Prupe.8G175700_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000199
Physical Location & Seq
Forward (+)
17810406 .. 17811248
843 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G175700.1

Sequence Viewer

Length: 843 bp
ATGGCTTTCCATACTCGCTCTAACAGCTTCCCTTCAAGGCCACACCCGATCGTTCAAGAAGTCGATGGACATTTGTGTAGATTGAGGTCTTCTGAGGTCACCTCCGCATCATCATCATCAATCAGCCACAAACTAACTGGCCTTCAAGAATTGCATAGTTGTGTTGATAGGTTGCTTCAGTTGCCCCTCACTCAACAAGCCTTGGCCCAAGAGCTGAATGAGAAATCTACTAATGAGCTATTAGATGGCTCTCTGAGGATCTTGGATGTTTGCAGCAGTGCCAAGGATGCCCTGTTGCAAACCAAGGAATGCGTGCAGGACCTTCAATCAATCATGCGAAGAAGGCGGGGAAGTGAATCCGGAGCACTCACAACTGAGGTCAGGAAATACTTGACCTCTAGGAAGATGGTGAAGAAGGCAATCCACAAGGCTATGGGAAATCTCAAGGGATCCAGTTTCTCATCCCTTAACAAGGACAATGAGACTATTGCCGTTGTTAGCACGTTGAGAGCTGTCGAGGCAGTCACTCTCTCAGTGTTCGAATCACTCCTGTCCTTCATCTCTGGCCCAAAGTCAAAGCCAAGCAGCAGCTGGTCATTGGTTTCCAAGATTATTCACACCAAAAGAGTAGCTTGTGAGGAAGAAACAGAAGCAAATGAATTTGCACAAGTGGATGCTGCTCTGCAATCATTCATTAAGACAAGCAAATCTGACCACAAAAATGCAGACAACCAGCTCGACAATCTGGAGTCATGCATTCAAGATCAGGAAGAACAACTTGAGTGCCTTTTTAGGCAGTTTATCAAAACAAGAGTCTCCCTCCTCAACATCTTAAACCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

281

Amino Acids

31.16

Weight (kDa)

8.14

Isoelectric Point (pI)

