Prupe.8G175600_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000199
Physical Location & Seq
Forward (+)
17806658 .. 17807509
852 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G175600.1

Sequence Viewer

Length: 852 bp
ATGGCTTTCCACACTCGCTCTAACAGCTTCCCCTCTAGGTCACACCCGGTCCTTCAAGAAGTTGATGAACTCTTGTGCAGATTGAGATCTTCTGAGGCCACCTCTGCATCTTCATCTTCAATAAGCCACAAACTAAGTGGCCTCCAAGACTTGCACGATTGTGTTGATAGGTTGCTTCAGTTGCCCCTCACTCAGCAAGCCTTAGCACAAGAGCAGAATGAGAAATGGGCTAATGAGCTACTAGATGGCTCTCTCAGACTCTTGGATGTTTCTAGCAGTGCCAAGGATGCCATCTTGCAAACTAAGGAATGCGTACAGGATCTTCAATCGATCATAAGAAGGAGAGGAGGTGAAACTGGTCTCACAAGTGAGGTTAGGAAATACTTAACCTCTAGGAAGATGGTGAAAAAGGCAATCCAAAAGGCTATGAAGAATCTCAAGGGAACCGAAAACAGAACCACATTTTCTTCCCTCAACAAGGACGATGAGACATTTTCCGTTGTTAGCAAGTTGAGAGAAGTTGAAGCAATCACCCTCGCAGTGTTTGAGTCACTTCTTTCCTTCATATCCGGGCCAAAATCACAGCCCAGCAGCTGGTCACTAGTCTCCAAGATGATGCAGTCAAAGAAAGTGGCTTGTGAGGAAGCAACAGAAATAAATGAATTTGCAGAGGTGGATGCTGCATTGAACTCACTCATTAGACACAAGGCAAGCAAGCCTAGTGCTGATGATGCCCACAATCAACTTGACCAACTGGAGTCATGCATTCAAGACCAAGAACAAGGACTTGAGTGCCTATTTAGGCAAATGATCAAAACAAGAGTCTCCCTCCTCAACATCCTAAACCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

284

Amino Acids

31.63

Weight (kDa)

6.67

Isoelectric Point (pI)

