Rw3G019500

Domain of unknown function (DUF4371)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
22241902 .. 22244424
2523 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G019500.1

Sequence Viewer

Length: 2334 bp
ATGCCTCCTAAAAGAAAATATTTATCCGGATATGCAAAACGCTTAAAGAAGAAAAAAGATGTAGAGTTGGTTAACTCTTTAAGGGGAAGTCTTGATAGGTTCATTACTAGGGAACCAGAAGGTTTGGGTGGACATTTAGTTAATGAAGATGCAGAAGAGCACACTGATGGGGAAGATAATGTGGAAGAGCATATTGATAGGGAAGATAATGTGGAAGAGCCCACTGATGGTAATGTAGTTGCTGATAATTTGGGTCATGATGAAAATGAAAATGGTACAGGACATAATGATAATGTGAATGATGCTTCTGTGAATATTTTTGACCCAAGAAATTGGGATAGTTTGGATAAAAAGTTGATAGATTTGTTGGTAGAGAAGGGTCCTCTTAGAGATCTTTCAATAGAAAATGGTCCTCCAGACAAGTTCAATAGACGTTTCAGTTCAAAATTCTACACTCGGTTTTTAGGAAATGGAGAGAAATATGATAGAGAGTGTAAAAGACTTAAGGAGCATGAAATGAGCACTGATCATCTCATTAATGCAAATACTTGGACTGATTTGCGTCTTAGATTGCAGAGGCATGAAACCATTGATAAAGCTTTTCAAGACCAGATTAGGAAAGAGAAAGAACACTGGAGGAATGTGCTGAAAAGAATAATTGCAATTGTCAAATTTCTTGCTAAAAATAACTTAGCTTTCCGTGGAACTAATGAGAGGCTTTATGAACCTAATAATGGACACTTTTTGGGTCTAGTTGAAATGGTGGCAGAATGTGAAGAAGTGATGGAGGAGCATTGTAGACGCATAAATAGTTCTGAAATTCATCATCACTATCTTGGTCATAACATTCAGAATGAGTTGCTGCATATGATAGCTATTGAAATCAAAGCTGAAATCATAAAAAAAATTAAAGATGCTGAATATTTCTCTGTTATTCTTGATTGCACACCAGATATTAGTCACCAAGAGCAGATGTCATTGATACTTAGATGTGTGAATGCTTCAAAGAGTCCAATACAAATTGAAGAGTTCTTTGTGGAGTTTTTAAATGTACATGACACTTCTGGTCAGGGACTATTTGAAGAGCTGCAGGCTGTGGTACAATCATTGGATCTTGATATTAACAATGTGAGGGGACAAGGATATGACAACGGGTCAAATATGAAAGGCAAACACCAAGGGGTGCAAAAAAAATTGTTAGATATCAATCCTAGGGCATTATACACTCCGTGTGGTTGTCATTGTTTAAACTTAACTCTTTGTGATGTGGCAAATTCTTGTGGGAAAGCAGTGGATTTTTTTGGAATATTACAACGTCTTTATACCTTGTTTGCAGGTTCTACAAAGCGATGGCAGGTTTTGAAGGACAACCTAAAAGGATTCACTCTCAAATCATTATCCACTACGCGTTGGGAGAGTCGTATTGAAAGTGTTAAGCCTCTACGATTCAACGCCGTTGAAATAAGAGAAGCATTACTTCAATTGGCAGAAATTGACAAGGATCCCAAAATTAAAAGTGGTGCAAAGTCAATAGCAACTAATGATCTGGGAGACTTTGAGTTTTTGCTAAGCATGGTGATTTGGTATGAAATTTTGTTTGCTTTTAATAAGGTTAGCAAAGTGCTGCAGTCTCATGATATGCAAATTAGTGTTGCTATAGCTGAAGTAAAAGGTCTAATTGCTTGGCTTGATAAGTTTAGAGAAAATGGCTTCACAGATGCAATAATTACTGCTAAAGAAATTGCTGTTGCATTAGATGTTGATCCTGTTTTTCCTGAAAAGCGTCAAATTCAAAGAAAAAGATTTTTTGATGAAAGCGGCACTAAGGGGTCATTAAATAGAAGGTTTGAACAATACCAACGTTATGATGATATCTTTGGATTTTTATTCACTTCTGAAACTTTGAATTCCTTGAATGATAATGATTTGAAAGCTGCTTGTATTCATCTTGAGACTGTTTTGAGATATGGAGAGAGTTCAGATGTTGATGGGGAAGACATGTTTAGAGAGCTAAAACTCTTAAGGGAGATATTACCCAAACAGAAGATGACAGCTAGTGATATATTGAATTTCTTACTGGAAAGGAATAGCTGCCCAGTTGTTAGACTTGCATATCGAATATTGTTAACTGTGCCTGTTACTGTTGCTTCAGCTGAGAGGAGTTTTTCCAAGTTAAAGTTATTGAAGTCTTATTTGCGATCAACTATGTCACAAGAAAGGCTAAATGGACTTGCTTTGATTTCGATTGAGAATGAATATCTTGGAAAAATCAATTGTGATAAGCTAATTGATCAGTTTGCAGGGAAGAAGGCAAGGAGATGGATTTTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

777

Amino Acids

89.35

Weight (kDa)

6.18

Isoelectric Point (pI)

43.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 191 - 394 7.5e-21 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 679 - 752 3.5e-14 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35150 AT2G06500 AT2G16040 AT2G19960 AT2G19960 AT3G29638 AT3G29794 AT4G10200 AT4G10200 AT5G35475
fragaria_vesca FvH4_1g08455 FvH4_1g08761 FvH4_1g10851 FvH4_1g17271 FvH4_1g26762 FvH4_2g15031 FvH4_2g18762 FvH4_2g29241 FvH4_2g32571 FvH4_4g01531 FvH4_4g12942 FvH4_4g14421 FvH4_4g14431 FvH4_4g14434 FvH4_5g30891 FvH4_6g47641 FvH4_6g47642
malus_domestica MD01G1087700.v1.1 MD11G1104400.v1.1
pyrus_communis pycom05g13550 pycom11g18320
rosa_chinensis RchiOBHm_Chr1g0320361 RchiOBHm_Chr1g0321011 RchiOBHm_Chr1g0321921 RchiOBHm_Chr1g0377611 RchiOBHm_Chr1g0379061 RchiOBHm_Chr2g0106921 RchiOBHm_Chr2g0137341 RchiOBHm_Chr2g0139641 RchiOBHm_Chr2g0139651 RchiOBHm_Chr2g0144921 RchiOBHm_Chr2g0161851 RchiOBHm_Chr2g0172511 RchiOBHm_Chr3g0449931 RchiOBHm_Chr3g0452101 RchiOBHm_Chr3g0480551 RchiOBHm_Chr4g0427821 RchiOBHm_Chr4g0431861 RchiOBHm_Chr4g0435271 RchiOBHm_Chr5g0015121 RchiOBHm_Chr5g0031951 RchiOBHm_Chr5g0034331 RchiOBHm_Chr5g0059431 RchiOBHm_Chr6g0288531 RchiOBHm_Chr6g0308901 RchiOBHm_Chr7g0198801 RchiOBHm_Chr7g0198811 RchiOBHm_Chr7g0200001 RchiOBHm_Chr7g0205811 RchiOBHm_Chr7g0230921 RchiOBHm_Chr7g0233981
rosa_multiflora Rmu_sc0000475.1_g000004 Rmu_sc0000483.1_g000021 Rmu_sc0000551.1_g000007 Rmu_sc0000761.1_g000023 Rmu_sc0000898.1_g000072 Rmu_sc0001921.1_g000031 Rmu_sc0002804.1_g000009 Rmu_sc0002880.1_g000005 Rmu_sc0003207.1_g000046 Rmu_sc0003914.1_g000010 Rmu_sc0004165.1_g000089 Rmu_sc0004209.1_g000001 Rmu_sc0004402.1_g000017 Rmu_sc0004443.1_g000001 Rmu_sc0005506.1_g000007 Rmu_sc0005506.1_g000009 Rmu_sc0006443.1_g000001 Rmu_sc0008191.1_g000019 Rmu_sc0008328.1_g000004 Rmu_sc0009489.1_g000004 Rmu_sc0010368.1_g000012 Rmu_sc0010368.1_g000014 Rmu_sc0011232.1_g000005 Rmu_sc0011630.1_g000006 Rmu_sc0014780.1_g000001 Rmu_sc0028257.1_g000002 Rmu_sc0029902.1_g000001 Rmu_ssc0000386.1_g000041 Rmu_ssc0000434.1_g000020
