Prupe.8G175000_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000199
Physical Location & Seq
Reverse (-)
17773177 .. 17774043
867 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G175000.1

Sequence Viewer

Length: 867 bp
ATGGCTTTCCACACACGCTCTAACAGCTTCCCCTCAAGGCCACACCCGATCATTCAAGAAGTTGACGAACATTTGTGTAGACTGAGGTCTTCTGAGATCGCCTCCATATCTTCATCATCAATATGCCACAAACTAAGTGGCCTCCAAGACTTGCATGATTGTGTTGATAAGCTGCTTCAGTTGCCTCTCACACAGCAAGCCTTGGCCAAAGAGCAGAATGAGAAATGGACTAATGAGCTATTAGATGGCTCTCTCAGGCTCTTGGATGTTTGCAGCAGCACCAAGGATGCTATCTTGCAAACCAAGGAATGCGTACAGGATCTTCAATCGATCATACGAAGAACACGAGGAGATGAATCTGGAGCACTCACCAGTGAGGTTAGGAAATACTTAACCTCTAGGAAGATGGTGAAAAAGACAATCCAAAAGGCTATGAAGAATCTCAAGGGAATCGAAAACAGATCCATCTTCTCTTCCCCAAACCAGGACAACGAGTCTATTGCCATTGTTAACAAGTTGAGAGAAGTTGAAGCAGTCACTCTTGCAGTGTATGAGTCACTGCTTTCCTTCATCTCTGGACCAAAATCACAGCCAAGCAGCTGGTCATTGGTCTCCAAGATGAAGCACTCCAAAAAAGTTGCTTGTGAGGAAGAAACAGAAGCCAATGAATTTGCACAAGTGGATGCTGCATTGAACTCACTCATTGGACACAAGACAAGCAAAAGTCAAAACAAAAGTGTCGAAAATGCCCAGAACCAGCTCGAGAAGCTGGAGTCATGCATTCAAGACCAAGAAGAAGGAGTTGAGTGCCTATTTAGGCAATTGATCAAAACAAGAGTCTCCCTCCTCAACATCCTTAACCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

289

Amino Acids

32.34

Weight (kDa)

7.6

Isoelectric Point (pI)