63.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 359
AciI CCGC 2 cut(s) 105, 346
AclWI GGATC 3 cut(s) 266, 444, 457
AcsI RAATTY 1 cut(s) 659
AcuI CTGAAG 1 cut(s) 161
AfiI CCNNNNNNNGG 1 cut(s) 472
AgsI TTSAA 5 cut(s) 36, 56, 146, 326, 761
AluBI AGCT 7 cut(s) 27, 214, 238, 512, 591, 632, 736
AluI AGCT 7 cut(s) 27, 214, 238, 512, 591, 632, 736
Alw21I GWGCWC 1 cut(s) 367
Alw26I GTCTC 2 cut(s) 476, 820
AlwI GGATC 3 cut(s) 266, 444, 457
AlwNI CAGNNNCTG 1 cut(s) 591
Aor13HI TCCGGA 1 cut(s) 359
AoxI GGCC 4 cut(s) 38, 139, 204, 565
ApeKI GCWGC 4 cut(s) 273, 585, 588, 677
ApoI RAATTY 1 cut(s) 659
ArsI GACNNNNNNTTYG 2 cut(s) 798, 830
AspS9I GGNCC 3 cut(s) 205, 319, 566
AsuHPI GGTGA 2 cut(s) 91, 421
AsuII TTCGAA 1 cut(s) 540
AvaII GGWCC 1 cut(s) 319
BamHI GGATCC 1 cut(s) 449
BbsI GAAGAC 1 cut(s) 81
Bbv12I GWGCWC 1 cut(s) 367
BbvI GCAGC 4 cut(s) 285, 597, 600, 664
BccI CCATC 3 cut(s) 59, 239, 400
BceAI ACGGC 1 cut(s) 476
BcoDI GTCTC 2 cut(s) 476, 820
BfaI CTAG 2 cut(s) 399, 841
BisI GCNGC 4 cut(s) 274, 586, 589, 678
BlsI GCNGC 4 cut(s) 275, 587, 590, 679
Bme18I GGWCC 1 cut(s) 319
BmgT120I GGNCC 3 cut(s) 205, 319, 566
BmiI GGNNCC 1 cut(s) 451
BmsI GCATC 3 cut(s) 116, 277, 664
BpiI GAAGAC 1 cut(s) 81
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 804, 836
BpmI CTGGAG 1 cut(s) 767
Bpu14I TTCGAA 1 cut(s) 540
BpuEI CTTGAG 2 cut(s) 428, 800
BsaJI CCNNGG 3 cut(s) 201, 282, 303
BsaWI WCCGGW 1 cut(s) 359
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse1I ACTGG 2 cut(s) 142, 453
BseAI TCCGGA 1 cut(s) 359
BseDI CCNNGG 3 cut(s) 201, 282, 303
BseGI GGATG 4 cut(s) 271, 292, 461, 679
BseLI CCNNNNNNNGG 1 cut(s) 472
BseMII CTCAG 4 cut(s) 84, 245, 366, 546
BseNI ACTGG 2 cut(s) 142, 453
BseRI GAGGAG 1 cut(s) 812
BseXI GCAGC 4 cut(s) 285, 597, 600, 664
BsgI GTGCAG 1 cut(s) 335
Bsh1285I CGRYCG 1 cut(s) 51
BshFI GGCC 4 cut(s) 40, 141, 206, 567
BsiEI CGRYCG 1 cut(s) 51
BsiHKAI GWGCWC 1 cut(s) 367
BsiSI CCGG 1 cut(s) 360
BslI CCNNNNNNNGG 1 cut(s) 472
BsmAI GTCTC 2 cut(s) 476, 820
BsmI GAATGC 2 cut(s) 314, 756
BsnI GGCC 4 cut(s) 40, 141, 206, 567
Bsp119I TTCGAA 1 cut(s) 540
Bsp1286I GDGCHC 1 cut(s) 367
Bsp13I TCCGGA 1 cut(s) 359
Bsp143I GATC 4 cut(s) 48, 258, 449, 763
BspACI CCGC 2 cut(s) 105, 346
BspANI GGCC 4 cut(s) 40, 141, 206, 567
BspCNI CTCAG 4 cut(s) 85, 246, 367, 545
BspEI TCCGGA 1 cut(s) 359
BspLI GGNNCC 1 cut(s) 451
BspPI GGATC 3 cut(s) 266, 444, 457
BspT104I TTCGAA 1 cut(s) 540