63.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 594
AclWI GGATC 1 cut(s) 327
AcsI RAATTY 1 cut(s) 662
AcuI CTGAAG 1 cut(s) 161
AfaI GTAC 1 cut(s) 315
AfiI CCNNNNNNNGG 2 cut(s) 478, 594
AgsI TTSAA 6 cut(s) 56, 120, 326, 524, 688, 770
AhlI ACTAGT 1 cut(s) 601
AleI CACNNNNGTG 1 cut(s) 159
AluBI AGCT 3 cut(s) 27, 238, 594
AluI AGCT 3 cut(s) 27, 238, 594
Alw26I GTCTC 4 cut(s) 365, 482, 610, 829
AlwI GGATC 1 cut(s) 327
AlwNI CAGNNNCTG 1 cut(s) 594
AoxI GGCC 3 cut(s) 96, 139, 572
ApeKI GCWGC 2 cut(s) 591, 680
ApoI RAATTY 1 cut(s) 662
ArsI GACNNNNNNTTYG 2 cut(s) 807, 839
AspS9I GGNCC 2 cut(s) 49, 572
AsuC2I CCSGG 2 cut(s) 47, 571
AsuHPI GGTGA 3 cut(s) 362, 415, 523
AvaII GGWCC 1 cut(s) 49
BarI GAAGNNNNNNTAC 2 cut(s) 306, 338
BbvI GCAGC 2 cut(s) 603, 667
BccI CCATC 3 cut(s) 239, 299, 394
BclI TGATCA 1 cut(s) 810
BcnI CCSGG 2 cut(s) 47, 571
BcoDI GTCTC 4 cut(s) 365, 482, 610, 829
BcuI ACTAGT 1 cut(s) 601
BfaI CTAG 7 cut(s) 36, 242, 273, 393, 602, 720, 850
BglII AGATCT 1 cut(s) 86
BisI GCNGC 2 cut(s) 592, 681
BlsI GCNGC 2 cut(s) 593, 682
Bme1390I CCNGG 2 cut(s) 47, 571
Bme18I GGWCC 1 cut(s) 49
BmgT120I GGNCC 2 cut(s) 49, 572
BmiI GGNNCC 1 cut(s) 445
BmrFI CCNGG 2 cut(s) 47, 571
BmsI GCATC 5 cut(s) 116, 277, 606, 667, 721
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 813, 845
BpmI CTGGAG 1 cut(s) 776
Bpu10I CCTNAGC 1 cut(s) 202
BpuEI CTTGAG 2 cut(s) 422, 809
BpuMI CCSGG 2 cut(s) 47, 571
Bsa29I ATCGAT 1 cut(s) 329
BsaBI GATNNNNATC 1 cut(s) 85
BsaI GGTCTC 1 cut(s) 365
BsaJI CCNNGG 1 cut(s) 282
BsaXI ACNNNNNCTCC 2 cut(s) 334, 364
Bsc4I CCNNNNNNNGG 2 cut(s) 478, 594
Bse1I ACTGG 2 cut(s) 361, 759
Bse8I GATNNNNATC 1 cut(s) 85
BseCI ATCGAT 1 cut(s) 329
BseDI CCNNGG 1 cut(s) 282
BseGI GGATG 4 cut(s) 271, 292, 682, 837
BseJI GATNNNNATC 1 cut(s) 85
BseLI CCNNNNNNNGG 2 cut(s) 478, 594
BseMII CTCAG 3 cut(s) 84, 206, 268
BseNI ACTGG 2 cut(s) 361, 759
BseRI GAGGAG 2 cut(s) 360, 821
BseXI GCAGC 2 cut(s) 603, 667
BseYI CCCAGC 1 cut(s) 587
BsgI GTGCAG 1 cut(s) 97
BshFI GGCC 3 cut(s) 98, 141, 574
BshVI ATCGAT 1 cut(s) 329
BsiSI CCGG 2 cut(s) 47, 570
BslI CCNNNNNNNGG 2 cut(s) 478, 594
BsmAI GTCTC 4 cut(s) 365, 482, 610, 829
BsmI GAATGC 2 cut(s) 314, 765
BsnI GGCC 3 cut(s) 98, 141, 574
Bso31I GGTCTC 1 cut(s) 365
Bsp143I GATC 4 cut(s) 86, 319, 330, 810
BspANI GGCC 3 cut(s) 98, 141, 574
BspCNI CTCAG 3 cut(s) 85, 205, 267
BspDI ATCGAT 1 cut(s) 329
