Rroxscaffold_7G00188530

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000199
Physical Location & Seq
Forward (+)
28109320 .. 28118581
9262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00188530.1

Sequence Viewer

Length: 2382 bp
ATGGACGAACTGAATCTGTCAAACCTGAACCGTATTAGCTTTAAGGCACAGCTAGAGAACTGGAAGAAAACCACAACCAAACTGAACTTTCAAATCCAATATCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACAATTTTCTTTAAAATGGCTGCAGCTTCTCCTTTAAACCCTAAAGCCAACTACCATATTCGATCTATCAGCTTGCCTTCAAAACCGCACCCGCTATTTCAACAATGTGAAGATTATTTGTTGAGAATAATAGCTTCTTCTGATGCCAATTCCTCCTCATCATCAGCCATAAGCAACAAGTTGAGCTGCCTTCTCGATTTGCACAACTGTGTGAATGAGTTGTTTCAGTTGCCCCTAACCCAAGAAGCCTTTGTTCGGGAGCGAAATGAGAAATGGGTCGATGAGCTCTTGGATAGATCCCTCAGGCTCTTGGATGTCTGCACAGCAGCCAAGGATGCCTTGATACACACCAAGGAATGCGCACGCGAAATTCAATCCACCATGCGCAGACGAAGGGGAGGCCAAAGCGGGTTCACAAACGAGGTCAAGAAGTACTTTGCCTCAAGAAAAGTGGTGAAGAAAGCAATCTGCAAGGCCCTTGTGACTTTGAAGAGTTGCGAGAAAAAGTCCAGCTTCTCTTCCACCAACAAAGACAACGTAGCTGTGGCTTTGGTTAGTGTATTGAGGGAGGTTGAAGCAGTTTCTCTCACGGTGTTTGAGTCCCTCTTGTCATTCATCTCCGGATCAAAGGCACAATCGAAGATGAGGGGCTGGTCTTTCGTTTCCAAGATAATGCTCAACAAAAAAGTTGCTTGTGACGAAGAGAAATCGGAAGTAAACGAATTTGCTGATGTGGATGCTGCATTAAGCTGCCTTGTTGGCCAAGAAACAAGCAAATCAGACAACATCTCCTGCAACGAGGATGTGCAAAGCGATCTGCAACAATTGGAATCATGCAGTCAAGATCTAGAAGAAGGACTCGAATCCCAAGAGAAGCATAAGAACATGGTTACAGTATTAGATGGATCTCTCAGTCTCTTGGATGTTTGTAGCACTGCTAAGGATGCCCTGTCGCAAACCAAGGTCTGCACGCAAGATCTTCAATCTATCATTCGAAGAAGGCGTGCAGAACAACCTGGAGTACTAACAACTGAGGTTAGGAAATACTTAACCTCCAGGAAGACGATTAAAAAGGGACTCCACAAGGCTTTGGAGAAGCTGAAGGCAACAGCAAACAGATCCACTTTCTCTTCCGCCCACAAGGACCAAGACACTATCGCCATTGTTAGCAAGTTGAGAGACGTTGAAGCAGTCACAGTCACCGTGTTTGAATCAGTGCTGTCCTTCATCTCTGGACCAAAGCCCAAGCCTAGCAGCTGGTCATTGGTTTCCAAGATAGTACAATCAAAGAAAGTAGCTTGTGAGGAAGAAGCAAAAGTAAATGAATTTGCAGACGTGGATACTGCATTAAAGTCACTCAAGAGTGCAGAGAATGCACAGAACCAGCTTAACAATCTGGAGTCGTGCATTCAAGACCTAGAAGAAGGACTCGACTTCCCCTCCAGGTCACACCCTCTCATTCAAGAAGTTGATGAACAATTGTACAGATTGACGTCTTCCAAAGCCACCTCCACATCATCATCATCAATAAGCCACCAACTAAATGGTCTGCAAGACTTGCATGACTGTGTTGATAGGTTGCTTCAATTGCCACACACCCAACAAGCCTTAGCCCAAGAGAAGCATGAAAAATGGGCTAATGAACTATTAGATGGCTCTCTCAGGCTCTTGGATATTTGCAGCACTGCCAAAGATGCCTTGTTGCTAACCAAGGAATGCATTCAGAACCTTCAGTCAATCGTCCGAAGAAGAGGAGGAGGAAAATCTGATGTACTCGCAAGTGAAGTTAGGAAATACTTAACCTCCAGAAAGATGGTGAAAAAGTCACTCCACATTAAGGCTATGGGGAATCGGAAGGAAATGGAAAACAAATCCAATTTCTCTTCCCTCAACAAGGACCAAGAGACAATCGCCATTATTAGCAAGCTGAGAGATGTTGAAGCAGTCACTCGAACAGTGTTTGAACCAATATTGTCCTTCATCTCTGGGCCAAAGGTATCAAGCAGCTGGTCAATTATATCCATGATGTTCCAGTCAAAAAGAGTAGCTTGTGAGGAAGAAGCAGAAGTAAACGAATTTGCAGAGGTGGATGCTGCATTGAAGTCACACAAGAGTTTAGACAATGCACAAAACCAGCTTAACAATCTGGAGTCATGCATCCAAGACCAAGAAGAAGGACTCGAGTGCCTATTTAGGCAAATGATAAAAACAAGAGTCTCCCTACTCAACATCCTCAACCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

793

Amino Acids

88.67

Weight (kDa)

8.31

Isoelectric Point (pI)

52.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BPS1 PF03087 106 - 335 5.2e-73 Protein BPS1
BPS1 PF03087 335 - 529 3.9e-57 Protein BPS1
BPS1 PF03087 560 - 790 1.9e-81 Protein BPS1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1634
Acc16I TGCGCA 2 cut(s) 499, 524
AccII CGCG 1 cut(s) 504
AccIII TCCGGA 1 cut(s) 758
AciI CCGC 4 cut(s) 224, 230, 546, 1272
AclWI GGATC 4 cut(s) 429, 769, 1051, 1251
AcoI YGGCCR 1 cut(s) 898
AcsI RAATTY 4 cut(s) 507, 860, 1463, 2213
AcuI CTGAAG 2 cut(s) 1259, 1853
AcyI GRCGYC 1 cut(s) 1631
AfaI GTAC 5 cut(s) 572, 1161, 1419, 1622, 1911
AfiI CCNNNNNNNGG 3 cut(s) 393, 1975, 2032
AjiI CACGTC 1 cut(s) 1474
AjnI CCWGG 3 cut(s) 1153, 1193, 1580
AleI CACNNNNGTG 1 cut(s) 345
Alw21I GWGCWC 1 cut(s) 426
Alw26I GTCTC 4 cut(s) 1058, 1311, 2036, 2359
AlwI GGATC 4 cut(s) 429, 769, 1051, 1251
Ama87I CYCGRG 1 cut(s) 2318
Aor13HI TCCGGA 1 cut(s) 758
AoxI GGCC 4 cut(s) 538, 612, 898, 2126
ApoI RAATTY 4 cut(s) 507, 860, 1463, 2213
Asp700I GAANNNNTTC 1 cut(s) 1857
AspLEI GCGC 2 cut(s) 500, 525
AspS9I GGNCC 5 cut(s) 613, 1282, 1373, 2035, 2126
AsuHPI GGTGA 3 cut(s) 604, 1330, 1966
AsuII TTCGAA 1 cut(s) 1132
AvaI CYCGRG 1 cut(s) 2318
AvaII GGWCC 3 cut(s) 1282, 1373, 2035
AxyI CCTNAGG 1 cut(s) 440
BalI TGGCCA 1 cut(s) 900
BanII GRGCYC 1 cut(s) 426
BbsI GAAGAC 2 cut(s) 1205, 1626
Bbv12I GWGCWC 1 cut(s) 426
BccI CCATC 3 cut(s) 1034, 1784, 1945
BciT130I CCWGG 3 cut(s) 1155, 1195, 1582
