lipid metabolic process
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 643 |
| Acc36I | ACCTGC | 2 cut(s) | 202, 643 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 817 |
| AccBSI | CCGCTC | 1 cut(s) | 674 |
| AccII | CGCG | 2 cut(s) | 617, 827 |
| AciI | CCGC | 6 cut(s) | 294, 569, 587, 615, 672, 827 |
| AclWI | GGATC | 2 cut(s) | 585, 661 |
| AcoI | YGGCCR | 1 cut(s) | 399 |
| AcsI | RAATTY | 4 cut(s) | 13, 496, 642, 690 |
| AfaI | GTAC | 2 cut(s) | 120, 739 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 123, 817 |
| AgsI | TTSAA | 4 cut(s) | 137, 320, 329, 597 |
| AleI | CACNNNNGTG | 1 cut(s) | 653 |
| AluBI | AGCT | 2 cut(s) | 699, 835 |
| AluI | AGCT | 2 cut(s) | 699, 835 |
| Alw21I | GWGCWC | 1 cut(s) | 532 |
| Alw26I | GTCTC | 2 cut(s) | 314, 542 |
| AlwI | GGATC | 2 cut(s) | 585, 661 |
| AoxI | GGCC | 4 cut(s) | 399, 451, 457, 772 |
| ApeKI | GCWGC | 6 cut(s) | 699, 723, 726, 729, 753, 796 |
| ApoI | RAATTY | 4 cut(s) | 13, 496, 642, 690 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 230 |
| AspLEI | GCGC | 1 cut(s) | 116 |
| AspS9I | GGNCC | 2 cut(s) | 458, 772 |
| AsuHPI | GGTGA | 6 cut(s) | 43, 80, 163, 256, 508, 624 |
| BalI | TGGCCA | 1 cut(s) | 401 |
| Bbv12I | GWGCWC | 1 cut(s) | 532 |
| BbvI | GCAGC | 6 cut(s) | 686, 735, 738, 741, 765, 783 |
| BccI | CCATC | 4 cut(s) | 37, 173, 410, 819 |
| BceAI | ACGGC | 1 cut(s) | 101 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 509, 543 |
| BciVI | GTATCC | 1 cut(s) | 545 |
| BcoDI | GTCTC | 2 cut(s) | 314, 542 |
| BfaI | CTAG | 3 cut(s) | 180, 306, 395 |
| BfmI | CTRYAG | 1 cut(s) | 721 |
| BfuAI | ACCTGC | 2 cut(s) | 202, 643 |
| BfuI | GTATCC | 1 cut(s) | 545 |
| BisI | GCNGC | 9 cut(s) | 294, 615, 700, 724, 727, 730, 754, 797, 828 |
| BlpI | GCTNAGC | 1 cut(s) | 831 |
| BlsI | GCNGC | 9 cut(s) | 295, 616, 701, 725, 728, 731, 755, 798, 829 |
| BmgT120I | GGNCC | 2 cut(s) | 458, 772 |
| BmiI | GGNNCC | 2 cut(s) | 142, 460 |
| BmsI | GCATC | 2 cut(s) | 17, 423 |
| BoxI | GACNNNNGTC | 1 cut(s) | 623 |
| BpmI | CTGGAG | 1 cut(s) | 660 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 831 |
| BsaBI | GATNNNNATC | 1 cut(s) | 360 |
| BsaI | GGTCTC | 1 cut(s) | 542 |
| BsaJI | CCNNGG | 1 cut(s) | 454 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 10, 40, 589, 619 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 123, 817 |
| Bse1I | ACTGG | 1 cut(s) | 297 |
| Bse8I | GATNNNNATC | 1 cut(s) | 360 |
| BseDI | CCNNGG | 1 cut(s) | 454 |
| BseGI | GGATG | 2 cut(s) | 165, 561 |
