Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 3 cut(s) | 30, 45, 333 |
| AcsI | RAATTY | 1 cut(s) | 24 |
| AfaI | GTAC | 1 cut(s) | 241 |
| AgsI | TTSAA | 2 cut(s) | 17, 313 |
| AjiI | CACGTC | 1 cut(s) | 328 |
| Alw26I | GTCTC | 1 cut(s) | 271 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 145, 263 |
| AoxI | GGCC | 3 cut(s) | 30, 45, 333 |
| ApoI | RAATTY | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 1 cut(s) | 51 |
| BalI | TGGCCA | 1 cut(s) | 335 |
| BbsI | GAAGAC | 1 cut(s) | 211 |
| BccI | CCATC | 1 cut(s) | 344 |
| BcoDI | GTCTC | 1 cut(s) | 271 |
| BfaI | CTAG | 1 cut(s) | 101 |
| BmgBI | CACGTC | 1 cut(s) | 328 |
| BmiI | GGNNCC | 2 cut(s) | 98, 112 |
| BpiI | GAAGAC | 1 cut(s) | 211 |
| BpuEI | CTTGAG | 1 cut(s) | 253 |
| BsaJI | CCNNGG | 1 cut(s) | 216 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 287, 317 |
| BseDI | CCNNGG | 1 cut(s) | 216 |
| BseGI | GGATG | 1 cut(s) | 336 |
| BshFI | GGCC | 3 cut(s) | 32, 47, 335 |
| BsiSI | CCGG | 1 cut(s) | 29 |
| BsmAI | GTCTC | 1 cut(s) | 271 |
| BsmI | GAATGC | 1 cut(s) | 273 |
| BsnI | GGCC | 3 cut(s) | 32, 47, 335 |
| BspANI | GGCC | 3 cut(s) | 32, 47, 335 |
| BspLI | GGNNCC | 2 cut(s) | 98, 112 |
| BssECI | CCNNGG | 1 cut(s) | 216 |
| BstC8I | GCNNGC | 1 cut(s) | 323 |
| BstF5I | GGATG | 1 cut(s) | 336 |
| BstMAI | GTCTC | 1 cut(s) | 271 |
| BstNSI | RCATGY | 2 cut(s) | 290, 325 |
| BstV2I | GAAGAC | 1 cut(s) | 211 |
| BsuRI | GGCC | 3 cut(s) | 32, 47, 335 |
| BtrI | CACGTC | 1 cut(s) | 328 |
| BtsCI | GGATG | 1 cut(s) | 336 |
| BtsI | GCAGTG | 2 cut(s) | 6, 264 |
| BtsIMutI | CAGTG | 2 cut(s) | 6, 264 |
| Cac8I | GCNNGC | 1 cut(s) | 323 |
| CaiI | CAGNNNCTG | 2 cut(s) | 145, 263 |
| CseI | GACGC | 1 cut(s) | 216 |
| Csp6I | GTAC | 1 cut(s) | 240 |
| CviAII | CATG | 4 cut(s) | 49, 167, 287, 322 |
| CviJI | RGCY | 7 cut(s) | 32, 47, 97, 113, 149, 263, 335 |
| CviKI_1 | RGCY | 7 cut(s) | 32, 47, 97, 113, 149, 263, 335 |
| CviQI | GTAC | 1 cut(s) | 240 |
| EaeI | YGGCCR | 3 cut(s) | 30, 45, 333 |
| EcoRI | GAATTC | 1 cut(s) | 24 |
| FaeI | CATG | 4 cut(s) | 52, 170, 290, 325 |
| FaiI | YATR | 4 cut(s) | 50, 168, 288, 323 |
| FatI | CATG | 4 cut(s) | 48, 166, 286, 321 |
| FokI | GGATG | 1 cut(s) | 323 |
| FspBI | CTAG | 1 cut(s) | 101 |
| HaeIII | GGCC | 3 cut(s) | 32, 47, 335 |
| HapII | CCGG | 1 cut(s) | 29 |
| HgaI | GACGC | 1 cut(s) | 216 |
| Hin1II | CATG | 4 cut(s) | 52, 170, 290, 325 |
