pycom854g00050

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00000854
OG0000131
Physical Location & Seq
Reverse (-)
52452 .. 53744
1293 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1293 bp
ATGGAAGGAAGCAAAGAAGCTCCACATGACGTCGAAAACCCTCATATTCAGTTAGTAACTTCAATGCGTGAGGAGTTGAATGGTTTGACTCCCTTGTCTGATTCGTGTTGTATCTACAAAGTTCCTGAAGTACTACGGTGTGTAAATGAAAAGGCCTACACACCTCGAGCAGTCTCTATAGGTCCGATTCACCATGGCAAGGAAGGCTTAGAAGACATGGAAGAACACAAGATGAGGTACCTGCAGTATTTTTTAGATCGGACTGGGGTCGGCTTGGAAGATTATGTAAAGAAACTAAAGGGCAAGGAAGCGGAACTGCGCAGTTGCTATGCGCACCCCATTGAGTTGTGCAGTGATAAATTTGTAAGAATCATTCTTGTGGATGCCGCGTTCATCATTGAGCTCTTATTGAGGTACAAGGGGCATGTCAAGCCAGATAGCCATGACCGCATCTTTAACAAACCATGGTTGAGAATGTATGTAGAACCTGACATGCTTTTGCTTGAAAATCAGCTACCATTTTTCATTCTTGAGGATCTCTTTGCCACTGCGGAGGTGCCCGCGACGATGCCTTCAGTATTTGACCTCTCTTACACCTTCTGCGAGCAATCAACGAGTTTGTATGTGAAAAGAGAATATTCGGGATCTTCTTCTAGTTTTGAAGTCAAGCATTTTGTTGATTTGATTAGAACTTTAAATCTGCCAACGGAGGAAGAGAACTCAAAAAATCGAGGGTCATTCGACACTCTAGCTGTACCCAGCATGACGAAACTGCACCAGGCTGGTGTCAAGTTTAAGACAAGATCAAGCAAGAATCTATTTGATATATGTTTCACTGATAAAGGCGGAAAATTGGAAATTCCAATTATAATGATAGGGGATAGCACAGAGCTTATACTCCGAAACCTTATTGCCTTTGAGCAATGCCATTGCACTCCGAATACATGCTACTTTAATGATTATATCATCCTCATGGATAATTTTGTGAACACCCCAAATGATGTGGAATTGCTTGTCAAGAATGGAATTGTTGAAAATATGCTTGGTGACAACAATGAGGTGTCTACTCTGTTTAACAGCCTTGGCAAAGGTGTTGCGGTGTCCAGACAAGGATTCTATTTTGCTCCTCTTACAAAGGACCTCAACAAGTACTACAAAAAGCCGTGGAACAAATGGAAGGCAGATCTGAAACAAAAATATTTCAACACACCTTGGACAATTATTTCAGTCATTGCTGCTACTTTTCTCATCATACTCACTCTCATACAAACGGTGTGGTCTATTGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

431

Amino Acids

49.28

Weight (kDa)

6.04

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 38 - 419 1.5e-123 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 869
AasI GACNNNNNNGTC 1 cut(s) 94
AatII GACGTC 1 cut(s) 33
Acc16I TGCGCA 2 cut(s) 320, 333
Acc36I ACCTGC 1 cut(s) 249
Acc65I GGTACC 1 cut(s) 237
AccB1I GGYRCC 2 cut(s) 237, 556
AccI GTMKAC 1 cut(s) 1064
AccII CGCG 2 cut(s) 389, 563
AciI CCGC 7 cut(s) 311, 387, 448, 551, 561, 846, 1097
AclWI GGATC 2 cut(s) 543, 652
AcsI RAATTY 2 cut(s) 359, 858
AcuI CTGAAG 2 cut(s) 147, 558
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 5 cut(s) 132, 239, 416, 756, 1151
AfiI CCNNNNNNNGG 1 cut(s) 199
AgsI TTSAA 6 cut(s) 63, 79, 506, 662, 1034, 1204
