FvH4_1g08761

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000215
Physical Location & Seq
Forward (+)
4663341 .. 4666958
3618 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08761.t1

Sequence Viewer

Length: 2325 bp
ATGCCTCCCACTAGGAAGTTTGAGTCCGGCCATGCCAAACGCCAAAAAAAGAGAAAAGAAGAGTGTTTCAAGAAAAGTCAAAGTGGAGCTCTGGATAAATTTGTTTTCAAACGACCACAATGTGAAGAGAATCAGTCTAAAAAGAATGATATGAATTTCAATAATGTTGAAAATAATGTGGAGGATCCTATTGGGGCAGTAGATACTGAAAATGTTGAGGATCTTATGCAAGAAGAAACTATAGAAGAAGAAGATGATGCTGAAAATGTGGAGGATCCCATGCAAGAGGAACCTATGGAAGAAGAAGATGATGTGCCTATAGAGGAGCCTAGTTTGAACAGTAATGATGGTGATATTCCGTTCAACATCAATGATCCTAGAAATTGGGATAATCTTGATGCTAAATGGAGGGACTTATTGGTGAAAAATGGTCCGGTAAGAGACATGTTAACAGGGAAAGGTCCCAAAGATGGACTGAAAAGGCGTTTCTCCTCTGAATTTTACAGTAAGTACTTACCAAATGGAGAGAAGCATCATCGAGATTGGCTTGTGTATTCAAAGGATCTTGACAAAGTCTTTTGCTTCTGTTGTAAATTGTTCAAGAACAAACCACTACCAAGTCAGTTAGCACATGATGGATTAAGAGATTGGGGACATCTTGCTTTCAGCTTGAAAACACATGAGAGAAGTCCAGAGCATGTCAACAATATGTTCATTTGGGTGGATTTACGTTTAAGGCTAGAAGGTAATCAAGTCATTGACAAAGTTTTGCAGCACCAAATCAGCAAAGAGACTAAACATTGGAGGAAGGTACTACGACGATTGTTTGCAATAGTAAAATATTTGGCTAAACAGAGTTTGGCATTTCGTGGAAATAATGAGAGAATCTATGAAGAAAGTAATGGAAATTTTATGGCTTTAGTTGAAATGGTTGCTGAGTGGGATTCGACCTTGAAGGAGCATATCAGAAGGAAACAAAATCATGAGATTCAGTACCATTATCTAAGTCACAAGGTGCAAAATGAGTTGATAAAGGCAGTAGCTTCTGAAATTAAAGGTTCAATCCTACAAAAAATAAAAGAAGCCAAGTATTTTTCAGTAATACTCGATTGCACTCCTGATGTGAGCAAGCAAGAACAGATGACGCTGATATTAAGGTGTGTTGATGTCTCTACAATTCCAATAAAGGTACACGAGTATTTTGTAGAGTTTTTGGTTGTGAATGACACAACTGGTCAAGGTTTGTTTGAAGAGTTGCAAAATGTGCTACACCATCTTGATCTTGATATTGATAATGTTAGAGGGCAAGCCTATGATAACGGGTCAAACATGAAGGGGAAACACAAAGGTGTGCAAAGGAAGCTTTTGGACATCAATCCTAGAGCATTTTATACACCTTGTGGTTCTCATTCTCTCAATTTGACTCTATCAGATGTAGCAAAATGTTGTGATAAAGCAGACTTGTTTTTTGGAGTTGTTCAACGTATTTATACATTGTTTGCAGATTCTACAAAGAGGTGGAAGATTTTGACAGACAACATATCAGAAAAAGGTTTCACTCTGAAATCTTTGTCAACTACACGGTGGGAAAGTAGAATTGACAGTGTGAAAGCAATTGTGACTCAAGCTCCTGAAATAAGAGAAGCTCTACTTGATCTTGCCGAGAATGAGACAGATTCAAGTATTAAAAGTCAAGCTACTTGTTTAGCGGAGGATGAACTTGGAAAATATGAGTTCATTGTAGGCATGGTAATTTGGTATCACATCTTGGCTAAAGTTAATATAGTCAGCAAAGAATTACAATCTGAAAATATGCGAATTGATGTGGCAATGGATAGTGTGCATGCATTGATTGCTTTTTTTAAAGAGTACCGAGAAGTTGGATTTGAGAAGGCTTTGAATTGTGCTAAAGAAATTGCTGCTGAATTGGAAATTGATCCAGTGTTTCCTGAGCTAAAGAAAAAAAGAAGAGTCCGTAAGAAAAAACATTTTGATGAGATTTCCACTGCTGAGATTGCCACTGAGTCAACTGAACCGGTCCATGAAGAATCAGCTGAAGAATCCTTCAGAATTCATTACTTTGTTTACATAATTGATCAAGCAATCGGTTCATTAGAGAGGAGGTTTGAACAATATAAGCAATATGAAGAGACCTTTGGCTTCTTGTTCACAGCAAAGAAGTTAAAATCATTGGATGCTGAAGAGTTGAAGACAAGCTGCAACAACCTTGAACAGAAGTTACAGAATAACCACATTTCAGACATTGAAGATGGAAGACTATGCCTCAGTTCATTTGATTTTGGTTTGTATAACTCAGAAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

775

Amino Acids

89.8

Weight (kDa)

5.62

Isoelectric Point (pI)

49.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 250 - 450 4.1e-19 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35150 AT2G06500 AT2G16040 AT2G19960 AT2G19960 AT3G29638 AT3G29794 AT4G10200 AT4G10200 AT5G35475
fragaria_vesca FvH4_1g08455 FvH4_1g08761 FvH4_1g10851 FvH4_1g17271 FvH4_1g26762 FvH4_2g15031 FvH4_2g18762 FvH4_2g29241 FvH4_2g32571 FvH4_4g01531 FvH4_4g12942 FvH4_4g14421 FvH4_4g14431 FvH4_4g14434 FvH4_5g30891 FvH4_6g47641 FvH4_6g47642
malus_domestica MD01G1087700.v1.1 MD11G1104400.v1.1
pyrus_communis pycom05g13550 pycom11g18320
rosa_chinensis RchiOBHm_Chr1g0320361 RchiOBHm_Chr1g0321011 RchiOBHm_Chr1g0321921 RchiOBHm_Chr1g0377611 RchiOBHm_Chr1g0379061 RchiOBHm_Chr2g0106921 RchiOBHm_Chr2g0137341 RchiOBHm_Chr2g0139641 RchiOBHm_Chr2g0139651 RchiOBHm_Chr2g0144921 RchiOBHm_Chr2g0161851 RchiOBHm_Chr2g0172511 RchiOBHm_Chr3g0449931 RchiOBHm_Chr3g0452101 RchiOBHm_Chr3g0480551 RchiOBHm_Chr4g0427821 RchiOBHm_Chr4g0431861 RchiOBHm_Chr4g0435271 RchiOBHm_Chr5g0015121 RchiOBHm_Chr5g0031951 RchiOBHm_Chr5g0034331 RchiOBHm_Chr5g0059431 RchiOBHm_Chr6g0288531 RchiOBHm_Chr6g0308901 RchiOBHm_Chr7g0198801 RchiOBHm_Chr7g0198811 RchiOBHm_Chr7g0200001 RchiOBHm_Chr7g0205811 RchiOBHm_Chr7g0230921 RchiOBHm_Chr7g0233981
rosa_multiflora Rmu_sc0000475.1_g000004 Rmu_sc0000483.1_g000021 Rmu_sc0000551.1_g000007 Rmu_sc0000761.1_g000023 Rmu_sc0000898.1_g000072 Rmu_sc0001921.1_g000031 Rmu_sc0002804.1_g000009 Rmu_sc0002880.1_g000005 Rmu_sc0003207.1_g000046 Rmu_sc0003914.1_g000010 Rmu_sc0004165.1_g000089 Rmu_sc0004209.1_g000001 Rmu_sc0004402.1_g000017 Rmu_sc0004443.1_g000001 