FvH4_4g01531

Domain of unknown function (DUF4371)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000215
Physical Location & Seq
Forward (+)
1365089 .. 1368250
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g01531.t1

Sequence Viewer

Length: 1962 bp
ATGCCTCTTAAAAGAAAATATGAATCTGGACATGCTAAACGTTTAAAGAAGAAAAAGGGTGATGAGTTAGCTAAGTCTTTAGTGGGAAGCATGGATAGGTACGTTACTAGAAAAGCACAAGGCCTGGGTGAAACATCAGTGAATGATGAGCCTAAAGAGGCTGATGAGAACGTTGATATAGAAGTCAACTTGGAAGAGCACATTGATGGGGAAAATCAAACTGATGCCAATGAAGTTGTAGATGATCATTTGGGTCAAAATGAAAGTGAGGATGATGCTGAAAATAATGATAATGTGAATGCTCCGAATGTGACTCCTGTGAATATTTTTGATCCAAGAAATTGGGATAGCTTGGATAAAAATTTGATAGACTTGTTGGTAGAAAAGGGTCATGTGAGGGATTTGTCAATTGAGCATGGTCCTCCAGACAAGTTTGGTAGACATTTCAGCTCAAAATTTTACACTAGGTTTGTAGGAAATGGAGAGAAGTATGATAGAGAGTGGCTAGTATACTCAAAGGAACTTGACAAGGTTTTCTGTTTTTGTTGCAAGTTGTTCAAAAGAGGGCCAATGCGAGGGCAGCTGCCGAATGATGGTTATAATGATTGGGGTCATCTTGGTAGAAGGCTTAAAGAGCATGAAATGAGCAATGATCATCTCGTCAATGCAAGTTCTTGGACTGATTTGCGTCTTAGATTGCAGAGGCTTGAAACCATTGATAAAGCTTTTCAAGACCAGATTAGGTTAGAGAAAAAACATTGGAGGAATGTGCTAAAAAGAGTTATTGCATTTGTGAAATTTCTTGCTAAACATAACTTAGCATTCCGTGGAACTAATGAGAGGCTGTATCAACCCAATAATGGACTTTTTTTAGGCCTAGTTGAGATGACTACAGACTTTGATGAAGTGATGGAGGAGCATTGTCGGCGCATAAATAGTTCTGAAATTCATCATCACTATCTTGGCCATAACATTCAAAATGAGCTGTTGCATATGATAAGTGTTGAAATCAAAGCTGAGATCATTAAAAAAATTAAAGATGCTCAATACTTCTCTGTGATTCTTGATTGCACACCAGATATTAGTCACCAGGAGCAAATGTCATTGATACTTCGATGTGTGAATGTTTCAACAAGTCCAATACAGGTTGAAGAATTCTTTTTGGAATTTTTAAATGTACATGACACATCTGGTCAAGGACTTTTTGAAGAATTAGTAGCAGTGATACAATCATTAGATCTTGATATTAGCAATGTGAGAGGACAAGGATATGACAATGGGTCAAACATGAAAGGCAAGCATCAAGGAGTACAAAAGAAATTGTTAGATGTCAATCCTAGAGCATTTTACACCCCTTGTGGTTGTCATTGTCTGAACTTAACTCTTTGTGACTTGGCGAAGTCTTGTGAGAAAGCACTGGATTTTTTTGGAGTCTTGCAACGTCTTTATACCTTATTTGCAGGTTCTACAAAGAGATGGCAAATTCTGAATGACAATGTGAAAGGATTCACTCTCAAATCATTATCCACTACACGATGGGAGAGCCGTATTGGGAGTATTAAGCCTCTTCGATTCAATGCTGCTGAAGTAAGAGAAGCATTATTGCAATTGGCAGAAAGTGACAAGGATCCTATAACTAAAAGTGGTGCAAAGTCAATAGCAACTAATGATTTGGGAGACTTTGAGTTTTTGTTAAGCATGGTGATTTGGGCCTTCAAAATCTCTAAGACGGCTCTGCCTGACACCGGCAGTGCATTGTTCGTATCAGATCCTAAGAAATCAGCCAGAGGACATGAGCTTTCCCACACAGCAACAGGAAGATTCATGTTCAGTAAAGGCCGAGGCAAACAGCATGTCTGTAAGAAACACCCATTAGTCAGAAAAACTTTAGGTGGCATTGCAGATGCCAAGGCGCCAACTCCTTCAAGCTTCAGTAATCGGTATATTTCTACAAAGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