AjnI CCWGG 1 cut(s) 777
AjuI GAANNNNNNNTTGG 2 cut(s) 1026, 1058
AloI GAACNNNNNNTCC 2 cut(s) 374, 406
AluBI AGCT 5 cut(s) 20, 403, 514, 752, 892
AluI AGCT 5 cut(s) 20, 403, 514, 752, 892
Alw21I GWGCWC 1 cut(s) 405
Alw26I GTCTC 1 cut(s) 178
AlwI GGATC 2 cut(s) 543, 652
Ama87I CYCGRG 1 cut(s) 165
AoxI GGCC 1 cut(s) 153
ApeKI GCWGC 1 cut(s) 1235
ApoI RAATTY 2 cut(s) 359, 858
Asp718I GGTACC 1 cut(s) 237
AspLEI GCGC 2 cut(s) 321, 334
AspS9I GGNCC 2 cut(s) 182, 1138
AsuHPI GGTGA 2 cut(s) 182, 1058
AvaI CYCGRG 1 cut(s) 165
AvaII GGWCC 2 cut(s) 182, 1138
BaeGI GKGCMC 1 cut(s) 561
BanI GGYRCC 2 cut(s) 237, 556
BanII GRGCYC 1 cut(s) 405
BbsI GAAGAC 1 cut(s) 219
Bbv12I GWGCWC 1 cut(s) 405
BbvI GCAGC 1 cut(s) 1222
BceAI ACGGC 1 cut(s) 1147
BciT130I CCWGG 1 cut(s) 779
BcoDI GTCTC 1 cut(s) 178
BfaI CTAG 2 cut(s) 654, 749
BfmI CTRYAG 2 cut(s) 177, 242
BfuAI ACCTGC 1 cut(s) 249
BglII AGATCT 1 cut(s) 1183
BisI GCNGC 2 cut(s) 387, 1236
BlsI GCNGC 2 cut(s) 388, 1237
BmcAI AGTACT 2 cut(s) 132, 1151
Bme1390I CCNGG 1 cut(s) 779
Bme18I GGWCC 2 cut(s) 182, 1138
BmeT110I CYCGRG 1 cut(s) 165
BmgT120I GGNCC 2 cut(s) 182, 1138
BmiI GGNNCC 2 cut(s) 239, 558
BmrFI CCNGG 1 cut(s) 779
BmrI ACTGGG 1 cut(s) 273
BmsI GCATC 3 cut(s) 373, 459, 558
BmuI ACTGGG 1 cut(s) 273
BoxI GACNNNNGTC 1 cut(s) 266
BpiI GAAGAC 1 cut(s) 219
BpuEI CTTGAG 1 cut(s) 551
BsaHI GRCGYC 1 cut(s) 30
BsaJI CCNNGG 5 cut(s) 193, 464, 1081, 1163, 1211
Bsc4I CCNNNNNNNGG 1 cut(s) 199
Bse1I ACTGG 1 cut(s) 268
Bse3DI GCAATG 3 cut(s) 928, 929, 1230
BseBI CCWGG 1 cut(s) 779
BseDI CCNNGG 5 cut(s) 193, 464, 1081, 1163, 1211
BseGI GGATG 2 cut(s) 388, 966
BseLI CCNNNNNNNGG 1 cut(s) 199
BseMI GCAATG 3 cut(s) 928, 929, 1230
BseNI ACTGG 1 cut(s) 268
BseRI GAGGAG 2 cut(s) 86, 1116
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 1 cut(s) 1222
BseYI CCCAGC 1 cut(s) 758
BsgI GTGCAG 2 cut(s) 370, 758
Bsh1236I CGCG 2 cut(s) 389, 563
BshFI GGCC 1 cut(s) 155
BshNI GGYRCC 2 cut(s) 237, 556
BsiHKAI GWGCWC 1 cut(s) 405
BsiHKCI CYCGRG 1 cut(s) 165
BslI CCNNNNNNNGG 1 cut(s) 199
BsmAI GTCTC 1 cut(s) 178
BsnI GGCC 1 cut(s) 155
BsoBI CYCGRG 1 cut(s) 165
Bsp1286I GDGCHC 2 cut(s) 405, 561
Bsp143I GATC 5 cut(s) 256, 535, 644, 803, 1183
Bsp19I CCATGG 2 cut(s) 193, 464
BspACI CCGC 7 cut(s) 311, 387, 448, 551, 561, 846, 1097
