Rorug06G0128900

BEST Arabidopsis thaliana protein match is Arabidopsis protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000199
Physical Location & Seq
Forward (+)
17889778 .. 17895594
5817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0128900.1

Sequence Viewer

Length: 1698 bp
ATGGATGCAGCAAAGAAATGGGGTTTCGCTGTTACCTTGATATTCATCATGTTTGCAGTATTGCGTCTGACTCTTCTGGTCCTCAGAGATCCTAATGAATCTTGGAAACTTATGGACACAGTCCTAGGCGTATTAGGAATAGTTGACTCAGAGGAGTCTTCAGGAGGCTACAAGATTGATAAAGAGGACCTTTCAGTAAGTCTCAACTTAACAAGTTGTCACTCATCTTATGGAAGGCCAGATCTTCTTGTCTATTGTTGTCCTCCAAGAAGTATAGCAGAAGAACCCGTCATTGATTTTCAATTTCCAGATCCTTCAACCCCTCTAAGAATTCGGAGGCCAGCACACCGTGTTGGTCGTGGCTTCATTGCCAAGTACAAAAAGGCTCTCTTGATCATGAAGTCACTTCCCTACAGTGACCCTCGGAGTTTTCGTCGTCAAGCTGATATGCATTGCATCTTCTGCACTGGTGCTTATGACCAGCCACATTCCCACCGCCCTCTCGACATCCATCGGAAATGGTTCTTTTTCCCATGGCACCGGATGCTGCTTCACTTCCACGAACGCATCGTCGGAAGCCTAATTGGTGATGACACATTTGCTCTGCCATTTTGGAATTGGGACTCCCCTGATGGAATGGCAATGCCTGAATGGTACATGCATTCACCTTTTTCCGACAATCAGCGGGACGTTTCTCACTTTCCACCAAAAGTTAGTGATTTAAACTACGATTACGAGAAGACCGATGAGAATATGGAAAACAAAGAGCGGATGCACTTGAACATGGTGTTCATGTATAACCAGATGGTGTCTGGAGCAAAGAAGCCAGAGCTGTTCATGGGGTGCCCTTATAAGAATAGTGAGGAGGGTGCTTGTGATGGCCCTGGTACAATAGAGAATGCTCCTCACAACACAATGCATACATGGGTTGGTAGCAATTTCAATGTCAGGAGGGAAGACATGGGAGCATTTTATTCTGCAGCTAGGGACCCTAGTTTCTATGCACACCACTCGAACTTGGACCGACTTTGGGAGGTTTGGAAGCAAATTCACAAGGTCGACTTGCAAACATTTGATCCTGATTGGCTCAACTCTAGTTTCTATTTCCATGATGAAAATTCACAGCTTGTGAGAATCAAAGTTCGTGATGTTTTGGATACTAAAAAGCTGAGGTATGTTTATGAGGAGGTTGATCTTCCATGGCTGAATACGCGTCCAAAGCCCAACTCTATTCCATCCAAAATTTCCAACCATGCACTGAAAATAAGAGAAAACAGAACCATTTTGTCTGCAGAATTAGGACCAGGTGGTCGGAATCTTGAGAGCTCCATAACAGTGAAGGTGGGCAGGTCTAAATTTAACAGAAGAAAGCAAGAGAAAGATGAGGAGGAAGAGATTTTGGTTGTTCATGGAATTGCTGTGAGAATTGATGAGTATGTTAAGTTTGATGTGTATATAAATGTAGTCGATGAGAGCAAAATCGAGCCGGGTTTCAGGGAATTTGCCGGAACCTTTGTTCACATACCTCATGGAAAGATGGATGATGACAGAAAGACCAATCTGAAGTTTGGTATTTCAGAAGTGCTTGAGGATTTGGAGGCAGATAGAGATGAGAGCATTTGGGTGACATTGCTACCCATGACGAAGTCATGCACTAACACAACAATTGATGGGATTCGGATTGAATACATGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

565

Amino Acids

65.64

Weight (kDa)

6.14

Isoelectric Point (pI)

49.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tyrosinase PF00264 142 - 349 1.5e-30 Common central domain of tyrosinase
