Prupe.8G175400_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000199
Physical Location & Seq
Reverse (-)
17802690 .. 17803550
861 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G175400.1

Sequence Viewer

Length: 861 bp
ATGGCTTCCTTCCATGCTCGCTCAAACAGCTTGCCTTCAACATCACATCCTTTCGTTACAGAATTTGATGAGAAGTTGTGCAGATTGAAGGCATCAGAAACCGCCTCTTCATCATCATCATCCATAAGCCACAAACTCAGTGGCCTTCAAGATTTGCATGAGTGTGTTGAGAAGTTTCTTCTCTTGCCATTCAGTCAACAAGCCTTAGCCCAGGAGTGTGGAGACAAAGGGATCAATGAACTATTCGATGGATCTTTGAGGCTCCTGGATGTGTGTGGCATCATTAAGGACGCCCTTTTACAAACAAAGGAATGCACACATGAACTTCAATCAATCATGCGCAGAAGACGAGGAGGTGACATGAGCTTCATGAGTGAGTTTAGGAAATACCTTGCATCTAGGAAGGATGTCAAGAAGTCAATGAACAAGGCCTTAAAGGTCAAGGAAAGTAAGTGCAAAGACAAGAACCATGAGACTCCAGCAGTTGTCAACATGTTGAAAGAGTTAGATGCAGTCACCGGCACTGTGTTTGAATCCTTGGTCTCCTTCATAGCTGGTTCAAATTTGAGATCAAAATCAAGCTCTTGGTCATTAGTTTCCAAGCTGGTGCAGCCTAAAAGAGTAGCTTGTGAGGGTGAGGAAGCTGCGGATACGAATGAACTTGAGAAGGTGGATGCTGCATTGCACTCCCTTATCAGTCACAAGTCAAGCAGATCTGGTTGTGCAGCGCAAGCCGAGAATCTGCAAAATTTGCTCCAAGAATTGGAGGCAAACATTCAAGACATTGAAGAAGGACTTGAGTGCTTGTTTAGGCGCTTGATCAAAGCCAGAGTCTCTCTTCTCAACATATTCAACCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

287

Amino Acids

31.79

Weight (kDa)

7.59

Isoelectric Point (pI)