Rmu_sc0005506.1_g000007 Rmu_sc0005506.1_g000009 Rmu_sc0006443.1_g000001 Rmu_sc0008191.1_g000019 Rmu_sc0008328.1_g000004 Rmu_sc0009489.1_g000004 Rmu_sc0010368.1_g000012 Rmu_sc0010368.1_g000014 Rmu_sc0011232.1_g000005 Rmu_sc0011630.1_g000006 Rmu_sc0014780.1_g000001 Rmu_sc0028257.1_g000002 Rmu_sc0029902.1_g000001 Rmu_ssc0000386.1_g000041 Rmu_ssc0000434.1_g000020
rosa_roxburghii Rroxscaffold_2G00084750 Rroxscaffold_2G00090380 Rroxscaffold_2G00108310 Rroxscaffold_3G00235050 Rroxscaffold_3G00252220 Rroxscaffold_4G00323580 Rroxscaffold_5G00337920 Rroxscaffold_5G00370050 Rroxscaffold_7G00169180 Rroxscaffold_7G00200470
rosa_rugosa Rorug01G0156600.1 Rorug02G0305900 Rorug02G0362300 Rorug03G0111800 Rorug03G0273500 Rorug03G0340700 Rorug04G0196000 Rorug05G0251300 Rorug05G0465700 Rorug06G0031300 Rorug06G0170700 Rorug07G0226000 Rorug07G0263200
rosa_samantha Rh1CG203400 Rh1CG203500 Rh3AG212700 Rh3BG246300 Rh4BG318100 Rh6BG118800 Rh6DG105400 Rh7DG231500
rosa_wichuraiana Rw1G002740 Rw1G016740 Rw2G009190 Rw2G021330 Rw2G030170 Rw2G034650 Rw2G034990 Rw2G046190 Rw3G019490 Rw3G019500 Rw3G019510 Rw3G019990 Rw3G020480 Rw3G026090 Rw4G005490 Rw4G007090 Rw4G022920 Rw4G030140 Rw5G011030 Rw5G019330 Rw5G027260 Rw5G029990 Rw5G034080 Rw6G025080 Rw6G031390 Rw6G038690 Rw7G016630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 1709
AclWI GGATC 8 cut(s) 179, 192, 228, 269, 282, 368, 570, 1931
AcoI YGGCCR 1 cut(s) 28
AcsI RAATTY 5 cut(s) 98, 154, 497, 907, 2070
AcuI CTGAAG 3 cut(s) 2050, 2076, 2220
AdeI CACNNNGTG 3 cut(s) 122, 1015, 1400
AfaI GTAC 5 cut(s) 512, 813, 995, 1191, 1871
AfiI CCNNNNNNNGG 1 cut(s) 470
AflIII ACRYGT 1 cut(s) 444
AgeI ACCGGT 1 cut(s) 2035
AjuI GAANNNNNNNTTGG 2 cut(s) 2139, 2171
AleI CACNNNNGTG 1 cut(s) 1347
Alw21I GWGCWC 1 cut(s) 91
Alw26I GTCTC 5 cut(s) 435, 785, 1174, 1664, 2144
AlwI GGATC 8 cut(s) 179, 192, 228, 269, 282, 368, 570, 1931
AoxI GGCC 1 cut(s) 28
ApeKI GCWGC 3 cut(s) 772, 1919, 2217
ApoI RAATTY 5 cut(s) 98, 154, 497, 907, 2070
ArsI GACNNNNNNTTYG 2 cut(s) 1451, 1483
AsiGI ACCGGT 1 cut(s) 2035
AspS9I GGNCC 3 cut(s) 431, 461, 2038
AsuHPI GGTGA 2 cut(s) 362, 433
AvaII GGWCC 3 cut(s) 431, 461, 2038
