Prupe.8G176000_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000199
Physical Location & Seq
Forward (+)
17817875 .. 17818744
870 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G176000.1

Sequence Viewer

Length: 870 bp
ATGGCTTCGCATACTCGTTCTAACAGCTTACCCTCTAGGCCACACCCGATCATTGAAGAAGTTGATGAACTTTTGTGTAGATTGAGGTCTTCTGAGGCCACCTCCACATCTTCATCATCAATATGCAACAAACTAAGTGGCCTCCAAGACTTGCATGATTCTGTTGATAGGTTTCTTCAGTTGCCCCTCACTCAACAAGCCTTAGCCCAAGAGCAGAATGAGAAATGGACTAATGAGTTGTTAGATGGCTCACTCCGGCTGTTGGATGTTTGTGGAACTGCCAAAGATGCCTTGTTGCAAACCAAGGAATGCGTCCAGGACCTTCAATCGATCATGCGAAGAAGGCGGGGAGGTGAAACTGGAGCTCTTACAAGTGAGGTTAGGAAATATTTAACCTCCAGGAAGATGGTGAAAAAGACAATCCAAAAGGCTATGAAGAATCTCAAGGGAACCGAAAACAGATCCACCTTCTCTTCCCTCAACAAGGAGAGTGAGACTATTTCCATTGTGAGTGAGTTGAGAGATGTTGAAGCAGTCACTCTCGCAGTGTTCGAATCACTGCTGTCCTTCATCTCCGGCCCAAAATCACAGCCAGACAGCAGCTGGTCATTGGTCTCCAAGATGATGCAATCAAAACAAGTAGCTTGTGAAGAAGAAACAGAAGTAAACGAATTTGCAGGGGTGGATGCTTCATTGCAGTCACTCATTGGACACAAGACAAGCAAATCTCATTCCCAAAGTGCAGATAATGCACACAACCAGTTGGAGAAGCTGGACGCATGCATTCAAGATCAGGAAGACGGACTAGAGTGCCTACTTAGGCAAATGATAAAAACAAGAGTCTCCCTCCTCAACATCCTAAACCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

290

Amino Acids

32.16

Weight (kDa)

6.02

Isoelectric Point (pI)