65.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000199)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17043 AT2G17070 AT2G17080 AT4G35200 AT4G35210
fragaria_vesca FvH4_2g16200 FvH4_2g16201 FvH4_2g16202 FvH4_2g16203 FvH4_2g16204 FvH4_2g16205 FvH4_2g16220 FvH4_2g16230 FvH4_2g16240 FvH4_2g16270 FvH4_2g16280 FvH4_2g16290 FvH4_2g16310 FvH4_2g16311 FvH4_2g16313
malus_domestica MD02G1121100.v1.1 MD05G1130600.v1.1 MD05G1130700.v1.1 MD05G1130800.v1.1 MD05G1131000.v1.1 MD05G1131200.v1.1 MD10G1133600.v1.1 MD10G1134000.v1.1 MD10G1134100.v1.1 MD10G1134300.v1.1 MD12G1141200.v1.1
prunus_persica Prupe.2G076800_v2.0.a1 Prupe.2G142500_v2.0.a1 Prupe.2G142900_v2.0.a1 Prupe.8G175000_v2.0.a1 Prupe.8G175200_v2.0.a1 Prupe.8G175300_v2.0.a1 Prupe.8G175400_v2.0.a1 Prupe.8G175600_v2.0.a1 Prupe.8G175700_v2.0.a1 Prupe.8G175800_v2.0.a1 Prupe.8G175900_v2.0.a1 Prupe.8G176000_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0358831 RchiOBHm_Chr6g0279881 RchiOBHm_Chr6g0279891 RchiOBHm_Chr6g0279901 RchiOBHm_Chr6g0279931 RchiOBHm_Chr6g0279941 RchiOBHm_Chr6g0280051 RchiOBHm_Chr6g0280061 RchiOBHm_Chr6g0280071
rosa_laevigata RLG00000002309 RLG00000013093 RLG00000013094 RLG00000013099 RLG00000013104 RLG00000013106 RLG00000013107 RLG00000013109 RLG00000013110 RLG00000013111
rosa_multiflora Rmu_co8441615.1_g000001 Rmu_co8465321.1_g000001 Rmu_co8495701.1_g000001 Rmu_sc0002340.1_g000003 Rmu_sc0002504.1_g000006 Rmu_sc0002504.1_g000007 Rmu_sc0002504.1_g000017 Rmu_sc0002504.1_g000018 Rmu_sc0004617.1_g000019 Rmu_sc0008097.1_g000001 Rmu_sc0010352.1_g000001
rosa_roxburghii Rroxscaffold_6G00396480 Rroxscaffold_7G00188440 Rroxscaffold_7G00188450 Rroxscaffold_7G00188460 Rroxscaffold_7G00188470 Rroxscaffold_7G00188480 Rroxscaffold_7G00188490 Rroxscaffold_7G00188530 Rroxscaffold_7G00188540 Rroxscaffold_7G00188550
rosa_rugosa Rorug05G0490200.1 Rorug06G0128800 Rorug06G0128800 Rorug06G0128800 Rorug06G0128900 Rorug06G0128900 Rorug06G0129000 Rorug06G0129100 Rorug06G0129700 Rorug06G0129800 Rorug06G0129900
rosa_samantha Rh5AG427100 Rh6AG237500 Rh6AG237600 Rh6AG237700 Rh6AG237800 Rh6AG237900 Rh6AG238100 Rh6AG238200 Rh6AG238300 Rh6AG238700 Rh6AG238800 Rh6AG239100 Rh6AG239600 Rh6BG241600 Rh6BG241700 Rh6BG241800 Rh6BG241900 Rh6BG242100 Rh6BG242300 Rh6BG242400 Rh6BG243200 Rh6BG243500 Rh6BG243600 Rh6BG243700 Rh6CG243800 Rh6CG243900 Rh6CG244000 Rh6CG244100 Rh6CG244300 Rh6CG244400 Rh6CG245100 Rh6CG245300 Rh6CG245400 Rh6DG234600 Rh6DG234700 Rh6DG234800 Rh6DG234900 Rh6DG235000 Rh6DG235100 Rh6DG236000 Rh6DG236200 Rh6DG236300
rosa_wichuraiana Rw3G023160 Rw4G032750 Rw6G020650 Rw6G020660 Rw6G020680 Rw6G020690 Rw6G020710 Rw6G020750 Rw6G020760 Rw6G020770 Rw6G020780 Rw6G020790 Rw6G020800 Rw6G020810 Rw6G020860 Rw6G020900 Rw6G020910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 341
