RLG00000020055

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000234
Physical Location & Seq
Reverse (-)
60618434 .. 60622644
4211 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020055

Sequence Viewer

Length: 1635 bp
ATGACAGCTCTCGAAAATTCTGGAGTGGTAGTAACCTCCTTGGAACTGAGAAAGAGTTCAAGATTTTCATGGAGAAACATGGGAAGAAGTATCCAACTAGAAAGGAGTACTTGCAGTGCCGCTAAGCGCCAAGCTCTGGATCCGACAGTGGTCCACGGCGTCAAAGAGTTCTCGAATCTGTCCGAGGAGGAATTCAAGGGGATGTACAGCGGCGTGAGAGGTGAGCCCGGCTTAAAAGACAGCAACGGTGGTGTAGAAAGTACGGTTGAGCTCATGGATATTAGTGGGTTGCCTAAGAGTTTTGATTGGAGAGAGAATGAGTTGTTACTGAGGTCAAGATGCAGCATATACGACATGGATTTGATCTGGGTTAGGGACTCGAAGGCTATATTCCAACTGGAAGACGAAGTCCCCTCTCACACTCCTCTGACTTCTCTGTCGCCGCAAAATCTCGGAGCATCTCAATTCTCGATCAGGATGAGAAGAAATAAATGCAAGAAGAGTAGTAGTAGTAGTAGTACTATTAGTAGTGTTAGTTATATGCCTGAAGAAATCTTGATCAACATCCTAGCAAGATTACCTGCAAAGTCCCTCCTTCGGTTTAGGTGTGTATCCCAGTCATGGCGTGGTTTGATTGGCAGCCCAAGTTTTGTTAGTAAACATCTTAATAGGAATGTTACAAAACTGTCGCATACCTATCTAATTGCCCTCCAGCGCTTGAGAGATAAGCCAGCACTATGCCACTCACTATTTTCTACTGACACATTTGAGGAGTGTTTGAAGTTGAGACATCCCTTGTGGACTGAGGAACAATTTAGGATATATGGTTCAAGTAATGGGCTGGTTTGTATTTCGGATCAAGTACTGCGGCCGAGTAGTCCTATATGCATATGGAATCCATGTATTAGGAAATTTAGGACTCTTCCACAATCAATATTCAAACCACATTATTCCAGTTATGATATCTCTCTCTCATTTGGGTTCCACCCGGAGCTTAATGACTACAGAGTGGTAACAATGGCTTGGTATGTTCGATCTATCATAAAAGTGCAGGTCTATAGTCTTAGTACTGGCTCTTGGAAGATGATTGAAGCAATTCCTCCTTGGTTAAAGTTCAATCCGGACTGGTGTCAAGGATGCACATTTTTCAATGGAGTGGCGTTTTGGCTTTTTACAAAGTCAAAAAAGTTTAGATTTGTGTCATTTGATACGGATAGTGAAGAATTTGAAGAATTGATGGTACCAGATACTATTTCCACCAAGGGTTTGTCTTATGTTGGAGTCTACAATGGCTCAGTTTGCCTTTTTTATTCCTATCTTGAAGGTCCTGATTGCCAGAAACCACAAAAATATATGGACATATGGGTTCTGAAAGAACAGTCCTTTACCAAGTTGCACACTGCATTTTTACTGCCTGGAAGAGACTATTTGCCATTGGGGTTTAGTATCCAGAACGAACTCATTGCGAAAGACAAAAAGCATACTAAAGGTGATGAAGGAGATACGGGCCAGATGGTTTTATATGATCTCGAAATGAAGCTGATAAAGAAAACAGGGATTAGCATGGCGCATGATAGTCATTACAAAACTTCAGCAGGTACTTACATTGAAAGTTTGGTTCTACTCGATCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

545

Amino Acids

62.13

Weight (kDa)

8.78

Isoelectric Point (pI)

48.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 180 - 216 5e-08 F-box-like
F-box PF00646 181 - 218 5.5e-11 F-box domain
FBA_3 PF08268 268 - 461 4.7e-20 F-box associated beta propeller domain
FBA_1 PF07734 277 - 540 8.8e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000234)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18880 FvH4_2g02020 FvH4_2g02020 FvH4_2g37110 FvH4_6g33750 FvH4_6g33770 FvH4_6g34412 FvH4_7g08973