654

Amino Acids

74.33

Weight (kDa)

7.35

Isoelectric Point (pI)

29.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 235 - 436 1.6e-20 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35150 AT2G06500 AT2G16040 AT2G19960 AT2G19960 AT3G29638 AT3G29794 AT4G10200 AT4G10200 AT5G35475
fragaria_vesca FvH4_1g08455 FvH4_1g08761 FvH4_1g10851 FvH4_1g17271 FvH4_1g26762 FvH4_2g15031 FvH4_2g18762 FvH4_2g29241 FvH4_2g32571 FvH4_4g01531 FvH4_4g12942 FvH4_4g14421 FvH4_4g14431 FvH4_4g14434 FvH4_5g30891 FvH4_6g47641 FvH4_6g47642
malus_domestica MD01G1087700.v1.1 MD11G1104400.v1.1
pyrus_communis pycom05g13550 pycom11g18320
rosa_chinensis RchiOBHm_Chr1g0320361 RchiOBHm_Chr1g0321011 RchiOBHm_Chr1g0321921 RchiOBHm_Chr1g0377611 RchiOBHm_Chr1g0379061 RchiOBHm_Chr2g0106921 RchiOBHm_Chr2g0137341 RchiOBHm_Chr2g0139641 RchiOBHm_Chr2g0139651 RchiOBHm_Chr2g0144921 RchiOBHm_Chr2g0161851 RchiOBHm_Chr2g0172511 RchiOBHm_Chr3g0449931 RchiOBHm_Chr3g0452101 RchiOBHm_Chr3g0480551 RchiOBHm_Chr4g0427821 RchiOBHm_Chr4g0431861 RchiOBHm_Chr4g0435271 RchiOBHm_Chr5g0015121 RchiOBHm_Chr5g0031951 RchiOBHm_Chr5g0034331 RchiOBHm_Chr5g0059431 RchiOBHm_Chr6g0288531 RchiOBHm_Chr6g0308901 RchiOBHm_Chr7g0198801 RchiOBHm_Chr7g0198811 RchiOBHm_Chr7g0200001 RchiOBHm_Chr7g0205811 RchiOBHm_Chr7g0230921 RchiOBHm_Chr7g0233981
rosa_multiflora Rmu_sc0000475.1_g000004 Rmu_sc0000483.1_g000021 Rmu_sc0000551.1_g000007 Rmu_sc0000761.1_g000023 Rmu_sc0000898.1_g000072 Rmu_sc0001921.1_g000031 Rmu_sc0002804.1_g000009 Rmu_sc0002880.1_g000005 Rmu_sc0003207.1_g000046 Rmu_sc0003914.1_g000010 Rmu_sc0004165.1_g000089 Rmu_sc0004209.1_g000001 Rmu_sc0004402.1_g000017 Rmu_sc0004443.1_g000001 Rmu_sc0005506.1_g000007 Rmu_sc0005506.1_g000009 Rmu_sc0006443.1_g000001 Rmu_sc0008191.1_g000019 Rmu_sc0008328.1_g000004 Rmu_sc0009489.1_g000004 Rmu_sc0010368.1_g000012 Rmu_sc0010368.1_g000014 Rmu_sc0011232.1_g000005 Rmu_sc0011630.1_g000006 Rmu_sc0014780.1_g000001 Rmu_sc0028257.1_g000002 Rmu_sc0029902.1_g000001 Rmu_ssc0000386.1_g000041 Rmu_ssc0000434.1_g000020
rosa_roxburghii Rroxscaffold_2G00084750 Rroxscaffold_2G00090380 Rroxscaffold_2G00108310 Rroxscaffold_3G00235050 Rroxscaffold_3G00252220 Rroxscaffold_4G00323580 Rroxscaffold_5G00337920 Rroxscaffold_5G00370050 Rroxscaffold_7G00169180 Rroxscaffold_7G00200470