AccB7I CCANNNNNTGG 1 cut(s) 763
AciI CCGC 2 cut(s) 102, 647
AclWI GGATC 2 cut(s) 239, 259
AcsI RAATTY 3 cut(s) 62, 562, 748
AcyI GRCGYC 1 cut(s) 291
AfiI CCNNNNNNNGG 1 cut(s) 763
AflIII ACRYGT 1 cut(s) 492
AjnI CCWGG 2 cut(s) 210, 264
AluBI AGCT 7 cut(s) 30, 366, 554, 582, 604, 626, 644
AluI AGCT 7 cut(s) 30, 366, 554, 582, 604, 626, 644
Alw26I GTCTC 4 cut(s) 216, 467, 547, 838
AlwI GGATC 2 cut(s) 239, 259
AoxI GGCC 2 cut(s) 142, 429
ApeKI GCWGC 4 cut(s) 610, 644, 677, 725
ApoI RAATTY 3 cut(s) 62, 562, 748
ArsI GACNNNNNNTTYG 2 cut(s) 816, 848
AspLEI GCGC 3 cut(s) 342, 730, 816
AsuHPI GGTGA 3 cut(s) 368, 508, 647
BbsI GAAGAC 1 cut(s) 352
BbvI GCAGC 4 cut(s) 622, 631, 664, 737
BccI CCATC 1 cut(s) 242
BciT130I CCWGG 2 cut(s) 212, 266
BciVI GTATCC 1 cut(s) 643
BclI TGATCA 1 cut(s) 819
BcoDI GTCTC 4 cut(s) 216, 467, 547, 838
BfaI CTAG 1 cut(s) 399
BfoI RGCGCY 1 cut(s) 817
BfuI GTATCC 1 cut(s) 643
BglII AGATCT 1 cut(s) 713
BisI GCNGC 4 cut(s) 611, 645, 678, 726
BlsI GCNGC 4 cut(s) 612, 646, 679, 727
Bme1390I CCNGG 2 cut(s) 212, 266
BmiI GGNNCC 1 cut(s) 263
BmrFI CCNGG 2 cut(s) 212, 266
BmsI GCATC 5 cut(s) 101, 288, 404, 499, 664
BpiI GAAGAC 1 cut(s) 352
BpmI CTGGAG 1 cut(s) 462
Bpu10I CCTNAGC 1 cut(s) 205
BpuEI CTTGAG 2 cut(s) 683, 818
BsaBI GATNNNNATC 1 cut(s) 574
BsaHI GRCGYC 1 cut(s) 291
BsaI GGTCTC 1 cut(s) 547
BsaJI CCNNGG 2 cut(s) 210, 537
Bsc4I CCNNNNNNNGG 1 cut(s) 763
Bse118I RCCGGY 1 cut(s) 518
Bse3DI GCAATG 1 cut(s) 680
Bse8I GATNNNNATC 1 cut(s) 574
BseBI CCWGG 2 cut(s) 212, 266
BseDI CCNNGG 2 cut(s) 210, 537
BseGI GGATG 5 cut(s) 46, 119, 274, 412, 679
BseJI GATNNNNATC 1 cut(s) 574
BseLI CCNNNNNNNGG 1 cut(s) 763
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 366
BseXI GCAGC 4 cut(s) 622, 631, 664, 737
BsgI GTGCAG 3 cut(s) 100, 629, 744
BshFI GGCC 2 cut(s) 144, 431
BsiSI CCGG 1 cut(s) 519
BslI CCNNNNNNNGG 1 cut(s) 763
BsmAI GTCTC 4 cut(s) 216, 467, 547, 838
BsmI GAATGC 1 cut(s) 317
BsnI GGCC 2 cut(s) 144, 431
Bso31I GGTCTC 1 cut(s) 547
Bsp143I GATC 5 cut(s) 231, 251, 569, 713, 819
BspACI CCGC 2 cut(s) 102, 647
BspANI GGCC 2 cut(s) 144, 431
BspCNI CTCAG 1 cut(s) 150
BspHI TCATGA 1 cut(s) 369
BspLI GGNNCC 1 cut(s) 263
BspPI GGATC 2 cut(s) 239, 259
BspTNI GGTCTC 1 cut(s) 547
BsrDI GCAATG 1 cut(s) 680
BsrFI RCCGGY 1 cut(s) 518
BssAI RCCGGY 1 cut(s) 518
BssECI CCNNGG 2 cut(s) 210, 537
BssMI GATC 5 cut(s) 231, 251, 569, 713, 819
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 1 cut(s) 537
Bst2UI CCWGG 2 cut(s) 212, 266
Bst4CI ACNGT 1 cut(s) 526
Bst6I CTCTTC 2 cut(s) 112, 843