rosa_roxburghii Rroxscaffold_2G00084750 Rroxscaffold_2G00090380 Rroxscaffold_2G00108310 Rroxscaffold_3G00235050 Rroxscaffold_3G00252220 Rroxscaffold_4G00323580 Rroxscaffold_5G00337920 Rroxscaffold_5G00370050 Rroxscaffold_7G00169180 Rroxscaffold_7G00200470
rosa_rugosa Rorug01G0156600.1 Rorug02G0305900 Rorug02G0362300 Rorug03G0111800 Rorug03G0273500 Rorug03G0340700 Rorug04G0196000 Rorug05G0251300 Rorug05G0465700 Rorug06G0031300 Rorug06G0170700 Rorug07G0226000 Rorug07G0263200
rosa_samantha Rh1CG203400 Rh1CG203500 Rh3AG212700 Rh3BG246300 Rh4BG318100 Rh6BG118800 Rh6DG105400 Rh7DG231500
rosa_wichuraiana Rw1G002740 Rw1G016740 Rw2G009190 Rw2G021330 Rw2G030170 Rw2G034650 Rw2G034990 Rw2G046190 Rw3G019490 Rw3G019500 Rw3G019510 Rw3G019990 Rw3G020480 Rw3G026090 Rw4G005490 Rw4G007090 Rw4G022920 Rw4G030140 Rw5G011030 Rw5G019330 Rw5G027260 Rw5G029990 Rw5G034080 Rw6G025080 Rw6G031390 Rw6G038690 Rw7G016630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1325, 1345
AccI GTMKAC 1 cut(s) 799
AccII CGCG 1 cut(s) 1408
AccIII TCCGGA 1 cut(s) 26
AciI CCGC 1 cut(s) 1818
AclI AACGTT 1 cut(s) 1861
AclWI GGATC 4 cut(s) 1119, 1496, 1509, 1757
AcsI RAATTY 8 cut(s) 446, 671, 819, 1273, 1590, 1788, 1906, 2068
AcuI CTGAAG 2 cut(s) 1683, 2133
AdeI CACNNNGTG 1 cut(s) 1230
AfaI GTAC 3 cut(s) 277, 1053, 1101
AfiI CCNNNNNNNGG 2 cut(s) 227, 734
AflII CTTAAG 2 cut(s) 503, 2020
AflIII ACRYGT 2 cut(s) 1406, 1998
AhdI GACNNNNNGTC 1 cut(s) 1153
Alw21I GWGCWC 2 cut(s) 162, 524
Alw26I GTCTC 3 cut(s) 1545, 1635, 1946
AlwI GGATC 4 cut(s) 1119, 1496, 1509, 1757
Aor13HI TCCGGA 1 cut(s) 26
ApeKI GCWGC 5 cut(s) 862, 1087, 1624, 1934, 2091
ApoI RAATTY 8 cut(s) 446, 671, 819, 1273, 1590, 1788, 1906, 2068
AseI ATTAAT 1 cut(s) 537
AspA2I CCTAGG 1 cut(s) 1211
AspS9I GGNCC 2 cut(s) 380, 410
AsuHPI GGTGA 2 cut(s) 953, 1588
AvaII GGWCC 2 cut(s) 380, 410
AvrII CCTAGG 1 cut(s) 1211
BamHI GGATCC 1 cut(s) 1501
BanII GRGCYC 1 cut(s) 222
BbsI GAAGAC 1 cut(s) 2001
Bbv12I GWGCWC 2 cut(s) 162, 524
