Rw4G005490

Zinc finger MYM-type protein 1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
11103041 .. 11105446
2406 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G005490.1

Sequence Viewer

Length: 2073 bp
ATGACTGAAAATGAGAATGCAGAACTGAGTCAAGGTCTTAATGCCAATGAAAAGGATGATCTTAGTCAGCCTATAAATGAAAGTGGTGGTACAGACGAACCAAATCTTCCAGTGAATGAGGAGGAAAATATCATTGCTGAAGATGATCAAAACAAAGACTCAAGTGCAGAATTTGACTTTCCATTTGACGTTGATGATCCAGGAAATTGGGATAAGATTAAAAAGAATGTCAGAGATTTTTTAGTCGAAAGAGGTCCTAAAAGAGAGAATGATCTTACCTTTCTGGTTGATGACTTGGGGAGGCATTTCAGTTCCACACATTATTTTCGTGTCTTTCCTAATGGTGAAAAGAAGAACAGGAGGTGGTTAATTTACTCAGTTTCGTTAGACAAGGTATTTTGCTTTTGTTGTAAATTGTTCAAGCAAGACCACAACAAGACTTTATTAGGTCAATTGGCTGATGGAGGATTGAATGATTGGAAAAATATGAGTGCAAGGCTTGCAAGTCATGAAAGAAATAGTCAACACATCAGTTGCTTTACTAGTTGGATTGAATTGGAAACAAGATTGAAAAAGAATGCAACAATTGATCAAGCTGTGGAAGAACAAATAAAGAAGGAGAGAGAACATTGGAGACAGGTACTCTTGAGAATCCTAACTGTTGTGAAAAGACTTGCGAAAAATAATTTGGCATTTCGTGGGGATAATGAGAAATTGTATGAGGAGAACAATGGGATTTTCTTACAAGTGATTGAGATGGCTGCTGAATTTGATCCTGTTATGCAAGAACATGTAAAAACTTCCATCATTGCAACAATCAAAGAAGCAAAGTACTTTTCAGTTATACTTGATTGCACTCCAGATGCAAGTCATGAGGAACAAATGTCCCTAGTTGGCCGCTGTGTTGATGTTATAGCAAGTCCGATTGTGGTAAGAGAATTTTTTTTAGAGTTTATAAAGGTGGATGATACATCGGGGCTTGGACTGTTTAATGAGCTTACAAATGCATTCAACACTCTTACACTTGACATTGGTGATATACGAGGACAGGGATATGACAATGGCTCCAATATGAGAGGAAAACACAAGGGTGTGCAGAGAAGACTCCTTGAGGTAAATCCTAGAGCATTATATACGCCTTGTGGTTGTCATAGTTTGAATCTTGCAATATGTGATATGGCTAATTCTCCCCAAATAAGAGATGCTTTAGCTTACATGGCAAAAAATGGTGATGACTCCAAAACAAGGTCTGATGCCGAATGCATGGCAACATATGAAATGGAGAATTTTGAATTCTTGTTCGGCATGGTTATTTGGTATGATTTGTTGCTTGCTATCAATAATGTCAGTAAAATTCTTCAGACTGAAGACATGCATATTGATGTTGCTATCGAAGAATTGGAAAATCTTATTTCATTTATGCAGAACTATAGAGAAACTGGATTTGATGAGGCCTTGACCATAGCTAAAAAAATTGCAAGTGAGATGAAAATTGAAGCCGTATTCCCTGAAAAGAGAACTGTTCGGAAAAAGAAGCATTTTGATGATAGCGACAATGAAGAAGAGGTGACCCAATCAGCTTTGGAATCATTTAAGAAGTATGAGGAAGATTTTGGATTTTTATTTAATTTGGAGAAGTTGAAGTGTCTAGATAATAAAAGTTTGATGAACTATTGTATGAATCTTGAAGATTTGTTGAAGGATTCTGATGTTTCTGACATTAATGGGAGTGATCTATTTTCTGAGTTGCGCTACTTGAAAGGAGTCATACCAAAAGAAACAAAAGGGGCAGTTGGAGTATTGAACTACTTGAAGCAAATGGATGGTTGTTACCCAAATGCTTGGATTGCTTACAGAATTTTGTTAACCATACCGGTTACTGTTGCCTCTGCTGAGAGAAGCTTTTCAAAATTGAAGTTGATCAAGTCTTATCTTCGATCAACTATGTCACAGGAAAGACTGAATGGTTTAGCTATGTTATCAATTGAAAAAGATTTAGTCGAAAAGCTTGAATATTCAAGCTTAATTGAAACTTTTGCAGCTAAGAATGCAAGAAGGGTAATTTTTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