| BseJI | GATNNNNATC | 1 cut(s) | 360 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 123, 817 |
| BseNI | ACTGG | 1 cut(s) | 297 |
| BseRI | GAGGAG | 1 cut(s) | 597 |
| BseXI | GCAGC | 6 cut(s) | 686, 735, 738, 741, 765, 783 |
| BsgI | GTGCAG | 1 cut(s) | 201 |
| Bsh1236I | CGCG | 2 cut(s) | 617, 827 |
| BshFI | GGCC | 4 cut(s) | 401, 453, 459, 774 |
| BsiHKAI | GWGCWC | 1 cut(s) | 532 |
| BslFI | GGGAC | 1 cut(s) | 788 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 123, 817 |
| BsmAI | GTCTC | 2 cut(s) | 314, 542 |
| BsmFI | GGGAC | 1 cut(s) | 788 |
| BsnI | GGCC | 4 cut(s) | 401, 453, 459, 774 |
| Bso31I | GGTCTC | 1 cut(s) | 542 |
| Bsp1286I | GDGCHC | 1 cut(s) | 532 |
| Bsp143I | GATC | 2 cut(s) | 577, 666 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 831 |
| BspACI | CCGC | 6 cut(s) | 294, 569, 587, 615, 672, 827 |
| BspANI | GGCC | 4 cut(s) | 401, 453, 459, 774 |
| BspFNI | CGCG | 2 cut(s) | 617, 827 |
| BspLI | GGNNCC | 2 cut(s) | 142, 460 |
| BspMAI | CTGCAG | 1 cut(s) | 725 |
| BspMI | ACCTGC | 2 cut(s) | 202, 643 |
| BspPI | GGATC | 2 cut(s) | 585, 661 |
| BspTNI | GGTCTC | 1 cut(s) | 542 |
| BsrBI | CCGCTC | 1 cut(s) | 674 |
| BsrI | ACTGG | 1 cut(s) | 297 |
| BssECI | CCNNGG | 1 cut(s) | 454 |
| BssMI | GATC | 2 cut(s) | 577, 666 |
| BssT1I | CCWWGG | 1 cut(s) | 454 |
| Bst6I | CTCTTC | 2 cut(s) | 475, 510 |
| BstC8I | GCNNGC | 2 cut(s) | 438, 704 |
| BstDEI | CTNAG | 3 cut(s) | 279, 791, 831 |
| BstF5I | GGATG | 2 cut(s) | 165, 561 |
| BstFNI | CGCG | 2 cut(s) | 617, 827 |
| BstHHI | GCGC | 1 cut(s) | 116 |
| BstKTI | GATC | 2 cut(s) | 580, 669 |
| BstMAI | GTCTC | 2 cut(s) | 314, 542 |
| BstMBI | GATC | 2 cut(s) | 577, 666 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 299, 442, 729, 753 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 623 |
| BstSFI | CTRYAG | 1 cut(s) | 721 |
| BstUI | CGCG | 2 cut(s) | 617, 827 |
| BstV1I | GCAGC | 6 cut(s) | 686, 735, 738, 741, 765, 783 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 655 |
| BsuI | GTATCC | 1 cut(s) | 545 |
| BsuRI | GGCC | 4 cut(s) | 401, 453, 459, 774 |
| BtsCI | GGATG | 2 cut(s) | 165, 561 |
| BtsI | GCAGTG | 1 cut(s) | 39 |
| BtsIMutI | CAGTG | 2 cut(s) | 39, 304 |
| BveI | ACCTGC | 2 cut(s) | 202, 643 |
| Cac8I | GCNNGC | 2 cut(s) | 438, 704 |
| CfoI | GCGC | 1 cut(s) | 116 |
| Cfr13I | GGNCC | 2 cut(s) | 458, 772 |
| Csp6I | GTAC | 2 cut(s) | 119, 738 |
| CviAII | CATG | 2 cut(s) | 449, 574 |
| CviQI | GTAC | 2 cut(s) | 119, 738 |
| DdeI | CTNAG | 3 cut(s) | 279, 791, 831 |
