Rorug02G0362300

Zinc finger MYM-type protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
45972668 .. 45979935
7268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0362300.1

Sequence Viewer

Length: 1917 bp
ATGGACGCAATGGACTATAGCTCTGATGAAGAATCAGATATCAGTGAATCTGAGATCAGTGACTACAAAGATAAACCATACGAGCAGTTACGAATTGGAAAGTTGAAAGTAAAGGGTCCTAATGGCACTCTCCGATGCCCCTTTTGTGCTGGGAAGAAGAAACAAGATTATAAGTACAAGGATCTGCTTCAACATGCTTCCGGGGTGGCTAAAGGTTCTGCTAACAGAAGCGCAGTCCAAAAGGCCAACCACCTTGCCTTAGCCCTCTATTTGGAGAAGGAGTTAGCTAGTGAAGCAGATCAAACCCAGCGTCCGGCTCCTCCCAAACCTGTTGTTAAAGAGGAGAAGCCAGAAGATCTATATGTGTGGCCTTGGACTGGTGTTGTTGCAAATATATTGTTGAGCCAGCCAAAGGATGGGAAAGATTTGCTCGACTCTGGGTATTGGTTGAAAAAGTTCTCCAAGTATAGACCTGCAGAAGTGCATACATTCTTTAATGAAGAGGAACAAGCGGCAGGGGCTGTCGTAGTTTTTAGTAAAGATTGGAATGGCTTCGGGAATGCTACGGATTTTGAAAAGATGTTCATATCCGATAGTCACGGGAAAGAGCATTGGTTTGCACGAAAGCAACAGCCTGGTTCAAGTATTTATGGGTGGTGTGCGCGCTCTGATGATTATGATTCCCAAGGACCAGTGGGGGAATTCCTTCGCAAGAGAGGACAGCTTCGAACGGTATCGGACATTGTCCAGGAAGCAGCCCAAAGCAAAAGTAATGTTGTGGCAAACCTAGCCAATAAAATTGATTTGACAAATGAAAATCTGGATGAACTTCGATACAAATACAATGAGAATGCCCTGTCTTTAAGTAGGATGCTAGAAGAAAAAGACAGGCTACATAATGCCTTTGTTGAAGAATCAAGGAGAATGCAGACGATGTCACGAGATAATGTTCGGAGAATATTAGATGAGCAAGAGAAGTTGAATTACGAGTTGGAGTTTAAGAAAAAGAAACTTGATTCCTGGAGAAAAGAATTAAACAAACGTGAAGCACTAACTGAACGTGAGAGGCAAAAACTTGACGAGGATAAAAAGAAGAACGATGAGAGAAACAATTCGCTTCAATTGGCTTCTGCGGAGCAGAAAAAGGCGGATGAGAGTGTCTTGAGGCTGGTTGAACAACAAAAGAGGGAAAAAGAGGATGCCTTAAATAAAATACTTCAGTTAGAAAAGCAATTGAATGCCAAACAGAAGGTAGAAATGGAAATTGAAGAACTAAAAGGTAAATTAGAGGTGATGAAGCATCTTGGGGATCAAGATGATGATGCTGTTCAAAAGAAGATGAAAGACATGAAACAAGAATTGGGGGAAAAAATTGAAGAGCTTGAGGATTTGGAATCTCTGAATCAAACTCTAATCGCCAAAGAGCGACAGAGCAATGATGAGTTACAAGAAGCTCGTAAAGAATTAATAAAAGGTTTGACTGACATGTTGGCTGGTCGATCTCATATTGGGATTAAGAGAATGGGAGAGCTGGATCAAAAGCCCTTCCTCAACACGTGCAAGTTAAGATTTCCTCTCGAGGAAGCAGGGGTTCAGGCCTTAACTCTATGCTCCTTGTGGCAGGAAAATCTGAAAGATCCAGATTGGCATCCTTTCAAGGTGATAGAGAAAGATGGGAATCATGAGGAAATCATCAATGAGGAAGATGAGAAGCTACATAATCTGAAGGAAGAGTGGGGGGTTGAGATATATGATTGTGTTGTTACAGCTTTAAAAGAGCTTAATGAGTATAATCCAAGTGGGCGGTATGTTATTCCTGAGCTCTGGAACATAAAAGAAGGAAGAAAAGCCACATTGAAGGAGGTTATTGCCTCTATCTTGAAGAATATTAAGACACTCAAGCGAAAGAGAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

638

Amino Acids

73.89

Weight (kDa)

5.84

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-XS PF03470 46 - 88 4.9e-21 XS zinc finger domain
XS PF03468 118 - 228 4.7e-34 XS domain
XH PF03469 506 - 636 4.1e-58 XH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000034)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34070
