AT4G10200

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000215
Physical Location & Seq
Forward (+)
6352957 .. 6355609
2653 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G10200.2

Sequence Viewer

Length: 2202 bp
ATGACGAAGTCTTTGGCTGATTCTATGTTGAGGTATGTGAAAAGATCAACACCTCTCAAACCAAATGAGAATCCTACGAGTGTTGAGAATGACAAAGCAGAAGAAATTTGTGAAGATACTGATGTGAATATGAATACCATACCAGAATGTGTTTACAGTGGAGAAAAAGATGAGCTTTTGGAAATTACGGATCCAGCAAACTGGAAAAATATTGATAGGGAATTAAGAGATTTTCTAGTCGAAAAAGGTCCTATGAAAAGGGTACATGAGAAGTATGCTTTCCCGAAAACTGCTGGTATTAGAAGACATTTTTCTCACAGGTATTACAAAAGAGAGATGAAAAATGGAGATAAGCAAGACAGAAATTGGTTATTATACTCAAAAGTATCGGATAAGGTTTATTGCTTTTGCTGCAAGTTATTTGGTCGAGACCAAGACGCGATGCAGTTGTCAAGCACCGGGTTTAATGATTGGAGGAATATCAGGATAAGACTTAGCCAACATGAGACTAGTCATCGTCATATTGTTTGCATGAGTAAGTGGATGGAACTAGAGTTGAGACTACGAAAGCATCTGACCATTGATAAGTGTCTTCAAAAAGACATTAACATAGAGAAAAACCATTGGAGAGAAGTTCTGTTGAGAATATTTTCATTGGTAAAAAACCTTGCAAAACAGAATTTGGCTTTCCGTGGAGAAAATGAGAAGATTGGTCAGAAAAACAATGGTAACTTTCGAGTTTTATTGAATCGTTCGGCGACTTTGATCCAGTCATACGAGAGCATATCAGACGAGTTAAAGAAGGTCCAACTTATGATTATTAAGAAAATTCAAGAGGCGAAATACTTTTCTGTTATTCTCGACTGCACTCCGGATAAGAGTCATAAAGAACAGATGAGTCTCATTATCAGATGTGTGGATGTCTCCATGGCTTCGACACAAGTTTCAGAATTTTTTCTAACGTTTGTTGAAGTTTCAGATAAATCCGGGGAAGGACTCTTTGAGCTACTTTGTGATACTTTGGTTGCTCTCAATTTGAATATTAATGATGTGAGAGGGCAAGGCTATGATAATGGATGCAATATGAAAGGGAAACACAAAGGAGTACAAAAAAAGTTGCTTGATATCAATTCAAGAGCGTTTTATACGCCGTGTGGTTGCCATAGTCTTAACTTGCCAAGTCATCTAAAAAAGCGATTGAATTCTTTGGAATCATTCAGCGGATTTACTGCTTGTTTTCATCATCTACAACAAGGCCTAAAAATAAGAGATGCATTGGACTACTTGGCTGAAAATTGTGATGACCCGAAAGCTCGCAGCGATGCAGACTGCCTTGCTACAAGTGAGACACACAGAATTGGTGGATTTGAGTTCTTGTTTGGTATGGTTATTTGGTACAATCTTCTTTTTACCATGAACACAGTAAGTAAGGCGCTACAGTCAGAGAATATTGATATTGAACTTGCTCTTGTTCAACTGAAAGGGTTAGTCTCTTATCTACAAAATTACAGAGAAACTGGTTTTCAAGAAGCTAAAGCAGAAGCTACATTAATTGCTGAATCTATGGATATCGAACCAAAATTTCCTGTGAAAAGAAAGCGCATCATTAAAAGGAAAAGGCATTTTGATGAAGAGATGGAGAATGATGTTGAAACTGAATTGCTTAGCGAGGAAGAGAATTTTAAAGTGAGGTTTGAGCAATTTGAAGAGTATGGAAGAATTTTTAGATTTTTGTTTGATCTAAGGAAGCTCAAATCTGCAAGTGATGATGGCTTAAAGGCAGCATGTATAAACCTTGAAACTTCTCTTAAACATGGAGATAGTTCAGACGTTGATGGGAATCATTTATTCTTAGAGCTGAAAGTTTTAAAAGAACTTTTACCGACCGAGATCACGAAAGCTATTGAAGTGTTAAACTTTTTGAAAAAGTTTGAAGGTTGTTATCCAAATACATGGATTGCGTTTAGAGTGATGCTAACAGTTCCAGTTTCAGTCGCCTCAGCCGAAAGAAGTTTTTCCAAGCTAAAGTTGATAAAGTCATACTCACGATCAACAATGTCAGAAGAGAGATTGAATGCCTTGGCGATATTGTCAATTGAAAGAGATTTAGTTGGAGAGCTCGACTATATAAGTTTGATGAACGACTTTGCGGCAAAAACTGCAAGAAGATCTATTTTCGAAATCCGAGATGATGATGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