malus_domestica MD09G1191300.v1.1 MD09G1281000.v1.1 MD09G1281100.v1.1 MD09G1281200.v1.1 MD12G1050800.v1.1
prunus_persica Prupe.1G188300_v2.0.a1 Prupe.2G120700_v2.0.a1 Prupe.3G013300_v2.0.a1 Prupe.3G013500_v2.0.a1 Prupe.3G047100_v2.0.a1 Prupe.3G047200_v2.0.a1 Prupe.3G047300_v2.0.a1 Prupe.3G047400_v2.0.a1 Prupe.6G319100_v2.0.a1
pyrus_communis pycom09g18870 pycom11g17570 pycom12g04520 pycom14g04100
rosa_chinensis RchiOBHm_Chr1g0321721 RchiOBHm_Chr1g0321751 RchiOBHm_Chr1g0344471 RchiOBHm_Chr1g0344741 RchiOBHm_Chr1g0344891 RchiOBHm_Chr2g0143631 RchiOBHm_Chr2g0143641 RchiOBHm_Chr2g0144781 RchiOBHm_Chr3g0458821 RchiOBHm_Chr6g0245251 RchiOBHm_Chr6g0304681
rosa_laevigata RLG00000007681 RLG00000010222 RLG00000013320 RLG00000015313 RLG00000017431 RLG00000017439 RLG00000020055 RLG00000020056 RLG00000020112 RLG00000025133 RLG00000028872 RLG00000028881 RLG00000028884 RLG00000030407
rosa_multiflora Rmu_co8324891.1_g000001 Rmu_sc0000087.1_g000002 Rmu_sc0001288.1_g000009 Rmu_sc0001634.1_g000031 Rmu_sc0001942.1_g000032 Rmu_sc0003410.1_g000036 Rmu_sc0003909.1_g000002 Rmu_sc0004340.1_g000024 Rmu_sc0005308.1_g000008 Rmu_sc0005705.1_g000040 Rmu_sc0016560.1_g000002 Rmu_ssc0000167.1_g000005
rosa_roxburghii Rroxscaffold_2G00101580 Rroxscaffold_4G00309600 Rroxscaffold_4G00309710 Rroxscaffold_4G00327490 Rroxscaffold_5G00333360 Rroxscaffold_6G00420770 Rroxscaffold_7G00163600 Rroxscaffold_7G00215330
rosa_rugosa Rorug01G0174400 Rorug02G0213500 Rorug02G0384500 Rorug02G0384500 Rorug02G0384500 Rorug03G0032100 Rorug03G0301100 Rorug05G0513100
rosa_samantha Rh1AG045800 Rh1AG046600 Rh1AG191000 Rh1AG191200 Rh1AG192400 Rh1BG045100 Rh1BG157400 Rh1BG158200 Rh1CG048800 Rh1CG176300 Rh1CG177700 Rh1DG053100 Rh1DG055000 Rh1DG188800 Rh2AG180100 Rh2AG180200 Rh2AG436400 Rh2AG436500 Rh2AG441300 Rh2BG444000 Rh2BG444100 Rh2BG452000 Rh2CG422700 Rh2CG422800 Rh2CG428600 Rh2DG185900 Rh2DG186000 Rh2DG454300 Rh2DG454400 Rh2DG461700 Rh3AG089700 Rh3BG092600 Rh3CG092900 Rh3DG093600 Rh4AG005900 Rh4DG004900 Rh4DG010300 Rh4DG010400 Rh4DG230700 Rh6AG028300 Rh6AG445500 Rh6BG024500 Rh6BG456400 Rh6BG456500 Rh6CG022600 Rh6CG458300 Rh6CG458400 Rh6DG022600 Rh6DG445500
rosa_wichuraiana Rw1G004020 Rw1G004060 Rw1G004180 Rw1G015690 Rw1G015790 Rw2G014090 Rw2G035570 Rw2G035580 Rw2G036090 Rw3G007680 Rw6G002380 Rw6G038740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 436