690

Amino Acids

79.05

Weight (kDa)

5.05

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 263 - 364 3.6e-13 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 597 - 666 4.8e-19 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35150 AT2G06500 AT2G16040 AT2G19960 AT2G19960 AT3G29638 AT3G29794 AT4G10200 AT4G10200 AT5G35475
fragaria_vesca FvH4_1g08455 FvH4_1g08761 FvH4_1g10851 FvH4_1g17271 FvH4_1g26762 FvH4_2g15031 FvH4_2g18762 FvH4_2g29241 FvH4_2g32571 FvH4_4g01531 FvH4_4g12942 FvH4_4g14421 FvH4_4g14431 FvH4_4g14434 FvH4_5g30891 FvH4_6g47641 FvH4_6g47642
malus_domestica MD01G1087700.v1.1 MD11G1104400.v1.1
pyrus_communis pycom05g13550 pycom11g18320
rosa_chinensis RchiOBHm_Chr1g0320361 RchiOBHm_Chr1g0321011 RchiOBHm_Chr1g0321921 RchiOBHm_Chr1g0377611 RchiOBHm_Chr1g0379061 RchiOBHm_Chr2g0106921 RchiOBHm_Chr2g0137341 RchiOBHm_Chr2g0139641 RchiOBHm_Chr2g0139651 RchiOBHm_Chr2g0144921 RchiOBHm_Chr2g0161851 RchiOBHm_Chr2g0172511 RchiOBHm_Chr3g0449931 RchiOBHm_Chr3g0452101 RchiOBHm_Chr3g0480551 RchiOBHm_Chr4g0427821 RchiOBHm_Chr4g0431861 RchiOBHm_Chr4g0435271 RchiOBHm_Chr5g0015121 RchiOBHm_Chr5g0031951 RchiOBHm_Chr5g0034331 RchiOBHm_Chr5g0059431 RchiOBHm_Chr6g0288531 RchiOBHm_Chr6g0308901 RchiOBHm_Chr7g0198801 RchiOBHm_Chr7g0198811 RchiOBHm_Chr7g0200001 RchiOBHm_Chr7g0205811 RchiOBHm_Chr7g0230921 RchiOBHm_Chr7g0233981
rosa_multiflora Rmu_sc0000475.1_g000004 Rmu_sc0000483.1_g000021 Rmu_sc0000551.1_g000007 Rmu_sc0000761.1_g000023 Rmu_sc0000898.1_g000072 Rmu_sc0001921.1_g000031 Rmu_sc0002804.1_g000009 Rmu_sc0002880.1_g000005 Rmu_sc0003207.1_g000046 Rmu_sc0003914.1_g000010 Rmu_sc0004165.1_g000089 Rmu_sc0004209.1_g000001 Rmu_sc0004402.1_g000017 Rmu_sc0004443.1_g000001 Rmu_sc0005506.1_g000007 Rmu_sc0005506.1_g000009 Rmu_sc0006443.1_g000001 Rmu_sc0008191.1_g000019 Rmu_sc0008328.1_g000004 Rmu_sc0009489.1_g000004 Rmu_sc0010368.1_g000012 Rmu_sc0010368.1_g000014 Rmu_sc0011232.1_g000005 Rmu_sc0011630.1_g000006 Rmu_sc0014780.1_g000001 Rmu_sc0028257.1_g000002 Rmu_sc0029902.1_g000001 Rmu_ssc0000386.1_g000041 Rmu_ssc0000434.1_g000020