BsrI ACTGG 2 cut(s) 142, 453
BssECI CCNNGG 3 cut(s) 201, 282, 303
BssMI GATC 4 cut(s) 48, 258, 449, 763
BssT1I CCWWGG 3 cut(s) 201, 282, 303
BstBI TTCGAA 1 cut(s) 540
BstC8I GCNNGC 1 cut(s) 314
BstDEI CTNAG 4 cut(s) 93, 254, 375, 532
BstEII GGTNACC 1 cut(s) 97
BstENI CCTNNNNNAGG 1 cut(s) 470
BstF5I GGATG 4 cut(s) 271, 292, 461, 679
BstKTI GATC 4 cut(s) 51, 261, 452, 766
BstMAI GTCTC 2 cut(s) 476, 820
BstMBI GATC 4 cut(s) 48, 258, 449, 763
BstMCI CGRYCG 1 cut(s) 51
BstMWI GCNNNNNNNGC 5 cut(s) 24, 181, 287, 343, 518
BstPI GGTNACC 1 cut(s) 97
BstV1I GCAGC 4 cut(s) 285, 597, 600, 664
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 2 cut(s) 258, 449
BstYI RGATCY 2 cut(s) 258, 449
BsuRI GGCC 4 cut(s) 40, 141, 206, 567
BtsCI GGATG 4 cut(s) 271, 292, 461, 679
BtsI GCAGTG 1 cut(s) 283
BtsIMutI CAGTG 2 cut(s) 283, 540
Cac8I GCNNGC 1 cut(s) 314
CaiI CAGNNNCTG 1 cut(s) 591
Cfr13I GGNCC 3 cut(s) 205, 319, 566
CviAII CATG 2 cut(s) 334, 753
DdeI CTNAG 4 cut(s) 93, 254, 375, 532
DpnI GATC 4 cut(s) 50, 260, 451, 765
DpnII GATC 4 cut(s) 48, 258, 449, 763
Eco130I CCWWGG 3 cut(s) 201, 282, 303
Eco47I GGWCC 1 cut(s) 319
Eco57I CTGAAG 1 cut(s) 161
Eco91I GGTNACC 1 cut(s) 97
EcoNI CCTNNNNNAGG 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 319
EcoO65I GGTNACC 1 cut(s) 97
EcoT14I CCWWGG 3 cut(s) 201, 282, 303
EcoT22I ATGCAT 1 cut(s) 758
ErhI CCWWGG 3 cut(s) 201, 282, 303
FaeI CATG 2 cut(s) 337, 756
FaiI YATR 5 cut(s) 12, 156, 335, 434, 754
FalI AAGNNNNNCTT 4 cut(s) 616, 648, 762, 794
FatI CATG 2 cut(s) 333, 752
FauI CCCGC 1 cut(s) 339
Fnu4HI GCNGC 4 cut(s) 274, 586, 589, 678
FokI GGATG 4 cut(s) 278, 299, 448, 686
Fsp4HI GCNGC 4 cut(s) 274, 586, 589, 678
FspBI CTAG 2 cut(s) 399, 841
GluI GCNGC 4 cut(s) 274, 586, 589, 678
GsuI CTGGAG 1 cut(s) 767
HaeIII GGCC 4 cut(s) 40, 141, 206, 567
HapII CCGG 1 cut(s) 360
Hin1II CATG 2 cut(s) 337, 756
HinfI GANTC 4 cut(s) 356, 542, 749, 813
HpaII CCGG 1 cut(s) 360
HphI GGTGA 2 cut(s) 91, 421
Hpy188I TCNGA 3 cut(s) 94, 255, 712
Hpy188III TCNNGA 7 cut(s) 56, 146, 360, 382, 746, 761, 767
HpyAV CCTTC 6 cut(s) 42, 152, 332, 336, 409, 565
HpyCH4IV ACGT 1 cut(s) 503
HpyCH4V TGCA 8 cut(s) 154, 273, 298, 316, 665, 685, 725, 756
HpyF10VI GCNNNNNNNGC 5 cut(s) 24, 181, 287, 343, 518
HpyF3I CTNAG 4 cut(s) 93, 254, 375, 532
HpySE526I ACGT 1 cut(s) 503
Hsp92II CATG 2 cut(s) 337, 756
Kpn2I TCCGGA 1 cut(s) 359
Kzo9I GATC 4 cut(s) 48, 258, 449, 763
LmnI GCTCC 1 cut(s) 362