Acc36I ACCTGC 3 cut(s) 589, 1042, 1586
Acc65I GGTACC 1 cut(s) 1240
AccB1I GGYRCC 1 cut(s) 1240
AccB7I CCANNNNNTGG 1 cut(s) 136
AccI GTMKAC 1 cut(s) 1284
AccIII TCCGGA 1 cut(s) 1120
AciI CCGC 4 cut(s) 120, 210, 443, 868
AclWI GGATC 3 cut(s) 134, 147, 864
AcoI YGGCCR 1 cut(s) 869
AcsI RAATTY 4 cut(s) 16, 191, 911, 1223
AcuI CTGAAG 2 cut(s) 567, 1575
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 8 cut(s) 109, 206, 262, 520, 864, 1069, 1242, 1600
AfeI AGCGCT 1 cut(s) 716
AfiI CCNNNNNNNGG 3 cut(s) 136, 597, 621
AjnI CCWGG 1 cut(s) 1414
AloI GAACNNNNNNTCC 2 cut(s) 811, 843
AluBI AGCT 5 cut(s) 8, 134, 271, 994, 1540
AluI AGCT 5 cut(s) 8, 134, 271, 994, 1540
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 2 cut(s) 781, 1416
AlwI GGATC 3 cut(s) 134, 147, 864
Aor13HI TCCGGA 1 cut(s) 1120
Aor51HI AGCGCT 1 cut(s) 716
AoxI GGCC 2 cut(s) 869, 1507
ApeKI GCWGC 2 cut(s) 342, 639
ApoI RAATTY 4 cut(s) 16, 191, 911, 1223
Asp700I GAANNNNTTC 2 cut(s) 55, 1095
Asp718I GGTACC 1 cut(s) 1240
AspLEI GCGC 3 cut(s) 129, 717, 1570
AspS9I GGNCC 3 cut(s) 151, 1325, 1507
AsuC2I CCSGG 2 cut(s) 228, 989
AsuHPI GGTGA 2 cut(s) 233, 1502
AvaII GGWCC 2 cut(s) 151, 1325
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 1 cut(s) 1240
BanII GRGCYC 2 cut(s) 228, 273
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 1 cut(s) 273
BbvI GCAGC 2 cut(s) 354, 651
BccI CCATC 2 cut(s) 1231, 1507
BceAI ACGGC 1 cut(s) 172
BcgI CGANNNNNNTGC 2 cut(s) 1445, 1479
BciT130I CCWGG 1 cut(s) 1416
BciVI GTATCC 3 cut(s) 101, 622, 1457
BclI TGATCA 1 cut(s) 558
BcnI CCSGG 2 cut(s) 228, 989
BcoDI GTCTC 2 cut(s) 781, 1416
BfaI CTAG 2 cut(s) 98, 569
BfmI CTRYAG 2 cut(s) 1003, 1057
BfoI RGCGCY 2 cut(s) 130, 718
BfuAI ACCTGC 3 cut(s) 589, 1042, 1586
BfuI GTATCC 3 cut(s) 101, 622, 1457
BisI GCNGC 6 cut(s) 120, 211, 343, 443, 640, 869
BlpI GCTNAGC 1 cut(s) 123
BlsI GCNGC 6 cut(s) 121, 212, 344, 444, 641, 870
BmcAI AGTACT 4 cut(s) 109, 520, 864, 1069
Bme1390I CCNGG 3 cut(s) 228, 989, 1416
Bme18I GGWCC 2 cut(s) 151, 1325
BmgT120I GGNCC 3 cut(s) 151, 1325, 1507
BmiI GGNNCC 3 cut(s) 141, 983, 1242
BmrFI CCNGG 3 cut(s) 228, 989, 1416
BmrI ACTGGG 1 cut(s) 610
BmsI GCATC 3 cut(s) 329, 467, 1127
BmuI ACTGGG 1 cut(s) 610
BoxI GACNNNNGTC 2 cut(s) 149, 1128
BpiI GAAGAC 1 cut(s) 408
BpmI CTGGAG 2 cut(s) 42, 695
Bpu1102I GCTNAGC 1 cut(s) 123