PPO1_DWL PF12142 359 - 407 1.6e-25 Polyphenol oxidase middle domain
PPO1_KFDV PF12143 439 - 563 1.6e-37 Chloroplastic Polyphenol Oxidase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 852
AasI GACNNNNNNGTC 1 cut(s) 1308
Acc36I ACCTGC 1 cut(s) 1338
AccB1I GGYRCC 2 cut(s) 537, 843
AccBSI CCGCTC 1 cut(s) 769
AccI GTMKAC 1 cut(s) 1059
AccII CGCG 1 cut(s) 1213
AciI CCGC 3 cut(s) 496, 685, 769
AclWI GGATC 3 cut(s) 83, 305, 1070
AcsI RAATTY 6 cut(s) 330, 1047, 1117, 1242, 1355, 1499
AcuI CTGAAG 2 cut(s) 144, 1583
AdeI CACNNNGTG 1 cut(s) 350
AfaI GTAC 3 cut(s) 377, 656, 889
AfiI CCNNNNNNNGG 1 cut(s) 1030
AflIII ACRYGT 1 cut(s) 1211
AgsI TTSAA 5 cut(s) 302, 318, 781, 943, 1685
AjnI CCWGG 2 cut(s) 883, 1303
AloI GAACNNNNNNTCC 2 cut(s) 1500, 1532
AluBI AGCT 6 cut(s) 443, 832, 983, 1126, 1168, 1326
AluI AGCT 6 cut(s) 443, 832, 983, 1126, 1168, 1326
Alw21I GWGCWC 1 cut(s) 1328
Alw26I GTCTC 1 cut(s) 206
AlwI GGATC 3 cut(s) 83, 305, 1070
AoxI GGCC 3 cut(s) 236, 338, 880
ApeKI GCWGC 3 cut(s) 8, 547, 980
ApoI RAATTY 6 cut(s) 330, 1047, 1117, 1242, 1355, 1499
ArsI GACNNNNNNTTYG 2 cut(s) 555, 587
Asp700I GAANNNNTTC 1 cut(s) 521
AspA2I CCTAGG 1 cut(s) 124
AspS9I GGNCC 6 cut(s) 79, 187, 881, 988, 1021, 1301
AsuC2I CCSGG 1 cut(s) 1488
AsuHPI GGTGA 3 cut(s) 599, 657, 1636
AvaII GGWCC 5 cut(s) 79, 187, 988, 1021, 1301
AvrII CCTAGG 1 cut(s) 124
BaeGI GKGCMC 1 cut(s) 848
BanI GGYRCC 2 cut(s) 537, 843
BanII GRGCYC 1 cut(s) 1328
BbsI GAAGAC 3 cut(s) 150, 746, 963
Bbv12I GWGCWC 1 cut(s) 1328
BbvCI CCTCAGC 1 cut(s) 1169
BbvI GCAGC 3 cut(s) 20, 534, 992
BccI CCATC 7 cut(s) 519, 626, 799, 872, 1243, 1531, 1664
BcgI CGANNNNNNTGC 2 cut(s) 993, 1027
BciT130I CCWGG 2 cut(s) 885, 1305
BciVI GTATCC 1 cut(s) 1150
BclI TGATCA 1 cut(s) 393
BcnI CCSGG 1 cut(s) 1488
BcoDI GTCTC 1 cut(s) 206
BfaI CTAG 4 cut(s) 125, 984, 993, 1095
BfmI CTRYAG 3 cut(s) 412, 978, 1290
BfuAI ACCTGC 1 cut(s) 1338
BfuI GTATCC 1 cut(s) 1150
BglII AGATCT 1 cut(s) 241
BisI GCNGC 3 cut(s) 9, 548, 981
BlnI CCTAGG 1 cut(s) 124
BlsI GCNGC 3 cut(s) 10, 549, 982
Bme1390I CCNGG 3 cut(s) 885, 1305, 1488
Bme18I GGWCC 5 cut(s) 79, 187, 988, 1021, 1301
BmgT120I GGNCC 6 cut(s) 79, 187, 881, 988, 1021, 1301
BmiI GGNNCC 5 cut(s) 539, 845, 989, 990, 1510
BmrFI CCNGG 3 cut(s) 885, 1305, 1488