rosa_roxburghii Rroxscaffold_2G00084750 Rroxscaffold_2G00090380 Rroxscaffold_2G00108310 Rroxscaffold_3G00235050 Rroxscaffold_3G00252220 Rroxscaffold_4G00323580 Rroxscaffold_5G00337920 Rroxscaffold_5G00370050 Rroxscaffold_7G00169180 Rroxscaffold_7G00200470
rosa_rugosa Rorug01G0156600.1 Rorug02G0305900 Rorug02G0362300 Rorug03G0111800 Rorug03G0273500 Rorug03G0340700 Rorug04G0196000 Rorug05G0251300 Rorug05G0465700 Rorug06G0031300 Rorug06G0170700 Rorug07G0226000 Rorug07G0263200
rosa_samantha Rh1CG203400 Rh1CG203500 Rh3AG212700 Rh3BG246300 Rh4BG318100 Rh6BG118800 Rh6DG105400 Rh7DG231500
rosa_wichuraiana Rw1G002740 Rw1G016740 Rw2G009190 Rw2G021330 Rw2G030170 Rw2G034650 Rw2G034990 Rw2G046190 Rw3G019490 Rw3G019500 Rw3G019510 Rw3G019990 Rw3G020480 Rw3G026090 Rw4G005490 Rw4G007090 Rw4G022920 Rw4G030140 Rw5G011030 Rw5G019330 Rw5G027260 Rw5G029990 Rw5G034080 Rw6G025080 Rw6G031390 Rw6G038690 Rw7G016630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 956
AciI CCGC 1 cut(s) 898
AclWI GGATC 2 cut(s) 191, 767
AcoI YGGCCR 1 cut(s) 895
AcsI RAATTY 7 cut(s) 170, 767, 938, 1285, 1292, 1353, 1857
AcuI CTGAAG 3 cut(s) 159, 1343, 1386
AfaI GTAC 3 cut(s) 91, 642, 833
AfiI CCNNNNNNNGG 1 cut(s) 1245
AflIII ACRYGT 1 cut(s) 790
AgeI ACCGGT 1 cut(s) 1873
AhlI ACTAGT 1 cut(s) 542
AjnI CCWGG 1 cut(s) 199
AjuI GAANNNNNNNTTGG 2 cut(s) 671, 703
AleI CACNNNNGTG 1 cut(s) 1089
Alw26I GTCTC 1 cut(s) 628
AlwI GGATC 2 cut(s) 191, 767
AoxI GGCC 2 cut(s) 895, 1452
ApeKI GCWGC 2 cut(s) 761, 2039
ApoI RAATTY 7 cut(s) 170, 767, 938, 1285, 1292, 1353, 1857
ArsI GACNNNNNNTTYG 2 cut(s) 167, 199
AseI ATTAAT 1 cut(s) 1722
AsiGI ACCGGT 1 cut(s) 1873
Asp700I GAANNNNTTC 1 cut(s) 1903
AspLEI GCGC 1 cut(s) 1752
AspS9I GGNCC 1 cut(s) 254
AsuHPI GGTGA 4 cut(s) 356, 1046, 1241, 1579
AvaII GGWCC 1 cut(s) 254
BbsI GAAGAC 2 cut(s) 1108, 1374
BbvI GCAGC 2 cut(s) 748, 2051
BccI CCATC 4 cut(s) 455, 751, 812, 1817
BceAI ACGGC 1 cut(s) 1484