60.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 79
AclWI GGATC 2 cut(s) 327, 456
AcoI YGGCCR 1 cut(s) 204
AcsI RAATTY 1 cut(s) 668
AcuI CTGAAG 1 cut(s) 161
AfaI GTAC 1 cut(s) 315
AfiI CCNNNNNNNGG 1 cut(s) 484
AgsI TTSAA 5 cut(s) 56, 326, 530, 694, 785
AhdI GACNNNNNGTC 1 cut(s) 493
AjnI CCWGG 1 cut(s) 483
AluBI AGCT 6 cut(s) 27, 172, 238, 600, 760, 769
AluI AGCT 6 cut(s) 27, 172, 238, 600, 760, 769
Alw21I GWGCWC 1 cut(s) 367
Alw26I GTCTC 2 cut(s) 616, 844
AlwI GGATC 2 cut(s) 327, 456
Ama87I CYCGRG 1 cut(s) 761
AoxI GGCC 3 cut(s) 38, 139, 204
ApeKI GCWGC 5 cut(s) 172, 273, 276, 597, 686
ApoI RAATTY 1 cut(s) 668
ArsI GACNNNNNNTTYG 2 cut(s) 822, 854
AspS9I GGNCC 1 cut(s) 578
AsuHPI GGTGA 2 cut(s) 361, 421
AvaI CYCGRG 1 cut(s) 761
AvaII GGWCC 1 cut(s) 578
BalI TGGCCA 1 cut(s) 206
BarI GAAGNNNNNNTAC 2 cut(s) 306, 338
BauI CACGAG 1 cut(s) 345
BbsI GAAGAC 1 cut(s) 81
Bbv12I GWGCWC 1 cut(s) 367
BbvI GCAGC 5 cut(s) 159, 285, 288, 609, 673
BccI CCATC 3 cut(s) 239, 400, 473
BcgI CGANNNNNNTGC 2 cut(s) 482, 516
BciT130I CCWGG 1 cut(s) 485
BclI TGATCA 1 cut(s) 825
BcoDI GTCTC 2 cut(s) 616, 844
BfaI CTAG 2 cut(s) 399, 865
BisI GCNGC 5 cut(s) 173, 274, 277, 598, 687
BlsI GCNGC 5 cut(s) 174, 275, 278, 599, 688
Bme1390I CCNGG 1 cut(s) 485
Bme18I GGWCC 1 cut(s) 578
BmeRI GACNNNNNGTC 1 cut(s) 493
BmeT110I CYCGRG 1 cut(s) 761
BmgT120I GGNCC 1 cut(s) 578
BmrFI CCNGG 1 cut(s) 485
BmsI GCATC 2 cut(s) 277, 673
BoxI GACNNNNGTC 1 cut(s) 85
BpiI GAAGAC 1 cut(s) 81
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 828, 860
BpmI CTGGAG 2 cut(s) 381, 791
BpuEI CTTGAG 2 cut(s) 19, 428
Bsa29I ATCGAT 1 cut(s) 329
BsaI GGTCTC 1 cut(s) 616
BsaJI CCNNGG 3 cut(s) 201, 282, 303
Bsc4I CCNNNNNNNGG 1 cut(s) 484
Bse1I ACTGG 1 cut(s) 372
BseBI CCWGG 1 cut(s) 485
BseCI ATCGAT 1 cut(s) 329
BseDI CCNNGG 3 cut(s) 201, 282, 303
BseGI GGATG 4 cut(s) 271, 292, 688, 852
BseLI CCNNNNNNNGG 1 cut(s) 484
BseMII CTCAG 3 cut(s) 74, 84, 268
BseNI ACTGG 1 cut(s) 372
BseRI GAGGAG 2 cut(s) 363, 836
BseXI GCAGC 5 cut(s) 159, 285, 288, 609, 673
BshFI GGCC 3 cut(s) 40, 141, 206
BshVI ATCGAT 1 cut(s) 329
BsiHKAI GWGCWC 1 cut(s) 367
BsiHKCI CYCGRG 1 cut(s) 761
BslI CCNNNNNNNGG 1 cut(s) 484
BsmAI GTCTC 2 cut(s) 616, 844
BsmI GAATGC 2 cut(s) 314, 780
BsnI GGCC 3 cut(s) 40, 141, 206
Bso31I GGTCTC 1 cut(s) 616
BsoBI CYCGRG 1 cut(s) 761
Bsp1286I GDGCHC 1 cut(s) 367
Bsp143I GATC 6 cut(s) 48, 96, 319, 330, 461, 825
BspANI GGCC 3 cut(s) 40, 141, 206
BspCNI CTCAG 3 cut(s) 75, 85, 267
BspDI ATCGAT 1 cut(s) 329
BspPI GGATC 2 cut(s) 327, 456
BspTNI GGTCTC 1 cut(s) 616
BsrI ACTGG 1 cut(s) 372
BssECI CCNNGG 3 cut(s) 201, 282, 303
BssMI GATC 6 cut(s) 48, 96, 319, 330, 461, 825
BssSI CACGAG 1 cut(s) 345