BmsI GCATC 4 cut(s) 465, 534, 576, 762
BpiI GAAGAC 3 cut(s) 150, 746, 963
BpmI CTGGAG 1 cut(s) 834
Bpu10I CCTNAGC 1 cut(s) 1169
BpuEI CTTGAG 2 cut(s) 1340, 1607
BpuMI CCSGG 1 cut(s) 1488
BsaBI GATNNNNATC 1 cut(s) 44
BsaJI CCNNGG 5 cut(s) 124, 422, 533, 883, 1199
BsaWI WCCGGW 1 cut(s) 540
BsaXI ACNNNNNCTCC 2 cut(s) 418, 448
Bsc4I CCNNNNNNNGG 1 cut(s) 1030
Bse1I ACTGG 1 cut(s) 472
Bse3DI GCAATG 4 cut(s) 366, 451, 648, 1628
Bse8I GATNNNNATC 1 cut(s) 44
BseBI CCWGG 2 cut(s) 885, 1305
BseDI CCNNGG 5 cut(s) 124, 422, 533, 883, 1199
BseGI GGATG 6 cut(s) 10, 507, 549, 777, 1235, 1546
BseJI GATNNNNATC 1 cut(s) 44
BseLI CCNNNNNNNGG 1 cut(s) 1030
BseMI GCAATG 4 cut(s) 366, 451, 648, 1628
BseMII CTCAG 3 cut(s) 97, 162, 1160
BseNI ACTGG 1 cut(s) 472
BseRI GAGGAG 5 cut(s) 167, 878, 894, 1199, 1400
BseSI GKGCMC 1 cut(s) 848
BseXI GCAGC 3 cut(s) 20, 534, 992
BsgI GTGCAG 1 cut(s) 448
Bsh1236I CGCG 1 cut(s) 1213
BshFI GGCC 3 cut(s) 238, 340, 882
BshNI GGYRCC 2 cut(s) 537, 843
BsiHKAI GWGCWC 1 cut(s) 1328
BsiSI CCGG 3 cut(s) 541, 1487, 1506
BslFI GGGAC 3 cut(s) 635, 701, 1001
BslI CCNNNNNNNGG 1 cut(s) 1030
BsmAI GTCTC 1 cut(s) 206
BsmFI GGGAC 3 cut(s) 635, 701, 1001
BsmI GAATGC 2 cut(s) 661, 904
BsnI GGCC 3 cut(s) 238, 340, 882
Bsp1286I GDGCHC 2 cut(s) 848, 1328
Bsp143I GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
Bsp19I CCATGG 2 cut(s) 533, 1199
BspACI CCGC 3 cut(s) 496, 685, 769
BspANI GGCC 3 cut(s) 238, 340, 882
BspCNI CTCAG 3 cut(s) 96, 161, 1161
BspFNI CGCG 1 cut(s) 1213
BspHI TCATGA 1 cut(s) 396
BspLI GGNNCC 5 cut(s) 539, 845, 989, 990, 1510
BspMAI CTGCAG 2 cut(s) 982, 1294
BspMI ACCTGC 1 cut(s) 1338
BspPI GGATC 3 cut(s) 83, 305, 1070
BspT107I GGYRCC 2 cut(s) 537, 843
BsrBI CCGCTC 1 cut(s) 769
BsrDI GCAATG 4 cut(s) 366, 451, 648, 1628
BsrI ACTGG 1 cut(s) 472
BssECI CCNNGG 5 cut(s) 124, 422, 533, 883, 1199
BssMI GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
BssT1I CCWWGG 3 cut(s) 124, 533, 1199
Bst2UI CCWGG 2 cut(s) 885, 1305
Bst4CI ACNGT 4 cut(s) 121, 350, 416, 1336
Bst6I CTCTTC 2 cut(s) 78, 1386
BstAPI GCANNNNNTGC 2 cut(s) 462, 544
BstC8I GCNNGC 1 cut(s) 342
BstDEI CTNAG 4 cut(s) 83, 148, 326, 1169
BstDSI CCRYGG 2 cut(s) 533, 1199
BstF5I GGATG 6 cut(s) 10, 507, 549, 777, 1235, 1546