BciT130I CCWGG 1 cut(s) 201
BclI TGATCA 3 cut(s) 145, 589, 1920
BcoDI GTCTC 1 cut(s) 628
BcuI ACTAGT 1 cut(s) 542
BfaI CTAG 4 cut(s) 543, 890, 1122, 1649
BfmI CTRYAG 1 cut(s) 1429
BisI GCNGC 3 cut(s) 762, 898, 2040
BlsI GCNGC 3 cut(s) 763, 899, 2041
BmcAI AGTACT 1 cut(s) 833
Bme1390I CCNGG 1 cut(s) 201
Bme18I GGWCC 1 cut(s) 254
BmgT120I GGNCC 1 cut(s) 254
BmiI GGNNCC 1 cut(s) 1066
BmrFI CCNGG 1 cut(s) 201
BmsI GCATC 3 cut(s) 853, 1192, 1243
BpiI GAAGAC 2 cut(s) 1108, 1374
BpmI CTGGAG 1 cut(s) 843
BpuEI CTTGAG 3 cut(s) 145, 667, 1130
BsaWI WCCGGW 1 cut(s) 1873
BsaXI ACNNNNNCTCC 2 cut(s) 1049, 1079
Bsc4I CCNNNNNNNGG 1 cut(s) 1245
Bse118I RCCGGY 1 cut(s) 1873
Bse1I ACTGG 2 cut(s) 110, 1444
Bse3DI GCAATG 2 cut(s) 132, 807
BseBI CCWGG 1 cut(s) 201
BseGI GGATG 3 cut(s) 61, 970, 1828
BseLI CCNNNNNNNGG 1 cut(s) 1245
BseMI GCAATG 2 cut(s) 132, 807
BseMII CTCAG 4 cut(s) 17, 390, 1734, 1884
BseNI ACTGG 2 cut(s) 110, 1444
BseRI GAGGAG 2 cut(s) 134, 737
BseXI GCAGC 2 cut(s) 748, 2051
BsgI GTGCAG 2 cut(s) 186, 1115
BshFI GGCC 2 cut(s) 897, 1454
BshTI ACCGGT 1 cut(s) 1873
BsiSI CCGG 1 cut(s) 1874
BslFI GGGAC 1 cut(s) 871
BslI CCNNNNNNNGG 1 cut(s) 1245
BsmAI GTCTC 1 cut(s) 628
BsmFI GGGAC 1 cut(s) 871
BsmI GAATGC 5 cut(s) 22, 583, 1007, 1265, 2053
BsnI GGCC 2 cut(s) 897, 1454
Bsp143I GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
BspACI CCGC 1 cut(s) 898
BspANI GGCC 2 cut(s) 897, 1454
BspCNI CTCAG 4 cut(s) 18, 389, 1735, 1885
BspHI TCATGA 2 cut(s) 508, 871
BspLI GGNNCC 1 cut(s) 1066
BspPI GGATC 2 cut(s) 191, 767
BsrDI GCAATG 2 cut(s) 132, 807
BsrFI RCCGGY 1 cut(s) 1873
BsrI ACTGG 2 cut(s) 110, 1444
BssAI RCCGGY 1 cut(s) 1873
BssMI GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
Bst2UI CCWGG 1 cut(s) 201
Bst4CI ACNGT 4 cut(s) 661, 987, 1522, 1882
Bst6I CTCTTC 1 cut(s) 1557
BstAPI GCANNNNNTGC 1 cut(s) 500
BstC8I GCNNGC 2 cut(s) 501, 1332
BstDEI CTNAG 6 cut(s) 26, 62, 376, 1743, 1893, 2043
BstEII GGTNACC 1 cut(s) 1567
BstF5I GGATG 3 cut(s) 61, 970, 1828
BstHHI GCGC 1 cut(s) 1752
BstKTI GATC 9 cut(s) 61, 148, 199, 274, 592, 775, 1735, 1923, 1940
BstMAI GTCTC 1 cut(s) 628