| HinfI | GANTC | 2 cut(s) | 39, 142 |
| HpaII | CCGG | 1 cut(s) | 29 |
| HphI | GGTGA | 1 cut(s) | 51 |
| Hpy188I | TCNGA | 2 cut(s) | 141, 217 |
| Hpy188III | TCNNGA | 1 cut(s) | 131 |
| HpyAV | CCTTC | 2 cut(s) | 11, 170 |
| HpyCH4IV | ACGT | 1 cut(s) | 327 |
| HpyCH4V | TGCA | 4 cut(s) | 119, 286, 325, 343 |
| HpySE526I | ACGT | 1 cut(s) | 327 |
| Hsp92II | CATG | 4 cut(s) | 52, 170, 290, 325 |
| LmnI | GCTCC | 2 cut(s) | 102, 110 |
| LpnPI | CCDG | 4 cut(s) | 42, 93, 131, 144 |
| MaeI | CTAG | 1 cut(s) | 101 |
| MaeII | ACGT | 1 cut(s) | 327 |
| MaeIII | GTNAC | 1 cut(s) | 279 |
| MboII | GAAGA | 2 cut(s) | 48, 216 |
| MlsI | TGGCCA | 1 cut(s) | 335 |
| MluCI | AATT | 2 cut(s) | 24, 63 |
| MluNI | TGGCCA | 1 cut(s) | 335 |
| MlyI | GAGTC | 1 cut(s) | 33 |
| MnlI | CCTC | 2 cut(s) | 179, 211 |
| Mox20I | TGGCCA | 1 cut(s) | 335 |
| MscI | TGGCCA | 1 cut(s) | 335 |
| MseI | TTAA | 1 cut(s) | 72 |
| MslI | CAYNNNNRTG | 1 cut(s) | 171 |
| Msp20I | TGGCCA | 1 cut(s) | 335 |
| MspI | CCGG | 1 cut(s) | 29 |
| Mva1269I | GAATGC | 1 cut(s) | 273 |
| NlaIII | CATG | 4 cut(s) | 52, 170, 290, 325 |
| NlaIV | GGNNCC | 2 cut(s) | 98, 112 |
| NmeAIII | GCCGAG | 1 cut(s) | 23 |
| NspI | RCATGY | 2 cut(s) | 290, 325 |
| PaeI | GCATGC | 1 cut(s) | 325 |
| PctI | GAATGC | 1 cut(s) | 273 |
| PfeI | GAWTC | 1 cut(s) | 142 |
| PleI | GAGTC | 1 cut(s) | 33 |
| PpsI | GAGTC | 1 cut(s) | 33 |
| PspN4I | GGNNCC | 2 cut(s) | 98, 112 |
| PstNI | CAGNNNCTG | 2 cut(s) | 145, 263 |
| RsaI | GTAC | 1 cut(s) | 241 |
| RsaNI | GTAC | 1 cut(s) | 240 |
| RseI | CAYNNNNRTG | 1 cut(s) | 171 |
| SaqAI | TTAA | 1 cut(s) | 72 |
| SchI | GAGTC | 1 cut(s) | 33 |
| SetI | ASST | 2 cut(s) | 190, 330 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 171 |
| SmlI | CTYRAG | 1 cut(s) | 268 |
| SmoI | CTYRAG | 1 cut(s) | 268 |
| SphI | GCATGC | 1 cut(s) | 325 |
| Sse9I | AATT | 2 cut(s) | 24, 63 |
| SspMI | CTAG | 1 cut(s) | 101 |
| TaiI | ACGT | 1 cut(s) | 330 |
| TaqI | TCGA | 1 cut(s) | 300 |
| TasI | AATT | 2 cut(s) | 24, 63 |
| TfiI | GAWTC | 1 cut(s) | 142 |
| Tru1I | TTAA | 1 cut(s) | 72 |
| Tru9I | TTAA | 1 cut(s) | 72 |
| TscAI | CASTG | 2 cut(s) | 13, 264 |
| TspDTI | ATGAA | 2 cut(s) | 17, 189 |
| TspGWI | ACGGA | 1 cut(s) | 216 |
| TspRI | CASTG | 2 cut(s) | 13, 264 |
| XapI | RAATTY | 1 cut(s) | 24 |
| XceI | RCATGY | 2 cut(s) | 290, 325 |
| XspI | CTAG | 1 cut(s) | 101 |