BspLI GGNNCC 1 cut(s) 445
BspPI GGATC 1 cut(s) 327
BspTNI GGTCTC 1 cut(s) 365
BsrI ACTGG 2 cut(s) 361, 759
BssECI CCNNGG 1 cut(s) 282
BssMI GATC 4 cut(s) 86, 319, 330, 810
BssT1I CCWWGG 1 cut(s) 282
BstC8I GCNNGC 3 cut(s) 198, 712, 716
BstDEI CTNAG 6 cut(s) 93, 134, 192, 202, 254, 303
BstENI CCTNNNNNAGG 1 cut(s) 476
BstF5I GGATG 4 cut(s) 271, 292, 682, 837
BstKTI GATC 4 cut(s) 89, 322, 333, 813
BstMAI GTCTC 4 cut(s) 365, 482, 610, 829
BstMBI GATC 4 cut(s) 86, 319, 330, 810
BstMWI GCNNNNNNNGC 5 cut(s) 24, 104, 181, 287, 731
BstSCI CCNGG 2 cut(s) 45, 569
BstV1I GCAGC 2 cut(s) 603, 667
BstX2I RGATCY 2 cut(s) 86, 319
BstYI RGATCY 2 cut(s) 86, 319
Bsu15I ATCGAT 1 cut(s) 329
BsuRI GGCC 3 cut(s) 98, 141, 574
BsuTUI ATCGAT 1 cut(s) 329
BtsCI GGATG 4 cut(s) 271, 292, 682, 837
BtsI GCAGTG 2 cut(s) 283, 546
BtsIMutI CAGTG 2 cut(s) 283, 546
Cac8I GCNNGC 3 cut(s) 198, 712, 716
CaiI CAGNNNCTG 1 cut(s) 594
Cfr13I GGNCC 2 cut(s) 49, 572
ClaI ATCGAT 1 cut(s) 329
Csp6I GTAC 1 cut(s) 314
CspCI CAANNNNNGTGG 4 cut(s) 118, 153, 612, 647
CviAII CATG 1 cut(s) 762
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 6 cut(s) 93, 134, 192, 202, 254, 303
DpnI GATC 4 cut(s) 88, 321, 332, 812
DpnII GATC 4 cut(s) 86, 319, 330, 810
Eco130I CCWWGG 1 cut(s) 282
Eco31I GGTCTC 1 cut(s) 365
Eco47I GGWCC 1 cut(s) 49
Eco57I CTGAAG 1 cut(s) 161
EcoNI CCTNNNNNAGG 1 cut(s) 476
EcoT14I CCWWGG 1 cut(s) 282
EcoT22I ATGCAT 1 cut(s) 767
ErhI CCWWGG 1 cut(s) 282
FaeI CATG 1 cut(s) 765
FaiI YATR 4 cut(s) 335, 428, 566, 763
FatI CATG 1 cut(s) 761
FbaI TGATCA 1 cut(s) 810
Fnu4HI GCNGC 2 cut(s) 592, 681
FokI GGATG 4 cut(s) 278, 299, 689, 824
Fsp4HI GCNGC 2 cut(s) 592, 681
FspBI CTAG 7 cut(s) 36, 242, 273, 393, 602, 720, 850
GluI GCNGC 2 cut(s) 592, 681
GsaI CCCAGC 1 cut(s) 591
GsuI CTGGAG 1 cut(s) 776
HaeIII GGCC 3 cut(s) 98, 141, 574
HapII CCGG 2 cut(s) 47, 570
Hin1II CATG 1 cut(s) 765
HinfI GANTC 5 cut(s) 258, 433, 548, 758, 822
HpaII CCGG 2 cut(s) 47, 570
HphI GGTGA 3 cut(s) 362, 415, 523
Hpy188I TCNGA 2 cut(s) 94, 257
Hpy188III TCNNGA 2 cut(s) 56, 770
HpyAV CCTTC 3 cut(s) 62, 333, 571
HpyCH4V TGCA 8 cut(s) 78, 107, 154, 298, 619, 668, 683, 765
HpyF10VI GCNNNNNNNGC 5 cut(s) 24, 104, 181, 287, 731
HpyF3I CTNAG 6 cut(s) 93, 134, 192, 202, 254, 303
Hsp92II CATG 1 cut(s) 765
Ksp22I TGATCA 1 cut(s) 810
Kzo9I GATC 4 cut(s) 86, 319, 330, 810
LpnPI CCDG 7 cut(s) 60, 302, 342, 580, 583, 601, 740