BstFNI CGCG 1 cut(s) 1213
BstKTI GATC 6 cut(s) 91, 244, 313, 396, 1078, 1195
BstMAI GTCTC 1 cut(s) 206
BstMBI GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
BstMWI GCNNNNNNNGC 4 cut(s) 462, 544, 1210, 1219
BstNI CCWGG 2 cut(s) 885, 1305
BstNSI RCATGY 1 cut(s) 661
BstSCI CCNGG 3 cut(s) 883, 1303, 1486
BstSFI CTRYAG 3 cut(s) 412, 978, 1290
BstSLI GKGCMC 1 cut(s) 848
BstUI CGCG 1 cut(s) 1213
BstV1I GCAGC 3 cut(s) 20, 534, 992
BstV2I GAAGAC 3 cut(s) 150, 746, 963
BstX2I RGATCY 3 cut(s) 88, 241, 310
BstYI RGATCY 3 cut(s) 88, 241, 310
BsuI GTATCC 1 cut(s) 1150
BsuRI GGCC 3 cut(s) 238, 340, 882
BtgI CCRYGG 2 cut(s) 533, 1199
BtsCI GGATG 6 cut(s) 10, 507, 549, 777, 1235, 1546
BtsIMutI CAGTG 4 cut(s) 421, 465, 1256, 1341
BveI ACCTGC 1 cut(s) 1338
Cac8I GCNNGC 1 cut(s) 342
CciI TCATGA 1 cut(s) 396
Cfr13I GGNCC 6 cut(s) 79, 187, 881, 988, 1021, 1301
CseI GACGC 2 cut(s) 53, 1202
CsiI ACCWGGT 1 cut(s) 1303
Csp6I GTAC 3 cut(s) 376, 655, 888
CviQI GTAC 3 cut(s) 376, 655, 888
DdeI CTNAG 4 cut(s) 83, 148, 326, 1169
DpnI GATC 6 cut(s) 90, 243, 312, 395, 1077, 1194
DpnII GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
DraI TTTAAA 1 cut(s) 723
DraIII CACNNNGTG 1 cut(s) 350
DrdI GACNNNNNNGTC 1 cut(s) 1308
DseDI GACNNNNNNGTC 1 cut(s) 1308
Eam1104I CTCTTC 2 cut(s) 78, 1386
EarI CTCTTC 2 cut(s) 78, 1386
Ecl136II GAGCTC 1 cut(s) 1326
Eco130I CCWWGG 3 cut(s) 124, 533, 1199
Eco24I GRGCYC 1 cut(s) 1328
Eco47I GGWCC 5 cut(s) 79, 187, 988, 1021, 1301
Eco53kI GAGCTC 1 cut(s) 1326
Eco57I CTGAAG 2 cut(s) 144, 1583
EcoICRI GAGCTC 1 cut(s) 1326
EcoO109I RGGNCCY 2 cut(s) 187, 988
EcoRI GAATTC 1 cut(s) 330
EcoRII CCWGG 2 cut(s) 883, 1303
EcoT14I CCWWGG 3 cut(s) 124, 533, 1199
EcoT22I ATGCAT 3 cut(s) 453, 663, 921
EcoT38I GRGCYC 1 cut(s) 1328
ErhI CCWWGG 3 cut(s) 124, 533, 1199
FalI AAGNNNNNCTT 6 cut(s) 174, 206, 374, 406, 1046, 1078
FaqI GGGAC 3 cut(s) 635, 701, 1001
FauI CCCGC 1 cut(s) 678
FbaI TGATCA 1 cut(s) 393
FblI GTMKAC 1 cut(s) 1059
Fnu4HI GCNGC 3 cut(s) 9, 548, 981
FokI GGATG 6 cut(s) 17, 494, 556, 784, 1222, 1553
FriOI GRGCYC 1 cut(s) 1328
Fsp4HI GCNGC 3 cut(s) 9, 548, 981
FspBI CTAG 4 cut(s) 125, 984, 993, 1095
GluI GCNGC 3 cut(s) 9, 548, 981
GsuI CTGGAG 1 cut(s) 834
HaeIII GGCC 3 cut(s) 238, 340, 882
HapII CCGG 3 cut(s) 541, 1487, 1506