BbvI GCAGC 5 cut(s) 849, 1074, 1611, 1921, 2078
BccI CCATC 6 cut(s) 161, 221, 778, 1344, 1982, 2313
BceAI ACGGC 1 cut(s) 1439
BclI TGATCA 2 cut(s) 526, 2290
BcoDI GTCTC 3 cut(s) 1545, 1635, 1946
BfaI CTAG 4 cut(s) 108, 752, 1212, 2055
BfmI CTRYAG 3 cut(s) 1088, 1625, 1656
BfrI CTTAAG 2 cut(s) 503, 2020
BfuAI ACCTGC 2 cut(s) 1325, 1345
BglII AGATCT 1 cut(s) 391
BisI GCNGC 6 cut(s) 863, 1088, 1625, 1819, 1935, 2092
BlnI CCTAGG 1 cut(s) 1211
BlpI GCTNAGC 1 cut(s) 1568
BlsI GCNGC 6 cut(s) 864, 1089, 1626, 1820, 1936, 2093
Bme18I GGWCC 2 cut(s) 380, 410
BmeRI GACNNNNNGTC 1 cut(s) 1153
BmgT120I GGNCC 2 cut(s) 380, 410
BmiI GGNNCC 3 cut(s) 114, 381, 1503
BmrI ACTGGG 1 cut(s) 2090
BmsI GCATC 4 cut(s) 139, 292, 904, 1708
BmuI ACTGGG 1 cut(s) 2090
BpiI GAAGAC 1 cut(s) 2001
BpmI CTGGAG 2 cut(s) 399, 655
Bpu1102I GCTNAGC 1 cut(s) 1568
BpuEI CTTGAG 1 cut(s) 1970
BsaBI GATNNNNATC 2 cut(s) 1206, 1761
BsaJI CCNNGG 3 cut(s) 700, 1177, 1211
BsaWI WCCGGW 1 cut(s) 26
Bsc4I CCNNNNNNNGG 2 cut(s) 227, 734
Bse1I ACTGG 3 cut(s) 638, 2082, 2096
Bse8I GATNNNNATC 2 cut(s) 1206, 1761
BseAI TCCGGA 1 cut(s) 26
BseDI CCNNGG 3 cut(s) 700, 1177, 1211
BseJI GATNNNNATC 2 cut(s) 1206, 1761
BseLI CCNNNNNNNGG 2 cut(s) 227, 734
BseMII CTCAG 1 cut(s) 2145
BseNI ACTGG 3 cut(s) 638, 2082, 2096
BseRI GAGGAG 2 cut(s) 803, 2173
BseXI GCAGC 5 cut(s) 849, 1074, 1611, 1921, 2078
Bsh1236I CGCG 1 cut(s) 1408
BsiHKAI GWGCWC 2 cut(s) 162, 524
BsiSI CCGG 1 cut(s) 27
BslFI GGGAC 2 cut(s) 1086, 1149
BslI CCNNNNNNNGG 2 cut(s) 227, 734
BsmAI GTCTC 3 cut(s) 1545, 1635, 1946
BsmFI GGGAC 2 cut(s) 1086, 1149
BsmI GAATGC 1 cut(s) 1003
Bsp1286I GDGCHC 3 cut(s) 162, 222, 524
Bsp13I TCCGGA 1 cut(s) 26
Bsp1407I TGTACA 1 cut(s) 1051
Bsp143I GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
Bsp1720I GCTNAGC 1 cut(s) 1568
BspACI CCGC 1 cut(s) 1818
BspCNI CTCAG 1 cut(s) 2146
BspEI TCCGGA 1 cut(s) 26
BspFNI CGCG 1 cut(s) 1408
BspHI TCATGA 2 cut(s) 256, 1633
BspLI GGNNCC 3 cut(s) 114, 381, 1503
BspMAI CTGCAG 2 cut(s) 1092, 1629
BspMI ACCTGC 2 cut(s) 1325, 1345
BspPI GGATC 4 cut(s) 1119, 1496, 1509, 1757
BspQI GCTCTTC 4 cut(s) 150, 180, 210, 1077
BspTI CTTAAG 2 cut(s) 503, 2020
BsrGI TGTACA 1 cut(s) 1051
BsrI ACTGG 3 cut(s) 638, 2082, 2096