fragaria_vesca FvH4_1g00961 FvH4_1g10351 FvH4_1g15351 FvH4_1g26571 FvH4_1g26621 FvH4_1g28434 FvH4_2g00591 FvH4_2g06411 FvH4_2g16831 FvH4_2g20161 FvH4_2g23291 FvH4_3g04191 FvH4_3g07021 FvH4_3g17162 FvH4_3g17262 FvH4_3g38081 FvH4_3g39581 FvH4_3g45090 FvH4_4g05782 FvH4_4g05872 FvH4_4g13041 FvH4_4g23411 FvH4_4g24051 FvH4_4g26452 FvH4_4g26453 FvH4_4g27903 FvH4_4g33449 FvH4_5g01072 FvH4_5g03532 FvH4_5g04140 FvH4_5g06631 FvH4_5g09401 FvH4_5g09403 FvH4_5g20624 FvH4_5g20701 FvH4_5g21971 FvH4_5g36481 FvH4_5g38691 FvH4_6g11492 FvH4_6g19792 FvH4_6g20601 FvH4_6g24641 FvH4_6g34291 FvH4_6g36662 FvH4_6g36681 FvH4_6g36682 FvH4_6g36682 FvH4_6g36682 FvH4_6g36770 FvH4_6g36981 FvH4_6g37021 FvH4_6g37022 FvH4_6g43610 FvH4_7g10872 FvH4_7g10872 FvH4_7g16100 FvH4_7g19191 FvH4_7g23761 FvH4_7g24921
malus_domestica MD01G1077600.v1.1 MD02G1010600.v1.1 MD03G1059500.v1.1 MD04G1024600.v1.1 MD04G1101800.v1.1 MD04G1151700.v1.1 MD05G1025000.v1.1 MD05G1129300.v1.1 MD05G1320000.v1.1 MD06G1136100.v1.1 MD08G1157400.v1.1 MD09G1041800.v1.1 MD10G1109600.v1.1 MD10G1255600.v1.1 MD11G1108900.v1.1 MD11G1145100.v1.1 MD11G1242500.v1.1 MD12G1113300.v1.1 MD12G1231800.v1.1 MD13G1099200.v1.1 MD13G1142500.v1.1 MD15G1114200.v1.1 MD15G1119400.v1.1 MD15G1372100.v1.1 MD16G1038200.v1.1 MD16G1163700.v1.1 MD17G1055600.v1.1 MD17G1089000.v1.1 MD17G1109500.v1.1
prunus_persica Prupe.1G091500_v2.0.a1 Prupe.1G170400_v2.0.a1 Prupe.2G074700_v2.0.a1 Prupe.3G024500_v2.0.a1 Prupe.3G026300_v2.0.a1 Prupe.3G245500_v2.0.a1 Prupe.4G199600_v2.0.a1 Prupe.4G230800_v2.0.a1 Prupe.4G238700_v2.0.a1 Prupe.6G052200_v2.0.a1 Prupe.8G080900_v2.0.a1 Prupe.8G084200_v2.0.a1 Prupe.8G185000_v2.0.a1 Prupe.8G185100_v2.0.a1
pyrus_communis pycom01g07890 pycom01g09690 pycom01g14780 pycom01g18640 pycom03g07210 pycom05g03010 pycom05g11250 pycom05g23340 pycom05g27720 pycom06g05610 pycom06g12180 pycom09g06110 pycom09g08430 pycom10g16550 pycom11g03760 pycom11g24270 pycom12g12290 pycom13g10850 pycom13g18230 pycom13g22260 pycom13g27850 pycom14g17700 pycom15g07910 pycom15g26210 pycom15g26440 pycom15g29540 pycom16g00280 pycom16g18160 pycom17g16360 pycom17g19900
rosa_chinensis RchiOBHm_Chr1g0313671 RchiOBHm_Chr1g0322301 RchiOBHm_Chr1g0334441 RchiOBHm_Chr1g0337651 RchiOBHm_Chr1g0337711 RchiOBHm_Chr1g0339131 RchiOBHm_Chr1g0344491 RchiOBHm_Chr1g0347771 RchiOBHm_Chr1g0349331 RchiOBHm_Chr1g0354241 RchiOBHm_Chr1g0355351 RchiOBHm_Chr1g0376111 RchiOBHm_Chr1g0379881 RchiOBHm_Chr1g0384421 RchiOBHm_Chr2g0101531 RchiOBHm_Chr2g0117741 RchiOBHm_Chr2g0126581 RchiOBHm_Chr2g0129181 RchiOBHm_Chr2g0136201 RchiOBHm_Chr2g0137991 RchiOBHm_Chr2g0156571 RchiOBHm_Chr2g0159441 RchiOBHm_Chr2g0164131 RchiOBHm_Chr2g0174291 RchiOBHm_Chr2g0175161 RchiOBHm_Chr3g0448481 RchiOBHm_Chr3g0450851 RchiOBHm_Chr3g0450861 RchiOBHm_Chr3g0461251 RchiOBHm_Chr3g0463031 