BstMBI GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
BstMWI GCNNNNNNNGC 4 cut(s) 500, 1217, 1847, 2048
BstNI CCWGG 1 cut(s) 201
BstNSI RCATGY 2 cut(s) 794, 1375
BstPI GGTNACC 1 cut(s) 1567
BstSCI CCNGG 1 cut(s) 199
BstSFI CTRYAG 1 cut(s) 1429
BstV1I GCAGC 2 cut(s) 748, 2051
BstV2I GAAGAC 2 cut(s) 1108, 1374
BstXI CCANNNNNNTGG 2 cut(s) 207, 1842
BsuRI GGCC 2 cut(s) 897, 1454
BtsCI GGATG 3 cut(s) 61, 970, 1828
BtsIMutI CAGTG 1 cut(s) 117
Cac8I GCNNGC 2 cut(s) 501, 1332
CciI TCATGA 2 cut(s) 508, 871
CfoI GCGC 1 cut(s) 1752
Cfr10I RCCGGY 1 cut(s) 1873
Cfr13I GGNCC 1 cut(s) 254
Csp6I GTAC 3 cut(s) 90, 641, 832
CspAI ACCGGT 1 cut(s) 1873
CviAII CATG 7 cut(s) 509, 791, 872, 1216, 1264, 1306, 1372
CviQI GTAC 3 cut(s) 90, 641, 832
DdeI CTNAG 6 cut(s) 26, 62, 376, 1743, 1893, 2043
DpnI GATC 9 cut(s) 60, 147, 198, 273, 591, 774, 1734, 1922, 1939
DpnII GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
EaeI YGGCCR 1 cut(s) 895
Eam1104I CTCTTC 1 cut(s) 1557
EarI CTCTTC 1 cut(s) 1557
Eco147I AGGCCT 1 cut(s) 1454
Eco47I GGWCC 1 cut(s) 254
Eco57I CTGAAG 3 cut(s) 159, 1343, 1386
Eco91I GGTNACC 1 cut(s) 1567
EcoO109I RGGNCCY 1 cut(s) 254
EcoO65I GGTNACC 1 cut(s) 1567
EcoRI GAATTC 1 cut(s) 1292
EcoRII CCWGG 1 cut(s) 199
EcoT22I ATGCAT 3 cut(s) 1009, 1265, 1377
FaeI CATG 7 cut(s) 512, 794, 875, 1219, 1267, 1309, 1375
FalI AAGNNNNNCTT 2 cut(s) 1189, 1221
FaqI GGGAC 1 cut(s) 871
FatI CATG 7 cut(s) 508, 790, 871, 1215, 1263, 1305, 1371
FauNDI CATATG 1 cut(s) 1273
FbaI TGATCA 3 cut(s) 145, 589, 1920
Fnu4HI GCNGC 3 cut(s) 762, 898, 2040
FokI GGATG 3 cut(s) 68, 977, 1835
Fsp4HI GCNGC 3 cut(s) 762, 898, 2040
FspBI CTAG 4 cut(s) 543, 890, 1122, 1649
GlaI GCGC 1 cut(s) 1751
GluI GCNGC 3 cut(s) 762, 898, 2040
GsuI CTGGAG 1 cut(s) 843
HaeIII GGCC 2 cut(s) 897, 1454
HapII CCGG 1 cut(s) 1874
HhaI GCGC 1 cut(s) 1752
Hin1II CATG 7 cut(s) 512, 794, 875, 1219, 1267, 1309, 1375
Hin6I GCGC 1 cut(s) 1750
HinP1I GCGC 1 cut(s) 1750
HincII GTYRAC 2 cut(s) 524, 1866
HindII GTYRAC 2 cut(s) 524, 1866
HindIII AAGCTT 3 cut(s) 1900, 2006, 2020
HpaI GTTAAC 1 cut(s) 1866
HpaII CCGG 1 cut(s) 1874