733

Amino Acids

84.88

Weight (kDa)

7.24

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 267 - 368 6.3e-09 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 621 - 703 3.3e-19 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35150 AT2G06500 AT2G16040 AT2G19960 AT2G19960 AT3G29638 AT3G29794 AT4G10200 AT4G10200 AT5G35475
fragaria_vesca FvH4_1g08455 FvH4_1g08761 FvH4_1g10851 FvH4_1g17271 FvH4_1g26762 FvH4_2g15031 FvH4_2g18762 FvH4_2g29241 FvH4_2g32571 FvH4_4g01531 FvH4_4g12942 FvH4_4g14421 FvH4_4g14431 FvH4_4g14434 FvH4_5g30891 FvH4_6g47641 FvH4_6g47642
malus_domestica MD01G1087700.v1.1 MD11G1104400.v1.1
pyrus_communis pycom05g13550 pycom11g18320
rosa_chinensis RchiOBHm_Chr1g0320361 RchiOBHm_Chr1g0321011 RchiOBHm_Chr1g0321921 RchiOBHm_Chr1g0377611 RchiOBHm_Chr1g0379061 RchiOBHm_Chr2g0106921 RchiOBHm_Chr2g0137341 RchiOBHm_Chr2g0139641 RchiOBHm_Chr2g0139651 RchiOBHm_Chr2g0144921 RchiOBHm_Chr2g0161851 RchiOBHm_Chr2g0172511 RchiOBHm_Chr3g0449931 RchiOBHm_Chr3g0452101 RchiOBHm_Chr3g0480551 RchiOBHm_Chr4g0427821 RchiOBHm_Chr4g0431861 RchiOBHm_Chr4g0435271 RchiOBHm_Chr5g0015121 RchiOBHm_Chr5g0031951 RchiOBHm_Chr5g0034331 RchiOBHm_Chr5g0059431 RchiOBHm_Chr6g0288531 RchiOBHm_Chr6g0308901 RchiOBHm_Chr7g0198801 RchiOBHm_Chr7g0198811 RchiOBHm_Chr7g0200001 RchiOBHm_Chr7g0205811 RchiOBHm_Chr7g0230921 RchiOBHm_Chr7g0233981
rosa_multiflora Rmu_sc0000475.1_g000004 Rmu_sc0000483.1_g000021 Rmu_sc0000551.1_g000007 Rmu_sc0000761.1_g000023 Rmu_sc0000898.1_g000072 Rmu_sc0001921.1_g000031 Rmu_sc0002804.1_g000009 Rmu_sc0002880.1_g000005 Rmu_sc0003207.1_g000046 Rmu_sc0003914.1_g000010 Rmu_sc0004165.1_g000089 Rmu_sc0004209.1_g000001 Rmu_sc0004402.1_g000017 Rmu_sc0004443.1_g000001 Rmu_sc0005506.1_g000007 Rmu_sc0005506.1_g000009 Rmu_sc0006443.1_g000001 Rmu_sc0008191.1_g000019 Rmu_sc0008328.1_g000004 Rmu_sc0009489.1_g000004 Rmu_sc0010368.1_g000012 Rmu_sc0010368.1_g000014 Rmu_sc0011232.1_g000005 Rmu_sc0011630.1_g000006 Rmu_sc0014780.1_g000001 Rmu_sc0028257.1_g000002 Rmu_sc0029902.1_g000001 Rmu_ssc0000386.1_g000041 Rmu_ssc0000434.1_g000020