BpuEI CTTGAG 1 cut(s) 739
BpuMI CCSGG 2 cut(s) 228, 989
BsaBI GATNNNNATC 1 cut(s) 563
BsaHI GRCGYC 1 cut(s) 159
BsaJI CCNNGG 5 cut(s) 39, 154, 183, 1103, 1260
BsaWI WCCGGW 1 cut(s) 1120
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 597, 621
Bse1I ACTGG 5 cut(s) 402, 616, 954, 1075, 1130
Bse3DI GCAATG 1 cut(s) 1461
Bse8I GATNNNNATC 1 cut(s) 563
BseAI TCCGGA 1 cut(s) 1120
BseBI CCWGG 1 cut(s) 1416
BseDI CCNNGG 5 cut(s) 39, 154, 183, 1103, 1260
BseGI GGATG 5 cut(s) 207, 483, 564, 790, 1142
BseJI GATNNNNATC 1 cut(s) 563
BseLI CCNNNNNNNGG 3 cut(s) 136, 597, 621
BseMI GCAATG 1 cut(s) 1461
BseMII CTCAG 4 cut(s) 38, 320, 795, 1308
BseNI ACTGG 5 cut(s) 402, 616, 954, 1075, 1130
BseRI GAGGAG 3 cut(s) 200, 414, 785
BseX3I CGGCCG 1 cut(s) 869
BseXI GCAGC 2 cut(s) 354, 651
BsgI GTGCAG 1 cut(s) 1070
Bsh1285I CGRYCG 2 cut(s) 872, 1630
BshFI GGCC 2 cut(s) 871, 1509
BshNI GGYRCC 1 cut(s) 1240
BsiEI CGRYCG 2 cut(s) 872, 1630
BsiHKAI GWGCWC 1 cut(s) 273
BsiSI CCGG 3 cut(s) 228, 989, 1121
BslFI GGGAC 3 cut(s) 389, 395, 574
BslI CCNNNNNNNGG 3 cut(s) 136, 597, 621
BsmAI GTCTC 2 cut(s) 781, 1416
BsmFI GGGAC 3 cut(s) 389, 395, 574
BsnI GGCC 2 cut(s) 871, 1509
Bsp1286I GDGCHC 2 cut(s) 228, 273
Bsp13I TCCGGA 1 cut(s) 1120
Bsp1407I TGTACA 1 cut(s) 204
Bsp143I GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
Bsp1720I GCTNAGC 1 cut(s) 123
BspACI CCGC 4 cut(s) 120, 210, 443, 868
BspANI GGCC 2 cut(s) 871, 1509
BspCNI CTCAG 4 cut(s) 39, 321, 796, 1307
BspEI TCCGGA 1 cut(s) 1120
BspLI GGNNCC 3 cut(s) 141, 983, 1242
BspMI ACCTGC 3 cut(s) 589, 1042, 1586
BspPI GGATC 3 cut(s) 134, 147, 864
BspT107I GGYRCC 1 cut(s) 1240
BsrDI GCAATG 1 cut(s) 1461
BsrGI TGTACA 1 cut(s) 204
BsrI ACTGG 5 cut(s) 402, 616, 954, 1075, 1130
BssECI CCNNGG 5 cut(s) 39, 154, 183, 1103, 1260
BssMI GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
BssNI GRCGYC 1 cut(s) 159
BssT1I CCWWGG 3 cut(s) 39, 1103, 1260
Bst2UI CCWGG 1 cut(s) 1416
Bst4CI ACNGT 5 cut(s) 148, 248, 265, 687, 1380
Bst6I CTCTTC 3 cut(s) 494, 927, 1414
BstACI GRCGYC 1 cut(s) 159
BstAUI TGTACA 1 cut(s) 204
BstC8I GCNNGC 1 cut(s) 732
BstDEI CTNAG 7 cut(s) 47, 123, 294, 329, 804, 1064, 1294
BstDSI CCRYGG 1 cut(s) 154
BstF5I GGATG 5 cut(s) 207, 483, 564, 790, 1142
BstH2I RGCGCY 2 cut(s) 130, 718
BstHHI GCGC 3 cut(s) 129, 717, 1570
BstKTI GATC 8 cut(s) 142, 366, 474, 561, 859, 1037, 1528, 1630