HphI GGTGA 4 cut(s) 356, 1046, 1241, 1579
Hpy166II GTNNAC 2 cut(s) 524, 1866
Hpy188I TCNGA 8 cut(s) 233, 924, 1252, 1362, 1527, 1708, 1717, 1744
Hpy188III TCNNGA 6 cut(s) 509, 646, 860, 872, 1649, 1685
Hpy8I GTNNAC 2 cut(s) 524, 1866
HpyAV CCTTC 3 cut(s) 610, 1693, 2049
HpyCH4III ACNGT 4 cut(s) 661, 987, 1522, 1882
HpyCH4IV ACGT 1 cut(s) 189
HpyF10VI GCNNNNNNNGC 4 cut(s) 500, 1217, 1847, 2048
HpyF3I CTNAG 6 cut(s) 26, 62, 376, 1743, 1893, 2043
HpySE526I ACGT 1 cut(s) 189
Hsp92II CATG 7 cut(s) 512, 794, 875, 1219, 1267, 1309, 1375
HspAI GCGC 1 cut(s) 1750
Ksp22I TGATCA 3 cut(s) 145, 589, 1920
KspAI GTTAAC 1 cut(s) 1866
Kzo9I GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
LmnI GCTCC 1 cut(s) 1070
Lsp1109I GCAGC 2 cut(s) 748, 2051
LweI GCATC 3 cut(s) 853, 1192, 1243
MaeI CTAG 4 cut(s) 543, 890, 1122, 1649
MaeII ACGT 1 cut(s) 189
MaeIII GTNAC 4 cut(s) 1567, 1829, 1876, 1947
MalI GATC 9 cut(s) 60, 147, 198, 273, 591, 774, 1734, 1922, 1939
MboI GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
MfeI CAATTG 3 cut(s) 452, 585, 1983
MlyI GAGTC 5 cut(s) 37, 152, 1098, 1229, 1773
MmeI TCCRAC 2 cut(s) 527, 1774
Mph1103I ATGCAT 3 cut(s) 1009, 1265, 1377
MroXI GAANNNNTTC 1 cut(s) 1903
MseI TTAA 9 cut(s) 39, 219, 368, 990, 1593, 1626, 1722, 1865, 2024
MslI CAYNNNNRTG 3 cut(s) 1089, 1380, 1542
MspA1I CMGCKG 1 cut(s) 900
MspI CCGG 1 cut(s) 1874
MspR9I CCNGG 1 cut(s) 201
MunI CAATTG 3 cut(s) 452, 585, 1983
Mva1269I GAATGC 5 cut(s) 22, 583, 1007, 1265, 2053
MvaI CCWGG 1 cut(s) 201
MwoI GCNNNNNNNGC 4 cut(s) 500, 1217, 1847, 2048
NdeI CATATG 1 cut(s) 1273
NdeII GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
NlaIII CATG 7 cut(s) 512, 794, 875, 1219, 1267, 1309, 1375
NlaIV GGNNCC 1 cut(s) 1066
NmuCI GTSAC 2 cut(s) 1567, 1947
NsiI ATGCAT 3 cut(s) 1009, 1265, 1377
NspI RCATGY 2 cut(s) 794, 1375
OliI CACNNNNGTG 1 cut(s) 1089
PagI TCATGA 2 cut(s) 508, 871
PceI AGGCCT 1 cut(s) 1454
PciI ACATGT 1 cut(s) 790
PctI GAATGC 5 cut(s) 22, 583, 1007, 1265, 2053
PdmI GAANNNNTTC 1 cut(s) 1903
PfeI GAWTC 5 cut(s) 651, 1159, 1586, 1681, 1703
PfoI TCCNGGA 1 cut(s) 199
PinAI ACCGGT 1 cut(s) 1873