HgaI GACGC 2 cut(s) 53, 1202
HincII GTYRAC 2 cut(s) 145, 1060
HindII GTYRAC 2 cut(s) 145, 1060
HinfI GANTC 8 cut(s) 70, 98, 146, 155, 623, 1134, 1315, 1675
HpaII CCGG 3 cut(s) 541, 1487, 1506
HphI GGTGA 3 cut(s) 599, 657, 1636
Hpy166II GTNNAC 3 cut(s) 145, 1060, 1519
Hpy8I GTNNAC 3 cut(s) 145, 1060, 1519
Hpy99I CGWCG 2 cut(s) 438, 575
HpyAV CCTTC 3 cut(s) 228, 324, 1333
HpyCH4III ACNGT 4 cut(s) 121, 350, 416, 1336
HpyCH4IV ACGT 1 cut(s) 690
HpyF10VI GCNNNNNNNGC 4 cut(s) 462, 544, 1210, 1219
HpyF3I CTNAG 4 cut(s) 83, 148, 326, 1169
HpySE526I ACGT 1 cut(s) 690
KflI GGGWCCC 1 cut(s) 988
Ksp22I TGATCA 1 cut(s) 393
Kzo9I GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
LmnI GCTCC 4 cut(s) 815, 907, 965, 1331
Lsp1109I GCAGC 3 cut(s) 20, 534, 992
LweI GCATC 4 cut(s) 465, 534, 576, 762
MabI ACCWGGT 1 cut(s) 1303
MaeI CTAG 4 cut(s) 125, 984, 993, 1095
MaeII ACGT 1 cut(s) 690
MaeIII GTNAC 5 cut(s) 31, 218, 402, 416, 1624
MalI GATC 6 cut(s) 90, 243, 312, 395, 1077, 1194
MbiI CCGCTC 1 cut(s) 769
MboI GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
MfeI CAATTG 1 cut(s) 1665
MflI RGATCY 3 cut(s) 88, 241, 310
MhlI GDGCHC 2 cut(s) 848, 1328
MluI ACGCGT 1 cut(s) 1211
MlyI GAGTC 4 cut(s) 64, 140, 164, 617
MmeI TCCRAC 4 cut(s) 553, 699, 1272, 1292
Mph1103I ATGCAT 3 cut(s) 453, 663, 921
MroXI GAANNNNTTC 1 cut(s) 521
MseI TTAA 4 cut(s) 209, 722, 1359, 1440
MslI CAYNNNNRTG 2 cut(s) 1334, 1622
MspA1I CMGCKG 1 cut(s) 685
MspI CCGG 3 cut(s) 541, 1487, 1506
MspR9I CCNGG 3 cut(s) 885, 1305, 1488
MunI CAATTG 1 cut(s) 1665
Mva1269I GAATGC 2 cut(s) 661, 904
MvaI CCWGG 2 cut(s) 885, 1305
MvnI CGCG 1 cut(s) 1213
MwoI GCNNNNNNNGC 4 cut(s) 462, 544, 1210, 1219
NciI CCSGG 1 cut(s) 1488
NcoI CCATGG 2 cut(s) 533, 1199
NdeII GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
NlaIV GGNNCC 5 cut(s) 539, 845, 989, 990, 1510
NmuCI GTSAC 4 cut(s) 218, 402, 416, 1624
NsiI ATGCAT 3 cut(s) 453, 663, 921
NspI RCATGY 1 cut(s) 661
PagI TCATGA 1 cut(s) 396
PcsI WCGNNNNNNNCGW 3 cut(s) 430, 567, 741
PctI GAATGC 2 cut(s) 661, 904
PdmI GAANNNNTTC 1 cut(s) 521
PfeI GAWTC 4 cut(s) 98, 1134, 1315, 1675
PflFI GACNNNGTC 2 cut(s) 119, 1645
PkrI GCNGC 3 cut(s) 10, 549, 982
PleI GAGTC 4 cut(s) 64, 140, 163, 617
PpsI GAGTC 4 cut(s) 64, 140, 163, 617