BstMAI GTCTC 2 cut(s) 781, 1416
BstMBI GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
BstMCI CGRYCG 2 cut(s) 872, 1630
BstMWI GCNNNNNNNGC 1 cut(s) 1299
BstNI CCWGG 1 cut(s) 1416
BstPAI GACNNNNGTC 2 cut(s) 149, 1128
BstSCI CCNGG 3 cut(s) 226, 987, 1414
BstSFI CTRYAG 2 cut(s) 1003, 1057
BstV1I GCAGC 2 cut(s) 354, 651
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BstZI CGGCCG 1 cut(s) 869
BsuI GTATCC 3 cut(s) 101, 622, 1457
BsuRI GGCC 2 cut(s) 871, 1509
BtgI CCRYGG 1 cut(s) 154
BtsCI GGATG 5 cut(s) 207, 483, 564, 790, 1142
BtsI GCAGTG 2 cut(s) 121, 1398
BtsIMutI CAGTG 3 cut(s) 121, 153, 1398
BveI ACCTGC 3 cut(s) 589, 1042, 1586
Cac8I GCNNGC 1 cut(s) 732
CfoI GCGC 3 cut(s) 129, 717, 1570
Cfr13I GGNCC 3 cut(s) 151, 1325, 1507
CseI GACGC 1 cut(s) 148
Csp6I GTAC 8 cut(s) 108, 205, 261, 519, 863, 1068, 1241, 1599
CviAII CATG 8 cut(s) 69, 79, 274, 355, 621, 900, 1564, 1571
CviQI GTAC 8 cut(s) 108, 205, 261, 519, 863, 1068, 1241, 1599
DdeI CTNAG 7 cut(s) 47, 123, 294, 329, 804, 1064, 1294
DpnI GATC 8 cut(s) 141, 365, 473, 560, 858, 1036, 1527, 1629
DpnII GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
DrdI GACNNNNNNGTC 1 cut(s) 436
DseDI GACNNNNNNGTC 1 cut(s) 436
EaeI YGGCCR 1 cut(s) 869
EagI CGGCCG 1 cut(s) 869
Eam1104I CTCTTC 3 cut(s) 494, 927, 1414
EarI CTCTTC 3 cut(s) 494, 927, 1414
Ecl136II GAGCTC 1 cut(s) 271
EclXI CGGCCG 1 cut(s) 869
Eco130I CCWWGG 3 cut(s) 39, 1103, 1260
Eco24I GRGCYC 2 cut(s) 228, 273
Eco32I GATATC 1 cut(s) 964
Eco47I GGWCC 2 cut(s) 151, 1325
Eco47III AGCGCT 1 cut(s) 716
Eco52I CGGCCG 1 cut(s) 869
Eco53kI GAGCTC 1 cut(s) 271
Eco57I CTGAAG 2 cut(s) 567, 1575
EcoICRI GAGCTC 1 cut(s) 271
EcoO109I RGGNCCY 1 cut(s) 1325
EcoRI GAATTC 1 cut(s) 191
EcoRII CCWGG 1 cut(s) 1414
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 3 cut(s) 39, 1103, 1260
EcoT22I ATGCAT 1 cut(s) 890
EcoT38I GRGCYC 2 cut(s) 228, 273
ErhI CCWWGG 3 cut(s) 39, 1103, 1260
FaeI CATG 8 cut(s) 72, 82, 277, 358, 624, 903, 1567, 1574
FalI AAGNNNNNCTT 2 cut(s) 94, 126
FaqI GGGAC 3 cut(s) 389, 395, 574
FatI CATG 8 cut(s) 68, 78, 273, 354, 620, 899, 1563, 1570
FauNDI CATATG 2 cut(s) 890, 1361
FbaI TGATCA 1 cut(s) 558
FblI GTMKAC 1 cut(s) 1284
Fnu4HI GCNGC 6 cut(s) 120, 211, 343, 443, 640, 869
FokI GGATG 5 cut(s) 214, 490, 551, 777, 1149
FriOI GRGCYC 2 cut(s) 228, 273
Fsp4HI GCNGC 6 cut(s) 120, 211, 343, 443, 640, 869