BaeI ACNNNNGTAYC 2 cut(s) 1181, 1214
BamHI GGATCC 2 cut(s) 184, 274
BanII GRGCYC 1 cut(s) 91
BauI CACGAG 1 cut(s) 1193
BbsI GAAGAC 2 cut(s) 2216, 2281
Bbv12I GWGCWC 1 cut(s) 91
BbvI GCAGC 3 cut(s) 784, 1906, 2204
BccI CCATC 5 cut(s) 341, 464, 629, 1281, 2264
BclI TGATCA 1 cut(s) 2095
BcoDI GTCTC 5 cut(s) 435, 785, 1174, 1664, 2144
BfaI CTAG 5 cut(s) 12, 330, 378, 740, 1380
BfmI CTRYAG 2 cut(s) 240, 318
BisI GCNGC 3 cut(s) 773, 1920, 2218
BlsI GCNGC 3 cut(s) 774, 1921, 2219
BmcAI AGTACT 1 cut(s) 512
Bme18I GGWCC 3 cut(s) 431, 461, 2038
BmgT120I GGNCC 3 cut(s) 431, 461, 2038
BmiI GGNNCC 5 cut(s) 186, 276, 291, 327, 463
BmsI GCATC 4 cut(s) 247, 388, 541, 2185
BpiI GAAGAC 2 cut(s) 2216, 2281
Bpu10I CCTNAGC 1 cut(s) 1950
BpuEI CTTGAG 1 cut(s) 1608
BsaI GGTCTC 1 cut(s) 2144
BsaWI WCCGGW 2 cut(s) 433, 2035
BsaXI ACNNNNNCTCC 2 cut(s) 1612, 1642
Bsc4I CCNNNNNNNGG 1 cut(s) 470
Bse118I RCCGGY 1 cut(s) 2035
Bse1I ACTGG 2 cut(s) 1237, 1940
Bse3DI GCAATG 1 cut(s) 1836
BseGI GGATG 2 cut(s) 1720, 2200
BseLI CCNNNNNNNGG 1 cut(s) 470
BseMI GCAATG 1 cut(s) 1836
BseMII CTCAG 5 cut(s) 927, 1941, 2001, 2013, 2299
BseNI ACTGG 2 cut(s) 1237, 1940
BseRI GAGGAG 3 cut(s) 338, 481, 2134
BseXI GCAGC 3 cut(s) 784, 1906, 2204
BshFI GGCC 1 cut(s) 30
BshTI ACCGGT 1 cut(s) 2035
BsiHKAI GWGCWC 1 cut(s) 91
BsiSI CCGG 3 cut(s) 27, 434, 2036
BslFI GGGAC 3 cut(s) 425, 447, 666
BslI CCNNNNNNNGG 1 cut(s) 470
BsmAI GTCTC 5 cut(s) 435, 785, 1174, 1664, 2144
BsmFI GGGAC 3 cut(s) 425, 447, 666
BsnI GGCC 1 cut(s) 30
Bso31I GGTCTC 1 cut(s) 2144
Bsp1286I GDGCHC 1 cut(s) 91
Bsp143I GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
BspACI CCGC 1 cut(s) 1709
BspANI GGCC 1 cut(s) 30
BspCNI CTCAG 5 cut(s) 928, 1942, 2002, 2014, 2298
BspHI TCATGA 1 cut(s) 982
BspLI GGNNCC 5 cut(s) 186, 276, 291, 327, 463
BspPI GGATC 8 cut(s) 179, 192, 228, 269, 282, 368, 570, 1931
BspTNI GGTCTC 1 cut(s) 2144
BsrDI GCAATG 1 cut(s) 1836
BsrFI RCCGGY 1 cut(s) 2035
BsrI ACTGG 2 cut(s) 1237, 1940
BssAI RCCGGY 1 cut(s) 2035
BssMI GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
BssSI CACGAG 1 cut(s) 1193
Bst2BI CACGAG 1 cut(s) 1193