rosa_rugosa Rorug01G0156600.1 Rorug02G0305900 Rorug02G0362300 Rorug03G0111800 Rorug03G0273500 Rorug03G0340700 Rorug04G0196000 Rorug05G0251300 Rorug05G0465700 Rorug06G0031300 Rorug06G0170700 Rorug07G0226000 Rorug07G0263200
rosa_samantha Rh1CG203400 Rh1CG203500 Rh3AG212700 Rh3BG246300 Rh4BG318100 Rh6BG118800 Rh6DG105400 Rh7DG231500
rosa_wichuraiana Rw1G002740 Rw1G016740 Rw2G009190 Rw2G021330 Rw2G030170 Rw2G034650 Rw2G034990 Rw2G046190 Rw3G019490 Rw3G019500 Rw3G019510 Rw3G019990 Rw3G020480 Rw3G026090 Rw4G005490 Rw4G007090 Rw4G022920 Rw4G030140 Rw5G011030 Rw5G019330 Rw5G027260 Rw5G029990 Rw5G034080 Rw6G025080 Rw6G031390 Rw6G038690 Rw7G016630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
Acc36I ACCTGC 1 cut(s) 1451
AccB1I GGYRCC 1 cut(s) 1912
AccI GTMKAC 2 cut(s) 439, 510
AclI AACGTT 2 cut(s) 40, 171
AclWI GGATC 4 cut(s) 326, 1622, 1635, 1763
AcoI YGGCCR 1 cut(s) 964
AcsI RAATTY 7 cut(s) 361, 455, 797, 945, 1154, 1166, 1482
AcuI CTGAAG 2 cut(s) 1605, 1915
AcyI GRCGYC 1 cut(s) 1913
AfaI GTAC 3 cut(s) 101, 1179, 1311
AfiI CCNNNNNNNGG 4 cut(s) 575, 593, 860, 1745
AhdI GACNNNNNGTC 1 cut(s) 1279
AjnI CCWGG 2 cut(s) 123, 1089
AluBI AGCT 9 cut(s) 71, 351, 450, 583, 725, 985, 1016, 1798, 1929
AluI AGCT 9 cut(s) 71, 351, 450, 583, 725, 985, 1016, 1798, 1929
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 1 cut(s) 1671
AlwI GGATC 4 cut(s) 326, 1622, 1635, 1763
AoxI GGCC 6 cut(s) 121, 566, 874, 964, 1710, 1837
ApeKI GCWGC 3 cut(s) 580, 583, 1580
ApoI RAATTY 7 cut(s) 361, 455, 797, 945, 1154, 1166, 1482
ArsI GACNNNNNNTTYG 2 cut(s) 1839, 1871
Asp700I GAANNNNTTC 1 cut(s) 1505
AspLEI GCGC 2 cut(s) 930, 1915
AspS9I GGNCC 3 cut(s) 419, 566, 1710
AsuHPI GGTGA 4 cut(s) 71, 140, 1079, 1714
AvaII GGWCC 1 cut(s) 419
BalI TGGCCA 1 cut(s) 966
BamHI GGATCC 1 cut(s) 1627
BanI GGYRCC 1 cut(s) 1912
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 3 cut(s) 570, 592, 1567
BccI CCATC 5 cut(s) 200, 587, 904, 1470, 1530
BceAI ACGGC 2 cut(s) 1530, 1746
BciT130I CCWGG 2 cut(s) 125, 1091
BclI TGATCA 2 cut(s) 244, 652
BcoDI GTCTC 1 cut(s) 1671
BfaI CTAG 5 cut(s) 108, 465, 506, 878, 1338