BspANI GGCC 1 cut(s) 155
BspFNI CGCG 2 cut(s) 389, 563
BspLI GGNNCC 2 cut(s) 239, 558
BspMAI CTGCAG 1 cut(s) 246
BspMI ACCTGC 1 cut(s) 249
BspPI GGATC 2 cut(s) 543, 652
BspT107I GGYRCC 2 cut(s) 237, 556
BsrDI GCAATG 3 cut(s) 928, 929, 1230
BsrI ACTGG 1 cut(s) 268
BssECI CCNNGG 5 cut(s) 193, 464, 1081, 1163, 1211
BssMI GATC 5 cut(s) 256, 535, 644, 803, 1183
BssNI GRCGYC 1 cut(s) 30
BssT1I CCWWGG 4 cut(s) 193, 464, 1081, 1211
Bst2UI CCWGG 1 cut(s) 779
Bst4CI ACNGT 2 cut(s) 138, 1273
Bst6I CTCTTC 1 cut(s) 708
BstACI GRCGYC 1 cut(s) 30
BstC8I GCNNGC 3 cut(s) 561, 605, 1288
BstDEI CTNAG 1 cut(s) 208
BstDSI CCRYGG 3 cut(s) 193, 464, 1163
BstF5I GGATG 2 cut(s) 388, 966
BstFNI CGCG 2 cut(s) 389, 563
BstHHI GCGC 2 cut(s) 321, 334
BstKTI GATC 5 cut(s) 259, 538, 647, 806, 1186
BstMAI GTCTC 1 cut(s) 178
BstMBI GATC 5 cut(s) 256, 535, 644, 803, 1183
BstMWI GCNNNNNNNGC 3 cut(s) 204, 430, 447
BstNI CCWGG 1 cut(s) 779
BstNSI RCATGY 3 cut(s) 428, 496, 948
BstPAI GACNNNNGTC 1 cut(s) 266
BstSCI CCNGG 1 cut(s) 777
BstSFI CTRYAG 2 cut(s) 177, 242
BstSLI GKGCMC 1 cut(s) 561
BstUI CGCG 2 cut(s) 389, 563
BstV1I GCAGC 1 cut(s) 1222
BstV2I GAAGAC 1 cut(s) 219
BstX2I RGATCY 3 cut(s) 535, 644, 1183
BstYI RGATCY 3 cut(s) 535, 644, 1183
BsuRI GGCC 1 cut(s) 155
BtgI CCRYGG 3 cut(s) 193, 464, 1163
BtsCI GGATG 2 cut(s) 388, 966
BtsI GCAGTG 2 cut(s) 358, 546
BtsIMutI CAGTG 3 cut(s) 358, 546, 834
BveI ACCTGC 1 cut(s) 249
Cac8I GCNNGC 3 cut(s) 561, 605, 1288
CfoI GCGC 2 cut(s) 321, 334
Cfr13I GGNCC 2 cut(s) 182, 1138
Csp6I GTAC 5 cut(s) 131, 238, 415, 755, 1150
CspCI CAANNNNNGTGG 4 cut(s) 984, 1019, 1256, 1291
CviQI GTAC 5 cut(s) 131, 238, 415, 755, 1150
DdeI CTNAG 1 cut(s) 208
DpnI GATC 5 cut(s) 258, 537, 646, 805, 1185
DpnII GATC 5 cut(s) 256, 535, 644, 803, 1183
DraI TTTAAA 1 cut(s) 696
DrdI GACNNNNNNGTC 1 cut(s) 94
DseDI GACNNNNNNGTC 1 cut(s) 94
Eam1104I CTCTTC 1 cut(s) 708
EarI CTCTTC 1 cut(s) 708
EciI GGCGGA 1 cut(s) 861
Ecl136II GAGCTC 1 cut(s) 403
Eco130I CCWWGG 4 cut(s) 193, 464, 1081, 1211
Eco147I AGGCCT 1 cut(s) 155
Eco24I GRGCYC 1 cut(s) 405
Eco47I GGWCC 2 cut(s) 182, 1138
Eco53kI GAGCTC 1 cut(s) 403
Eco57I CTGAAG 2 cut(s) 147, 558
Eco88I CYCGRG 1 cut(s) 165
EcoICRI GAGCTC 1 cut(s) 403
EcoO109I RGGNCCY 1 cut(s) 1138
EcoRII CCWGG 1 cut(s) 777