RchiOBHm_Chr3g0465981 RchiOBHm_Chr3g0472811 RchiOBHm_Chr3g0472821 RchiOBHm_Chr3g0480521 RchiOBHm_Chr3g0480531 RchiOBHm_Chr3g0482021 RchiOBHm_Chr3g0496771 RchiOBHm_Chr4g0393151 RchiOBHm_Chr4g0407171 RchiOBHm_Chr4g0431731 RchiOBHm_Chr4g0432071 RchiOBHm_Chr4g0436951 RchiOBHm_Chr5g0000711 RchiOBHm_Chr5g0004361 RchiOBHm_Chr5g0012631 RchiOBHm_Chr5g0025271 RchiOBHm_Chr5g0032551 RchiOBHm_Chr5g0038991 RchiOBHm_Chr5g0043811 RchiOBHm_Chr5g0058511 RchiOBHm_Chr5g0077241 RchiOBHm_Chr5g0079981 RchiOBHm_Chr5g0083071 RchiOBHm_Chr6g0256871 RchiOBHm_Chr6g0266721 RchiOBHm_Chr6g0299971 RchiOBHm_Chr6g0304931 RchiOBHm_Chr7g0177331 RchiOBHm_Chr7g0182851 RchiOBHm_Chr7g0190501 RchiOBHm_Chr7g0200091 RchiOBHm_Chr7g0203981 RchiOBHm_Chr7g0206011 RchiOBHm_Chr7g0206111 RchiOBHm_Chr7g0206441 RchiOBHm_Chr7g0220151 RchiOBHm_Chr7g0234441 RchiOBHm_Chr7g0234661 RchiOBHm_Chr7g0238281
rosa_laevigata RLG00000003338 RLG00000020373 RLG00000020377 RLG00000020415 RLG00000020416 RLG00000026600
rosa_multiflora Rmu_co8214922.1_g000001 Rmu_co8257903.1_g000001 Rmu_co8295123.1_g000001 Rmu_sc0000177.1_g000007 Rmu_sc0000614.1_g000005 Rmu_sc0000648.1_g000003 Rmu_sc0000809.1_g000004 Rmu_sc0001044.1_g000022 Rmu_sc0001211.1_g000100 Rmu_sc0001306.1_g000013 Rmu_sc0001493.1_g000053 Rmu_sc0001605.1_g000001 Rmu_sc0001706.1_g000033 Rmu_sc0001966.1_g000037 Rmu_sc0002080.1_g000051 Rmu_sc0002244.1_g000027 Rmu_sc0002669.1_g000045 Rmu_sc0002806.1_g000013 Rmu_sc0003012.1_g000028 Rmu_sc0003074.1_g000019 Rmu_sc0003180.1_g000020 Rmu_sc0003229.1_g000006 Rmu_sc0003229.1_g000015 Rmu_sc0003267.1_g000017 Rmu_sc0003387.1_g000008 Rmu_sc0004109.1_g000011 Rmu_sc0004483.1_g000021 Rmu_sc0004729.1_g000018 Rmu_sc0005124.1_g000007 Rmu_sc0006187.1_g000007 Rmu_sc0006311.1_g000005 Rmu_sc0006323.1_g000009 Rmu_sc0006619.1_g000003 Rmu_sc0006619.1_g000004 Rmu_sc0007216.1_g000004 Rmu_sc0012033.1_g000003 Rmu_sc0012414.1_g000003 Rmu_sc0013716.1_g000004 Rmu_sc0017020.1_g000002 Rmu_sc0017650.1_g000008 Rmu_sc0022997.1_g000002 Rmu_sc0026059.1_g000001 Rmu_sc0034277.1_g000001 Rmu_sc0038462.1_g000001 Rmu_ssc0000134.1_g000019 Rmu_ssc0000326.1_g000010 Rmu_ssc0000337.1_g000002
rosa_roxburghii Rroxscaffold_153G00436580 Rroxscaffold_1G00005540 Rroxscaffold_1G00007910 Rroxscaffold_1G00020780 Rroxscaffold_1G00024800 Rroxscaffold_1G00028530 Rroxscaffold_1G00035960 Rroxscaffold_1G00060770 Rroxscaffold_1G00063880 Rroxscaffold_1G00072730 Rroxscaffold_2G00090480 Rroxscaffold_2G00098360 Rroxscaffold_2G00098380 Rroxscaffold_2G00098390 Rroxscaffold_2G00098410 Rroxscaffold_2G00098420 Rroxscaffold_2G00099480 Rroxscaffold_2G00122440 Rroxscaffold_2G00130690 Rroxscaffold_2G00132840 Rroxscaffold_3G00259940 