Prupe.8G175900_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000199
Physical Location & Seq
Forward (+)
17815630 .. 17816484
855 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G175900.1

Sequence Viewer

Length: 855 bp
ATGGCTTTCCACACTCGCTCTAACAGCTTCCCTTCAAGGCCACACCCAATCGTTCAAGAAGTTGACGAATGTTTGTGTAGGCTGAGGTCTTCTGAGGCCACCTCCACATCTTCATCATCAATAAGCCACAAACTAAGCGGTCTCCAAGATTTGCATGATTGTGTTGACAGGTTGCTTCAGTTGCCTCTCACTCAACAAGCCTTGGCACAAGAGCAGAATGAGAAATGGGCTAATGAGCTATTAGATAGCTCTCTCAGACTCTTGGATGTTTGCAGCAGCGCCAAGGATGCTATCTTGCAAACCAAGGAATGTGTACAAGATCTTCAATCAATCATACGAAGAACACGAGGAGGTGAATCTGCAGCACTCACCAGTGAGGTCAGGAAATACTTAACCTCCAGGAAGACGGTGAAAAAGGCAATCCAAAAGGCTATGAAGAATCTTAAGGGATCCAATTTCTCATCCCTCAACAAGGACAATGAGTCAATTGACATTGTTAACAAGTTGAGAGAAGTTGAAGCAGTCACTCTTGCAGTGTTTGAGTCACTTCTTTCTTTCATCTGTGGGCCAAAATCACAGCCAAGCAGCTGGTCCTTGGTCTCCAAGATGATGCCCTCAAAAAAAGTTGCCTGTGAAGAAGAAACAGAAGCAAATGAATTTGCACAAGTGGATGCTGCATTGAACTCTCTCATTGGACACAAGACAAGCAAATCTCAAAACAAAATTGTCGATAATGCGCAGAACCAGCTCGAGCAGCTGGAGTCATGCTTTCAAGGCCAAGAAGAAGGAGTTGAGTGCGTATTTAGGCAAATTATCAAAACAAGAGTCTCCCTCCTCAACATCCTAAACCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

285

Amino Acids

31.64

Weight (kDa)

7.0

Isoelectric Point (pI)