BciVI GTATCC 1 cut(s) 1471
BcoDI GTCTC 4 cut(s) 1058, 1311, 2036, 2359
BfaI CTAG 4 cut(s) 53, 986, 1389, 1556
BfmI CTRYAG 1 cut(s) 159
BfuI GTATCC 1 cut(s) 1471
BglI GCCNNNNNGGC 1 cut(s) 897
BglII AGATCT 2 cut(s) 982, 1114
BmcAI AGTACT 2 cut(s) 572, 1161
Bme1390I CCNGG 3 cut(s) 1155, 1195, 1582
Bme18I GGWCC 3 cut(s) 1282, 1373, 2035
BmeT110I CYCGRG 1 cut(s) 2318
BmgBI CACGTC 1 cut(s) 1474
BmgT120I GGNCC 5 cut(s) 613, 1282, 1373, 2035, 2126
BmrFI CCNGG 3 cut(s) 1155, 1195, 1582
BmsI GCATC 7 cut(s) 271, 463, 865, 1072, 1822, 2218, 2304
BpiI GAAGAC 2 cut(s) 1205, 1626
BpmI CTGGAG 6 cut(s) 1176, 1177, 1556, 1564, 1927, 2306
Bpu10I CCTNAGC 2 cut(s) 1077, 1747
Bpu14I TTCGAA 1 cut(s) 1132
BpuEI CTTGAG 2 cut(s) 565, 1481
BsaHI GRCGYC 1 cut(s) 1631
BsaJI CCNNGG 4 cut(s) 468, 489, 1098, 1848
BsaWI WCCGGW 1 cut(s) 758
BsaXI ACNNNNNCTCC 8 cut(s) 911, 941, 1175, 1205, 1562, 1592, 1925, 1955
Bsc4I CCNNNNNNNGG 3 cut(s) 393, 1975, 2032
Bse1I ACTGG 2 cut(s) 65, 2170
Bse21I CCTNAGG 1 cut(s) 440
BseAI TCCGGA 1 cut(s) 758
BseBI CCWGG 3 cut(s) 1155, 1195, 1582
BseDI CCNNGG 4 cut(s) 468, 489, 1098, 1848
BseGI GGATG 9 cut(s) 457, 478, 880, 946, 1066, 1087, 2233, 2295, 2367
BseLI CCNNNNNNNGG 3 cut(s) 393, 1975, 2032
BseMII CTCAG 5 cut(s) 454, 1063, 1161, 1813, 2057
BseNI ACTGG 2 cut(s) 65, 2170
BseRI GAGGAG 3 cut(s) 283, 1905, 1908
BsgI GTGCAG 4 cut(s) 442, 1090, 1164, 1524
Bsh1236I CGCG 1 cut(s) 504
BshFI GGCC 4 cut(s) 540, 614, 900, 2128
BsiHKAI GWGCWC 1 cut(s) 426
BsiHKCI CYCGRG 1 cut(s) 2318
BsiSI CCGG 1 cut(s) 759
BslFI GGGAC 2 cut(s) 724, 1227
BslI CCNNNNNNNGG 3 cut(s) 393, 1975, 2032
BsmAI GTCTC 4 cut(s) 1058, 1311, 2036, 2359
BsmBI CGTCTC 1 cut(s) 1311
BsmFI GGGAC 2 cut(s) 724, 1227
BsmI GAATGC 5 cut(s) 500, 1516, 1545, 1857, 1859
BsnI GGCC 4 cut(s) 540, 614, 900, 2128
BsoBI CYCGRG 1 cut(s) 2318
Bsp119I TTCGAA 1 cut(s) 1132
Bsp1286I GDGCHC 1 cut(s) 426
Bsp13I TCCGGA 1 cut(s) 758
Bsp1407I TGTACA 1 cut(s) 1620
Bsp143I GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
BspACI CCGC 4 cut(s) 224, 230, 546, 1272
BspANI GGCC 4 cut(s) 540, 614, 900, 2128