BfmI CTRYAG 1 cut(s) 891
BfoI RGCGCY 1 cut(s) 1916
BfuAI ACCTGC 1 cut(s) 1451
BglII AGATCT 1 cut(s) 1237
BisI GCNGC 3 cut(s) 581, 584, 1581
BlsI GCNGC 3 cut(s) 582, 585, 1582
Bme1390I CCNGG 2 cut(s) 125, 1091
Bme18I GGWCC 1 cut(s) 419
BmeRI GACNNNNNGTC 1 cut(s) 1279
BmgT120I GGNCC 3 cut(s) 419, 566, 1710
BmiI GGNNCC 2 cut(s) 1629, 1914
BmrFI CCNGG 2 cut(s) 125, 1091
BmsI GCATC 5 cut(s) 214, 265, 1030, 1309, 1894
BpmI CTGGAG 1 cut(s) 408
BsaBI GATNNNNATC 1 cut(s) 1332
BsaHI GRCGYC 1 cut(s) 1913
BsaJI CCNNGG 4 cut(s) 124, 826, 1840, 1908
BsaXI ACNNNNNCTCC 2 cut(s) 1085, 1115
Bsc4I CCNNNNNNNGG 4 cut(s) 575, 593, 860, 1745
Bse118I RCCGGY 1 cut(s) 1745
Bse1I ACTGG 1 cut(s) 1422
Bse3DI GCAATG 3 cut(s) 655, 1258, 1896
Bse8I GATNNNNATC 1 cut(s) 1332
BseBI CCWGG 2 cut(s) 125, 1091
BseDI CCNNGG 4 cut(s) 124, 826, 1840, 1908
BseGI GGATG 1 cut(s) 277
BseJI GATNNNNATC 1 cut(s) 1332
BseLI CCNNNNNNNGG 4 cut(s) 575, 593, 860, 1745
BseMI GCAATG 3 cut(s) 655, 1258, 1896
BseMII CTCAG 1 cut(s) 1008
BseNI ACTGG 1 cut(s) 1422
BseRI GAGGAG 1 cut(s) 929
BseXI GCAGC 3 cut(s) 570, 592, 1567
BshFI GGCC 6 cut(s) 123, 568, 876, 966, 1712, 1839
BshNI GGYRCC 1 cut(s) 1912
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 1 cut(s) 1746
BslI CCNNNNNNNGG 4 cut(s) 575, 593, 860, 1745
BsmAI GTCTC 1 cut(s) 1671
BsmI GAATGC 2 cut(s) 304, 821
BsnI GGCC 6 cut(s) 123, 568, 876, 966, 1712, 1839
Bsp1286I GDGCHC 1 cut(s) 201
Bsp1407I TGTACA 1 cut(s) 1177
Bsp143I GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
BspANI GGCC 6 cut(s) 123, 568, 876, 966, 1712, 1839
BspCNI CTCAG 1 cut(s) 1009
BspLI GGNNCC 2 cut(s) 1629, 1914
BspMI ACCTGC 1 cut(s) 1451
BspPI GGATC 4 cut(s) 326, 1622, 1635, 1763
BspQI GCTCTTC 1 cut(s) 189
BspT107I GGYRCC 1 cut(s) 1912
BsrDI GCAATG 3 cut(s) 655, 1258, 1896
BsrFI RCCGGY 1 cut(s) 1745
BsrGI TGTACA 1 cut(s) 1177
BsrI ACTGG 1 cut(s) 1422
BssAI RCCGGY 1 cut(s) 1745
BssECI CCNNGG 4 cut(s) 124, 826, 1840, 1908
BssMI GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
BssNAI GTATAC 1 cut(s) 511
BssNI GRCGYC 1 cut(s) 1913
BssT1I CCWWGG 1 cut(s) 1908
Bst1107I GTATAC 1 cut(s) 511
Bst2UI CCWGG 2 cut(s) 125, 1091
Bst6I CTCTTC 2 cut(s) 189, 1572
BstACI GRCGYC 1 cut(s) 1913
BstAUI TGTACA 1 cut(s) 1177