BssECI CCNNGG 3 cut(s) 700, 1177, 1211
BssMI GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
BssT1I CCWWGG 2 cut(s) 1177, 1211
Bst4CI ACNGT 3 cut(s) 1957, 2131, 2143
Bst6I CTCTTC 5 cut(s) 150, 180, 210, 1020, 1077
BstAFI CTTAAG 2 cut(s) 503, 2020
BstAUI TGTACA 1 cut(s) 1051
BstC8I GCNNGC 1 cut(s) 1092
BstDEI CTNAG 7 cut(s) 386, 566, 691, 986, 1568, 1824, 2154
BstDSI CCRYGG 1 cut(s) 700
BstFNI CGCG 1 cut(s) 1408
BstKTI GATC 8 cut(s) 394, 529, 1114, 1504, 1546, 1765, 2201, 2293
BstMAI GTCTC 3 cut(s) 1545, 1635, 1946
BstMBI GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
BstNSI RCATGY 1 cut(s) 2002
BstSFI CTRYAG 3 cut(s) 1088, 1625, 1656
BstUI CGCG 1 cut(s) 1408
BstV1I GCAGC 5 cut(s) 849, 1074, 1611, 1921, 2078
BstV2I GAAGAC 1 cut(s) 2001
BstX2I RGATCY 3 cut(s) 391, 1111, 1501
BstXI CCANNNNNNTGG 1 cut(s) 333
BstYI RGATCY 3 cut(s) 391, 1111, 1501
BtgI CCRYGG 1 cut(s) 700
BtgZI GCGATG 1 cut(s) 1363
BtsI GCAGTG 1 cut(s) 1296
BtsIMutI CAGTG 5 cut(s) 162, 222, 522, 631, 1296
BveI ACCTGC 2 cut(s) 1325, 1345
Cac8I GCNNGC 1 cut(s) 1092
CciI TCATGA 2 cut(s) 256, 1633
Cfr13I GGNCC 2 cut(s) 380, 410
CseI GACGC 3 cut(s) 551, 810, 1772
Csp6I GTAC 3 cut(s) 276, 1052, 1100
CviAII CATG 7 cut(s) 257, 512, 581, 1055, 1573, 1634, 1999
CviQI GTAC 3 cut(s) 276, 1052, 1100
DdeI CTNAG 7 cut(s) 386, 566, 691, 986, 1568, 1824, 2154
DpnI GATC 8 cut(s) 393, 528, 1113, 1503, 1545, 1764, 2200, 2292
DpnII GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
DraI TTTAAA 2 cut(s) 1047, 1248
DraIII CACNNNGTG 1 cut(s) 1230
DriI GACNNNNNGTC 1 cut(s) 1153
Eam1104I CTCTTC 5 cut(s) 150, 180, 210, 1020, 1077
Eam1105I GACNNNNNGTC 1 cut(s) 1153
EarI CTCTTC 5 cut(s) 150, 180, 210, 1020, 1077
Eco130I CCWWGG 2 cut(s) 1177, 1211
Eco24I GRGCYC 1 cut(s) 222
Eco32I GATATC 2 cut(s) 1204, 1873
Eco47I GGWCC 2 cut(s) 380, 410
Eco57I CTGAAG 2 cut(s) 1683, 2133
EcoO109I RGGNCCY 1 cut(s) 380
EcoRI GAATTC 1 cut(s) 1906
EcoRV GATATC 2 cut(s) 1204, 1873
EcoT14I CCWWGG 2 cut(s) 1177, 1211
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 2 cut(s) 1177, 1211
FaeI CATG 7 cut(s) 260, 515, 584, 1058, 1576, 1637, 2002
FalI AAGNNNNNCTT 2 cut(s) 1461, 1493
FaqI GGGAC 2 cut(s) 1086, 1149
FatI CATG 7 cut(s) 256, 511, 580, 1054, 1572, 1633, 1998