60.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 738
AciI CCGC 1 cut(s) 138
AclWI GGATC 2 cut(s) 444, 457
AcsI RAATTY 1 cut(s) 656
AcuI CTGAAG 1 cut(s) 161
AfaI GTAC 1 cut(s) 315
AfiI CCNNNNNNNGG 1 cut(s) 472
AflII CTTAAG 1 cut(s) 443
AgsI TTSAA 6 cut(s) 36, 56, 326, 518, 682, 773
AhdI GACNNNNNGTC 1 cut(s) 481
AjnI CCWGG 1 cut(s) 398
AluBI AGCT 6 cut(s) 27, 238, 249, 588, 748, 757
AluI AGCT 6 cut(s) 27, 238, 249, 588, 748, 757
Alw26I GTCTC 3 cut(s) 146, 604, 832
AlwI GGATC 2 cut(s) 444, 457
Ama87I CYCGRG 1 cut(s) 749
AoxI GGCC 4 cut(s) 38, 96, 566, 775
ApeKI GCWGC 6 cut(s) 273, 276, 362, 585, 674, 754
ApoI RAATTY 1 cut(s) 656
ArsI GACNNNNNNTTYG 2 cut(s) 810, 842
AspLEI GCGC 2 cut(s) 281, 739
AspS9I GGNCC 2 cut(s) 566, 591
AsuHPI GGTGA 3 cut(s) 361, 365, 421
AvaI CYCGRG 1 cut(s) 749
AvaII GGWCC 1 cut(s) 591
BamHI GGATCC 1 cut(s) 449
BarI GAAGNNNNNNTAC 2 cut(s) 306, 338
BauI CACGAG 1 cut(s) 345
BbsI GAAGAC 2 cut(s) 81, 410
BbvCI CCTCAGC 1 cut(s) 83
BbvI GCAGC 6 cut(s) 285, 288, 374, 597, 661, 766
BciT130I CCWGG 1 cut(s) 400
BcoDI GTCTC 3 cut(s) 146, 604, 832
BfaI CTAG 1 cut(s) 853
BfmI CTRYAG 1 cut(s) 360
BfoI RGCGCY 1 cut(s) 282
BfrI CTTAAG 1 cut(s) 443
BglII AGATCT 1 cut(s) 319
BisI GCNGC 6 cut(s) 274, 277, 363, 586, 675, 755
BlsI GCNGC 6 cut(s) 275, 278, 364, 587, 676, 756
Bme1390I CCNGG 1 cut(s) 400
Bme18I GGWCC 1 cut(s) 591
BmeRI GACNNNNNGTC 1 cut(s) 481
BmeT110I CYCGRG 1 cut(s) 749
BmgT120I GGNCC 2 cut(s) 566, 591
BmiI GGNNCC 1 cut(s) 451
BmrFI CCNGG 1 cut(s) 400
BmsI GCATC 3 cut(s) 277, 600, 661
BpiI GAAGAC 2 cut(s) 81, 410
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 816, 848
BpmI CTGGAG 2 cut(s) 382, 779
Bpu10I CCTNAGC 1 cut(s) 83
BsaI GGTCTC 2 cut(s) 146, 604
BsaJI CCNNGG 4 cut(s) 201, 282, 303, 594
BsaXI ACNNNNNCTCC 2 cut(s) 380, 410
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse1I ACTGG 1 cut(s) 372
BseBI CCWGG 1 cut(s) 400
BseDI CCNNGG 4 cut(s) 201, 282, 303, 594
BseGI GGATG 5 cut(s) 271, 292, 461, 676, 840
BseLI CCNNNNNNNGG 1 cut(s) 472
BseMII CTCAG 3 cut(s) 74, 84, 268
BseNI ACTGG 1 cut(s) 372
BseRI GAGGAG 2 cut(s) 363, 824
BseXI GCAGC 6 cut(s) 285, 288, 374, 597, 661, 766
BshFI GGCC 4 cut(s) 40, 98, 568, 777
BsiHKCI CYCGRG 1 cut(s) 749
BslI CCNNNNNNNGG 1 cut(s) 472
BsmAI GTCTC 3 cut(s) 146, 604, 832
BsnI GGCC 4 cut(s) 40, 98, 568, 777
Bso31I GGTCTC 2 cut(s) 146, 604
BsoBI CYCGRG 1 cut(s) 749
Bsp1407I TGTACA 1 cut(s) 313
Bsp143I GATC 2 cut(s) 319, 449
BspACI CCGC 1 cut(s) 138
BspANI GGCC 4 cut(s) 40, 98, 568, 777
BspCNI CTCAG 3 cut(s) 75, 85, 267
BspLI GGNNCC 1 cut(s) 451
BspMAI CTGCAG 1 cut(s) 364
BspPI GGATC 2 cut(s) 444, 457
BspTI CTTAAG 1 cut(s) 443
BspTNI GGTCTC 2 cut(s) 146, 604
BsrGI TGTACA 1 cut(s) 313
BsrI ACTGG 1 cut(s) 372