| DpnI | GATC | 2 cut(s) | 579, 668 |
| DpnII | GATC | 2 cut(s) | 577, 666 |
| EaeI | YGGCCR | 1 cut(s) | 399 |
| Eam1104I | CTCTTC | 2 cut(s) | 475, 510 |
| EarI | CTCTTC | 2 cut(s) | 475, 510 |
| Eco130I | CCWWGG | 1 cut(s) | 454 |
| Eco31I | GGTCTC | 1 cut(s) | 542 |
| Eco32I | GATATC | 1 cut(s) | 187 |
| EcoRV | GATATC | 1 cut(s) | 187 |
| EcoT14I | CCWWGG | 1 cut(s) | 454 |
| ErhI | CCWWGG | 1 cut(s) | 454 |
| FaeI | CATG | 2 cut(s) | 452, 577 |
| FaiI | YATR | 7 cut(s) | 132, 222, 450, 473, 575, 736, 766 |
| FaqI | GGGAC | 1 cut(s) | 788 |
| FatI | CATG | 2 cut(s) | 448, 573 |
| FauI | CCCGC | 1 cut(s) | 679 |
| Fnu4HI | GCNGC | 9 cut(s) | 294, 615, 700, 724, 727, 730, 754, 797, 828 |
| FokI | GGATG | 2 cut(s) | 152, 548 |
| Fsp4HI | GCNGC | 9 cut(s) | 294, 615, 700, 724, 727, 730, 754, 797, 828 |
| FspBI | CTAG | 3 cut(s) | 180, 306, 395 |
| GlaI | GCGC | 1 cut(s) | 115 |
| GluI | GCNGC | 9 cut(s) | 294, 615, 700, 724, 727, 730, 754, 797, 828 |
| GsuI | CTGGAG | 1 cut(s) | 660 |
| HaeIII | GGCC | 4 cut(s) | 401, 453, 459, 774 |
| HhaI | GCGC | 1 cut(s) | 116 |
| Hin1II | CATG | 2 cut(s) | 452, 577 |
| Hin6I | GCGC | 1 cut(s) | 114 |
| HinP1I | GCGC | 1 cut(s) | 114 |
| HincII | GTYRAC | 1 cut(s) | 60 |
| HindII | GTYRAC | 1 cut(s) | 60 |
| HinfI | GANTC | 4 cut(s) | 283, 389, 490, 558 |
| HpaI | GTTAAC | 1 cut(s) | 60 |
| HphI | GGTGA | 6 cut(s) | 43, 80, 163, 256, 508, 624 |
| Hpy166II | GTNNAC | 2 cut(s) | 60, 234 |
| Hpy188I | TCNGA | 3 cut(s) | 421, 479, 489 |
| Hpy188III | TCNNGA | 4 cut(s) | 149, 326, 547, 677 |
| Hpy8I | GTNNAC | 2 cut(s) | 60, 234 |
| HpyAV | CCTTC | 2 cut(s) | 131, 269 |
| HpyCH4V | TGCA | 7 cut(s) | 8, 197, 218, 386, 440, 702, 723 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 299, 442, 729, 753 |
| HpyF3I | CTNAG | 3 cut(s) | 279, 791, 831 |
| Hsp92II | CATG | 2 cut(s) | 452, 577 |
| HspAI | GCGC | 1 cut(s) | 114 |
| KspAI | GTTAAC | 1 cut(s) | 60 |
| Kzo9I | GATC | 2 cut(s) | 577, 666 |
| LmnI | GCTCC | 1 cut(s) | 679 |
| Lsp1109I | GCAGC | 6 cut(s) | 686, 735, 738, 741, 765, 783 |
| LweI | GCATC | 2 cut(s) | 17, 423 |
| MaeI | CTAG | 3 cut(s) | 180, 306, 395 |
| MalI | GATC | 2 cut(s) | 579, 668 |
| MbiI | CCGCTC | 1 cut(s) | 674 |
| MboI | GATC | 2 cut(s) | 577, 666 |
| MboII | GAAGA | 2 cut(s) | 492, 497 |
| MfeI | CAATTG | 4 cut(s) | 109, 351, 381, 621 |
| MhlI | GDGCHC | 1 cut(s) | 532 |
| MlsI | TGGCCA | 1 cut(s) | 401 |
| MluNI | TGGCCA | 1 cut(s) | 401 |
| MlyI | GAGTC | 4 cut(s) | 292, 383, 484, 552 |