FauNDI CATATG 1 cut(s) 867
FbaI TGATCA 2 cut(s) 526, 2290
FblI GTMKAC 1 cut(s) 799
Fnu4HI GCNGC 6 cut(s) 863, 1088, 1625, 1819, 1935, 2092
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 6 cut(s) 863, 1088, 1625, 1819, 1935, 2092
FspBI CTAG 4 cut(s) 108, 752, 1212, 2055
GluI GCNGC 6 cut(s) 863, 1088, 1625, 1819, 1935, 2092
GsuI CTGGAG 2 cut(s) 399, 655
HapII CCGG 1 cut(s) 27
HgaI GACGC 3 cut(s) 551, 810, 1772
Hin1II CATG 7 cut(s) 260, 515, 584, 1058, 1576, 1637, 2002
HincII GTYRAC 2 cut(s) 73, 2127
HindII GTYRAC 2 cut(s) 73, 2127
HindIII AAGCTT 1 cut(s) 597
HinfI GANTC 4 cut(s) 1009, 1380, 1417, 1446
HpaI GTTAAC 2 cut(s) 73, 2127
HpaII CCGG 1 cut(s) 27
HphI GGTGA 2 cut(s) 953, 1588
Hpy166II GTNNAC 4 cut(s) 73, 131, 800, 2127
Hpy188I TCNGA 4 cut(s) 817, 852, 1897, 1981
Hpy8I GTNNAC 4 cut(s) 73, 131, 800, 2127
HpyAV CCTTC 5 cut(s) 113, 370, 1357, 1836, 2302
HpyCH4III ACNGT 3 cut(s) 1957, 2131, 2143
HpyCH4IV ACGT 3 cut(s) 433, 1315, 1861
HpyF3I CTNAG 7 cut(s) 386, 566, 691, 986, 1568, 1824, 2154
HpySE526I ACGT 3 cut(s) 433, 1315, 1861
Hsp92II CATG 7 cut(s) 260, 515, 584, 1058, 1576, 1637, 2002
Kpn2I TCCGGA 1 cut(s) 26
Ksp22I TGATCA 2 cut(s) 526, 2290
KspAI GTTAAC 2 cut(s) 73, 2127
Kzo9I GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
LguI GCTCTTC 4 cut(s) 150, 180, 210, 1077
LmnI GCTCC 2 cut(s) 508, 790
Lsp1109I GCAGC 5 cut(s) 849, 1074, 1611, 1921, 2078
LweI GCATC 4 cut(s) 139, 292, 904, 1708
MaeI CTAG 4 cut(s) 108, 752, 1212, 2055
MaeII ACGT 3 cut(s) 433, 1315, 1861
MaeIII GTNAC 3 cut(s) 959, 2137, 2208
MalI GATC 8 cut(s) 393, 528, 1113, 1503, 1545, 1764, 2200, 2292
MboI GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
MfeI CAATTG 3 cut(s) 663, 1481, 2272
MflI RGATCY 3 cut(s) 391, 1111, 1501
MhlI GDGCHC 3 cut(s) 162, 222, 524
MluI ACGCGT 1 cut(s) 1406
MlyI GAGTC 2 cut(s) 1018, 1426
MroI TCCGGA 1 cut(s) 26
MslI CAYNNNNRTG 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 2153
MspCI CTTAAG 2 cut(s) 503, 2020
MspI CCGG 1 cut(s) 27
MssI GTTTAAAC 1 cut(s) 1248
MunI CAATTG 3 cut(s) 663, 1481, 2272
Mva1269I GAATGC 1 cut(s) 1003
MvnI CGCG 1 cut(s) 1408
NdeI CATATG 1 cut(s) 867
NdeII GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