rosa_roxburghii Rroxscaffold_2G00084750 Rroxscaffold_2G00090380 Rroxscaffold_2G00108310 Rroxscaffold_3G00235050 Rroxscaffold_3G00252220 Rroxscaffold_4G00323580 Rroxscaffold_5G00337920 Rroxscaffold_5G00370050 Rroxscaffold_7G00169180 Rroxscaffold_7G00200470
rosa_rugosa Rorug01G0156600.1 Rorug02G0305900 Rorug02G0362300 Rorug03G0111800 Rorug03G0273500 Rorug03G0340700 Rorug04G0196000 Rorug05G0251300 Rorug05G0465700 Rorug06G0031300 Rorug06G0170700 Rorug07G0226000 Rorug07G0263200
rosa_samantha Rh1CG203400 Rh1CG203500 Rh3AG212700 Rh3BG246300 Rh4BG318100 Rh6BG118800 Rh6DG105400 Rh7DG231500
rosa_wichuraiana Rw1G002740 Rw1G016740 Rw2G009190 Rw2G021330 Rw2G030170 Rw2G034650 Rw2G034990 Rw2G046190 Rw3G019490 Rw3G019500 Rw3G019510 Rw3G019990 Rw3G020480 Rw3G026090 Rw4G005490 Rw4G007090 Rw4G022920 Rw4G030140 Rw5G011030 Rw5G019330 Rw5G027260 Rw5G029990 Rw5G034080 Rw6G025080 Rw6G031390 Rw6G038690 Rw7G016630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 440
AccIII TCCGGA 1 cut(s) 871
AciI CCGC 2 cut(s) 1221, 2150
AclI AACGTT 1 cut(s) 962
AclWI GGATC 3 cut(s) 185, 198, 760
AcsI RAATTY 8 cut(s) 105, 679, 828, 950, 1201, 1580, 1678, 1719
AfaI GTAC 3 cut(s) 264, 1107, 1397
AhlI ACTAGT 1 cut(s) 509
Alw21I GWGCWC 1 cut(s) 2121
Alw26I GTCTC 7 cut(s) 423, 500, 553, 905, 928, 1340, 1495
AlwI GGATC 3 cut(s) 185, 198, 760
Aor13HI TCCGGA 1 cut(s) 871
AoxI GGCC 1 cut(s) 1255
ApeKI GCWGC 3 cut(s) 411, 1317, 1781
ApoI RAATTY 8 cut(s) 105, 679, 828, 950, 1201, 1580, 1678, 1719
ArsI GACNNNNNNTTYG 1 cut(s) 27
AseI ATTAAT 2 cut(s) 1044, 1550
Asp700I GAANNNNTTC 3 cut(s) 649, 954, 2014
AspLEI GCGC 2 cut(s) 1435, 1602
AspS9I GGNCC 2 cut(s) 248, 805
AsuC2I CCSGG 2 cut(s) 460, 988
AsuII TTCGAA 1 cut(s) 2178
AvaII GGWCC 2 cut(s) 248, 805
BaeI ACNNNNGTAYC 4 cut(s) 108, 141, 1008, 1041
BamHI GGATCC 1 cut(s) 190
BanII GRGCYC 1 cut(s) 2121
BbsI GAAGAC 2 cut(s) 310, 584
Bbv12I GWGCWC 1 cut(s) 2121
BbvCI CCTCAGC 1 cut(s) 1999
BbvI GCAGC 3 cut(s) 398, 1329, 1793
BccI CCATC 4 cut(s) 538, 1630, 1763, 1829
BceAI ACGGC 1 cut(s) 1135
