gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 369, 414 |
| AcuI | CTGAAG | 1 cut(s) | 434 |
| AfaI | GTAC | 1 cut(s) | 301 |
| AgsI | TTSAA | 3 cut(s) | 56, 188, 434 |
| AluBI | AGCT | 1 cut(s) | 136 |
| AluI | AGCT | 1 cut(s) | 136 |
| AlwI | GGATC | 2 cut(s) | 369, 414 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 457 |
| ApeKI | GCWGC | 1 cut(s) | 343 |
| AseI | ATTAAT | 1 cut(s) | 264 |
| AspLEI | GCGC | 1 cut(s) | 165 |
| BbvI | GCAGC | 1 cut(s) | 330 |
| BccI | CCATC | 2 cut(s) | 209, 386 |
| BfaI | CTAG | 2 cut(s) | 417, 472 |
| BfmI | CTRYAG | 2 cut(s) | 255, 458 |
| BfoI | RGCGCY | 1 cut(s) | 166 |
| BisI | GCNGC | 1 cut(s) | 344 |
| BlpI | GCTNAGC | 1 cut(s) | 137 |
| BlsI | GCNGC | 1 cut(s) | 345 |
| BmiI | GGNNCC | 1 cut(s) | 469 |
| BmsI | GCATC | 1 cut(s) | 451 |
| BpmI | CTGGAG | 1 cut(s) | 413 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 137 |
| BpuEI | CTTGAG | 1 cut(s) | 422 |
| BsaBI | GATNNNNATC | 1 cut(s) | 264 |
| Bse1I | ACTGG | 1 cut(s) | 179 |
| Bse8I | GATNNNNATC | 1 cut(s) | 264 |
| BseJI | GATNNNNATC | 1 cut(s) | 264 |
| BseMII | CTCAG | 1 cut(s) | 151 |
| BseNI | ACTGG | 1 cut(s) | 179 |
| BseXI | GCAGC | 1 cut(s) | 330 |
| BseYI | CCCAGC | 1 cut(s) | 232 |
| BsiSI | CCGG | 1 cut(s) | 269 |
| Bsp143I | GATC | 3 cut(s) | 295, 374, 419 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 137 |
| BspCNI | CTCAG | 1 cut(s) | 150 |
| BspLI | GGNNCC | 1 cut(s) | 469 |
| BspMAI | CTGCAG | 1 cut(s) | 462 |
| BspPI | GGATC | 2 cut(s) | 369, 414 |
| BsrI | ACTGG | 1 cut(s) | 179 |
| BssMI | GATC | 3 cut(s) | 295, 374, 419 |
| BstDEI | CTNAG | 1 cut(s) | 137 |
| BstH2I | RGCGCY | 1 cut(s) | 166 |
| BstHHI | GCGC | 1 cut(s) | 165 |
| BstKTI | GATC | 3 cut(s) | 298, 377, 422 |
| BstMBI | GATC | 3 cut(s) | 295, 374, 419 |
| BstSFI | CTRYAG | 2 cut(s) | 255, 458 |
| BstV1I | GCAGC | 1 cut(s) | 330 |
| BstX2I | RGATCY | 1 cut(s) | 419 |
| BstYI | RGATCY | 1 cut(s) | 419 |
| BtsI | GCAGTG | 3 cut(s) | 72, 318, 455 |
| BtsIMutI | CAGTG | 3 cut(s) | 72, 318, 455 |
| CaiI | CAGNNNCTG | 1 cut(s) | 457 |
| CfoI | GCGC | 1 cut(s) | 165 |
| CseI | GACGC | 1 cut(s) | 386 |
| Csp6I | GTAC | 1 cut(s) | 300 |
| CviAII | CATG | 3 cut(s) | 238, 277, 425 |
| CviJI | RGCY | 4 cut(s) | 116, 136, 236, 316 |
| CviKI_1 | RGCY | 4 cut(s) | 116, 136, 236, 316 |
| CviQI | GTAC | 1 cut(s) | 300 |
| DdeI | CTNAG | 1 cut(s) | 137 |
| DpnI | GATC | 3 cut(s) | 297, 376, 421 |
| DpnII | GATC | 3 cut(s) | 295, 374, 419 |
| Eco57I | CTGAAG | 1 cut(s) | 434 |
| FaeI | CATG | 3 cut(s) | 241, 280, 428 |
| FaiI | YATR | 8 cut(s) | 113, 160, 239, 274, 278, 311, 313, 426 |
| FatI | CATG | 3 cut(s) | 237, 276, 424 |
| FauNDI | CATATG | 1 cut(s) | 311 |
| Fnu4HI | GCNGC | 1 cut(s) | 344 |
| Fsp4HI | GCNGC | 1 cut(s) | 344 |