69.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 346
AclWI GGATC 1 cut(s) 456
AcsI RAATTY 1 cut(s) 671
AcuI CTGAAG 1 cut(s) 161
AfiI CCNNNNNNNGG 2 cut(s) 262, 484
AgsI TTSAA 4 cut(s) 56, 326, 530, 788
AjnI CCWGG 2 cut(s) 315, 398
AluBI AGCT 5 cut(s) 27, 365, 603, 644, 772
AluI AGCT 5 cut(s) 27, 365, 603, 644, 772
Alw21I GWGCWC 1 cut(s) 367
Alw26I GTCTC 3 cut(s) 488, 619, 847
AlwI GGATC 1 cut(s) 456
AlwNI CAGNNNCTG 1 cut(s) 603
AoxI GGCC 4 cut(s) 38, 96, 139, 577
ApeKI GCWGC 1 cut(s) 600
ApoI RAATTY 1 cut(s) 671
AspS9I GGNCC 2 cut(s) 319, 578
AsuHPI GGTGA 2 cut(s) 365, 421
AsuII TTCGAA 1 cut(s) 552
AvaII GGWCC 1 cut(s) 319
BanII GRGCYC 1 cut(s) 367
BbsI GAAGAC 2 cut(s) 81, 804
Bbv12I GWGCWC 1 cut(s) 367
BbvI GCAGC 1 cut(s) 612
BccI CCATC 2 cut(s) 239, 400
BciT130I CCWGG 2 cut(s) 317, 400
BcoDI GTCTC 3 cut(s) 488, 619, 847
BfaI CTAG 3 cut(s) 36, 806, 868
BisI GCNGC 1 cut(s) 601
BlsI GCNGC 1 cut(s) 602
Bme1390I CCNGG 2 cut(s) 317, 400
Bme18I GGWCC 1 cut(s) 319
BmgT120I GGNCC 2 cut(s) 319, 578
BmiI GGNNCC 1 cut(s) 451
BmrFI CCNGG 2 cut(s) 317, 400
BmsI GCATC 3 cut(s) 277, 615, 676
BpiI GAAGAC 2 cut(s) 81, 804
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 831, 863
BpmI CTGGAG 2 cut(s) 381, 382
Bpu10I CCTNAGC 1 cut(s) 202
Bpu14I TTCGAA 1 cut(s) 552
BpuEI CTTGAG 1 cut(s) 428
Bsa29I ATCGAT 1 cut(s) 329
BsaI GGTCTC 1 cut(s) 619
BsaJI CCNNGG 1 cut(s) 303
Bsc4I CCNNNNNNNGG 2 cut(s) 262, 484
Bse1I ACTGG 2 cut(s) 364, 760
Bse3DI GCAATG 1 cut(s) 692
BseBI CCWGG 2 cut(s) 317, 400
BseCI ATCGAT 1 cut(s) 329
BseDI CCNNGG 1 cut(s) 303
BseGI GGATG 3 cut(s) 271, 691, 855
BseLI CCNNNNNNNGG 2 cut(s) 262, 484
BseMI GCAATG 1 cut(s) 692
BseMII CTCAG 1 cut(s) 84
BseNI ACTGG 2 cut(s) 364, 760
BseRI GAGGAG 1 cut(s) 839
BseXI GCAGC 1 cut(s) 612
BsgI GTGCAG 1 cut(s) 762
BshFI GGCC 4 cut(s) 40, 98, 141, 579
BshVI ATCGAT 1 cut(s) 329
BsiHKAI GWGCWC 1 cut(s) 367
BsiSI CCGG 2 cut(s) 256, 576
BslI CCNNNNNNNGG 2 cut(s) 262, 484
BsmAI GTCTC 3 cut(s) 488, 619, 847
BsmI GAATGC 2 cut(s) 314, 783
BsnI GGCC 4 cut(s) 40, 98, 141, 579
Bso31I GGTCTC 1 cut(s) 619
Bsp119I TTCGAA 1 cut(s) 552
Bsp1286I GDGCHC 1 cut(s) 367
Bsp143I GATC 4 cut(s) 48, 330, 461, 790
BspACI CCGC 1 cut(s) 346
BspANI GGCC 4 cut(s) 40, 98, 141, 579
BspCNI CTCAG 1 cut(s) 85
BspDI ATCGAT 1 cut(s) 329
BspLI GGNNCC 1 cut(s) 451
BspPI GGATC 1 cut(s) 456
BspT104I TTCGAA 1 cut(s) 552
BspTNI GGTCTC 1 cut(s) 619
BsrDI GCAATG 1 cut(s) 692
BsrI ACTGG 2 cut(s) 364, 760
BssECI CCNNGG 1 cut(s) 303
BssMI GATC 4 cut(s) 48, 330, 461, 790
BssT1I CCWWGG 1 cut(s) 303
Bst2UI CCWGG 2 cut(s) 317, 400