BspCNI CTCAG 5 cut(s) 453, 1062, 1162, 1812, 2058
BspEI TCCGGA 1 cut(s) 758
BspFNI CGCG 1 cut(s) 504
BspMAI CTGCAG 1 cut(s) 163
BspPI GGATC 4 cut(s) 429, 769, 1051, 1251
BspT104I TTCGAA 1 cut(s) 1132
BsrGI TGTACA 1 cut(s) 1620
BsrI ACTGG 2 cut(s) 65, 2170
BssECI CCNNGG 4 cut(s) 468, 489, 1098, 1848
BssMI GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
BssNI GRCGYC 1 cut(s) 1631
BssT1I CCWWGG 4 cut(s) 468, 489, 1098, 1848
Bst2UI CCWGG 3 cut(s) 1155, 1195, 1582
Bst4CI ACNGT 8 cut(s) 32, 347, 730, 1033, 1336, 1342, 1706, 2095
Bst6I CTCTTC 6 cut(s) 623, 661, 834, 1273, 1882, 2026
BstACI GRCGYC 1 cut(s) 1631
BstAPI GCANNNNNTGC 2 cut(s) 1511, 1696
BstAUI TGTACA 1 cut(s) 1620
BstBI TTCGAA 1 cut(s) 1132
BstC8I GCNNGC 5 cut(s) 212, 502, 1109, 1143, 2063
BstDEI CTNAG 7 cut(s) 440, 1049, 1077, 1170, 1747, 1799, 2066
BstENI CCTNNNNNAGG 1 cut(s) 2030
BstF5I GGATG 9 cut(s) 457, 478, 880, 946, 1066, 1087, 2233, 2295, 2367
BstFNI CGCG 1 cut(s) 504
BstHHI GCGC 2 cut(s) 500, 525
BstKTI GATC 8 cut(s) 203, 437, 764, 955, 985, 1046, 1117, 1259
BstMAI GTCTC 4 cut(s) 1058, 1311, 2036, 2359
BstMBI GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
BstMWI GCNNNNNNNGC 7 cut(s) 473, 897, 1082, 1511, 1696, 1726, 1832
BstNI CCWGG 3 cut(s) 1155, 1195, 1582
BstSCI CCNGG 3 cut(s) 1153, 1193, 1580
BstSFI CTRYAG 1 cut(s) 159
BstUI CGCG 1 cut(s) 504
BstV2I GAAGAC 2 cut(s) 1205, 1626
BstX2I RGATCY 5 cut(s) 434, 982, 1043, 1114, 1256
BstXI CCANNNNNNTGG 2 cut(s) 1682, 1951
BstYI RGATCY 5 cut(s) 434, 982, 1043, 1114, 1256
Bsu36I CCTNAGG 1 cut(s) 440
BsuI GTATCC 1 cut(s) 1471
BsuRI GGCC 4 cut(s) 540, 614, 900, 2128
BtrI CACGTC 1 cut(s) 1474
BtsCI GGATG 9 cut(s) 457, 478, 880, 946, 1066, 1087, 2233, 2295, 2367
BtsI GCAGTG 2 cut(s) 1071, 1821
BtsIMutI CAGTG 4 cut(s) 1071, 1359, 1821, 2100
Cac8I GCNNGC 5 cut(s) 212, 502, 1109, 1143, 2063
CfoI GCGC 2 cut(s) 500, 525
Cfr13I GGNCC 5 cut(s) 613, 1282, 1373, 2035, 2126
Csp6I GTAC 5 cut(s) 571, 1160, 1418, 1621, 1910
CspCI CAANNNNNGTGG 2 cut(s) 570, 605
CviAII CATG 7 cut(s) 520, 972, 1024, 1700, 1763, 2161, 2292
CviQI GTAC 5 cut(s) 571, 1160, 1418, 1621, 1910