BstACI GRCGYC 1 cut(s) 291
BstAPI GCANNNNNTGC 1 cut(s) 751
BstC8I GCNNGC 3 cut(s) 19, 32, 732
BstDEI CTNAG 2 cut(s) 137, 205
BstF5I GGATG 5 cut(s) 46, 119, 274, 412, 679
BstH2I RGCGCY 1 cut(s) 817
BstHHI GCGC 3 cut(s) 342, 730, 816
BstKTI GATC 5 cut(s) 234, 254, 572, 716, 822
BstMAI GTCTC 4 cut(s) 216, 467, 547, 838
BstMBI GATC 5 cut(s) 231, 251, 569, 713, 819
BstMWI GCNNNNNNNGC 4 cut(s) 27, 610, 731, 751
BstNI CCWGG 2 cut(s) 212, 266
BstNSI RCATGY 1 cut(s) 496
BstSCI CCNGG 2 cut(s) 210, 264
BstV1I GCAGC 4 cut(s) 622, 631, 664, 737
BstV2I GAAGAC 1 cut(s) 352
BstX2I RGATCY 2 cut(s) 251, 713
BstXI CCANNNNNNTGG 1 cut(s) 218
BstYI RGATCY 2 cut(s) 251, 713
BsuI GTATCC 1 cut(s) 643
BsuRI GGCC 2 cut(s) 144, 431
BtsCI GGATG 5 cut(s) 46, 119, 274, 412, 679
BtsIMutI CAGTG 2 cut(s) 145, 522
Cac8I GCNNGC 3 cut(s) 19, 32, 732
CciI TCATGA 1 cut(s) 369
CfoI GCGC 3 cut(s) 342, 730, 816
Cfr10I RCCGGY 1 cut(s) 518
CseI GACGC 1 cut(s) 299
CspCI CAANNNNNGTGG 2 cut(s) 121, 156
CviAII CATG 8 cut(s) 14, 158, 320, 337, 361, 370, 470, 493
DdeI CTNAG 2 cut(s) 137, 205
DpnI GATC 5 cut(s) 233, 253, 571, 715, 821
DpnII GATC 5 cut(s) 231, 251, 569, 713, 819
Eam1104I CTCTTC 2 cut(s) 112, 843
EarI CTCTTC 2 cut(s) 112, 843
Eco130I CCWWGG 1 cut(s) 537
Eco147I AGGCCT 1 cut(s) 431
Eco31I GGTCTC 1 cut(s) 547
EcoRII CCWGG 2 cut(s) 210, 264
EcoT14I CCWWGG 1 cut(s) 537
ErhI CCWWGG 1 cut(s) 537
FaeI CATG 8 cut(s) 17, 161, 323, 340, 364, 373, 473, 496
FalI AAGNNNNNCTT 4 cut(s) 610, 642, 780, 812
FatI CATG 8 cut(s) 13, 157, 319, 336, 360, 369, 469, 492
FbaI TGATCA 1 cut(s) 819
Fnu4HI GCNGC 4 cut(s) 611, 645, 678, 726
FokI GGATG 5 cut(s) 33, 106, 281, 419, 686
Fsp4HI GCNGC 4 cut(s) 611, 645, 678, 726
FspBI CTAG 1 cut(s) 399
FspI TGCGCA 1 cut(s) 341
GlaI GCGC 3 cut(s) 341, 729, 815
GluI GCNGC 4 cut(s) 611, 645, 678, 726
GsuI CTGGAG 1 cut(s) 462
HaeII RGCGCY 1 cut(s) 817
HaeIII GGCC 2 cut(s) 144, 431
HapII CCGG 1 cut(s) 519
HgaI GACGC 1 cut(s) 299
HhaI GCGC 3 cut(s) 342, 730, 816
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 8 cut(s) 17, 161, 323, 340, 364, 373, 473, 496
Hin6I GCGC 3 cut(s) 340, 728, 814
HinP1I GCGC 3 cut(s) 340, 728, 814
HincII GTYRAC 2 cut(s) 197, 490
HindII GTYRAC 2 cut(s) 197, 490
HinfI GANTC 4 cut(s) 475, 533, 739, 831
HpaII CCGG 1 cut(s) 519
HphI GGTGA 3 cut(s) 368, 508, 647
Hpy166II GTNNAC 2 cut(s) 197, 490
Hpy188I TCNGA 1 cut(s) 97
Hpy188III TCNNGA 4 cut(s) 149, 370, 412, 779
Hpy8I GTNNAC 2 cut(s) 197, 490
HpyAV CCTTC 8 cut(s) 19, 45, 82, 155, 397, 556, 661, 785
HpyCH4III ACNGT 1 cut(s) 526
HpyF10VI GCNNNNNNNGC 4 cut(s) 27, 610, 731, 751
HpyF3I CTNAG 2 cut(s) 137, 205