FspBI CTAG 2 cut(s) 98, 569
GlaI GCGC 3 cut(s) 128, 716, 1569
GluI GCNGC 6 cut(s) 120, 211, 343, 443, 640, 869
GsuI CTGGAG 2 cut(s) 42, 695
HaeII RGCGCY 2 cut(s) 130, 718
HaeIII GGCC 2 cut(s) 871, 1509
HapII CCGG 3 cut(s) 228, 989, 1121
HgaI GACGC 1 cut(s) 148
HhaI GCGC 3 cut(s) 129, 717, 1570
Hin1I GRCGYC 1 cut(s) 159
Hin1II CATG 8 cut(s) 72, 82, 277, 358, 624, 903, 1567, 1574
Hin6I GCGC 3 cut(s) 127, 715, 1568
HinP1I GCGC 3 cut(s) 127, 715, 1568
HinfI GANTC 5 cut(s) 175, 377, 895, 919, 1281
HpaII CCGG 3 cut(s) 228, 989, 1121
HphI GGTGA 2 cut(s) 233, 1502
Hpy166II GTNNAC 4 cut(s) 154, 659, 801, 1285
Hpy188I TCNGA 6 cut(s) 144, 184, 429, 455, 856, 1371
Hpy8I GTNNAC 4 cut(s) 154, 659, 801, 1285
HpyAV CCTTC 4 cut(s) 376, 605, 1316, 1490
HpyCH4III ACNGT 5 cut(s) 148, 248, 265, 687, 1380
HpyCH4V TGCA 9 cut(s) 114, 342, 495, 584, 888, 1051, 1140, 1396, 1403
HpyF10VI GCNNNNNNNGC 1 cut(s) 1299
HpyF3I CTNAG 7 cut(s) 47, 123, 294, 329, 804, 1064, 1294
Hsp92I GRCGYC 1 cut(s) 159
Hsp92II CATG 8 cut(s) 72, 82, 277, 358, 624, 903, 1567, 1574
HspAI GCGC 3 cut(s) 127, 715, 1568
Kpn2I TCCGGA 1 cut(s) 1120
KpnI GGTACC 1 cut(s) 1244
Ksp22I TGATCA 1 cut(s) 558
Kzo9I GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
LmnI GCTCC 2 cut(s) 455, 991
Lsp1109I GCAGC 2 cut(s) 354, 651
LweI GCATC 3 cut(s) 329, 467, 1127
MaeI CTAG 2 cut(s) 98, 569
MaeIII GTNAC 4 cut(s) 31, 324, 676, 1012
MalI GATC 8 cut(s) 141, 365, 473, 560, 858, 1036, 1527, 1629
MboI GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 2 cut(s) 228, 273
MluCI AATT 9 cut(s) 16, 191, 464, 702, 812, 911, 1095, 1223, 1232
MlyI GAGTC 3 cut(s) 371, 913, 1290
MmeI TCCRAC 4 cut(s) 118, 167, 418, 1258
Mph1103I ATGCAT 1 cut(s) 890
MroI TCCGGA 1 cut(s) 1120
MroXI GAANNNNTTC 2 cut(s) 55, 1095
MseI TTAA 4 cut(s) 233, 666, 996, 1109
MslI CAYNNNNRTG 1 cut(s) 1046
MspA1I CMGCKG 1 cut(s) 210
MspI CCGG 3 cut(s) 228, 989, 1121
MspR9I CCNGG 3 cut(s) 228, 989, 1416
MvaI CCWGG 1 cut(s) 1416
MwoI GCNNNNNNNGC 1 cut(s) 1299
NciI CCSGG 2 cut(s) 228, 989
NdeI CATATG 2 cut(s) 890, 1361
NdeII GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
NlaIII CATG 8 cut(s) 72, 82, 277, 358, 624, 903, 1567, 1574
NlaIV GGNNCC 3 cut(s) 141, 983, 1242
NmeAIII GCCGAG 1 cut(s) 897
NsiI ATGCAT 1 cut(s) 890
PdmI GAANNNNTTC 2 cut(s) 55, 1095
PfeI GAWTC 2 cut(s) 175, 895
PflFI GACNNNGTC 1 cut(s) 407
PflMI CCANNNNNTGG 1 cut(s) 136