BstC8I GCNNGC 1 cut(s) 1298
BstDEI CTNAG 6 cut(s) 72, 692, 817, 1017, 1725, 1773
BstDSI CCRYGG 1 cut(s) 826
BstF5I GGATG 1 cut(s) 277
BstH2I RGCGCY 1 cut(s) 1916
BstHHI GCGC 2 cut(s) 930, 1915
BstKTI GATC 7 cut(s) 247, 334, 655, 1023, 1240, 1630, 1771
BstMAI GTCTC 1 cut(s) 1671
BstMBI GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
BstMWI GCNNNNNNNGC 3 cut(s) 580, 634, 925
BstNI CCWGG 2 cut(s) 125, 1091
BstNSI RCATGY 2 cut(s) 35, 1856
BstSCI CCNGG 2 cut(s) 123, 1089
BstSFI CTRYAG 1 cut(s) 891
BstV1I GCAGC 3 cut(s) 570, 592, 1567
BstX2I RGATCY 3 cut(s) 1237, 1627, 1768
BstXI CCANNNNNNTGG 1 cut(s) 342
BstYI RGATCY 3 cut(s) 1237, 1627, 1768
BstZ17I GTATAC 1 cut(s) 511
BsuRI GGCC 6 cut(s) 123, 568, 876, 966, 1712, 1839
BtgI CCRYGG 1 cut(s) 826
BtsCI GGATG 1 cut(s) 277
BtsI GCAGTG 2 cut(s) 1227, 1756
BtsIMutI CAGTG 4 cut(s) 144, 1227, 1415, 1756
BveI ACCTGC 1 cut(s) 1451
Cac8I GCNNGC 1 cut(s) 1298
CfoI GCGC 2 cut(s) 930, 1915
Cfr10I RCCGGY 1 cut(s) 1745
Cfr13I GGNCC 3 cut(s) 419, 566, 1710
CseI GACGC 1 cut(s) 677
Csp6I GTAC 3 cut(s) 100, 1178, 1310
CviQI GTAC 3 cut(s) 100, 1178, 1310
DdeI CTNAG 6 cut(s) 72, 692, 817, 1017, 1725, 1773
DinI GGCGCC 1 cut(s) 1914
DpnI GATC 7 cut(s) 246, 333, 654, 1022, 1239, 1629, 1770
DpnII GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
DraI TTTAAA 2 cut(s) 45, 1173
DriI GACNNNNNGTC 1 cut(s) 1279
EaeI YGGCCR 1 cut(s) 964
Eam1104I CTCTTC 2 cut(s) 189, 1572
Eam1105I GACNNNNNGTC 1 cut(s) 1279
EarI CTCTTC 2 cut(s) 189, 1572
Eco130I CCWWGG 1 cut(s) 1908
Eco147I AGGCCT 2 cut(s) 123, 876
Eco47I GGWCC 1 cut(s) 419
Eco57I CTGAAG 2 cut(s) 1605, 1915
EcoRI GAATTC 1 cut(s) 1154
EcoRII CCWGG 2 cut(s) 123, 1089
EcoT14I CCWWGG 1 cut(s) 1908
EgeI GGCGCC 1 cut(s) 1914
EheI GGCGCC 1 cut(s) 1914
ErhI CCWWGG 1 cut(s) 1908
FauNDI CATATG 1 cut(s) 993
FbaI TGATCA 2 cut(s) 244, 652
FblI GTMKAC 2 cut(s) 439, 510
Fnu4HI GCNGC 3 cut(s) 581, 584, 1581
FokI GGATG 1 cut(s) 284
Fsp4HI GCNGC 3 cut(s) 581, 584, 1581
FspBI CTAG 5 cut(s) 108, 465, 506, 878, 1338
GlaI GCGC 2 cut(s) 929, 1914
GluI GCNGC 3 cut(s) 581, 584, 1581
GsuI CTGGAG 1 cut(s) 408
HaeII RGCGCY 1 cut(s) 1916
HaeIII GGCC 6 cut(s) 123, 568, 876, 966, 1712, 1839
HapII CCGG 1 cut(s) 1746