BssT1I CCWWGG 3 cut(s) 201, 282, 303
Bst2BI CACGAG 1 cut(s) 345
Bst2UI CCWGG 1 cut(s) 485
Bst6I CTCTTC 1 cut(s) 478
BstC8I GCNNGC 1 cut(s) 198
BstDEI CTNAG 4 cut(s) 83, 93, 134, 254
BstF5I GGATG 4 cut(s) 271, 292, 688, 852
BstKTI GATC 6 cut(s) 51, 99, 322, 333, 464, 828
BstMAI GTCTC 2 cut(s) 616, 844
BstMBI GATC 6 cut(s) 48, 96, 319, 330, 461, 825
BstMWI GCNNNNNNNGC 3 cut(s) 24, 181, 766
BstNI CCWGG 1 cut(s) 485
BstPAI GACNNNNGTC 1 cut(s) 85
BstSCI CCNGG 1 cut(s) 483
BstV1I GCAGC 5 cut(s) 159, 285, 288, 609, 673
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 2 cut(s) 319, 461
BstXI CCANNNNNNTGG 1 cut(s) 600
BstYI RGATCY 2 cut(s) 319, 461
Bsu15I ATCGAT 1 cut(s) 329
BsuRI GGCC 3 cut(s) 40, 141, 206
BsuTUI ATCGAT 1 cut(s) 329
BtsCI GGATG 4 cut(s) 271, 292, 688, 852
BtsI GCAGTG 2 cut(s) 552, 557
BtsIMutI CAGTG 3 cut(s) 379, 552, 557
Cac8I GCNNGC 1 cut(s) 198
Cfr13I GGNCC 1 cut(s) 578
ClaI ATCGAT 1 cut(s) 329
Csp6I GTAC 1 cut(s) 314
CspCI CAANNNNNGTGG 2 cut(s) 118, 153
CviAII CATG 2 cut(s) 155, 777
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 4 cut(s) 83, 93, 134, 254
DpnI GATC 6 cut(s) 50, 98, 321, 332, 463, 827
DpnII GATC 6 cut(s) 48, 96, 319, 330, 461, 825
DriI GACNNNNNGTC 1 cut(s) 493
EaeI YGGCCR 1 cut(s) 204
Eam1104I CTCTTC 1 cut(s) 478
Eam1105I GACNNNNNGTC 1 cut(s) 493
EarI CTCTTC 1 cut(s) 478
Eco130I CCWWGG 3 cut(s) 201, 282, 303
Eco31I GGTCTC 1 cut(s) 616
Eco47I GGWCC 1 cut(s) 578
Eco57I CTGAAG 1 cut(s) 161
Eco88I CYCGRG 1 cut(s) 761
EcoRII CCWGG 1 cut(s) 483
EcoT14I CCWWGG 3 cut(s) 201, 282, 303
EcoT22I ATGCAT 1 cut(s) 782
ErhI CCWWGG 3 cut(s) 201, 282, 303
FaeI CATG 2 cut(s) 158, 780
FaiI YATR 7 cut(s) 107, 124, 156, 335, 434, 552, 778
FatI CATG 2 cut(s) 154, 776
FbaI TGATCA 1 cut(s) 825
FblI GTMKAC 1 cut(s) 79
Fnu4HI GCNGC 5 cut(s) 173, 274, 277, 598, 687
FokI GGATG 4 cut(s) 278, 299, 695, 839
Fsp4HI GCNGC 5 cut(s) 173, 274, 277, 598, 687
FspBI CTAG 2 cut(s) 399, 865
GluI GCNGC 5 cut(s) 173, 274, 277, 598, 687
GsuI CTGGAG 2 cut(s) 381, 791
HaeIII GGCC 3 cut(s) 40, 141, 206
Hin1II CATG 2 cut(s) 158, 780
HincII GTYRAC 2 cut(s) 64, 511
HindII GTYRAC 2 cut(s) 64, 511
HinfI GANTC 7 cut(s) 356, 439, 450, 494, 554, 773, 837
HpaI GTTAAC 1 cut(s) 511
HphI GGTGA 2 cut(s) 361, 421
Hpy166II GTNNAC 3 cut(s) 64, 80, 511
Hpy188I TCNGA 1 cut(s) 94
Hpy188III TCNNGA 5 cut(s) 56, 360, 576, 763, 785
Hpy8I GTNNAC 3 cut(s) 64, 80, 511
HpyAV CCTTC 2 cut(s) 577, 791
HpyCH4V TGCA 7 cut(s) 154, 273, 298, 545, 674, 689, 780
HpyF10VI GCNNNNNNNGC 3 cut(s) 24, 181, 766
HpyF3I CTNAG 4 cut(s) 83, 93, 134, 254
Hsp92II CATG 2 cut(s) 158, 780
Ksp22I TGATCA 1 cut(s) 825
KspAI GTTAAC 1 cut(s) 511
Kzo9I GATC 6 cut(s) 48, 96, 319, 330, 461, 825