Bst6I CTCTTC 1 cut(s) 478
BstAPI GCANNNNNTGC 1 cut(s) 749
BstBI TTCGAA 1 cut(s) 552
BstC8I GCNNGC 1 cut(s) 781
BstDEI CTNAG 4 cut(s) 93, 134, 202, 818
BstENI CCTNNNNNAGG 1 cut(s) 482
BstF5I GGATG 3 cut(s) 271, 691, 855
BstKTI GATC 4 cut(s) 51, 333, 464, 793
BstMAI GTCTC 3 cut(s) 488, 619, 847
BstMBI GATC 4 cut(s) 48, 330, 461, 790
BstMWI GCNNNNNNNGC 3 cut(s) 287, 343, 749
BstNI CCWGG 2 cut(s) 317, 400
BstNSI RCATGY 1 cut(s) 783
BstSCI CCNGG 2 cut(s) 315, 398
BstV1I GCAGC 1 cut(s) 612
BstV2I GAAGAC 2 cut(s) 81, 804
BstX2I RGATCY 1 cut(s) 461
BstXI CCANNNNNNTGG 1 cut(s) 406
BstYI RGATCY 1 cut(s) 461
Bsu15I ATCGAT 1 cut(s) 329
BsuRI GGCC 4 cut(s) 40, 98, 141, 579
BsuTUI ATCGAT 1 cut(s) 329
BtsCI GGATG 3 cut(s) 271, 691, 855
BtsI GCAGTG 2 cut(s) 552, 557
BtsIMutI CAGTG 2 cut(s) 552, 557
Cac8I GCNNGC 1 cut(s) 781
CaiI CAGNNNCTG 1 cut(s) 603
Cfr13I GGNCC 2 cut(s) 319, 578
ClaI ATCGAT 1 cut(s) 329
CseI GACGC 2 cut(s) 301, 785
CspCI CAANNNNNGTGG 2 cut(s) 118, 153
CviAII CATG 3 cut(s) 155, 334, 780
DdeI CTNAG 4 cut(s) 93, 134, 202, 818
DpnI GATC 4 cut(s) 50, 332, 463, 792
DpnII GATC 4 cut(s) 48, 330, 461, 790
Eam1104I CTCTTC 1 cut(s) 478
EarI CTCTTC 1 cut(s) 478
Ecl136II GAGCTC 1 cut(s) 365
Eco130I CCWWGG 1 cut(s) 303
Eco24I GRGCYC 1 cut(s) 367
Eco31I GGTCTC 1 cut(s) 619
Eco47I GGWCC 1 cut(s) 319
Eco53kI GAGCTC 1 cut(s) 365
Eco57I CTGAAG 1 cut(s) 161
EcoICRI GAGCTC 1 cut(s) 365
EcoNI CCTNNNNNAGG 1 cut(s) 482
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 2 cut(s) 315, 398
EcoT14I CCWWGG 1 cut(s) 303
EcoT22I ATGCAT 1 cut(s) 785
EcoT38I GRGCYC 1 cut(s) 367
ErhI CCWWGG 1 cut(s) 303
FaeI CATG 3 cut(s) 158, 337, 783
FaiI YATR 6 cut(s) 12, 124, 156, 335, 434, 781
FatI CATG 3 cut(s) 154, 333, 779
FauI CCCGC 1 cut(s) 339
Fnu4HI GCNGC 1 cut(s) 601
FokI GGATG 3 cut(s) 278, 698, 842
FriOI GRGCYC 1 cut(s) 367
Fsp4HI GCNGC 1 cut(s) 601
FspBI CTAG 3 cut(s) 36, 806, 868
GluI GCNGC 1 cut(s) 601
GsuI CTGGAG 2 cut(s) 381, 382
HaeIII GGCC 4 cut(s) 40, 98, 141, 579
HapII CCGG 2 cut(s) 256, 576
HgaI GACGC 2 cut(s) 301, 785
Hin1II CATG 3 cut(s) 158, 337, 783
HinfI GANTC 4 cut(s) 158, 439, 554, 840
HpaII CCGG 2 cut(s) 256, 576
HphI GGTGA 2 cut(s) 365, 421
Hpy166II GTNNAC 1 cut(s) 667
Hpy188I TCNGA 1 cut(s) 94
Hpy188III TCNNGA 2 cut(s) 788, 794
Hpy8I GTNNAC 1 cut(s) 667
HpyAV CCTTC 4 cut(s) 332, 336, 478, 577
HpyCH4V TGCA 9 cut(s) 126, 154, 298, 628, 677, 697, 743, 752, 783
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 343, 749
HpyF3I CTNAG 4 cut(s) 93, 134, 202, 818
Hsp92II CATG 3 cut(s) 158, 337, 783
Kzo9I GATC 4 cut(s) 48, 330, 461, 790
LmnI GCTCC 1 cut(s) 362