Rroxscaffold_3G00262860 Rroxscaffold_3G00262870 Rroxscaffold_3G00262880 Rroxscaffold_3G00262890 Rroxscaffold_4G00296680 Rroxscaffold_4G00315340 Rroxscaffold_5G00341760 Rroxscaffold_5G00350520 Rroxscaffold_5G00365550 Rroxscaffold_5G00367740 Rroxscaffold_5G00375090 Rroxscaffold_5G00377290 Rroxscaffold_6G00400710 Rroxscaffold_6G00402880 Rroxscaffold_6G00418980 Rroxscaffold_6G00419370 Rroxscaffold_6G00430760 Rroxscaffold_7G00161960 Rroxscaffold_7G00166140 Rroxscaffold_7G00175330 Rroxscaffold_7G00206820 Rroxscaffold_7G00212670
rosa_rugosa Rorug01G0429300 Rorug01G0429400 Rorug02G0276300 Rorug02G0362300 Rorug02G0412000 Rorug04G0283500.1 Rorug05G0121800 Rorug05G0138500 Rorug05G0138600 Rorug05G0221000 Rorug05G0556000 Rorug07G0094400 Rorug07G0119200
rosa_samantha Rh1AG022500 Rh1AG214800 Rh1AG295500 Rh1DG290300 Rh2AG469300 Rh2AG469600 Rh2AG469800 Rh2AG470000 Rh2AG472200 Rh2AG472300 Rh2AG472400 Rh2BG358100 Rh2BG456100 Rh2BG481900 Rh2BG482100 Rh2BG482300 Rh2BG482400 Rh2BG484300 Rh2BG484400 Rh2CG255600 Rh2CG455400 Rh2CG455500 Rh2CG455600 Rh2CG455900 Rh2CG456100 Rh2CG458100 Rh2CG458200 Rh2CG458300 Rh2DG466000 Rh2DG490700 Rh2DG490900 Rh2DG491100 Rh2DG491200 Rh2DG493500 Rh2DG493600 Rh4AG091000 Rh4BG347200 Rh4CG082200 Rh4CG099300 Rh5AG230100 Rh5AG230300 Rh5AG302500 Rh5AG302600 Rh5BG214100 Rh5BG231000 Rh5BG231100 Rh5BG310700 Rh5BG543300 Rh5CG238000 Rh5CG259000 Rh5CG259100 Rh5CG566500 Rh5DG027500 Rh5DG218700 Rh5DG236100 Rh5DG236300 Rh6AG285400 Rh6BG286900 Rh6BG376000 Rh6DG235600 Rh6DG280900 Rh6DG368700 Rh6DG423800 Rh7AG106800 Rh7AG226500 Rh7AG227900 Rh7AG228000 Rh7AG229300 Rh7BG097000 Rh7BG121300 Rh7BG129300 Rh7BG130100 Rh7BG222700 Rh7BG225700 Rh7BG225800 Rh7CG111500 Rh7CG131300 Rh7CG131600 Rh7CG131700 Rh7CG132100 Rh7CG132400 Rh7CG132500 Rh7CG132700 Rh7CG132900 Rh7CG221800 Rh7CG242400 Rh7CG242500 Rh7CG243800 Rh7CG244000 Rh7CG365700 Rh7DG109900 Rh7DG110000 Rh7DG129000 Rh7DG130400 Rh7DG236200 Rh7DG236300
rosa_wichuraiana Rw0G001140 Rw0G001660 Rw0G003710 Rw0G003800 Rw0G005640 Rw0G009930 Rw1G005610 Rw1G011690 Rw1G018880 Rw1G026950 Rw1G029360 Rw1G032170 Rw1G035710 Rw2G023950 Rw2G030240 Rw2G038210 Rw2G038490 Rw2G038500 Rw2G054270 Rw3G009830 Rw4G005830 Rw4G006210 Rw4G006690 Rw4G014470 Rw4G015560 Rw4G021550 Rw4G033420 Rw4G034150 Rw5G000890 Rw5G002510 Rw5G002580 Rw5G003440 Rw5G009960 Rw5G024480 Rw5G032910 Rw5G032990 Rw5G035340 Rw5G042620 Rw6G004790 Rw6G012300 Rw6G017050 Rw6G019300 Rw6G026800 Rw6G027320 Rw6G039180 Rw7G010750 Rw7G010920 Rw7G014890 Rw7G016540 Rw7G019730 Rw7G022510 Rw7G023070 Rw7G038740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 171
Acc36I ACCTGC 1 cut(s) 481
AccB7I CCANNNNNTGG 1 cut(s) 416
AccII CGCG 1 cut(s) 664