DdeI CTNAG 7 cut(s) 440, 1049, 1077, 1170, 1747, 1799, 2066
DpnI GATC 8 cut(s) 202, 436, 763, 954, 984, 1045, 1116, 1258
DpnII GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
DraI TTTAAA 2 cut(s) 151, 174
EaeI YGGCCR 1 cut(s) 898
Eam1104I CTCTTC 6 cut(s) 623, 661, 834, 1273, 1882, 2026
EarI CTCTTC 6 cut(s) 623, 661, 834, 1273, 1882, 2026
EciI GGCGGA 1 cut(s) 1261
Ecl136II GAGCTC 1 cut(s) 424
Eco130I CCWWGG 4 cut(s) 468, 489, 1098, 1848
Eco24I GRGCYC 1 cut(s) 426
Eco47I GGWCC 3 cut(s) 1282, 1373, 2035
Eco53kI GAGCTC 1 cut(s) 424
Eco57I CTGAAG 2 cut(s) 1259, 1853
Eco81I CCTNAGG 1 cut(s) 440
Eco88I CYCGRG 1 cut(s) 2318
EcoICRI GAGCTC 1 cut(s) 424
EcoNI CCTNNNNNAGG 1 cut(s) 2030
EcoO109I RGGNCCY 1 cut(s) 613
EcoRII CCWGG 3 cut(s) 1153, 1193, 1580
EcoT14I CCWWGG 4 cut(s) 468, 489, 1098, 1848
EcoT22I ATGCAT 2 cut(s) 1859, 2297
EcoT38I GRGCYC 1 cut(s) 426
ErhI CCWWGG 4 cut(s) 468, 489, 1098, 1848
Esp3I CGTCTC 1 cut(s) 1311
FaeI CATG 7 cut(s) 523, 975, 1027, 1703, 1766, 2164, 2295
FalI AAGNNNNNCTT 8 cut(s) 461, 493, 557, 589, 635, 667, 2170, 2202
FaqI GGGAC 2 cut(s) 724, 1227
FatI CATG 7 cut(s) 519, 971, 1023, 1699, 1762, 2160, 2291
FauI CCCGC 2 cut(s) 237, 539
FokI GGATG 9 cut(s) 464, 485, 887, 953, 1073, 1094, 2240, 2282, 2354
FriOI GRGCYC 1 cut(s) 426
FspAI RTGCGCAY 1 cut(s) 499
FspBI CTAG 4 cut(s) 53, 986, 1389, 1556
FspI TGCGCA 2 cut(s) 499, 524
GlaI GCGC 2 cut(s) 499, 524
GsuI CTGGAG 6 cut(s) 1176, 1177, 1556, 1564, 1927, 2306
HaeIII GGCC 4 cut(s) 540, 614, 900, 2128
HapII CCGG 1 cut(s) 759
HhaI GCGC 2 cut(s) 500, 525
Hin1I GRCGYC 1 cut(s) 1631
Hin1II CATG 7 cut(s) 523, 975, 1027, 1703, 1766, 2164, 2295
Hin6I GCGC 2 cut(s) 498, 523
HinP1I GCGC 2 cut(s) 498, 523
HpaII CCGG 1 cut(s) 759
HphI GGTGA 3 cut(s) 604, 1330, 1966
Hpy166II GTNNAC 3 cut(s) 552, 856, 2209
Hpy188I TCNGA 7 cut(s) 280, 850, 919, 1863, 1883, 1906, 1992
Hpy8I GTNNAC 3 cut(s) 552, 856, 2209
HpyCH4III ACNGT 8 cut(s) 32, 347, 730, 1033, 1336, 1342, 1706, 2095
HpyCH4IV ACGT 4 cut(s) 675, 1320, 1473, 1631
HpyF10VI GCNNNNNNNGC 7 cut(s) 473, 897, 1082, 1511, 1696, 1726, 1832