Lsp1109I GCAGC 1 cut(s) 612
LweI GCATC 3 cut(s) 277, 615, 676
MaeI CTAG 3 cut(s) 36, 806, 868
MaeIII GTNAC 2 cut(s) 535, 699
MalI GATC 4 cut(s) 50, 332, 463, 792
MboI GATC 4 cut(s) 48, 330, 461, 790
MflI RGATCY 1 cut(s) 461
MhlI GDGCHC 1 cut(s) 367
MluCI AATT 1 cut(s) 671
MlyI GAGTC 1 cut(s) 849
MmeI TCCRAC 2 cut(s) 243, 744
Mph1103I ATGCAT 1 cut(s) 785
MseI TTAA 1 cut(s) 392
MslI CAYNNNNRTG 1 cut(s) 121
MspA1I CMGCKG 1 cut(s) 603
MspI CCGG 2 cut(s) 256, 576
MspR9I CCNGG 2 cut(s) 317, 400
Mva1269I GAATGC 2 cut(s) 314, 783
MvaI CCWGG 2 cut(s) 317, 400
MwoI GCNNNNNNNGC 3 cut(s) 287, 343, 749
NdeII GATC 4 cut(s) 48, 330, 461, 790
NlaIII CATG 3 cut(s) 158, 337, 783
NlaIV GGNNCC 1 cut(s) 451
NmuCI GTSAC 2 cut(s) 535, 699
NsiI ATGCAT 1 cut(s) 785
NspI RCATGY 1 cut(s) 783
NspV TTCGAA 1 cut(s) 552
PaeI GCATGC 1 cut(s) 783
PcsI WCGNNNNNNNCGW 1 cut(s) 549
PctI GAATGC 2 cut(s) 314, 783
PfeI GAWTC 3 cut(s) 158, 439, 554
PfoI TCCNGGA 2 cut(s) 315, 398
PkrI GCNGC 1 cut(s) 602
PleI GAGTC 1 cut(s) 848
PpsI GAGTC 1 cut(s) 848
PpuMI RGGWCCY 1 cut(s) 319
Psp124BI GAGCTC 1 cut(s) 367
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 2 cut(s) 315, 398
PspGI CCWGG 2 cut(s) 315, 398
PspN4I GGNNCC 1 cut(s) 451
PspPI GGNCC 2 cut(s) 319, 578
PspPPI RGGWCCY 1 cut(s) 319
PstNI CAGNNNCTG 1 cut(s) 603
PsuI RGATCY 1 cut(s) 461
PvuII CAGCTG 1 cut(s) 603
RseI CAYNNNNRTG 1 cut(s) 121
SacI GAGCTC 1 cut(s) 367
SaqAI TTAA 1 cut(s) 392
SatI GCNGC 1 cut(s) 601
Sau3AI GATC 4 cut(s) 48, 330, 461, 790
Sau96I GGNCC 2 cut(s) 319, 578
SchI GAGTC 1 cut(s) 849
ScrFI CCNGG 2 cut(s) 317, 400
SduI GDGCHC 1 cut(s) 367
SfaNI GCATC 3 cut(s) 277, 615, 676
SfuI TTCGAA 1 cut(s) 552
SinI GGWCC 1 cut(s) 319
SmiMI CAYNNNNRTG 1 cut(s) 121
SmlI CTYRAG 1 cut(s) 443
SmoI CTYRAG 1 cut(s) 443
SphI GCATGC 1 cut(s) 783
Sse9I AATT 1 cut(s) 671
SsiI CCGC 1 cut(s) 346
SspI AATATT 1 cut(s) 389
SspMI CTAG 3 cut(s) 36, 806, 868
SstI GAGCTC 1 cut(s) 367
StyD4I CCNGG 2 cut(s) 315, 398
StyI CCWWGG 1 cut(s) 303
TaqI TCGA 2 cut(s) 329, 552
TasI AATT 1 cut(s) 671
TfiI GAWTC 3 cut(s) 158, 439, 554
Tru1I TTAA 1 cut(s) 392
Tru9I TTAA 1 cut(s) 392
TscAI CASTG 2 cut(s) 552, 564
TseFI GTSAC 2 cut(s) 535, 699
TseI GCWGC 1 cut(s) 600
Tsp45I GTSAC 2 cut(s) 535, 699
TspDTI ATGAA 5 cut(s) 81, 102, 449, 559, 681
TspGWI ACGGA 1 cut(s) 816
TspRI CASTG 2 cut(s) 552, 564
VpaK11BI GGWCC 1 cut(s) 319
XagI CCTNNNNNAGG 1 cut(s) 482
XapI RAATTY 1 cut(s) 671
XceI RCATGY 1 cut(s) 783
XcmI CCANNNNNNNNNTGG 1 cut(s) 600
XspI CTAG 3 cut(s) 36, 806, 868
Zsp2I ATGCAT 1 cut(s) 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.