PkrI GCNGC 6 cut(s) 121, 212, 344, 444, 641, 870
Ple19I CGATCG 1 cut(s) 1630
PleI GAGTC 3 cut(s) 371, 913, 1289
PpsI GAGTC 3 cut(s) 371, 913, 1289
PpuMI RGGWCCY 1 cut(s) 1325
PshAI GACNNNNGTC 2 cut(s) 149, 1128
Psp124BI GAGCTC 1 cut(s) 273
Psp5II RGGWCCY 1 cut(s) 1325
Psp6I CCWGG 1 cut(s) 1414
PspGI CCWGG 1 cut(s) 1414
PspN4I GGNNCC 3 cut(s) 141, 983, 1242
PspPI GGNCC 3 cut(s) 151, 1325, 1507
PspPPI RGGWCCY 1 cut(s) 1325
PsuI RGATCY 1 cut(s) 139
PsyI GACNNNGTC 1 cut(s) 407
PvuI CGATCG 1 cut(s) 1630
RsaI GTAC 8 cut(s) 109, 206, 262, 520, 864, 1069, 1242, 1600
RsaNI GTAC 8 cut(s) 108, 205, 261, 519, 863, 1068, 1241, 1599
RseI CAYNNNNRTG 1 cut(s) 1046
SacI GAGCTC 1 cut(s) 273
SaqAI TTAA 4 cut(s) 233, 666, 996, 1109
SatI GCNGC 6 cut(s) 120, 211, 343, 443, 640, 869
Sau3AI GATC 8 cut(s) 139, 363, 471, 558, 856, 1034, 1525, 1627
Sau96I GGNCC 3 cut(s) 151, 1325, 1507
ScaI AGTACT 4 cut(s) 109, 520, 864, 1069
SchI GAGTC 3 cut(s) 371, 913, 1290
ScrFI CCNGG 3 cut(s) 228, 989, 1416
SduI GDGCHC 2 cut(s) 228, 273
SfaNI GCATC 3 cut(s) 329, 467, 1127
SfcI CTRYAG 2 cut(s) 1003, 1057
SinI GGWCC 2 cut(s) 151, 1325
SmiMI CAYNNNNRTG 1 cut(s) 1046
SmlI CTYRAG 1 cut(s) 718
SmoI CTYRAG 1 cut(s) 718
Sse9I AATT 9 cut(s) 16, 191, 464, 702, 812, 911, 1095, 1223, 1232
SsiI CCGC 4 cut(s) 120, 210, 443, 868
SspI AATATT 1 cut(s) 936
SspMI CTAG 2 cut(s) 98, 569
SstI GAGCTC 1 cut(s) 273
StyD4I CCNGG 3 cut(s) 226, 987, 1414
StyI CCWWGG 3 cut(s) 39, 1103, 1260
TaaI ACNGT 5 cut(s) 148, 248, 265, 687, 1380
TaqI TCGA 7 cut(s) 12, 173, 380, 470, 1033, 1530, 1626
TasI AATT 9 cut(s) 16, 191, 464, 702, 812, 911, 1095, 1223, 1232
TatI WGTACW 5 cut(s) 107, 204, 518, 862, 1067
TauI GCSGC 4 cut(s) 122, 213, 445, 871
TfiI GAWTC 2 cut(s) 175, 895
Tru1I TTAA 4 cut(s) 233, 666, 996, 1109
Tru9I TTAA 4 cut(s) 233, 666, 996, 1109
TscAI CASTG 3 cut(s) 121, 153, 1405
TseI GCWGC 2 cut(s) 342, 639
TspDTI ATGAA 3 cut(s) 57, 1509, 1550
TspGWI ACGGA 1 cut(s) 1226
TspRI CASTG 3 cut(s) 121, 153, 1405
Tth111I GACNNNGTC 1 cut(s) 407
Van91I CCANNNNNTGG 1 cut(s) 136
VpaK11BI GGWCC 2 cut(s) 151, 1325
XapI RAATTY 4 cut(s) 16, 191, 911, 1223
XcmI CCANNNNNNNNNTGG 1 cut(s) 623
XmiI GTMKAC 1 cut(s) 1284
XmnI GAANNNNTTC 2 cut(s) 55, 1095
XspI CTAG 2 cut(s) 98, 569
ZrmI AGTACT 4 cut(s) 109, 520, 864, 1069
Zsp2I ATGCAT 1 cut(s) 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.