AciI CCGC 4 cut(s) 512, 1133, 1148, 1804
AclWI GGATC 4 cut(s) 189, 1317, 1542, 1631
AcsI RAATTY 1 cut(s) 701
AcuI CTGAAG 2 cut(s) 1202, 1745
AcvI CACGTG 1 cut(s) 1557
AfaI GTAC 1 cut(s) 176
AfiI CCNNNNNNNGG 5 cut(s) 271, 313, 377, 412, 416
AflIII ACRYGT 2 cut(s) 1485, 1554
AjnI CCWGG 3 cut(s) 634, 747, 1019
AjuI GAANNNNNNNTTGG 4 cut(s) 974, 1006, 1343, 1375
Alw21I GWGCWC 1 cut(s) 1824
AlwI GGATC 4 cut(s) 189, 1317, 1542, 1631
AlwNI CAGNNNCTG 1 cut(s) 521
Ama87I CYCGRG 1 cut(s) 1577
AoxI GGCC 3 cut(s) 243, 368, 1596
ApeKI GCWGC 1 cut(s) 755
ApoI RAATTY 1 cut(s) 701
ArsI GACNNNNNNTTYG 2 cut(s) 295, 327
AseI ATTAAT 1 cut(s) 1466
Asp700I GAANNNNTTC 4 cut(s) 455, 551, 705, 1111
AspLEI GCGC 3 cut(s) 233, 664, 666
AspS9I GGNCC 2 cut(s) 116, 689
AsuC2I CCSGG 1 cut(s) 202
AsuHPI GGTGA 2 cut(s) 1303, 1672
AsuII TTCGAA 1 cut(s) 727
AvaI CYCGRG 1 cut(s) 1577
AvaII GGWCC 2 cut(s) 116, 689
BanII GRGCYC 1 cut(s) 1824
BarI GAAGNNNNNNTAC 2 cut(s) 968, 1000
BauI CACGAG 1 cut(s) 939
BbrPI CACGTG 1 cut(s) 1557
Bbv12I GWGCWC 1 cut(s) 1824
BbvI GCAGC 1 cut(s) 767
BccI CCATC 2 cut(s) 410, 1667
BciT130I CCWGG 3 cut(s) 636, 749, 1021
BcnI CCSGG 1 cut(s) 202
BfaI CTAG 3 cut(s) 288, 788, 875
BfmI CTRYAG 2 cut(s) 16, 474
BfuAI ACCTGC 1 cut(s) 481
BglII AGATCT 1 cut(s) 355
BisI GCNGC 2 cut(s) 513, 756
BlsI GCNGC 2 cut(s) 514, 757
Bme1390I CCNGG 4 cut(s) 202, 636, 749, 1021
Bme18I GGWCC 2 cut(s) 116, 689
BmeT110I CYCGRG 1 cut(s) 1577
BmgT120I GGNCC 2 cut(s) 116, 689
BmiI GGNNCC 2 cut(s) 117, 318
BmrFI CCNGG 4 cut(s) 202, 636, 749, 1021
BmsI GCATC 6 cut(s) 125, 861, 1189, 1309, 1312, 1657
BpmI CTGGAG 1 cut(s) 1042
Bpu10I CCTNAGC 2 cut(s) 259, 1818
Bpu14I TTCGAA 1 cut(s) 727
BpuEI CTTGAG 3 cut(s) 1183, 1403, 1883
BpuMI CCSGG 1 cut(s) 202
BsaAI YACGTR 1 cut(s) 1557
BsaBI GATNNNNATC 2 cut(s) 1647, 1677
BsaJI CCNNGG 3 cut(s) 201, 371, 685
BsaXI ACNNNNNCTCC 2 cut(s) 266, 296
Bsc4I CCNNNNNNNGG 5 cut(s) 271, 313, 377, 412, 416
Bse1I ACTGG 2 cut(s) 382, 692
Bse3DI GCAATG 2 cut(s) 15, 1441
Bse8I GATNNNNATC 2 cut(s) 1647, 1677
BseBI CCWGG 3 cut(s) 636, 749, 1021
BseDI CCNNGG 3 cut(s) 201, 371, 685
BseGI GGATG 6 cut(s) 421, 829, 876, 1156, 1204, 1648
BseJI GATNNNNATC 2 cut(s) 1647, 1677
BseLI CCNNNNNNNGG 5 cut(s) 271, 313, 377, 412, 416
BseMI GCAATG 2 cut(s) 15, 1441
BseMII CTCAG 2 cut(s) 42, 1809
BseNI ACTGG 2 cut(s) 382, 692
BsePI GCGCGC 1 cut(s) 662
BseRI GAGGAG 2 cut(s) 309, 356
BseXI GCAGC 1 cut(s) 767
BseYI CCCAGC 2 cut(s) 149, 306
Bsh1236I CGCG 1 cut(s) 664
BshFI GGCC 3 cut(s) 245, 370, 1598
BsiHKAI GWGCWC 1 cut(s) 1824
BsiHKCI CYCGRG 1 cut(s) 1577
BsiSI CCGG 2 cut(s) 201, 314
BslI CCNNNNNNNGG 5 cut(s) 271, 313, 377, 412, 416