PpuMI RGGWCCY 2 cut(s) 187, 988
PsiI TTATAA 1 cut(s) 852
Psp124BI GAGCTC 1 cut(s) 1328
Psp5II RGGWCCY 2 cut(s) 187, 988
Psp6I CCWGG 2 cut(s) 883, 1303
PspGI CCWGG 2 cut(s) 883, 1303
PspN4I GGNNCC 5 cut(s) 539, 845, 989, 990, 1510
PspPI GGNCC 6 cut(s) 79, 187, 881, 988, 1021, 1301
PspPPI RGGWCCY 2 cut(s) 187, 988
PstI CTGCAG 2 cut(s) 982, 1294
PsuI RGATCY 3 cut(s) 88, 241, 310
PsyI GACNNNGTC 2 cut(s) 119, 1645
RsaI GTAC 3 cut(s) 377, 656, 889
RsaNI GTAC 3 cut(s) 376, 655, 888
RseI CAYNNNNRTG 2 cut(s) 1334, 1622
SacI GAGCTC 1 cut(s) 1328
SalI GTCGAC 1 cut(s) 1058
SaqAI TTAA 4 cut(s) 209, 722, 1359, 1440
SatI GCNGC 3 cut(s) 9, 548, 981
Sau3AI GATC 6 cut(s) 88, 241, 310, 393, 1075, 1192
Sau96I GGNCC 6 cut(s) 79, 187, 881, 988, 1021, 1301
SchI GAGTC 4 cut(s) 64, 140, 164, 617
ScrFI CCNGG 3 cut(s) 885, 1305, 1488
SduI GDGCHC 2 cut(s) 848, 1328
SexAI ACCWGGT 1 cut(s) 1303
SfaNI GCATC 4 cut(s) 465, 534, 576, 762
SfcI CTRYAG 3 cut(s) 412, 978, 1290
SinI GGWCC 5 cut(s) 79, 187, 988, 1021, 1301
SmiMI CAYNNNNRTG 2 cut(s) 1334, 1622
SmlI CTYRAG 2 cut(s) 1319, 1586
SmoI CTYRAG 2 cut(s) 1319, 1586
SsiI CCGC 3 cut(s) 496, 685, 769
SspMI CTAG 4 cut(s) 125, 984, 993, 1095
SstI GAGCTC 1 cut(s) 1328
StyD4I CCNGG 3 cut(s) 883, 1303, 1486
StyI CCWWGG 3 cut(s) 124, 533, 1199
TaaI ACNGT 4 cut(s) 121, 350, 416, 1336
TaiI ACGT 1 cut(s) 693
TaqI TCGA 5 cut(s) 504, 1013, 1059, 1467, 1482
TaqII GACCGA 2 cut(s) 758, 1038
TatI WGTACW 1 cut(s) 375
TfiI GAWTC 4 cut(s) 98, 1134, 1315, 1675
Tru1I TTAA 4 cut(s) 209, 722, 1359, 1440
Tru9I TTAA 4 cut(s) 209, 722, 1359, 1440
TscAI CASTG 4 cut(s) 421, 472, 1263, 1341
TseFI GTSAC 4 cut(s) 218, 402, 416, 1624
TseI GCWGC 3 cut(s) 8, 547, 980
Tsp45I GTSAC 4 cut(s) 218, 402, 416, 1624
TspDTI ATGAA 8 cut(s) 34, 111, 355, 413, 781, 826, 1128, 1397
TspRI CASTG 4 cut(s) 421, 472, 1263, 1341
Tth111I GACNNNGTC 2 cut(s) 119, 1645
VpaK11BI GGWCC 5 cut(s) 79, 187, 988, 1021, 1301
XapI RAATTY 6 cut(s) 330, 1047, 1117, 1242, 1355, 1499
XceI RCATGY 1 cut(s) 661
XcmI CCANNNNNNNNNTGG 2 cut(s) 615, 809
XmaJI CCTAGG 1 cut(s) 124
XmiI GTMKAC 1 cut(s) 1059
XmnI GAANNNNTTC 1 cut(s) 521
XspI CTAG 4 cut(s) 125, 984, 993, 1095
Zsp2I ATGCAT 3 cut(s) 453, 663, 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.