BEST Arabidopsis thaliana protein match is Arabidopsis protein of
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BPS1 | PF03087 | 35 - 114 | 2.4e-24 | Protein BPS1 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 72 |
| AclWI | GGATC | 1 cut(s) | 51 |
| AcuI | CTGAAG | 1 cut(s) | 59 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 78 |
| AgsI | TTSAA | 3 cut(s) | 105, 211, 272 |
| AluBI | AGCT | 3 cut(s) | 117, 158, 247 |
| AluI | AGCT | 3 cut(s) | 117, 158, 247 |
| Alw26I | GTCTC | 1 cut(s) | 331 |
| AlwI | GGATC | 1 cut(s) | 51 |
| ApeKI | GCWGC | 2 cut(s) | 114, 203 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 309, 341 |
| AspS9I | GGNCC | 1 cut(s) | 82 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| AvaII | GGWCC | 1 cut(s) | 82 |
| BbvI | GCAGC | 2 cut(s) | 126, 190 |
| BccI | CCATC | 1 cut(s) | 130 |
| BclI | TGATCA | 1 cut(s) | 312 |
| BcoDI | GTCTC | 1 cut(s) | 331 |
| BfaI | CTAG | 2 cut(s) | 111, 352 |
| BisI | GCNGC | 2 cut(s) | 115, 204 |
| BlpI | GCTNAGC | 1 cut(s) | 248 |
| BlsI | GCNGC | 2 cut(s) | 116, 205 |
| Bme18I | GGWCC | 1 cut(s) | 82 |
| BmgT120I | GGNCC | 1 cut(s) | 82 |
| BmiI | GGNNCC | 1 cut(s) | 83 |
| BmsI | GCATC | 1 cut(s) | 190 |
| BpmI | CTGGAG | 1 cut(s) | 278 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 248 |
| BpuEI | CTTGAG | 2 cut(s) | 203, 311 |
| BsaI | GGTCTC | 1 cut(s) | 331 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 78 |
| BseGI | GGATG | 3 cut(s) | 68, 205, 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BseXI | GCAGC | 2 cut(s) | 126, 190 |
| BsgI | GTGCAG | 2 cut(s) | 161, 246 |
| BslFI | GGGAC | 1 cut(s) | 95 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BsmAI | GTCTC | 1 cut(s) | 331 |
| BsmFI | GGGAC | 1 cut(s) | 95 |
| Bso31I | GGTCTC | 1 cut(s) | 331 |
| Bsp143I | GATC | 3 cut(s) | 56, 63, 312 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 248 |
| BspACI | CCGC | 1 cut(s) | 72 |
| BspLI | GGNNCC | 1 cut(s) | 83 |
| BspPI | GGATC | 1 cut(s) | 51 |
| BspTNI | GGTCTC | 1 cut(s) | 331 |
| BssMI | GATC | 3 cut(s) | 56, 63, 312 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 233 |
| BstDEI | CTNAG | 1 cut(s) | 248 |
| BstF5I | GGATG | 3 cut(s) | 68, 205, 339 |
| BstKTI | GATC | 3 cut(s) | 59, 66, 315 |
| BstMAI | GTCTC | 1 cut(s) | 331 |
| BstMBI | GATC | 3 cut(s) | 56, 63, 312 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 233 |
| BstV1I | GCAGC | 2 cut(s) | 126, 190 |
| BstX2I | RGATCY | 1 cut(s) | 56 |
| BstYI | RGATCY | 1 cut(s) | 56 |
| BtsCI | GGATG | 3 cut(s) | 68, 205, 339 |
| Cfr13I | GGNCC | 1 cut(s) | 82 |
| CviJI | RGCY | 6 cut(s) | 26, 109, 117, 158, 247, 297 |
| CviKI_1 | RGCY | 6 cut(s) | 26, 109, 117, 158, 247, 297 |
| DdeI | CTNAG | 1 cut(s) | 248 |