BssECI CCNNGG 4 cut(s) 201, 282, 303, 594
BssMI GATC 2 cut(s) 319, 449
BssSI CACGAG 1 cut(s) 345
BssT1I CCWWGG 4 cut(s) 201, 282, 303, 594
Bst2BI CACGAG 1 cut(s) 345
Bst2UI CCWGG 1 cut(s) 400
Bst4CI ACNGT 1 cut(s) 409
BstAFI CTTAAG 1 cut(s) 443
BstAUI TGTACA 1 cut(s) 313
BstDEI CTNAG 4 cut(s) 83, 93, 134, 254
BstENI CCTNNNNNAGG 1 cut(s) 470
BstF5I GGATG 5 cut(s) 271, 292, 461, 676, 840
BstH2I RGCGCY 1 cut(s) 282
BstHHI GCGC 2 cut(s) 281, 739
BstKTI GATC 2 cut(s) 322, 452
BstMAI GTCTC 3 cut(s) 146, 604, 832
BstMBI GATC 2 cut(s) 319, 449
BstMWI GCNNNNNNNGC 6 cut(s) 24, 181, 287, 745, 754, 774
BstNI CCWGG 1 cut(s) 400
BstSCI CCNGG 1 cut(s) 398
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 6 cut(s) 285, 288, 374, 597, 661, 766
BstV2I GAAGAC 2 cut(s) 81, 410
BstX2I RGATCY 2 cut(s) 319, 449
BstXI CCANNNNNNTGG 1 cut(s) 588
BstYI RGATCY 2 cut(s) 319, 449
BsuRI GGCC 4 cut(s) 40, 98, 568, 777
BtsCI GGATG 5 cut(s) 271, 292, 461, 676, 840
BtsI GCAGTG 1 cut(s) 540
BtsIMutI CAGTG 2 cut(s) 379, 540
CfoI GCGC 2 cut(s) 281, 739
Cfr13I GGNCC 2 cut(s) 566, 591
Csp6I GTAC 1 cut(s) 314
CviAII CATG 2 cut(s) 155, 765
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 4 cut(s) 83, 93, 134, 254
DpnI GATC 2 cut(s) 321, 451
DpnII GATC 2 cut(s) 319, 449
DriI GACNNNNNGTC 1 cut(s) 481
Eam1105I GACNNNNNGTC 1 cut(s) 481
Eco130I CCWWGG 4 cut(s) 201, 282, 303, 594
Eco31I GGTCTC 2 cut(s) 146, 604
Eco47I GGWCC 1 cut(s) 591
Eco57I CTGAAG 1 cut(s) 161
Eco88I CYCGRG 1 cut(s) 749
EcoNI CCTNNNNNAGG 1 cut(s) 470
EcoRII CCWGG 1 cut(s) 398
EcoT14I CCWWGG 4 cut(s) 201, 282, 303, 594
ErhI CCWWGG 4 cut(s) 201, 282, 303, 594
FaeI CATG 2 cut(s) 158, 768
FaiI YATR 4 cut(s) 156, 335, 434, 766
FatI CATG 2 cut(s) 154, 764
Fnu4HI GCNGC 6 cut(s) 274, 277, 363, 586, 675, 755
FokI GGATG 5 cut(s) 278, 299, 448, 683, 827
Fsp4HI GCNGC 6 cut(s) 274, 277, 363, 586, 675, 755
FspBI CTAG 1 cut(s) 853
FspI TGCGCA 1 cut(s) 738
GlaI GCGC 2 cut(s) 280, 738
GluI GCNGC 6 cut(s) 274, 277, 363, 586, 675, 755
GsuI CTGGAG 2 cut(s) 382, 779
HaeII RGCGCY 1 cut(s) 282
HaeIII GGCC 4 cut(s) 40, 98, 568, 777
HhaI GCGC 2 cut(s) 281, 739
Hin1II CATG 2 cut(s) 158, 768
Hin6I GCGC 2 cut(s) 279, 737
HinP1I GCGC 2 cut(s) 279, 737
HincII GTYRAC 3 cut(s) 64, 166, 499
HindII GTYRAC 3 cut(s) 64, 166, 499
HinfI GANTC 7 cut(s) 258, 356, 439, 482, 542, 761, 825
HpaI GTTAAC 1 cut(s) 499
HphI GGTGA 3 cut(s) 361, 365, 421
Hpy166II GTNNAC 4 cut(s) 64, 166, 314, 499
Hpy188I TCNGA 2 cut(s) 94, 257
Hpy188III TCNNGA 2 cut(s) 56, 382
Hpy8I GTNNAC 4 cut(s) 64, 166, 314, 499
HpyAV CCTTC 2 cut(s) 42, 779
HpyCH4III ACNGT 1 cut(s) 409
HpyCH4V TGCA 7 cut(s) 154, 273, 298, 362, 533, 662, 677
HpyF10VI GCNNNNNNNGC 6 cut(s) 24, 181, 287, 745, 754, 774
HpyF3I CTNAG 4 cut(s) 83, 93, 134, 254
Hsp92II CATG 2 cut(s) 158, 768