PkrI GCNGC 3 cut(s) 763, 899, 2041
PleI GAGTC 5 cut(s) 36, 152, 1098, 1229, 1772
PpsI GAGTC 5 cut(s) 36, 152, 1098, 1229, 1772
PpuMI RGGWCCY 1 cut(s) 254
PscI ACATGT 1 cut(s) 790
PshBI ATTAAT 1 cut(s) 1722
PsiI TTATAA 1 cut(s) 956
Psp5II RGGWCCY 1 cut(s) 254
Psp6I CCWGG 1 cut(s) 199
PspEI GGTNACC 1 cut(s) 1567
PspGI CCWGG 1 cut(s) 199
PspN4I GGNNCC 1 cut(s) 1066
PspPI GGNCC 1 cut(s) 254
PspPPI RGGWCCY 1 cut(s) 254
RsaI GTAC 3 cut(s) 91, 642, 833
RsaNI GTAC 3 cut(s) 90, 641, 832
RseI CAYNNNNRTG 3 cut(s) 1089, 1380, 1542
SaqAI TTAA 9 cut(s) 39, 219, 368, 990, 1593, 1626, 1722, 1865, 2024
SatI GCNGC 3 cut(s) 762, 898, 2040
Sau3AI GATC 9 cut(s) 58, 145, 196, 271, 589, 772, 1732, 1920, 1937
Sau96I GGNCC 1 cut(s) 254
ScaI AGTACT 1 cut(s) 833
SchI GAGTC 5 cut(s) 37, 152, 1098, 1229, 1773
ScrFI CCNGG 1 cut(s) 201
SfaNI GCATC 3 cut(s) 853, 1192, 1243
SfcI CTRYAG 1 cut(s) 1429
SinI GGWCC 1 cut(s) 254
SmiMI CAYNNNNRTG 3 cut(s) 1089, 1380, 1542
SmlI CTYRAG 3 cut(s) 160, 646, 1109
SmoI CTYRAG 3 cut(s) 160, 646, 1109
SpeI ACTAGT 1 cut(s) 542
SseBI AGGCCT 1 cut(s) 1454
SsiI CCGC 1 cut(s) 898
SspI AATATT 1 cut(s) 2015
SspMI CTAG 4 cut(s) 543, 890, 1122, 1649
StuI AGGCCT 1 cut(s) 1454
StyD4I CCNGG 1 cut(s) 199
TaaI ACNGT 4 cut(s) 661, 987, 1522, 1882
TaiI ACGT 1 cut(s) 192
TaqI TCGA 4 cut(s) 246, 1392, 1936, 2001
TatI WGTACW 1 cut(s) 831
TauI GCSGC 1 cut(s) 900
TfiI GAWTC 5 cut(s) 651, 1159, 1586, 1681, 1703
Tru1I TTAA 9 cut(s) 39, 219, 368, 990, 1593, 1626, 1722, 1865, 2024
Tru9I TTAA 9 cut(s) 39, 219, 368, 990, 1593, 1626, 1722, 1865, 2024
TscAI CASTG 1 cut(s) 117
TseFI GTSAC 2 cut(s) 1567, 1947
TseI GCWGC 2 cut(s) 761, 2039
Tsp45I GTSAC 2 cut(s) 1567, 1947
TspDTI ATGAA 9 cut(s) 63, 93, 525, 1290, 1404, 1502, 1572, 1682, 1694
TspRI CASTG 1 cut(s) 117
VpaK11BI GGWCC 1 cut(s) 254
VspI ATTAAT 1 cut(s) 1722
XapI RAATTY 7 cut(s) 170, 767, 938, 1285, 1292, 1353, 1857
XbaI TCTAGA 1 cut(s) 1648
XceI RCATGY 2 cut(s) 794, 1375
XmnI GAANNNNTTC 1 cut(s) 1903
XspI CTAG 4 cut(s) 543, 890, 1122, 1649
ZrmI AGTACT 1 cut(s) 833
Zsp2I ATGCAT 3 cut(s) 1009, 1265, 1377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.