BcnI CCSGG 2 cut(s) 460, 988
BcoDI GTCTC 7 cut(s) 423, 500, 553, 905, 928, 1340, 1495
BcuI ACTAGT 1 cut(s) 509
BfaI CTAG 3 cut(s) 236, 510, 551
BfmI CTRYAG 1 cut(s) 1436
BfoI RGCGCY 1 cut(s) 1436
BglII AGATCT 1 cut(s) 2168
BisI GCNGC 4 cut(s) 412, 1318, 1782, 2151
BlpI GCTNAGC 1 cut(s) 1664
BlsI GCNGC 4 cut(s) 413, 1319, 1783, 2152
Bme1390I CCNGG 2 cut(s) 460, 988
Bme18I GGWCC 2 cut(s) 248, 805
BmgT120I GGNCC 2 cut(s) 248, 805
BmiI GGNNCC 1 cut(s) 192
BmrFI CCNGG 2 cut(s) 460, 988
BmsI GCATC 7 cut(s) 432, 580, 1067, 1261, 1312, 1611, 1962
BpiI GAAGAC 2 cut(s) 310, 584
Bpu10I CCTNAGC 1 cut(s) 1999
Bpu1102I GCTNAGC 1 cut(s) 1664
Bpu14I TTCGAA 1 cut(s) 2178
BpuMI CCSGG 2 cut(s) 460, 988
BsaBI GATNNNNATC 1 cut(s) 1839
BsaI GGTCTC 1 cut(s) 423
BsaJI CCNNGG 4 cut(s) 691, 927, 987, 2079
BsaWI WCCGGW 1 cut(s) 871
Bse1I ACTGG 4 cut(s) 206, 769, 1522, 1985
Bse8I GATNNNNATC 1 cut(s) 1839
BseAI TCCGGA 1 cut(s) 871
BseDI CCNNGG 4 cut(s) 691, 927, 987, 2079
BseGI GGATG 3 cut(s) 549, 925, 1082
BseJI GATNNNNATC 1 cut(s) 1839
BseMII CTCAG 1 cut(s) 2013
BseNI ACTGG 4 cut(s) 206, 769, 1522, 1985
BseXI GCAGC 3 cut(s) 398, 1329, 1793
BsgI GTGCAG 1 cut(s) 850
Bsh1236I CGCG 1 cut(s) 440
Bsh1285I CGRYCG 1 cut(s) 1887
BshFI GGCC 1 cut(s) 1257
BsiEI CGRYCG 1 cut(s) 1887
BsiHKAI GWGCWC 1 cut(s) 2121
BsiSI CCGG 3 cut(s) 459, 872, 987
BsmAI GTCTC 7 cut(s) 423, 500, 553, 905, 928, 1340, 1495
BsmI GAATGC 1 cut(s) 2080
BsnI GGCC 1 cut(s) 1257
Bso31I GGTCTC 1 cut(s) 423
Bsp119I TTCGAA 1 cut(s) 2178
Bsp1286I GDGCHC 1 cut(s) 2121
Bsp13I TCCGGA 1 cut(s) 871
Bsp143I GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
Bsp1720I GCTNAGC 1 cut(s) 1664
Bsp19I CCATGG 1 cut(s) 927
BspACI CCGC 2 cut(s) 1221, 2150
BspANI GGCC 1 cut(s) 1257
BspCNI CTCAG 1 cut(s) 2012
BspEI TCCGGA 1 cut(s) 871
BspFNI CGCG 1 cut(s) 440
BspLI GGNNCC 1 cut(s) 192
BspPI GGATC 3 cut(s) 185, 198, 760
BspT104I TTCGAA 1 cut(s) 2178
BspTNI GGTCTC 1 cut(s) 423
BsrI ACTGG 4 cut(s) 206, 769, 1522, 1985
BssECI CCNNGG 4 cut(s) 691, 927, 987, 2079
BssMI GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
BssT1I CCWWGG 2 cut(s) 927, 2079
Bst4CI ACNGT 4 cut(s) 158, 1423, 1440, 1981
Bst6I CTCTTC 4 cut(s) 1626, 1668, 1701, 2058