Bst4CI ACNGT 4 cut(s) 341, 506, 1584, 1604
Bst6I CTCTTC 6 cut(s) 54, 120, 1245, 1963, 2142, 2196
BstAPI GCANNNNNTGC 2 cut(s) 1264, 1853
BstC8I GCNNGC 3 cut(s) 1130, 1308, 1845
BstDEI CTNAG 7 cut(s) 936, 1004, 1950, 2010, 2022, 2285, 2314
BstF5I GGATG 2 cut(s) 1720, 2200
BstKTI GATC 9 cut(s) 187, 223, 277, 376, 565, 1282, 1657, 1939, 2098
BstMAI GTCTC 5 cut(s) 435, 785, 1174, 1664, 2144
BstMBI GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
BstMWI GCNNNNNNNGC 4 cut(s) 1264, 1360, 1853, 2015
BstNSI RCATGY 3 cut(s) 448, 701, 1847
BstSFI CTRYAG 2 cut(s) 240, 318
BstV1I GCAGC 3 cut(s) 784, 1906, 2204
BstV2I GAAGAC 2 cut(s) 2216, 2281
BstX2I RGATCY 4 cut(s) 184, 220, 274, 562
BstYI RGATCY 4 cut(s) 184, 220, 274, 562
BsuRI GGCC 1 cut(s) 30
BtsCI GGATG 2 cut(s) 1720, 2200
BtsI GCAGTG 1 cut(s) 2004
BtsIMutI CAGTG 4 cut(s) 1609, 1947, 2004, 2019
Cac8I GCNNGC 3 cut(s) 1130, 1308, 1845
CciI TCATGA 1 cut(s) 982
Cfr10I RCCGGY 1 cut(s) 2035
Cfr13I GGNCC 3 cut(s) 431, 461, 2038
CseI GACGC 1 cut(s) 1153
Csp6I GTAC 5 cut(s) 511, 812, 994, 1190, 1870
CspAI ACCGGT 1 cut(s) 2035
CviQI GTAC 5 cut(s) 511, 812, 994, 1190, 1870
DdeI CTNAG 7 cut(s) 936, 1004, 1950, 2010, 2022, 2285, 2314
DpnI GATC 9 cut(s) 186, 222, 276, 375, 564, 1281, 1656, 1938, 2097
DpnII GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
DraI TTTAAA 1 cut(s) 1864
DraIII CACNNNGTG 3 cut(s) 122, 1015, 1400
EaeI YGGCCR 1 cut(s) 28
Eam1104I CTCTTC 6 cut(s) 54, 120, 1245, 1963, 2142, 2196
EarI CTCTTC 6 cut(s) 54, 120, 1245, 1963, 2142, 2196
Ecl136II GAGCTC 1 cut(s) 89
Eco24I GRGCYC 1 cut(s) 91
Eco31I GGTCTC 1 cut(s) 2144
Eco47I GGWCC 3 cut(s) 431, 461, 2038
Eco53kI GAGCTC 1 cut(s) 89
Eco57I CTGAAG 3 cut(s) 2050, 2076, 2220
EcoICRI GAGCTC 1 cut(s) 89
EcoO109I RGGNCCY 1 cut(s) 461
EcoRI GAATTC 1 cut(s) 2070
EcoT22I ATGCAT 1 cut(s) 1849
EcoT38I GRGCYC 1 cut(s) 91
FalI AAGNNNNNCTT 2 cut(s) 1635, 1667
FaqI GGGAC 3 cut(s) 425, 447, 666
FbaI TGATCA 1 cut(s) 2095
Fnu4HI GCNGC 3 cut(s) 773, 1920, 2218
FokI GGATG 2 cut(s) 1727, 2207
FriOI GRGCYC 1 cut(s) 91
Fsp4HI GCNGC 3 cut(s) 773, 1920, 2218
FspBI CTAG 5 cut(s) 12, 330, 378, 740, 1380