| FspBI | CTAG | 2 cut(s) | 417, 472 |
| GlaI | GCGC | 1 cut(s) | 164 |
| GluI | GCNGC | 1 cut(s) | 344 |
| GsaI | CCCAGC | 1 cut(s) | 236 |
| GsuI | CTGGAG | 1 cut(s) | 413 |
| HaeII | RGCGCY | 1 cut(s) | 166 |
| HapII | CCGG | 1 cut(s) | 269 |
| HgaI | GACGC | 1 cut(s) | 386 |
| HhaI | GCGC | 1 cut(s) | 165 |
| Hin1II | CATG | 3 cut(s) | 241, 280, 428 |
| Hin6I | GCGC | 1 cut(s) | 163 |
| HinP1I | GCGC | 1 cut(s) | 163 |
| HinfI | GANTC | 2 cut(s) | 224, 335 |
| HpaII | CCGG | 1 cut(s) | 269 |
| Hpy188I | TCNGA | 1 cut(s) | 453 |
| Hpy188III | TCNNGA | 1 cut(s) | 392 |
| Hpy99I | CGWCG | 1 cut(s) | 402 |
| HpyAV | CCTTC | 2 cut(s) | 194, 440 |
| HpyCH4V | TGCA | 1 cut(s) | 460 |
| HpyF3I | CTNAG | 1 cut(s) | 137 |
| Hsp92II | CATG | 3 cut(s) | 241, 280, 428 |
| HspAI | GCGC | 1 cut(s) | 163 |
| Kzo9I | GATC | 3 cut(s) | 295, 374, 419 |
| LmnI | GCTCC | 1 cut(s) | 394 |
| LpnPI | CCDG | 6 cut(s) | 78, 192, 246, 282, 316, 377 |
| Lsp1109I | GCAGC | 1 cut(s) | 330 |
| LweI | GCATC | 1 cut(s) | 451 |
| MaeI | CTAG | 2 cut(s) | 417, 472 |
| MaeIII | GTNAC | 1 cut(s) | 385 |
| MalI | GATC | 3 cut(s) | 297, 376, 421 |
| MboI | GATC | 3 cut(s) | 295, 374, 419 |
| MflI | RGATCY | 1 cut(s) | 419 |
| MluCI | AATT | 2 cut(s) | 210, 250 |
| MlyI | GAGTC | 2 cut(s) | 218, 329 |
| MnlI | CCTC | 1 cut(s) | 103 |
| MseI | TTAA | 1 cut(s) | 264 |
| MspI | CCGG | 1 cut(s) | 269 |
| NdeI | CATATG | 1 cut(s) | 311 |
| NdeII | GATC | 3 cut(s) | 295, 374, 419 |
| NlaIII | CATG | 3 cut(s) | 241, 280, 428 |
| NlaIV | GGNNCC | 1 cut(s) | 469 |
| NmeAIII | GCCGAG | 1 cut(s) | 309 |
| NmuCI | GTSAC | 1 cut(s) | 385 |
| PkrI | GCNGC | 1 cut(s) | 345 |
| PleI | GAGTC | 2 cut(s) | 218, 329 |
| PpsI | GAGTC | 2 cut(s) | 218, 329 |
| PshBI | ATTAAT | 1 cut(s) | 264 |
| PspFI | CCCAGC | 1 cut(s) | 232 |
| PspN4I | GGNNCC | 1 cut(s) | 469 |
| PstI | CTGCAG | 1 cut(s) | 462 |
| PstNI | CAGNNNCTG | 1 cut(s) | 457 |
| PsuI | RGATCY | 1 cut(s) | 419 |
| RsaI | GTAC | 1 cut(s) | 301 |
| RsaNI | GTAC | 1 cut(s) | 300 |
| SaqAI | TTAA | 1 cut(s) | 264 |
| SatI | GCNGC | 1 cut(s) | 344 |
| Sau3AI | GATC | 3 cut(s) | 295, 374, 419 |
| SchI | GAGTC | 2 cut(s) | 218, 329 |
| SetI | ASST | 3 cut(s) | 138, 305, 473 |
| SfaNI | GCATC | 1 cut(s) | 451 |
| SfcI | CTRYAG | 2 cut(s) | 255, 458 |
| SmlI | CTYRAG | 1 cut(s) | 437 |
| SmoI | CTYRAG | 1 cut(s) | 437 |
| Sse9I | AATT | 2 cut(s) | 210, 250 |
| SspMI | CTAG | 2 cut(s) | 417, 472 |
| TasI | AATT | 2 cut(s) | 210, 250 |
| Tru1I | TTAA | 1 cut(s) | 264 |
| Tru9I | TTAA | 1 cut(s) | 264 |
| TscAI | CASTG | 3 cut(s) | 79, 325, 462 |
| TseFI | GTSAC | 1 cut(s) | 385 |
| TseI | GCWGC | 1 cut(s) | 343 |
| Tsp45I | GTSAC | 1 cut(s) | 385 |
| TspRI | CASTG | 3 cut(s) | 79, 325, 462 |
| VspI | ATTAAT | 1 cut(s) | 264 |
| XspI | CTAG | 2 cut(s) | 417, 472 |