NlaIII CATG 7 cut(s) 260, 515, 584, 1058, 1576, 1637, 2002
NlaIV GGNNCC 3 cut(s) 114, 381, 1503
NmuCI GTSAC 2 cut(s) 959, 2208
NspI RCATGY 1 cut(s) 2002
PagI TCATGA 2 cut(s) 256, 1633
PciI ACATGT 1 cut(s) 1998
PciSI GCTCTTC 4 cut(s) 150, 180, 210, 1077
PctI GAATGC 1 cut(s) 1003
PfeI GAWTC 2 cut(s) 1380, 1446
PkrI GCNGC 6 cut(s) 864, 1089, 1626, 1820, 1936, 2093
PleI GAGTC 2 cut(s) 1017, 1425
PmeI GTTTAAAC 1 cut(s) 1248
PpsI GAGTC 2 cut(s) 1017, 1425
PpuMI RGGWCCY 1 cut(s) 380
PscI ACATGT 1 cut(s) 1998
PshBI ATTAAT 1 cut(s) 537
Psp1406I AACGTT 1 cut(s) 1861
Psp5II RGGWCCY 1 cut(s) 380
PspN4I GGNNCC 3 cut(s) 114, 381, 1503
PspPI GGNCC 2 cut(s) 380, 410
PspPPI RGGWCCY 1 cut(s) 380
PstI CTGCAG 2 cut(s) 1092, 1629
PsuI RGATCY 3 cut(s) 391, 1111, 1501
PvuII CAGCTG 1 cut(s) 2153
RsaI GTAC 3 cut(s) 277, 1053, 1101
RsaNI GTAC 3 cut(s) 276, 1052, 1100
RseI CAYNNNNRTG 1 cut(s) 165
SapI GCTCTTC 4 cut(s) 150, 180, 210, 1077
SatI GCNGC 6 cut(s) 863, 1088, 1625, 1819, 1935, 2092
Sau3AI GATC 8 cut(s) 391, 526, 1111, 1501, 1543, 1762, 2198, 2290
Sau96I GGNCC 2 cut(s) 380, 410
SchI GAGTC 2 cut(s) 1018, 1426
SduI GDGCHC 3 cut(s) 162, 222, 524
SfaNI GCATC 4 cut(s) 139, 292, 904, 1708
SfcI CTRYAG 3 cut(s) 1088, 1625, 1656
SinI GGWCC 2 cut(s) 380, 410
SmiMI CAYNNNNRTG 1 cut(s) 165
SmlI CTYRAG 3 cut(s) 503, 1949, 2020
SmoI CTYRAG 3 cut(s) 503, 1949, 2020
SsiI CCGC 1 cut(s) 1818
SspI AATATT 5 cut(s) 20, 316, 923, 1308, 2121
SspMI CTAG 4 cut(s) 108, 752, 1212, 2055
StyI CCWWGG 2 cut(s) 1177, 1211
TaaI ACNGT 3 cut(s) 1957, 2131, 2143
TaiI ACGT 3 cut(s) 436, 1318, 1864
TaqI TCGA 2 cut(s) 2116, 2243
TatI WGTACW 1 cut(s) 1051
TauI GCSGC 1 cut(s) 1821
TfiI GAWTC 2 cut(s) 1380, 1446
TscAI CASTG 5 cut(s) 169, 229, 529, 638, 1296
TseFI GTSAC 2 cut(s) 959, 2208
TseI GCWGC 5 cut(s) 862, 1087, 1624, 1934, 2091
Tsp45I GTSAC 2 cut(s) 959, 2208
TspGWI ACGGA 2 cut(s) 689, 1218
TspRI CASTG 5 cut(s) 169, 229, 529, 638, 1296
Vha464I CTTAAG 2 cut(s) 503, 2020
VpaK11BI GGWCC 2 cut(s) 380, 410
VspI ATTAAT 1 cut(s) 537
XapI RAATTY 8 cut(s) 446, 671, 819, 1273, 1590, 1788, 1906, 2068
XceI RCATGY 1 cut(s) 2002
XmaJI CCTAGG 1 cut(s) 1211
XmiI GTMKAC 1 cut(s) 799
XspI CTAG 4 cut(s) 108, 752, 1212, 2055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.