LmnI GCTCC 1 cut(s) 362
Lsp1109I GCAGC 5 cut(s) 159, 285, 288, 609, 673
LweI GCATC 2 cut(s) 277, 673
MaeI CTAG 2 cut(s) 399, 865
MaeIII GTNAC 2 cut(s) 535, 555
MalI GATC 6 cut(s) 50, 98, 321, 332, 463, 827
MboI GATC 6 cut(s) 48, 96, 319, 330, 461, 825
MfeI CAATTG 1 cut(s) 821
MflI RGATCY 2 cut(s) 319, 461
MhlI GDGCHC 1 cut(s) 367
MlsI TGGCCA 1 cut(s) 206
MluCI AATT 2 cut(s) 668, 821
MluNI TGGCCA 1 cut(s) 206
MlyI GAGTC 4 cut(s) 503, 563, 782, 846
Mox20I TGGCCA 1 cut(s) 206
Mph1103I ATGCAT 1 cut(s) 782
MscI TGGCCA 1 cut(s) 206
MseI TTAA 3 cut(s) 392, 510, 858
MslI CAYNNNNRTG 2 cut(s) 121, 159
Msp20I TGGCCA 1 cut(s) 206
MspA1I CMGCKG 1 cut(s) 600
MspR9I CCNGG 1 cut(s) 485
MunI CAATTG 1 cut(s) 821
Mva1269I GAATGC 2 cut(s) 314, 780
MvaI CCWGG 1 cut(s) 485
MwoI GCNNNNNNNGC 3 cut(s) 24, 181, 766
NdeII GATC 6 cut(s) 48, 96, 319, 330, 461, 825
NlaIII CATG 2 cut(s) 158, 780
NmuCI GTSAC 2 cut(s) 535, 555
NsiI ATGCAT 1 cut(s) 782
PaeR7I CTCGAG 1 cut(s) 761
PcsI WCGNNNNNNNCGW 1 cut(s) 343
PctI GAATGC 2 cut(s) 314, 780
PfeI GAWTC 3 cut(s) 356, 439, 450
PkrI GCNGC 5 cut(s) 174, 275, 278, 599, 688
PleI GAGTC 4 cut(s) 502, 562, 781, 845
PpsI GAGTC 4 cut(s) 502, 562, 781, 845
PshAI GACNNNNGTC 1 cut(s) 85
Psp6I CCWGG 1 cut(s) 483
PspGI CCWGG 1 cut(s) 483
PspPI GGNCC 1 cut(s) 578
PsuI RGATCY 2 cut(s) 319, 461
PvuII CAGCTG 1 cut(s) 600
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
RseI CAYNNNNRTG 2 cut(s) 121, 159
SaqAI TTAA 3 cut(s) 392, 510, 858
SatI GCNGC 5 cut(s) 173, 274, 277, 598, 687
Sau3AI GATC 6 cut(s) 48, 96, 319, 330, 461, 825
Sau96I GGNCC 1 cut(s) 578
SchI GAGTC 4 cut(s) 503, 563, 782, 846
ScrFI CCNGG 1 cut(s) 485
SduI GDGCHC 1 cut(s) 367
SetI ASST 9 cut(s) 29, 89, 174, 240, 381, 398, 602, 762, 771
SfaNI GCATC 2 cut(s) 277, 673
Sfr274I CTCGAG 1 cut(s) 761
SinI GGWCC 1 cut(s) 578
SlaI CTCGAG 1 cut(s) 761
SmiMI CAYNNNNRTG 2 cut(s) 121, 159
SmlI CTYRAG 3 cut(s) 34, 443, 761
SmoI CTYRAG 3 cut(s) 34, 443, 761
Sse9I AATT 2 cut(s) 668, 821
SspMI CTAG 2 cut(s) 399, 865
StyD4I CCNGG 1 cut(s) 483
StyI CCWWGG 3 cut(s) 201, 282, 303
TaqI TCGA 4 cut(s) 329, 453, 741, 762
TasI AATT 2 cut(s) 668, 821
TfiI GAWTC 3 cut(s) 356, 439, 450
Tru1I TTAA 3 cut(s) 392, 510, 858
Tru9I TTAA 3 cut(s) 392, 510, 858
TscAI CASTG 3 cut(s) 379, 552, 564
TseFI GTSAC 2 cut(s) 535, 555
TseI GCWGC 5 cut(s) 172, 273, 276, 597, 686
Tsp45I GTSAC 2 cut(s) 535, 555
TspDTI ATGAA 6 cut(s) 102, 369, 449, 559, 635, 681
TspRI CASTG 3 cut(s) 379, 552, 564
VpaK11BI GGWCC 1 cut(s) 578
XapI RAATTY 1 cut(s) 668
XcmI CCANNNNNNNNNTGG 1 cut(s) 134
XhoI CTCGAG 1 cut(s) 761
XmiI GTMKAC 1 cut(s) 79
XspI CTAG 2 cut(s) 399, 865
Zsp2I ATGCAT 1 cut(s) 782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.