| DpnI | GATC | 3 cut(s) | 58, 65, 314 |
| DpnII | GATC | 3 cut(s) | 56, 63, 312 |
| EciI | GGCGGA | 1 cut(s) | 61 |
| Eco31I | GGTCTC | 1 cut(s) | 331 |
| Eco47I | GGWCC | 1 cut(s) | 82 |
| Eco57I | CTGAAG | 1 cut(s) | 59 |
| FaiI | YATR | 2 cut(s) | 29, 267 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 142, 174, 273, 305 |
| FaqI | GGGAC | 1 cut(s) | 95 |
| FbaI | TGATCA | 1 cut(s) | 312 |
| Fnu4HI | GCNGC | 2 cut(s) | 115, 204 |
| FokI | GGATG | 3 cut(s) | 55, 212, 326 |
| Fsp4HI | GCNGC | 2 cut(s) | 115, 204 |
| FspBI | CTAG | 2 cut(s) | 111, 352 |
| GluI | GCNGC | 2 cut(s) | 115, 204 |
| GsuI | CTGGAG | 1 cut(s) | 278 |
| HinfI | GANTC | 1 cut(s) | 260 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 39 |
| Hpy188III | TCNNGA | 3 cut(s) | 220, 257, 272 |
| HpyAV | CCTTC | 3 cut(s) | 34, 278, 341 |
| HpyCH4V | TGCA | 5 cut(s) | 142, 191, 206, 227, 236 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 233 |
| HpyF3I | CTNAG | 1 cut(s) | 248 |
| Ksp22I | TGATCA | 1 cut(s) | 312 |
| Kzo9I | GATC | 3 cut(s) | 56, 63, 312 |
| LpnPI | CCDG | 4 cut(s) | 64, 103, 242, 257 |
| Lsp1109I | GCAGC | 2 cut(s) | 126, 190 |
| LweI | GCATC | 1 cut(s) | 190 |
| MaeI | CTAG | 2 cut(s) | 111, 352 |
| MaeIII | GTNAC | 1 cut(s) | 213 |
| MalI | GATC | 3 cut(s) | 58, 65, 314 |
| MboI | GATC | 3 cut(s) | 56, 63, 312 |
| MboII | GAAGA | 2 cut(s) | 19, 293 |
| MfeI | CAATTG | 1 cut(s) | 308 |
| MflI | RGATCY | 1 cut(s) | 56 |
| MluCI | AATT | 2 cut(s) | 15, 308 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| MnlI | CCTC | 2 cut(s) | 160, 187 |
| MspA1I | CMGCKG | 1 cut(s) | 117 |
| MunI | CAATTG | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 233 |
| NdeII | GATC | 3 cut(s) | 56, 63, 312 |
| NlaIV | GGNNCC | 1 cut(s) | 83 |
| NmuCI | GTSAC | 1 cut(s) | 213 |
| PkrI | GCNGC | 2 cut(s) | 116, 205 |
| PleI | GAGTC | 1 cut(s) | 268 |
| PpsI | GAGTC | 1 cut(s) | 268 |
| PspN4I | GGNNCC | 1 cut(s) | 83 |
| PspPI | GGNCC | 1 cut(s) | 82 |
| PsuI | RGATCY | 1 cut(s) | 56 |
| PvuII | CAGCTG | 1 cut(s) | 117 |
| SatI | GCNGC | 2 cut(s) | 115, 204 |
| Sau3AI | GATC | 3 cut(s) | 56, 63, 312 |
| Sau96I | GGNCC | 1 cut(s) | 82 |
| SchI | GAGTC | 1 cut(s) | 269 |
| SetI | ASST | 4 cut(s) | 119, 160, 198, 249 |
| SfaNI | GCATC | 1 cut(s) | 190 |
| SinI | GGWCC | 1 cut(s) | 82 |
| SmlI | CTYRAG | 2 cut(s) | 218, 290 |
| SmoI | CTYRAG | 2 cut(s) | 218, 290 |
| Sse9I | AATT | 2 cut(s) | 15, 308 |
| SsiI | CCGC | 1 cut(s) | 72 |
| SspMI | CTAG | 2 cut(s) | 111, 352 |
| TasI | AATT | 2 cut(s) | 15, 308 |
| TseFI | GTSAC | 1 cut(s) | 213 |
| TseI | GCWGC | 2 cut(s) | 114, 203 |
| Tsp45I | GTSAC | 1 cut(s) | 213 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| VpaK11BI | GGWCC | 1 cut(s) | 82 |
| XspI | CTAG | 2 cut(s) | 111, 352 |