 3 cut(s) | 253, 256, 272 |
| MfeI | CAATTG | 1 cut(s) | 396 |
| MlsI | TGGCCA | 1 cut(s) | 394 |
| MluCI | AATT | 6 cut(s) | 34, 61, 198, 280, 302, 396 |
| MluNI | TGGCCA | 1 cut(s) | 394 |
| MlyI | GAGTC | 1 cut(s) | 20 |
| MnlI | CCTC | 5 cut(s) | 83, 210, 240, 372, 406 |
| Mox20I | TGGCCA | 1 cut(s) | 394 |
| MscI | TGGCCA | 1 cut(s) | 394 |
| MslI | CAYNNNNRTG | 1 cut(s) | 348 |
| Msp20I | TGGCCA | 1 cut(s) | 394 |
| MspR9I | CCNGG | 1 cut(s) | 207 |
| MunI | CAATTG | 1 cut(s) | 396 |
| MvaI | CCWGG | 1 cut(s) | 207 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 381, 413 |
| NdeI | CATATG | 1 cut(s) | 345 |
| NmuCI | GTSAC | 2 cut(s) | 12, 130 |
| PfeI | GAWTC | 1 cut(s) | 269 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 182 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| Psp1406I | AACGTT | 1 cut(s) | 439 |
| Psp6I | CCWGG | 1 cut(s) | 205 |
| PspGI | CCWGG | 1 cut(s) | 205 |
| PspPI | GGNCC | 2 cut(s) | 82, 173 |
| RseI | CAYNNNNRTG | 1 cut(s) | 348 |
| Sau96I | GGNCC | 2 cut(s) | 82, 173 |
| SchI | GAGTC | 1 cut(s) | 20 |
| ScrFI | CCNGG | 1 cut(s) | 207 |
| SetI | ASST | 7 cut(s) | 114, 183, 208, 258, 298, 386, 442 |
| SinI | GGWCC | 1 cut(s) | 82 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 348 |
| Sse9I | AATT | 6 cut(s) | 34, 61, 198, 280, 302, 396 |
| SspI | AATATT | 1 cut(s) | 156 |
| StyD4I | CCNGG | 1 cut(s) | 205 |
| StyI | CCWWGG | 1 cut(s) | 324 |
| TaaI | ACNGT | 1 cut(s) | 142 |
| TaiI | ACGT | 1 cut(s) | 442 |
| TaqI | TCGA | 2 cut(s) | 136, 443 |
| TasI | AATT | 6 cut(s) | 34, 61, 198, 280, 302, 396 |
| TfiI | GAWTC | 1 cut(s) | 269 |
| TscAI | CASTG | 1 cut(s) | 147 |
| TseFI | GTSAC | 2 cut(s) | 12, 130 |
| Tsp45I | GTSAC | 2 cut(s) | 12, 130 |
| TspDTI | ATGAA | 1 cut(s) | 154 |
| TspGWI | ACGGA | 1 cut(s) | 325 |
| TspRI | CASTG | 1 cut(s) | 147 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 182 |
| VpaK11BI | GGWCC | 1 cut(s) | 82 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 77 |
| XapI | RAATTY | 3 cut(s) | 34, 198, 302 |