HspAI GCGC 2 cut(s) 279, 737
KspAI GTTAAC 1 cut(s) 499
Kzo9I GATC 2 cut(s) 319, 449
LpnPI CCDG 9 cut(s) 154, 367, 385, 385, 412, 574, 643, 743, 758
Lsp1109I GCAGC 6 cut(s) 285, 288, 374, 597, 661, 766
LweI GCATC 3 cut(s) 277, 600, 661
MaeI CTAG 1 cut(s) 853
MaeIII GTNAC 2 cut(s) 523, 543
MalI GATC 2 cut(s) 321, 451
MboI GATC 2 cut(s) 319, 449
MboII GAAGA 9 cut(s) 81, 102, 314, 351, 415, 448, 647, 650, 794
MfeI CAATTG 1 cut(s) 486
MflI RGATCY 2 cut(s) 319, 449
MluCI AATT 5 cut(s) 454, 486, 656, 723, 810
MlyI GAGTC 5 cut(s) 252, 491, 551, 770, 834
MseI TTAA 3 cut(s) 392, 444, 498
MslI CAYNNNNRTG 1 cut(s) 159
MspA1I CMGCKG 2 cut(s) 588, 757
MspCI CTTAAG 1 cut(s) 443
MspR9I CCNGG 1 cut(s) 400
MunI CAATTG 1 cut(s) 486
MvaI CCWGG 1 cut(s) 400
MwoI GCNNNNNNNGC 6 cut(s) 24, 181, 287, 745, 754, 774
NdeII GATC 2 cut(s) 319, 449
NlaIII CATG 2 cut(s) 158, 768
NlaIV GGNNCC 1 cut(s) 451
NmuCI GTSAC 2 cut(s) 523, 543
NsbI TGCGCA 1 cut(s) 738
PaeR7I CTCGAG 1 cut(s) 749
PcsI WCGNNNNNNNCGW 1 cut(s) 343
PfeI GAWTC 2 cut(s) 356, 439
PfoI TCCNGGA 1 cut(s) 398
PkrI GCNGC 6 cut(s) 275, 278, 364, 587, 676, 756
PleI GAGTC 5 cut(s) 252, 490, 550, 769, 833
PpsI GAGTC 5 cut(s) 252, 490, 550, 769, 833
Psp6I CCWGG 1 cut(s) 398
PspGI CCWGG 1 cut(s) 398
PspN4I GGNNCC 1 cut(s) 451
PspPI GGNCC 2 cut(s) 566, 591
PspXI VCTCGAGB 1 cut(s) 749
PstI CTGCAG 1 cut(s) 364
PsuI RGATCY 2 cut(s) 319, 449
PvuII CAGCTG 2 cut(s) 588, 757
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
RseI CAYNNNNRTG 1 cut(s) 159
SaqAI TTAA 3 cut(s) 392, 444, 498
SatI GCNGC 6 cut(s) 274, 277, 363, 586, 675, 755
Sau3AI GATC 2 cut(s) 319, 449
Sau96I GGNCC 2 cut(s) 566, 591
SchI GAGTC 5 cut(s) 252, 491, 551, 770, 834
ScrFI CCNGG 1 cut(s) 400
SfaNI GCATC 3 cut(s) 277, 600, 661
SfcI CTRYAG 1 cut(s) 360
Sfr274I CTCGAG 1 cut(s) 749
SinI GGWCC 1 cut(s) 591
SlaI CTCGAG 1 cut(s) 749
SmiMI CAYNNNNRTG 1 cut(s) 159
SmlI CTYRAG 2 cut(s) 443, 749
SmoI CTYRAG 2 cut(s) 443, 749
Sse9I AATT 5 cut(s) 454, 486, 656, 723, 810
SsiI CCGC 1 cut(s) 138
SspMI CTAG 1 cut(s) 853
StyD4I CCNGG 1 cut(s) 398
StyI CCWWGG 4 cut(s) 201, 282, 303, 594
TaaI ACNGT 1 cut(s) 409
TaqI TCGA 2 cut(s) 729, 750
TasI AATT 5 cut(s) 454, 486, 656, 723, 810
TatI WGTACW 1 cut(s) 313
TfiI GAWTC 2 cut(s) 356, 439
Tru1I TTAA 3 cut(s) 392, 444, 498
Tru9I TTAA 3 cut(s) 392, 444, 498
TscAI CASTG 2 cut(s) 379, 540
TseFI GTSAC 2 cut(s) 523, 543
TseI GCWGC 6 cut(s) 273, 276, 362, 585, 674, 754
Tsp45I GTSAC 2 cut(s) 523, 543
TspDTI ATGAA 4 cut(s) 102, 449, 547, 669
TspRI CASTG 2 cut(s) 379, 540
Vha464I CTTAAG 1 cut(s) 443
VpaK11BI GGWCC 1 cut(s) 591
XagI CCTNNNNNAGG 1 cut(s) 470
XapI RAATTY 1 cut(s) 656
XhoI CTCGAG 1 cut(s) 749
XspI CTAG 1 cut(s) 853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.