HgaI GACGC 1 cut(s) 677
HhaI GCGC 2 cut(s) 930, 1915
Hin1I GRCGYC 1 cut(s) 1913
Hin6I GCGC 2 cut(s) 928, 1913
HinP1I GCGC 2 cut(s) 928, 1913
HincII GTYRAC 1 cut(s) 187
HindII GTYRAC 1 cut(s) 187
HindIII AAGCTT 2 cut(s) 723, 1927
HinfI GANTC 7 cut(s) 23, 313, 1060, 1431, 1506, 1572, 1821
HpaII CCGG 1 cut(s) 1746
HphI GGTGA 4 cut(s) 71, 140, 1079, 1714
Hpy166II GTNNAC 3 cut(s) 187, 440, 511
Hpy188I TCNGA 6 cut(s) 306, 943, 1374, 1488, 1768, 1880
Hpy188III TCNNGA 5 cut(s) 27, 425, 731, 1064, 1241
Hpy8I GTNNAC 3 cut(s) 187, 440, 511
HpyAV CCTTC 3 cut(s) 618, 1723, 1932
HpyCH4IV ACGT 4 cut(s) 40, 102, 171, 1441
HpyF10VI GCNNNNNNNGC 3 cut(s) 580, 634, 925
HpyF3I CTNAG 6 cut(s) 72, 692, 817, 1017, 1725, 1773
HpySE526I ACGT 4 cut(s) 40, 102, 171, 1441
Hsp92I GRCGYC 1 cut(s) 1913
HspAI GCGC 2 cut(s) 928, 1913
KasI GGCGCC 1 cut(s) 1912
Ksp22I TGATCA 2 cut(s) 244, 652
Kzo9I GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
LguI GCTCTTC 1 cut(s) 189
LmnI GCTCC 3 cut(s) 307, 916, 1093
Lsp1109I GCAGC 3 cut(s) 570, 592, 1567
LweI GCATC 5 cut(s) 214, 265, 1030, 1309, 1894
MaeI CTAG 5 cut(s) 108, 465, 506, 878, 1338
MaeII ACGT 4 cut(s) 40, 102, 171, 1441
MaeIII GTNAC 5 cut(s) 103, 310, 1085, 1388, 1619
MalI GATC 7 cut(s) 246, 333, 654, 1022, 1239, 1629, 1770
MboI GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
MboII GAAGA 6 cut(s) 61, 206, 1163, 1220, 1559, 1830
MfeI CAATTG 2 cut(s) 408, 1607
MflI RGATCY 3 cut(s) 1237, 1627, 1768
MhlI GDGCHC 1 cut(s) 201
MlsI TGGCCA 1 cut(s) 966
MluNI TGGCCA 1 cut(s) 966
Mly113I GGCGCC 1 cut(s) 1913
MlyI GAGTC 2 cut(s) 307, 1440
Mox20I TGGCCA 1 cut(s) 966
MroXI GAANNNNTTC 1 cut(s) 1505
MscI TGGCCA 1 cut(s) 966
MseI TTAA 9 cut(s) 9, 44, 630, 1026, 1035, 1172, 1379, 1560, 1694
MslI CAYNNNNRTG 1 cut(s) 204
Msp20I TGGCCA 1 cut(s) 966
MspA1I CMGCKG 1 cut(s) 583
MspI CCGG 1 cut(s) 1746
MspR9I CCNGG 2 cut(s) 125, 1091
MunI CAATTG 2 cut(s) 408, 1607
Mva1269I GAATGC 2 cut(s) 304, 821
MvaI CCWGG 2 cut(s) 125, 1091
MwoI GCNNNNNNNGC 3 cut(s) 580, 634, 925
NarI GGCGCC 1 cut(s) 1913
NdeI CATATG 1 cut(s) 993
NdeII GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
NlaIV GGNNCC 2 cut(s) 1629, 1914
NmeAIII GCCGAG 1 cut(s) 1865
NmuCI GTSAC 4 cut(s) 310, 1085, 1388, 1619