BstAPI GCANNNNNTGC 1 cut(s) 2159
BstBI TTCGAA 1 cut(s) 2178
BstC8I GCNNGC 1 cut(s) 1315
BstDEI CTNAG 5 cut(s) 494, 1664, 1742, 1852, 1999
BstDSI CCRYGG 2 cut(s) 691, 927
BstF5I GGATG 3 cut(s) 549, 925, 1082
BstFNI CGCG 1 cut(s) 440
BstH2I RGCGCY 1 cut(s) 1436
BstHHI GCGC 2 cut(s) 1435, 1602
BstKTI GATC 7 cut(s) 47, 193, 768, 1741, 1893, 2051, 2171
BstMAI GTCTC 7 cut(s) 423, 500, 553, 905, 928, 1340, 1495
BstMBI GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
BstMCI CGRYCG 1 cut(s) 1887
BstMWI GCNNNNNNNGC 2 cut(s) 411, 2159
BstNSI RCATGY 1 cut(s) 1788
BstSCI CCNGG 2 cut(s) 458, 986
BstSFI CTRYAG 1 cut(s) 1436
BstUI CGCG 1 cut(s) 440
BstV1I GCAGC 3 cut(s) 398, 1329, 1793
BstV2I GAAGAC 2 cut(s) 310, 584
BstX2I RGATCY 2 cut(s) 190, 2168
BstXI CCANNNNNNTGG 2 cut(s) 201, 1953
BstYI RGATCY 2 cut(s) 190, 2168
BsuRI GGCC 1 cut(s) 1257
BtgI CCRYGG 2 cut(s) 691, 927
BtgZI GCGATG 2 cut(s) 455, 1335
BtsCI GGATG 3 cut(s) 549, 925, 1082
BtsIMutI CAGTG 1 cut(s) 163
Cac8I GCNNGC 1 cut(s) 1315
CfoI GCGC 2 cut(s) 1435, 1602
Cfr13I GGNCC 2 cut(s) 248, 805
CseI GACGC 1 cut(s) 446
Csp6I GTAC 3 cut(s) 263, 1106, 1396
CviAII CATG 8 cut(s) 266, 503, 532, 928, 1414, 1785, 1814, 1953
CviQI GTAC 3 cut(s) 263, 1106, 1396
DdeI CTNAG 5 cut(s) 494, 1664, 1742, 1852, 1999
DpnI GATC 7 cut(s) 46, 192, 767, 1740, 1892, 2050, 2170
DpnII GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
DraI TTTAAA 2 cut(s) 1684, 1869
Eam1104I CTCTTC 4 cut(s) 1626, 1668, 1701, 2058
EarI CTCTTC 4 cut(s) 1626, 1668, 1701, 2058
Ecl136II GAGCTC 1 cut(s) 2119
Eco130I CCWWGG 2 cut(s) 927, 2079
Eco147I AGGCCT 1 cut(s) 1257
Eco24I GRGCYC 1 cut(s) 2121
Eco31I GGTCTC 1 cut(s) 423
Eco32I GATATC 2 cut(s) 1126, 1570
Eco47I GGWCC 2 cut(s) 248, 805
Eco53kI GAGCTC 1 cut(s) 2119
EcoICRI GAGCTC 1 cut(s) 2119
EcoO109I RGGNCCY 1 cut(s) 248
EcoRI GAATTC 1 cut(s) 1201
EcoRV GATATC 2 cut(s) 1126, 1570
EcoT14I CCWWGG 2 cut(s) 927, 2079
EcoT22I ATGCAT 1 cut(s) 1276
EcoT38I GRGCYC 1 cut(s) 2121
ErhI CCWWGG 2 cut(s) 927, 2079
FaeI CATG 8 cut(s) 269, 506, 535, 931, 1417, 1788, 1817, 1956
FalI AAGNNNNNCTT 2 cut(s) 159, 191
FatI CATG 8 cut(s) 265, 502, 531, 927, 1413, 1784, 1813, 1952
Fnu4HI GCNGC 4 cut(s) 412, 1318, 1782, 2151