EcoT14I CCWWGG 4 cut(s) 193, 464, 1081, 1211
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 4 cut(s) 193, 464, 1081, 1211
FalI AAGNNNNNCTT 2 cut(s) 191, 223
FauI CCCGC 1 cut(s) 568
FblI GTMKAC 1 cut(s) 1064
Fnu4HI GCNGC 2 cut(s) 387, 1236
FokI GGATG 2 cut(s) 395, 953
FriOI GRGCYC 1 cut(s) 405
Fsp4HI GCNGC 2 cut(s) 387, 1236
FspAI RTGCGCAY 1 cut(s) 333
FspBI CTAG 2 cut(s) 654, 749
FspI TGCGCA 2 cut(s) 320, 333
GlaI GCGC 2 cut(s) 320, 333
GluI GCNGC 2 cut(s) 387, 1236
GsaI CCCAGC 1 cut(s) 762
HaeIII GGCC 1 cut(s) 155
HhaI GCGC 2 cut(s) 321, 334
Hin1I GRCGYC 1 cut(s) 30
Hin6I GCGC 2 cut(s) 319, 332
HinP1I GCGC 2 cut(s) 319, 332
HinfI GANTC 6 cut(s) 88, 101, 187, 369, 814, 1113
HphI GGTGA 2 cut(s) 182, 1058
Hpy166II GTNNAC 2 cut(s) 988, 1065
Hpy188I TCNGA 6 cut(s) 100, 186, 261, 902, 939, 1188
Hpy188III TCNNGA 5 cut(s) 125, 530, 642, 1018, 1104
Hpy8I GTNNAC 2 cut(s) 988, 1065
Hpy99I CGWCG 2 cut(s) 35, 568
HpyAV CCTTC 4 cut(s) 197, 582, 607, 1171
HpyCH4III ACNGT 2 cut(s) 138, 1273
HpyCH4IV ACGT 1 cut(s) 30
HpyCH4V TGCA 4 cut(s) 244, 351, 775, 933
HpyF10VI GCNNNNNNNGC 3 cut(s) 204, 430, 447
HpyF3I CTNAG 1 cut(s) 208
HpySE526I ACGT 1 cut(s) 30
Hsp92I GRCGYC 1 cut(s) 30
HspAI GCGC 2 cut(s) 319, 332
KpnI GGTACC 1 cut(s) 241
Kzo9I GATC 5 cut(s) 256, 535, 644, 803, 1183
LmnI GCTCC 2 cut(s) 25, 1129
Lsp1109I GCAGC 1 cut(s) 1222
LweI GCATC 3 cut(s) 373, 459, 558
MaeI CTAG 2 cut(s) 654, 749
MaeII ACGT 1 cut(s) 30
MaeIII GTNAC 2 cut(s) 55, 1046
MalI GATC 5 cut(s) 258, 537, 646, 805, 1185
MboI GATC 5 cut(s) 256, 535, 644, 803, 1183
MboII GAAGA 6 cut(s) 224, 233, 290, 639, 642, 725
MflI RGATCY 3 cut(s) 535, 644, 1183
MhlI GDGCHC 2 cut(s) 405, 561
MluCI AATT 8 cut(s) 359, 851, 858, 864, 979, 1007, 1026, 1218
MlyI GAGTC 1 cut(s) 82
MseI TTAA 5 cut(s) 456, 695, 795, 954, 1074
MslI CAYNNNNRTG 2 cut(s) 377, 971
MspR9I CCNGG 1 cut(s) 779
MvaI CCWGG 1 cut(s) 779
MvnI CGCG 2 cut(s) 389, 563
MwoI GCNNNNNNNGC 3 cut(s) 204, 430, 447
NcoI CCATGG 2 cut(s) 193, 464
NdeII GATC 5 cut(s) 256, 535, 644, 803, 1183
NlaIV GGNNCC 2 cut(s) 239, 558
NmuCI GTSAC 1 cut(s) 1046
NsbI TGCGCA 2 cut(s) 320, 333
NspI RCATGY 3 cut(s) 428, 496, 948
PaeR7I CTCGAG 1 cut(s) 165
PceI AGGCCT 1 cut(s) 155
PfeI GAWTC 5 cut(s) 101, 187, 369, 814, 1113
PkrI GCNGC 2 cut(s) 388, 1237