HpyF3I CTNAG 7 cut(s) 440, 1049, 1077, 1170, 1747, 1799, 2066
HpySE526I ACGT 4 cut(s) 675, 1320, 1473, 1631
Hsp92I GRCGYC 1 cut(s) 1631
Hsp92II CATG 7 cut(s) 523, 975, 1027, 1703, 1766, 2164, 2295
HspAI GCGC 2 cut(s) 498, 523
Kpn2I TCCGGA 1 cut(s) 758
Kzo9I GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
LmnI GCTCC 1 cut(s) 397
LweI GCATC 7 cut(s) 271, 463, 865, 1072, 1822, 2218, 2304
MaeI CTAG 4 cut(s) 53, 986, 1389, 1556
MaeII ACGT 4 cut(s) 675, 1320, 1473, 1631
MalI GATC 8 cut(s) 202, 436, 763, 954, 984, 1045, 1116, 1258
MboI GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
MfeI CAATTG 3 cut(s) 962, 1616, 1724
MflI RGATCY 5 cut(s) 434, 982, 1043, 1114, 1256
MhlI GDGCHC 1 cut(s) 426
MlsI TGGCCA 1 cut(s) 900
MluNI TGGCCA 1 cut(s) 900
MlyI GAGTC 8 cut(s) 746, 990, 1209, 1547, 1560, 2297, 2310, 2361
Mox20I TGGCCA 1 cut(s) 900
Mph1103I ATGCAT 2 cut(s) 1859, 2297
MroI TCCGGA 1 cut(s) 758
MroXI GAANNNNTTC 1 cut(s) 1857
MscI TGGCCA 1 cut(s) 900
MslI CAYNNNNRTG 2 cut(s) 345, 1704
Msp20I TGGCCA 1 cut(s) 900
MspA1I CMGCKG 2 cut(s) 1395, 2145
MspI CCGG 1 cut(s) 759
MspR9I CCNGG 3 cut(s) 1155, 1195, 1582
MunI CAATTG 3 cut(s) 962, 1616, 1724
Mva1269I GAATGC 5 cut(s) 500, 1516, 1545, 1857, 1859
MvaI CCWGG 3 cut(s) 1155, 1195, 1582
MvnI CGCG 1 cut(s) 504
MwoI GCNNNNNNNGC 7 cut(s) 473, 897, 1082, 1511, 1696, 1726, 1832
NdeII GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
NlaIII CATG 7 cut(s) 523, 975, 1027, 1703, 1766, 2164, 2295
NmuCI GTSAC 9 cut(s) 619, 833, 1330, 1336, 1491, 1584, 1962, 2083, 2241
NsbI TGCGCA 2 cut(s) 499, 524
NsiI ATGCAT 2 cut(s) 1859, 2297
NspV TTCGAA 1 cut(s) 1132
OliI CACNNNNGTG 1 cut(s) 345
PaeR7I CTCGAG 1 cut(s) 2318
PcsI WCGNNNNNNNCGW 1 cut(s) 1138
PctI GAATGC 5 cut(s) 500, 1516, 1545, 1857, 1859
PdmI GAANNNNTTC 1 cut(s) 1857
PfeI GAWTC 5 cut(s) 13, 968, 1001, 1349, 1987
PfoI TCCNGGA 1 cut(s) 1193
PleI GAGTC 8 cut(s) 745, 990, 1209, 1546, 1560, 2296, 2310, 2360
PpsI GAGTC 8 cut(s) 745, 990, 1209, 1546, 1560, 2296, 2310, 2360
Psp124BI GAGCTC 1 cut(s) 426
Psp6I CCWGG 3 cut(s) 1153, 1193, 1580
PspGI CCWGG 3 cut(s) 1153, 1193, 1580