GluI GCNGC 3 cut(s) 773, 1920, 2218
HaeIII GGCC 1 cut(s) 30
HapII CCGG 3 cut(s) 27, 434, 2036
HgaI GACGC 1 cut(s) 1153
HincII GTYRAC 4 cut(s) 450, 703, 1575, 2028
HindII GTYRAC 4 cut(s) 450, 703, 1575, 2028
HindIII AAGCTT 1 cut(s) 1361
HpaI GTTAAC 1 cut(s) 450
HpaII CCGG 3 cut(s) 27, 434, 2036
HphI GGTGA 2 cut(s) 362, 433
Hpy166II GTNNAC 7 cut(s) 450, 703, 1192, 1575, 2028, 2086, 2169
Hpy8I GTNNAC 7 cut(s) 450, 703, 1192, 1575, 2028, 2086, 2169
Hpy99I CGWCG 1 cut(s) 822
HpyAV CCTTC 7 cut(s) 737, 802, 949, 963, 1327, 1885, 2074
HpyCH4III ACNGT 4 cut(s) 341, 506, 1584, 1604
HpyCH4IV ACGT 2 cut(s) 730, 1483
HpyF10VI GCNNNNNNNGC 4 cut(s) 1264, 1360, 1853, 2015
HpyF3I CTNAG 7 cut(s) 936, 1004, 1950, 2010, 2022, 2285, 2314
HpySE526I ACGT 2 cut(s) 730, 1483
Ksp22I TGATCA 1 cut(s) 2095
KspAI GTTAAC 1 cut(s) 450
Kzo9I GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
LmnI GCTCC 4 cut(s) 86, 325, 958, 1633
Lsp1109I GCAGC 3 cut(s) 784, 1906, 2204
LweI GCATC 4 cut(s) 247, 388, 541, 2185
MaeI CTAG 5 cut(s) 12, 330, 378, 740, 1380
MaeII ACGT 2 cut(s) 730, 1483
MaeIII GTNAC 3 cut(s) 1007, 1618, 2238
MalI GATC 9 cut(s) 186, 222, 276, 375, 564, 1281, 1656, 1938, 2097
MboI GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
MfeI CAATTG 1 cut(s) 1614
MflI RGATCY 4 cut(s) 184, 220, 274, 562
MhlI GDGCHC 1 cut(s) 91
MlyI GAGTC 5 cut(s) 32, 1417, 1615, 1980, 2033
MmeI TCCRAC 1 cut(s) 1861
Mph1103I ATGCAT 1 cut(s) 1849
MseI TTAA 9 cut(s) 449, 641, 734, 1053, 1154, 1686, 1779, 1863, 2183
MslI CAYNNNNRTG 3 cut(s) 719, 1347, 1992
MspA1I CMGCKG 1 cut(s) 2054
MspI CCGG 3 cut(s) 27, 434, 2036
MunI CAATTG 1 cut(s) 1614
MwoI GCNNNNNNNGC 4 cut(s) 1264, 1360, 1853, 2015
NdeII GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
NlaIV GGNNCC 5 cut(s) 186, 276, 291, 327, 463
NmeAIII GCCGAG 1 cut(s) 1687
NmuCI GTSAC 2 cut(s) 1007, 1618
NsiI ATGCAT 1 cut(s) 1849
NspI RCATGY 3 cut(s) 448, 701, 1847
OliI CACNNNNGTG 1 cut(s) 1347
PaeI GCATGC 1 cut(s) 1847
PagI TCATGA 1 cut(s) 982
PciI ACATGT 1 cut(s) 444
PfeI GAWTC 8 cut(s) 130, 885, 944, 988, 1505, 1676, 2048, 2060
PflFI GACNNNGTC 1 cut(s) 572
PinAI ACCGGT 1 cut(s) 2035