BsmI GAATGC 4 cut(s) 565, 856, 930, 1243
BsnI GGCC 3 cut(s) 245, 370, 1598
BsoBI CYCGRG 1 cut(s) 1577
Bsp119I TTCGAA 1 cut(s) 727
Bsp1286I GDGCHC 1 cut(s) 1824
Bsp143I GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
BspACI CCGC 4 cut(s) 512, 1133, 1148, 1804
BspANI GGCC 3 cut(s) 245, 370, 1598
BspCNI CTCAG 2 cut(s) 43, 1810
BspFNI CGCG 1 cut(s) 664
BspHI TCATGA 1 cut(s) 1681
BspLI GGNNCC 2 cut(s) 117, 318
BspMAI CTGCAG 1 cut(s) 478
BspMI ACCTGC 1 cut(s) 481
BspPI GGATC 4 cut(s) 189, 1317, 1542, 1631
BspQI GCTCTTC 1 cut(s) 1371
BspT104I TTCGAA 1 cut(s) 727
BsrDI GCAATG 2 cut(s) 15, 1441
BsrI ACTGG 2 cut(s) 382, 692
BssECI CCNNGG 3 cut(s) 201, 371, 685
BssHII GCGCGC 1 cut(s) 662
BssMI GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
BssSI CACGAG 1 cut(s) 939
BssT1I CCWWGG 2 cut(s) 371, 685
Bst2BI CACGAG 1 cut(s) 939
Bst2UI CCWGG 3 cut(s) 636, 749, 1021
Bst4CI ACNGT 1 cut(s) 733
Bst6I CTCTTC 3 cut(s) 495, 1371, 1725
BstBAI YACGTR 1 cut(s) 1557
BstBI TTCGAA 1 cut(s) 727
BstC8I GCNNGC 2 cut(s) 407, 664
BstDEI CTNAG 3 cut(s) 51, 259, 1818
BstF5I GGATG 6 cut(s) 421, 829, 876, 1156, 1204, 1648
BstFNI CGCG 1 cut(s) 664
BstHHI GCGC 3 cut(s) 233, 664, 666
BstKTI GATC 8 cut(s) 57, 184, 301, 358, 1312, 1502, 1537, 1639
BstMBI GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
BstMWI GCNNNNNNNGC 3 cut(s) 293, 518, 788
BstNI CCWGG 3 cut(s) 636, 749, 1021
BstNSI RCATGY 2 cut(s) 197, 1489
BstSCI CCNGG 4 cut(s) 200, 634, 747, 1019
BstSFI CTRYAG 2 cut(s) 16, 474
BstUI CGCG 1 cut(s) 664
BstV1I GCAGC 1 cut(s) 767
BstX2I RGATCY 3 cut(s) 181, 355, 1636
BstYI RGATCY 3 cut(s) 181, 355, 1636
BsuRI GGCC 3 cut(s) 245, 370, 1598
BtsCI GGATG 6 cut(s) 421, 829, 876, 1156, 1204, 1648
BtsIMutI CAGTG 3 cut(s) 49, 64, 699
BveI ACCTGC 1 cut(s) 481
Cac8I GCNNGC 2 cut(s) 407, 664
CaiI CAGNNNCTG 1 cut(s) 521
CciI TCATGA 1 cut(s) 1681
CfoI GCGC 3 cut(s) 233, 664, 666
Cfr13I GGNCC 2 cut(s) 116, 689
CseI GACGC 2 cut(s) 14, 299
Csp6I GTAC 1 cut(s) 175
CviAII CATG 5 cut(s) 194, 1348, 1486, 1682, 1914
CviQI GTAC 1 cut(s) 175
DdeI CTNAG 3 cut(s) 51, 259, 1818
DpnI GATC 8 cut(s) 56, 183, 300, 357, 1311, 1501, 1536, 1638
DpnII GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
DraI TTTAAA 1 cut(s) 1773
Eam1104I CTCTTC 3 cut(s) 495, 1371, 1725
EarI CTCTTC 3 cut(s) 495, 1371, 1725
EciI GGCGGA 1 cut(s) 1163
Ecl136II GAGCTC 1 cut(s) 1822
Eco130I CCWWGG 2 cut(s) 371, 685
Eco147I AGGCCT 1 cut(s) 1598
Eco24I GRGCYC 1 cut(s) 1824
Eco32I GATATC 1 cut(s) 40
Eco47I GGWCC 2 cut(s) 116, 689
Eco53kI GAGCTC 1 cut(s) 1822
Eco57I CTGAAG 2 cut(s) 1202, 1745
Eco72I CACGTG 1 cut(s) 1557
Eco88I CYCGRG 1 cut(s) 1577
EcoICRI GAGCTC 1 cut(s) 1822