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 8 cut(s) 17, 161, 323, 340, 364, 373, 473, 496
HspAI GCGC 3 cut(s) 340, 728, 814
Ksp22I TGATCA 1 cut(s) 819
Kzo9I GATC 5 cut(s) 231, 251, 569, 713, 819
LmnI GCTCC 2 cut(s) 267, 759
Lsp1109I GCAGC 4 cut(s) 622, 631, 664, 737
LweI GCATC 5 cut(s) 101, 288, 404, 499, 664
MaeI CTAG 1 cut(s) 399
MaeIII GTNAC 4 cut(s) 55, 356, 514, 698
MalI GATC 5 cut(s) 233, 253, 571, 715, 821
MboI GATC 5 cut(s) 231, 251, 569, 713, 819
MboII GAAGA 5 cut(s) 99, 170, 357, 800, 830
MflI RGATCY 2 cut(s) 251, 713
MluCI AATT 4 cut(s) 62, 562, 748, 761
MlyI GAGTC 2 cut(s) 469, 840
MnlI CCTC 7 cut(s) 115, 252, 344, 347, 625, 631, 760
MseI TTAA 2 cut(s) 285, 434
MslI CAYNNNNRTG 1 cut(s) 162
MspI CCGG 1 cut(s) 519
MspR9I CCNGG 2 cut(s) 212, 266
Mva1269I GAATGC 1 cut(s) 317
MvaI CCWGG 2 cut(s) 212, 266
MwoI GCNNNNNNNGC 4 cut(s) 27, 610, 731, 751
NdeII GATC 5 cut(s) 231, 251, 569, 713, 819
NlaIII CATG 8 cut(s) 17, 161, 323, 340, 364, 373, 473, 496
NlaIV GGNNCC 1 cut(s) 263
NmeAIII GCCGAG 1 cut(s) 760
NmuCI GTSAC 3 cut(s) 356, 514, 698
NsbI TGCGCA 1 cut(s) 341
NspI RCATGY 1 cut(s) 496
PagI TCATGA 1 cut(s) 369
PceI AGGCCT 1 cut(s) 431
PciI ACATGT 1 cut(s) 492
PctI GAATGC 1 cut(s) 317
PfeI GAWTC 2 cut(s) 533, 739
PflMI CCANNNNNTGG 1 cut(s) 763
PfoI TCCNGGA 1 cut(s) 264
PkrI GCNGC 4 cut(s) 612, 646, 679, 727
PleI GAGTC 2 cut(s) 469, 839
PpsI GAGTC 2 cut(s) 469, 839
PscI ACATGT 1 cut(s) 492
Psp6I CCWGG 2 cut(s) 210, 264
PspGI CCWGG 2 cut(s) 210, 264
PspN4I GGNNCC 1 cut(s) 263
PsuI RGATCY 2 cut(s) 251, 713
RseI CAYNNNNRTG 1 cut(s) 162
SaqAI TTAA 2 cut(s) 285, 434
SatI GCNGC 4 cut(s) 611, 645, 678, 726
Sau3AI GATC 5 cut(s) 231, 251, 569, 713, 819
SchI GAGTC 2 cut(s) 469, 840
ScrFI CCNGG 2 cut(s) 212, 266
SfaNI GCATC 5 cut(s) 101, 288, 404, 499, 664
SmiMI CAYNNNNRTG 1 cut(s) 162
SmlI CTYRAG 2 cut(s) 662, 797
SmoI CTYRAG 2 cut(s) 662, 797
Sse9I AATT 4 cut(s) 62, 562, 748, 761
SseBI AGGCCT 1 cut(s) 431
SsiI CCGC 2 cut(s) 102, 647
SspMI CTAG 1 cut(s) 399
StuI AGGCCT 1 cut(s) 431
StyD4I CCNGG 2 cut(s) 210, 264
StyI CCWWGG 1 cut(s) 537
TaaI ACNGT 1 cut(s) 526
TaqI TCGA 1 cut(s) 246
TasI AATT 4 cut(s) 62, 562, 748, 761
TfiI GAWTC 2 cut(s) 533, 739
Tru1I TTAA 2 cut(s) 285, 434
Tru9I TTAA 2 cut(s) 285, 434
TscAI CASTG 2 cut(s) 145, 529
TseFI GTSAC 3 cut(s) 356, 514, 698
TseI GCWGC 4 cut(s) 610, 644, 677, 725
Tsp45I GTSAC 3 cut(s) 356, 514, 698
TspDTI ATGAA 7 cut(s) 99, 252, 336, 358, 437, 538, 672
TspRI CASTG 2 cut(s) 145, 529
Van91I CCANNNNNTGG 1 cut(s) 763
XapI RAATTY 3 cut(s) 62, 562, 748
XceI RCATGY 1 cut(s) 496
XcmI CCANNNNNNNNNTGG 1 cut(s) 137
XspI CTAG 1 cut(s) 399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.