FokI GGATG 3 cut(s) 556, 932, 1089
FriOI GRGCYC 1 cut(s) 2121
Fsp4HI GCNGC 4 cut(s) 412, 1318, 1782, 2151
FspBI CTAG 3 cut(s) 236, 510, 551
GlaI GCGC 2 cut(s) 1434, 1601
GluI GCNGC 4 cut(s) 412, 1318, 1782, 2151
HaeII RGCGCY 1 cut(s) 1436
HaeIII GGCC 1 cut(s) 1257
HapII CCGG 3 cut(s) 459, 872, 987
HgaI GACGC 1 cut(s) 446
HhaI GCGC 2 cut(s) 1435, 1602
Hin1II CATG 8 cut(s) 269, 506, 535, 931, 1417, 1788, 1817, 1956
Hin6I GCGC 2 cut(s) 1433, 1600
HinP1I GCGC 2 cut(s) 1433, 1600
HinfI GANTC 9 cut(s) 20, 70, 748, 880, 898, 996, 1211, 1559, 1840
HpaII CCGG 3 cut(s) 459, 872, 987
Hpy166II GTNNAC 1 cut(s) 154
Hpy8I GTNNAC 1 cut(s) 154
HpyAV CCTTC 3 cut(s) 796, 986, 1928
HpyCH4III ACNGT 4 cut(s) 158, 1423, 1440, 1981
HpyCH4IV ACGT 2 cut(s) 962, 1830
HpyF10VI GCNNNNNNNGC 2 cut(s) 411, 2159
HpyF3I CTNAG 5 cut(s) 494, 1664, 1742, 1852, 1999
HpySE526I ACGT 2 cut(s) 962, 1830
Hsp92II CATG 8 cut(s) 269, 506, 535, 931, 1417, 1788, 1817, 1956
HspAI GCGC 2 cut(s) 1433, 1600
Kpn2I TCCGGA 1 cut(s) 871
Kzo9I GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
Lsp1109I GCAGC 3 cut(s) 398, 1329, 1793
LweI GCATC 7 cut(s) 432, 580, 1067, 1261, 1312, 1611, 1962
MaeI CTAG 3 cut(s) 236, 510, 551
MaeII ACGT 2 cut(s) 962, 1830
MaeIII GTNAC 1 cut(s) 728
MalI GATC 7 cut(s) 46, 192, 767, 1740, 1892, 2050, 2170
MboI GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
MfeI CAATTG 1 cut(s) 2094
MflI RGATCY 2 cut(s) 190, 2168
MhlI GDGCHC 1 cut(s) 2121
MlyI GAGTC 3 cut(s) 889, 907, 990
MmeI TCCRAC 2 cut(s) 832, 2092
MnlI CCTC 8 cut(s) 24, 63, 468, 829, 1049, 1663, 1683, 2008
Mph1103I ATGCAT 1 cut(s) 1276
MroI TCCGGA 1 cut(s) 871
MroXI GAANNNNTTC 3 cut(s) 649, 954, 2014
MslI CAYNNNNRTG 1 cut(s) 1626
MspA1I CMGCKG 1 cut(s) 1221
MspI CCGG 3 cut(s) 459, 872, 987
MspR9I CCNGG 2 cut(s) 460, 988
MunI CAATTG 1 cut(s) 2094
Mva1269I GAATGC 1 cut(s) 2080
MvnI CGCG 1 cut(s) 440
MwoI GCNNNNNNNGC 2 cut(s) 411, 2159
NciI CCSGG 2 cut(s) 460, 988
NcoI CCATGG 1 cut(s) 927
NdeII GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
NlaIII CATG 8 cut(s) 269, 506, 535, 931, 1417, 1788, 1817, 1956
NlaIV GGNNCC 1 cut(s) 192
NsiI ATGCAT 1 cut(s) 1276
NspI RCATGY 1 cut(s) 1788
NspV TTCGAA 1 cut(s) 2178