PspPI GGNCC 5 cut(s) 613, 1282, 1373, 2035, 2126
PspXI VCTCGAGB 1 cut(s) 2318
PstI CTGCAG 1 cut(s) 163
PsuI RGATCY 5 cut(s) 434, 982, 1043, 1114, 1256
PvuII CAGCTG 2 cut(s) 1395, 2145
RsaI GTAC 5 cut(s) 572, 1161, 1419, 1622, 1911
RsaNI GTAC 5 cut(s) 571, 1160, 1418, 1621, 1910
RseI CAYNNNNRTG 2 cut(s) 345, 1704
SacI GAGCTC 1 cut(s) 426
Sau3AI GATC 8 cut(s) 200, 434, 761, 952, 982, 1043, 1114, 1256
Sau96I GGNCC 5 cut(s) 613, 1282, 1373, 2035, 2126
ScaI AGTACT 2 cut(s) 572, 1161
SchI GAGTC 8 cut(s) 746, 990, 1209, 1547, 1560, 2297, 2310, 2361
ScrFI CCNGG 3 cut(s) 1155, 1195, 1582
SduI GDGCHC 1 cut(s) 426
SfaNI GCATC 7 cut(s) 271, 463, 865, 1072, 1822, 2218, 2304
SfcI CTRYAG 1 cut(s) 159
Sfr274I CTCGAG 1 cut(s) 2318
SfuI TTCGAA 1 cut(s) 1132
SinI GGWCC 3 cut(s) 1282, 1373, 2035
SlaI CTCGAG 1 cut(s) 2318
SmiMI CAYNNNNRTG 2 cut(s) 345, 1704
SmlI CTYRAG 3 cut(s) 580, 1496, 2318
SmoI CTYRAG 3 cut(s) 580, 1496, 2318
SsiI CCGC 4 cut(s) 224, 230, 546, 1272
SspI AATATT 1 cut(s) 2109
SspMI CTAG 4 cut(s) 53, 986, 1389, 1556
SstI GAGCTC 1 cut(s) 426
StyD4I CCNGG 3 cut(s) 1153, 1193, 1580
StyI CCWWGG 4 cut(s) 468, 489, 1098, 1848
TaaI ACNGT 8 cut(s) 32, 347, 730, 1033, 1336, 1342, 1706, 2095
TaiI ACGT 4 cut(s) 678, 1323, 1476, 1634
TaqI TCGA 9 cut(s) 199, 333, 417, 776, 999, 1132, 1569, 2089, 2319
TatI WGTACW 5 cut(s) 570, 1159, 1417, 1620, 1909
TfiI GAWTC 5 cut(s) 13, 968, 1001, 1349, 1987
TscAI CASTG 4 cut(s) 1078, 1359, 1828, 2100
TseFI GTSAC 9 cut(s) 619, 833, 1330, 1336, 1491, 1584, 1962, 2083, 2241
Tsp45I GTSAC 9 cut(s) 619, 833, 1330, 1336, 1491, 1584, 1962, 2083, 2241
TspDTI ATGAA 7 cut(s) 742, 1354, 1476, 1626, 1779, 1794, 2107
TspRI CASTG 4 cut(s) 1078, 1359, 1828, 2100
VpaK11BI GGWCC 3 cut(s) 1282, 1373, 2035
XagI CCTNNNNNAGG 1 cut(s) 2030
XapI RAATTY 4 cut(s) 507, 860, 1463, 2213
XbaI TCTAGA 1 cut(s) 985
XcmI CCANNNNNNNNNTGG 1 cut(s) 1679
XhoI CTCGAG 1 cut(s) 2318
XmnI GAANNNNTTC 1 cut(s) 1857
XspI CTAG 4 cut(s) 53, 986, 1389, 1556
ZraI GACGTC 1 cut(s) 1632
ZrmI AGTACT 2 cut(s) 572, 1161
Zsp2I ATGCAT 2 cut(s) 1859, 2297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.