PleI GAGTC 1 cut(s) 82
PpsI GAGTC 1 cut(s) 82
PpuMI RGGWCCY 1 cut(s) 1138
PshAI GACNNNNGTC 1 cut(s) 266
PsiI TTATAA 1 cut(s) 869
Psp124BI GAGCTC 1 cut(s) 405
Psp5II RGGWCCY 1 cut(s) 1138
Psp6I CCWGG 1 cut(s) 777
PspFI CCCAGC 1 cut(s) 758
PspGI CCWGG 1 cut(s) 777
PspN4I GGNNCC 2 cut(s) 239, 558
PspPI GGNCC 2 cut(s) 182, 1138
PspPPI RGGWCCY 1 cut(s) 1138
PspXI VCTCGAGB 1 cut(s) 165
PstI CTGCAG 1 cut(s) 246
PsuI RGATCY 3 cut(s) 535, 644, 1183
RsaI GTAC 5 cut(s) 132, 239, 416, 756, 1151
RsaNI GTAC 5 cut(s) 131, 238, 415, 755, 1150
RseI CAYNNNNRTG 2 cut(s) 377, 971
SacI GAGCTC 1 cut(s) 405
SaqAI TTAA 5 cut(s) 456, 695, 795, 954, 1074
SatI GCNGC 2 cut(s) 387, 1236
Sau3AI GATC 5 cut(s) 256, 535, 644, 803, 1183
Sau96I GGNCC 2 cut(s) 182, 1138
ScaI AGTACT 2 cut(s) 132, 1151
SchI GAGTC 1 cut(s) 82
ScrFI CCNGG 1 cut(s) 779
SduI GDGCHC 2 cut(s) 405, 561
SfaNI GCATC 3 cut(s) 373, 459, 558
SfcI CTRYAG 2 cut(s) 177, 242
Sfr274I CTCGAG 1 cut(s) 165
SinI GGWCC 2 cut(s) 182, 1138
SlaI CTCGAG 1 cut(s) 165
SmiMI CAYNNNNRTG 2 cut(s) 377, 971
SmlI CTYRAG 2 cut(s) 165, 530
SmoI CTYRAG 2 cut(s) 165, 530
Sse9I AATT 8 cut(s) 359, 851, 858, 864, 979, 1007, 1026, 1218
SseBI AGGCCT 1 cut(s) 155
SsiI CCGC 7 cut(s) 311, 387, 448, 551, 561, 846, 1097
SspI AATATT 2 cut(s) 638, 1199
SspMI CTAG 2 cut(s) 654, 749
SstI GAGCTC 1 cut(s) 405
StuI AGGCCT 1 cut(s) 155
StyD4I CCNGG 1 cut(s) 777
StyI CCWWGG 4 cut(s) 193, 464, 1081, 1211
TaaI ACNGT 2 cut(s) 138, 1273
TaiI ACGT 1 cut(s) 33
TaqI TCGA 4 cut(s) 33, 166, 730, 741
TasI AATT 8 cut(s) 359, 851, 858, 864, 979, 1007, 1026, 1218
TatI WGTACW 2 cut(s) 130, 1149
TauI GCSGC 1 cut(s) 389
TfiI GAWTC 5 cut(s) 101, 187, 369, 814, 1113
Tru1I TTAA 5 cut(s) 456, 695, 795, 954, 1074
Tru9I TTAA 5 cut(s) 456, 695, 795, 954, 1074
TscAI CASTG 3 cut(s) 358, 553, 841
TseFI GTSAC 1 cut(s) 1046
TseI GCWGC 1 cut(s) 1235
Tsp45I GTSAC 1 cut(s) 1046
TspDTI ATGAA 3 cut(s) 162, 382, 514
TspGWI ACGGA 1 cut(s) 722
TspRI CASTG 3 cut(s) 358, 553, 841
VpaK11BI GGWCC 2 cut(s) 182, 1138
XapI RAATTY 2 cut(s) 359, 858
XceI RCATGY 3 cut(s) 428, 496, 948
XhoI CTCGAG 1 cut(s) 165
XmiI GTMKAC 1 cut(s) 1064
XspI CTAG 2 cut(s) 654, 749
ZraI GACGTC 1 cut(s) 31
ZrmI AGTACT 2 cut(s) 132, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.