Lsp1109I GCAGC 2 cut(s) 603, 667
LweI GCATC 5 cut(s) 116, 277, 606, 667, 721
MaeI CTAG 7 cut(s) 36, 242, 273, 393, 602, 720, 850
MaeIII GTNAC 3 cut(s) 39, 549, 597
MalI GATC 4 cut(s) 88, 321, 332, 812
MboI GATC 4 cut(s) 86, 319, 330, 810
MboII GAAGA 7 cut(s) 81, 102, 108, 314, 409, 442, 459
MflI RGATCY 2 cut(s) 86, 319
MluCI AATT 1 cut(s) 662
MlyI GAGTC 4 cut(s) 252, 557, 767, 831
Mph1103I ATGCAT 1 cut(s) 767
MseI TTAA 1 cut(s) 386
MslI CAYNNNNRTG 1 cut(s) 159
MspA1I CMGCKG 1 cut(s) 594
MspI CCGG 2 cut(s) 47, 570
MspR9I CCNGG 2 cut(s) 47, 571
Mva1269I GAATGC 2 cut(s) 314, 765
MwoI GCNNNNNNNGC 5 cut(s) 24, 104, 181, 287, 731
NciI CCSGG 2 cut(s) 47, 571
NdeII GATC 4 cut(s) 86, 319, 330, 810
NlaIII CATG 1 cut(s) 765
NlaIV GGNNCC 1 cut(s) 445
NmuCI GTSAC 3 cut(s) 39, 549, 597
NsiI ATGCAT 1 cut(s) 767
OliI CACNNNNGTG 1 cut(s) 159
PctI GAATGC 2 cut(s) 314, 765
PfeI GAWTC 1 cut(s) 433
PflMI CCANNNNNTGG 1 cut(s) 594
PkrI GCNGC 2 cut(s) 593, 682
PleI GAGTC 4 cut(s) 252, 556, 766, 830
PpsI GAGTC 4 cut(s) 252, 556, 766, 830
PspFI CCCAGC 1 cut(s) 587
PspN4I GGNNCC 1 cut(s) 445
PspPI GGNCC 2 cut(s) 49, 572
PstNI CAGNNNCTG 1 cut(s) 594
PsuI RGATCY 2 cut(s) 86, 319
PvuII CAGCTG 1 cut(s) 594
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
RseI CAYNNNNRTG 1 cut(s) 159
SaqAI TTAA 1 cut(s) 386
SatI GCNGC 2 cut(s) 592, 681
Sau3AI GATC 4 cut(s) 86, 319, 330, 810
Sau96I GGNCC 2 cut(s) 49, 572
SchI GAGTC 4 cut(s) 252, 557, 767, 831
ScrFI CCNGG 2 cut(s) 47, 571
SfaNI GCATC 5 cut(s) 116, 277, 606, 667, 721
SinI GGWCC 1 cut(s) 49
SmiMI CAYNNNNRTG 1 cut(s) 159
SmlI CTYRAG 2 cut(s) 437, 788
SmoI CTYRAG 2 cut(s) 437, 788
SpeI ACTAGT 1 cut(s) 601
Sse9I AATT 1 cut(s) 662
SspMI CTAG 7 cut(s) 36, 242, 273, 393, 602, 720, 850
StyD4I CCNGG 2 cut(s) 45, 569
StyI CCWWGG 1 cut(s) 282
TaqI TCGA 1 cut(s) 329
TasI AATT 1 cut(s) 662
TfiI GAWTC 1 cut(s) 433
Tru1I TTAA 1 cut(s) 386
Tru9I TTAA 1 cut(s) 386
TscAI CASTG 2 cut(s) 283, 546
TseFI GTSAC 3 cut(s) 39, 549, 597
TseI GCWGC 2 cut(s) 591, 680
Tsp45I GTSAC 3 cut(s) 39, 549, 597
TspDTI ATGAA 5 cut(s) 81, 102, 443, 553, 675
TspGWI ACGGA 1 cut(s) 487
TspRI CASTG 2 cut(s) 283, 546
Van91I CCANNNNNTGG 1 cut(s) 594
VpaK11BI GGWCC 1 cut(s) 49
XagI CCTNNNNNAGG 1 cut(s) 476
XapI RAATTY 1 cut(s) 662
XcmI CCANNNNNNNNNTGG 1 cut(s) 134
XspI CTAG 7 cut(s) 36, 242, 273, 393, 602, 720, 850
Zsp2I ATGCAT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.