PceI AGGCCT 1 cut(s) 1257
PcsI WCGNNNNNNNCGW 1 cut(s) 2001
PctI GAATGC 1 cut(s) 2080
PdmI GAANNNNTTC 3 cut(s) 649, 954, 2014
PfeI GAWTC 6 cut(s) 20, 70, 748, 1211, 1559, 1840
PflFI GACNNNGTC 1 cut(s) 7
PkrI GCNGC 4 cut(s) 413, 1319, 1783, 2152
PleI GAGTC 3 cut(s) 888, 906, 990
PpsI GAGTC 3 cut(s) 888, 906, 990
PpuMI RGGWCCY 1 cut(s) 248
PshBI ATTAAT 2 cut(s) 1044, 1550
Psp124BI GAGCTC 1 cut(s) 2121
Psp1406I AACGTT 1 cut(s) 962
Psp5II RGGWCCY 1 cut(s) 248
PspN4I GGNNCC 1 cut(s) 192
PspPI GGNCC 2 cut(s) 248, 805
PspPPI RGGWCCY 1 cut(s) 248
PsuI RGATCY 2 cut(s) 190, 2168
PsyI GACNNNGTC 1 cut(s) 7
RsaI GTAC 3 cut(s) 264, 1107, 1397
RsaNI GTAC 3 cut(s) 263, 1106, 1396
RseI CAYNNNNRTG 1 cut(s) 1626
SacI GAGCTC 1 cut(s) 2121
SatI GCNGC 4 cut(s) 412, 1318, 1782, 2151
Sau3AI GATC 7 cut(s) 44, 190, 765, 1738, 1890, 2048, 2168
Sau96I GGNCC 2 cut(s) 248, 805
SchI GAGTC 3 cut(s) 889, 907, 990
ScrFI CCNGG 2 cut(s) 460, 988
SduI GDGCHC 1 cut(s) 2121
SfaNI GCATC 7 cut(s) 432, 580, 1067, 1261, 1312, 1611, 1962
SfcI CTRYAG 1 cut(s) 1436
SfuI TTCGAA 1 cut(s) 2178
SinI GGWCC 2 cut(s) 248, 805
SmiMI CAYNNNNRTG 1 cut(s) 1626
SpeI ACTAGT 1 cut(s) 509
SseBI AGGCCT 1 cut(s) 1257
SsiI CCGC 2 cut(s) 1221, 2150
SspI AATATT 4 cut(s) 211, 648, 1042, 1450
SspMI CTAG 3 cut(s) 236, 510, 551
SstI GAGCTC 1 cut(s) 2121
StuI AGGCCT 1 cut(s) 1257
StyD4I CCNGG 2 cut(s) 458, 986
StyI CCWWGG 2 cut(s) 927, 2079
TaaI ACNGT 4 cut(s) 158, 1423, 1440, 1981
TaiI ACGT 2 cut(s) 965, 1833
TaqI TCGA 8 cut(s) 240, 427, 736, 861, 935, 1572, 2121, 2178
TaqII GACCGA 1 cut(s) 1901
TatI WGTACW 1 cut(s) 1105
TauI GCSGC 1 cut(s) 2153
TfiI GAWTC 6 cut(s) 20, 70, 748, 1211, 1559, 1840
TscAI CASTG 1 cut(s) 163
TseI GCWGC 3 cut(s) 411, 1317, 1781
TspDTI ATGAA 9 cut(s) 146, 269, 353, 642, 1100, 1229, 1430, 1644, 2153
TspGWI ACGGA 2 cut(s) 203, 680
TspRI CASTG 1 cut(s) 163
Tth111I GACNNNGTC 1 cut(s) 7
VpaK11BI GGWCC 2 cut(s) 248, 805
VspI ATTAAT 2 cut(s) 1044, 1550
XapI RAATTY 8 cut(s) 105, 679, 828, 950, 1201, 1580, 1678, 1719
XceI RCATGY 1 cut(s) 1788
XmnI GAANNNNTTC 3 cut(s) 649, 954, 2014
XspI CTAG 3 cut(s) 236, 510, 551
Zsp2I ATGCAT 1 cut(s) 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.