NspI RCATGY 2 cut(s) 35, 1856
PceI AGGCCT 2 cut(s) 123, 876
PciSI GCTCTTC 1 cut(s) 189
PctI GAATGC 2 cut(s) 304, 821
PdmI GAANNNNTTC 1 cut(s) 1505
PfeI GAWTC 5 cut(s) 23, 1060, 1506, 1572, 1821
PkrI GCNGC 3 cut(s) 582, 585, 1582
PleI GAGTC 2 cut(s) 307, 1439
PluTI GGCGCC 1 cut(s) 1916
PpsI GAGTC 2 cut(s) 307, 1439
PsiI TTATAA 1 cut(s) 600
Psp1406I AACGTT 2 cut(s) 40, 171
Psp6I CCWGG 2 cut(s) 123, 1089
PspGI CCWGG 2 cut(s) 123, 1089
PspN4I GGNNCC 2 cut(s) 1629, 1914
PspPI GGNCC 3 cut(s) 419, 566, 1710
PsuI RGATCY 3 cut(s) 1237, 1627, 1768
PvuII CAGCTG 1 cut(s) 583
RsaI GTAC 3 cut(s) 101, 1179, 1311
RsaNI GTAC 3 cut(s) 100, 1178, 1310
RseI CAYNNNNRTG 1 cut(s) 204
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 9 cut(s) 9, 44, 630, 1026, 1035, 1172, 1379, 1560, 1694
SatI GCNGC 3 cut(s) 581, 584, 1581
Sau3AI GATC 7 cut(s) 244, 331, 652, 1020, 1237, 1627, 1768
Sau96I GGNCC 3 cut(s) 419, 566, 1710
SchI GAGTC 2 cut(s) 307, 1440
ScrFI CCNGG 2 cut(s) 125, 1091
SduI GDGCHC 1 cut(s) 201
SfaNI GCATC 5 cut(s) 214, 265, 1030, 1309, 1894
SfcI CTRYAG 1 cut(s) 891
SfoI GGCGCC 1 cut(s) 1914
SinI GGWCC 1 cut(s) 419
SmiMI CAYNNNNRTG 1 cut(s) 204
SseBI AGGCCT 2 cut(s) 123, 876
SspDI GGCGCC 1 cut(s) 1912
SspI AATATT 1 cut(s) 325
SspMI CTAG 5 cut(s) 108, 465, 506, 878, 1338
StuI AGGCCT 2 cut(s) 123, 876
StyD4I CCNGG 2 cut(s) 123, 1089
StyI CCWWGG 1 cut(s) 1908
TaiI ACGT 4 cut(s) 43, 105, 174, 1444
TaqI TCGA 2 cut(s) 1114, 1570
TatI WGTACW 2 cut(s) 1177, 1309
TfiI GAWTC 5 cut(s) 23, 1060, 1506, 1572, 1821
Tru1I TTAA 9 cut(s) 9, 44, 630, 1026, 1035, 1172, 1379, 1560, 1694
Tru9I TTAA 9 cut(s) 9, 44, 630, 1026, 1035, 1172, 1379, 1560, 1694
TscAI CASTG 4 cut(s) 144, 1227, 1422, 1756
TseFI GTSAC 4 cut(s) 310, 1085, 1388, 1619
TseI GCWGC 3 cut(s) 580, 583, 1580
Tsp45I GTSAC 4 cut(s) 310, 1085, 1388, 1619
TspDTI ATGAA 8 cut(s) 36, 246, 276, 654, 918, 938, 1304, 1813
TspGWI ACGGA 1 cut(s) 815
TspRI CASTG 4 cut(s) 144, 1227, 1422, 1756
VpaK11BI GGWCC 1 cut(s) 419
XapI RAATTY 7 cut(s) 361, 455, 797, 945, 1154, 1166, 1482
XceI RCATGY 2 cut(s) 35, 1856
XmiI GTMKAC 2 cut(s) 439, 510
XmnI GAANNNNTTC 1 cut(s) 1505
XspI CTAG 5 cut(s) 108, 465, 506, 878, 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.