EcoO109I RGGNCCY 1 cut(s) 116
EcoRI GAATTC 1 cut(s) 701
EcoRII CCWGG 3 cut(s) 634, 747, 1019
EcoRV GATATC 1 cut(s) 40
EcoT14I CCWWGG 2 cut(s) 371, 685
EcoT38I GRGCYC 1 cut(s) 1824
ErhI CCWWGG 2 cut(s) 371, 685
FaeI CATG 5 cut(s) 197, 1351, 1489, 1685, 1917
FatI CATG 5 cut(s) 193, 1347, 1485, 1681, 1913
Fnu4HI GCNGC 2 cut(s) 513, 756
FokI GGATG 6 cut(s) 428, 836, 883, 1163, 1211, 1635
FriOI GRGCYC 1 cut(s) 1824
Fsp4HI GCNGC 2 cut(s) 513, 756
FspBI CTAG 3 cut(s) 288, 788, 875
GlaI GCGC 3 cut(s) 232, 663, 665
GluI GCNGC 2 cut(s) 513, 756
GsaI CCCAGC 2 cut(s) 153, 310
GsuI CTGGAG 1 cut(s) 1042
HaeIII GGCC 3 cut(s) 245, 370, 1598
HapII CCGG 2 cut(s) 201, 314
HgaI GACGC 2 cut(s) 14, 299
HhaI GCGC 3 cut(s) 233, 664, 666
Hin1II CATG 5 cut(s) 197, 1351, 1489, 1685, 1917
Hin6I GCGC 3 cut(s) 231, 662, 664
HinP1I GCGC 3 cut(s) 231, 662, 664
HinfI GANTC 9 cut(s) 32, 47, 434, 680, 914, 1016, 1394, 1402, 1678
HpaII CCGG 2 cut(s) 201, 314
HphI GGTGA 2 cut(s) 1303, 1672
HpyAV CCTTC 7 cut(s) 271, 716, 1243, 1555, 1720, 1832, 1852
HpyCH4III ACNGT 1 cut(s) 733
HpyCH4IV ACGT 3 cut(s) 1042, 1060, 1556
HpyCH4V TGCA 6 cut(s) 389, 476, 484, 620, 928, 1560
HpyF10VI GCNNNNNNNGC 3 cut(s) 293, 518, 788
HpyF3I CTNAG 3 cut(s) 51, 259, 1818
HpySE526I ACGT 3 cut(s) 1042, 1060, 1556
Hsp92II CATG 5 cut(s) 197, 1351, 1489, 1685, 1917
HspAI GCGC 3 cut(s) 231, 662, 664
Kzo9I GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
LguI GCTCTTC 1 cut(s) 1371
LmnI GCTCC 3 cut(s) 322, 1135, 1616
Lsp1109I GCAGC 1 cut(s) 767
LweI GCATC 6 cut(s) 125, 861, 1189, 1309, 1312, 1657
MaeI CTAG 3 cut(s) 288, 788, 875
MaeII ACGT 3 cut(s) 1042, 1060, 1556
MaeIII GTNAC 6 cut(s) 59, 87, 596, 936, 1443, 1762
MalI GATC 8 cut(s) 56, 183, 300, 357, 1311, 1501, 1536, 1638
MboI GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
MfeI CAATTG 2 cut(s) 1121, 1232
MflI RGATCY 3 cut(s) 181, 355, 1636
MhlI GDGCHC 1 cut(s) 1824
MlyI GAGTC 1 cut(s) 428
MmeI TCCRAC 1 cut(s) 972
MroXI GAANNNNTTC 4 cut(s) 455, 551, 705, 1111
MspI CCGG 2 cut(s) 201, 314
MspR9I CCNGG 4 cut(s) 202, 636, 749, 1021
MunI CAATTG 2 cut(s) 1121, 1232
Mva1269I GAATGC 4 cut(s) 565, 856, 930, 1243
MvaI CCWGG 3 cut(s) 636, 749, 1021
MvnI CGCG 1 cut(s) 664
MwoI GCNNNNNNNGC 3 cut(s) 293, 518, 788
NciI CCSGG 1 cut(s) 202
NdeII GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
NlaIII CATG 5 cut(s) 197, 1351, 1489, 1685, 1917
NlaIV GGNNCC 2 cut(s) 117, 318
NmuCI GTSAC 3 cut(s) 59, 596, 936
NspI RCATGY 2 cut(s) 197, 1489
NspV TTCGAA 1 cut(s) 727
PaeR7I CTCGAG 1 cut(s) 1577
PagI TCATGA 1 cut(s) 1681
PauI GCGCGC 1 cut(s) 662
PceI AGGCCT 1 cut(s) 1598
PciI ACATGT 1 cut(s) 1485
PciSI GCTCTTC 1 cut(s) 1371