PkrI GCNGC 3 cut(s) 774, 1921, 2219
PleI GAGTC 5 cut(s) 31, 1417, 1615, 1979, 2032
PpsI GAGTC 5 cut(s) 31, 1417, 1615, 1979, 2032
PpuMI RGGWCCY 1 cut(s) 461
PscI ACATGT 1 cut(s) 444
Psp124BI GAGCTC 1 cut(s) 91
Psp5II RGGWCCY 1 cut(s) 461
PspN4I GGNNCC 5 cut(s) 186, 276, 291, 327, 463
PspPI GGNCC 3 cut(s) 431, 461, 2038
PspPPI RGGWCCY 1 cut(s) 461
PsrI GAACNNNNNNTAC 2 cut(s) 2223, 2255
PsuI RGATCY 4 cut(s) 184, 220, 274, 562
PsyI GACNNNGTC 1 cut(s) 572
PvuII CAGCTG 1 cut(s) 2054
RsaI GTAC 5 cut(s) 512, 813, 995, 1191, 1871
RsaNI GTAC 5 cut(s) 511, 812, 994, 1190, 1870
RseI CAYNNNNRTG 3 cut(s) 719, 1347, 1992
SacI GAGCTC 1 cut(s) 91
SaqAI TTAA 9 cut(s) 449, 641, 734, 1053, 1154, 1686, 1779, 1863, 2183
SatI GCNGC 3 cut(s) 773, 1920, 2218
Sau3AI GATC 9 cut(s) 184, 220, 274, 373, 562, 1279, 1654, 1936, 2095
Sau96I GGNCC 3 cut(s) 431, 461, 2038
ScaI AGTACT 1 cut(s) 512
SchI GAGTC 5 cut(s) 32, 1417, 1615, 1980, 2033
SduI GDGCHC 1 cut(s) 91
SfaNI GCATC 4 cut(s) 247, 388, 541, 2185
SfcI CTRYAG 2 cut(s) 240, 318
SinI GGWCC 3 cut(s) 431, 461, 2038
SmiMI CAYNNNNRTG 3 cut(s) 719, 1347, 1992
SmlI CTYRAG 1 cut(s) 1623
SmoI CTYRAG 1 cut(s) 1623
SphI GCATGC 1 cut(s) 1847
SsiI CCGC 1 cut(s) 1709
SspI AATATT 1 cut(s) 842
SspMI CTAG 5 cut(s) 12, 330, 378, 740, 1380
SstI GAGCTC 1 cut(s) 91
TaaI ACNGT 4 cut(s) 341, 506, 1584, 1604
TaiI ACGT 2 cut(s) 733, 1486
TaqI TCGA 3 cut(s) 538, 947, 1107
TatI WGTACW 1 cut(s) 510
TfiI GAWTC 8 cut(s) 130, 885, 944, 988, 1505, 1676, 2048, 2060
Tru1I TTAA 9 cut(s) 449, 641, 734, 1053, 1154, 1686, 1779, 1863, 2183
Tru9I TTAA 9 cut(s) 449, 641, 734, 1053, 1154, 1686, 1779, 1863, 2183
TscAI CASTG 4 cut(s) 1609, 1947, 2011, 2026
TseFI GTSAC 2 cut(s) 1007, 1618
TseI GCWGC 3 cut(s) 772, 1919, 2217
Tsp45I GTSAC 2 cut(s) 1007, 1618
TspGWI ACGGA 2 cut(s) 348, 1964
TspRI CASTG 4 cut(s) 1609, 1947, 2011, 2026
Tth111I GACNNNGTC 1 cut(s) 572
VpaK11BI GGWCC 3 cut(s) 431, 461, 2038
XapI RAATTY 5 cut(s) 98, 154, 497, 907, 2070
XceI RCATGY 3 cut(s) 448, 701, 1847
XspI CTAG 5 cut(s) 12, 330, 378, 740, 1380
ZrmI AGTACT 1 cut(s) 512
Zsp2I ATGCAT 1 cut(s) 1849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.