| MmeI | TCCRAC | 1 cut(s) | 214 |
| Mox20I | TGGCCA | 1 cut(s) | 401 |
| MroXI | GAANNNNTTC | 1 cut(s) | 230 |
| MscI | TGGCCA | 1 cut(s) | 401 |
| MseI | TTAA | 3 cut(s) | 59, 77, 500 |
| MslI | CAYNNNNRTG | 1 cut(s) | 653 |
| Msp20I | TGGCCA | 1 cut(s) | 401 |
| MspA1I | CMGCKG | 1 cut(s) | 699 |
| MunI | CAATTG | 4 cut(s) | 109, 351, 381, 621 |
| MvnI | CGCG | 2 cut(s) | 617, 827 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 299, 442, 729, 753 |
| NdeII | GATC | 2 cut(s) | 577, 666 |
| NlaIII | CATG | 2 cut(s) | 452, 577 |
| NlaIV | GGNNCC | 2 cut(s) | 142, 460 |
| OliI | CACNNNNGTG | 1 cut(s) | 653 |
| PaqCI | CACCTGC | 1 cut(s) | 643 |
| PdmI | GAANNNNTTC | 1 cut(s) | 230 |
| PflFI | GACNNNGTC | 1 cut(s) | 683 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 817 |
| PkrI | GCNGC | 9 cut(s) | 295, 616, 701, 725, 728, 731, 755, 798, 829 |
| PleI | GAGTC | 4 cut(s) | 291, 383, 484, 552 |
| PpsI | GAGTC | 4 cut(s) | 291, 383, 484, 552 |
| PshAI | GACNNNNGTC | 1 cut(s) | 623 |
| PspN4I | GGNNCC | 2 cut(s) | 142, 460 |
| PspPI | GGNCC | 2 cut(s) | 458, 772 |
| PstI | CTGCAG | 1 cut(s) | 725 |
| PsyI | GACNNNGTC | 1 cut(s) | 683 |
| PvuII | CAGCTG | 1 cut(s) | 699 |
| RsaI | GTAC | 2 cut(s) | 120, 739 |
| RsaNI | GTAC | 2 cut(s) | 119, 738 |
| RseI | CAYNNNNRTG | 1 cut(s) | 653 |
| SaqAI | TTAA | 3 cut(s) | 59, 77, 500 |
| SatI | GCNGC | 9 cut(s) | 294, 615, 700, 724, 727, 730, 754, 797, 828 |
| Sau3AI | GATC | 2 cut(s) | 577, 666 |
| Sau96I | GGNCC | 2 cut(s) | 458, 772 |
| SchI | GAGTC | 4 cut(s) | 292, 383, 484, 552 |
| SduI | GDGCHC | 1 cut(s) | 532 |
| SfaNI | GCATC | 2 cut(s) | 17, 423 |
| SfcI | CTRYAG | 1 cut(s) | 721 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 653 |
| SsiI | CCGC | 6 cut(s) | 294, 569, 587, 615, 672, 827 |
| SspMI | CTAG | 3 cut(s) | 180, 306, 395 |
| StyI | CCWWGG | 1 cut(s) | 454 |
| TaqI | TCGA | 2 cut(s) | 546, 687 |
| TauI | GCSGC | 3 cut(s) | 296, 617, 830 |
| Tru1I | TTAA | 3 cut(s) | 59, 77, 500 |
| Tru9I | TTAA | 3 cut(s) | 59, 77, 500 |
| TscAI | CASTG | 2 cut(s) | 46, 304 |
| TseI | GCWGC | 6 cut(s) | 699, 723, 726, 729, 753, 796 |
| TspDTI | ATGAA | 1 cut(s) | 437 |
| TspGWI | ACGGA | 1 cut(s) | 515 |
| TspRI | CASTG | 2 cut(s) | 46, 304 |
| Tth111I | GACNNNGTC | 1 cut(s) | 683 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 817 |
| XapI | RAATTY | 4 cut(s) | 13, 496, 642, 690 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 635 |
| XmnI | GAANNNNTTC | 1 cut(s) | 230 |
| XspI | CTAG | 3 cut(s) | 180, 306, 395 |