PctI GAATGC 4 cut(s) 565, 856, 930, 1243
PdmI GAANNNNTTC 4 cut(s) 455, 551, 705, 1111
PfeI GAWTC 8 cut(s) 32, 47, 680, 914, 1016, 1394, 1402, 1678
PflFI GACNNNGTC 2 cut(s) 743, 934
PflMI CCANNNNNTGG 1 cut(s) 416
PfoI TCCNGGA 2 cut(s) 747, 1019
PkrI GCNGC 2 cut(s) 514, 757
PleI GAGTC 1 cut(s) 428
PmaCI CACGTG 1 cut(s) 1557
PmlI CACGTG 1 cut(s) 1557
PpsI GAGTC 1 cut(s) 428
Ppu21I YACGTR 1 cut(s) 1557
PpuMI RGGWCCY 1 cut(s) 116
PscI ACATGT 1 cut(s) 1485
PshBI ATTAAT 1 cut(s) 1466
PsiI TTATAA 1 cut(s) 171
Psp124BI GAGCTC 1 cut(s) 1824
Psp5II RGGWCCY 1 cut(s) 116
Psp6I CCWGG 3 cut(s) 634, 747, 1019
PspCI CACGTG 1 cut(s) 1557
PspFI CCCAGC 2 cut(s) 149, 306
PspGI CCWGG 3 cut(s) 634, 747, 1019
PspN4I GGNNCC 2 cut(s) 117, 318
PspPI GGNCC 2 cut(s) 116, 689
PspPPI RGGWCCY 1 cut(s) 116
PstI CTGCAG 1 cut(s) 478
PstNI CAGNNNCTG 1 cut(s) 521
PsuI RGATCY 3 cut(s) 181, 355, 1636
PsyI GACNNNGTC 2 cut(s) 743, 934
PteI GCGCGC 1 cut(s) 662
RsaI GTAC 1 cut(s) 176
RsaNI GTAC 1 cut(s) 175
SacI GAGCTC 1 cut(s) 1824
SapI GCTCTTC 1 cut(s) 1371
SatI GCNGC 2 cut(s) 513, 756
Sau3AI GATC 8 cut(s) 54, 181, 298, 355, 1309, 1499, 1534, 1636
Sau96I GGNCC 2 cut(s) 116, 689
SchI GAGTC 1 cut(s) 428
ScrFI CCNGG 4 cut(s) 202, 636, 749, 1021
SduI GDGCHC 1 cut(s) 1824
SfaNI GCATC 6 cut(s) 125, 861, 1189, 1309, 1312, 1657
SfcI CTRYAG 2 cut(s) 16, 474
Sfr274I CTCGAG 1 cut(s) 1577
SfuI TTCGAA 1 cut(s) 727
SinI GGWCC 2 cut(s) 116, 689
SlaI CTCGAG 1 cut(s) 1577
SmlI CTYRAG 4 cut(s) 1162, 1382, 1577, 1898
SmoI CTYRAG 4 cut(s) 1162, 1382, 1577, 1898
SseBI AGGCCT 1 cut(s) 1598
SsiI CCGC 4 cut(s) 512, 1133, 1148, 1804
SspI AATATT 2 cut(s) 960, 1888
SspMI CTAG 3 cut(s) 288, 788, 875
SstI GAGCTC 1 cut(s) 1824
StuI AGGCCT 1 cut(s) 1598
StyD4I CCNGG 4 cut(s) 200, 634, 747, 1019
StyI CCWWGG 2 cut(s) 371, 685
TaaI ACNGT 1 cut(s) 733
TaiI ACGT 3 cut(s) 1045, 1063, 1559
TaqI TCGA 5 cut(s) 432, 727, 832, 1498, 1578
TatI WGTACW 1 cut(s) 174
TauI GCSGC 1 cut(s) 515
TfiI GAWTC 8 cut(s) 32, 47, 680, 914, 1016, 1394, 1402, 1678
TscAI CASTG 3 cut(s) 49, 64, 699
TseFI GTSAC 3 cut(s) 59, 596, 936
TseI GCWGC 1 cut(s) 755
Tsp45I GTSAC 3 cut(s) 59, 596, 936
TspDTI ATGAA 8 cut(s) 42, 513, 574, 828, 840, 1310, 1355, 1364
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 3 cut(s) 49, 64, 699
Tth111I GACNNNGTC 2 cut(s) 743, 934
Van91I CCANNNNNTGG 1 cut(s) 416
VpaK11BI GGWCC 2 cut(s) 116, 689
VspI ATTAAT 1 cut(s) 1466
XapI RAATTY 1 cut(s) 701
XceI RCATGY 2 cut(s) 197, 1489
XcmI CCANNNNNNNNNTGG 1 cut(s) 413
XhoI CTCGAG 1 cut(s) 1577
XmnI GAANNNNTTC 4 cut(s) 455, 551, 705, 1111
XspI CTAG 3 cut(s) 288, 788, 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.