Lsp1109I GCAGC 4 cut(s) 285, 597, 600, 664
LweI GCATC 3 cut(s) 116, 277, 664
MaeI CTAG 2 cut(s) 399, 841
MaeII ACGT 1 cut(s) 503
MaeIII GTNAC 2 cut(s) 97, 523
MalI GATC 4 cut(s) 50, 260, 451, 765
MboI GATC 4 cut(s) 48, 258, 449, 763
MboII GAAGA 6 cut(s) 81, 351, 415, 424, 653, 782
MflI RGATCY 2 cut(s) 258, 449
MhlI GDGCHC 1 cut(s) 367
MluCI AATT 2 cut(s) 149, 659
MlyI GAGTC 2 cut(s) 758, 822
Mph1103I ATGCAT 1 cut(s) 758
MroI TCCGGA 1 cut(s) 359
MseI TTAA 3 cut(s) 468, 696, 833
MslI CAYNNNNRTG 2 cut(s) 159, 720
MspA1I CMGCKG 1 cut(s) 591
MspI CCGG 1 cut(s) 360
Mva1269I GAATGC 2 cut(s) 314, 756
MwoI GCNNNNNNNGC 5 cut(s) 24, 181, 287, 343, 518
NdeII GATC 4 cut(s) 48, 258, 449, 763
NlaIII CATG 2 cut(s) 337, 756
NlaIV GGNNCC 1 cut(s) 451
NmuCI GTSAC 2 cut(s) 97, 523
NsiI ATGCAT 1 cut(s) 758
NspV TTCGAA 1 cut(s) 540
PctI GAATGC 2 cut(s) 314, 756
PfeI GAWTC 2 cut(s) 356, 542
PkrI GCNGC 4 cut(s) 275, 587, 590, 679
Ple19I CGATCG 1 cut(s) 51
PleI GAGTC 2 cut(s) 757, 821
PpsI GAGTC 2 cut(s) 757, 821
PpuMI RGGWCCY 1 cut(s) 319
Psp5II RGGWCCY 1 cut(s) 319
PspEI GGTNACC 1 cut(s) 97
PspN4I GGNNCC 1 cut(s) 451
PspPI GGNCC 3 cut(s) 205, 319, 566
PspPPI RGGWCCY 1 cut(s) 319
PstNI CAGNNNCTG 1 cut(s) 591
PsuI RGATCY 2 cut(s) 258, 449
PvuI CGATCG 1 cut(s) 51
PvuII CAGCTG 1 cut(s) 591
RseI CAYNNNNRTG 2 cut(s) 159, 720
SaqAI TTAA 3 cut(s) 468, 696, 833
SatI GCNGC 4 cut(s) 274, 586, 589, 678
Sau3AI GATC 4 cut(s) 48, 258, 449, 763
Sau96I GGNCC 3 cut(s) 205, 319, 566
SchI GAGTC 2 cut(s) 758, 822
SduI GDGCHC 1 cut(s) 367
SfaNI GCATC 3 cut(s) 116, 277, 664
SfuI TTCGAA 1 cut(s) 540
SinI GGWCC 1 cut(s) 319
SmiMI CAYNNNNRTG 2 cut(s) 159, 720
SmlI CTYRAG 2 cut(s) 443, 779
SmoI CTYRAG 2 cut(s) 443, 779
Sse9I AATT 2 cut(s) 149, 659
SsiI CCGC 2 cut(s) 105, 346
SspMI CTAG 2 cut(s) 399, 841
StyI CCWWGG 3 cut(s) 201, 282, 303
TaiI ACGT 1 cut(s) 506
TaqI TCGA 4 cut(s) 63, 516, 540, 738
TasI AATT 2 cut(s) 149, 659
TfiI GAWTC 2 cut(s) 356, 542
Tru1I TTAA 3 cut(s) 468, 696, 833
Tru9I TTAA 3 cut(s) 468, 696, 833
TscAI CASTG 2 cut(s) 283, 540
TseFI GTSAC 2 cut(s) 97, 523
TseI GCWGC 4 cut(s) 273, 585, 588, 677
Tsp45I GTSAC 2 cut(s) 97, 523
TspDTI ATGAA 3 cut(s) 547, 672, 682
TspRI CASTG 2 cut(s) 283, 540
VpaK11BI GGWCC 1 cut(s) 319
XagI CCTNNNNNAGG 1 cut(s) 470
XapI RAATTY 1 cut(s) 659
XcmI CCANNNNNNNNNTGG 2 cut(s) 134, 588
XspI CTAG 2 cut(s) 399, 841
Zsp2I ATGCAT 1 cut(s) 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.