Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 40 |
| Acc65I | GGTACC | 1 cut(s) | 365 |
| AccB1I | GGYRCC | 1 cut(s) | 365 |
| AccII | CGCG | 1 cut(s) | 85 |
| AciI | CCGC | 1 cut(s) | 72 |
| AclWI | GGATC | 1 cut(s) | 15 |
| AcsI | RAATTY | 2 cut(s) | 280, 418 |
| AfaI | GTAC | 2 cut(s) | 367, 440 |
| AflIII | ACRYGT | 2 cut(s) | 37, 397 |
| AgsI | TTSAA | 2 cut(s) | 416, 488 |
| AjiI | CACGTC | 1 cut(s) | 68 |
| AjnI | CCWGG | 1 cut(s) | 368 |
| AlwI | GGATC | 1 cut(s) | 15 |
| ApoI | RAATTY | 2 cut(s) | 280, 418 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 106 |
| Asp718I | GGTACC | 1 cut(s) | 365 |
| AspLEI | GCGC | 2 cut(s) | 174, 259 |
| AsuC2I | CCSGG | 1 cut(s) | 246 |
| AsuHPI | GGTGA | 3 cut(s) | 106, 203, 224 |
| BanI | GGYRCC | 1 cut(s) | 365 |
| BbsI | GAAGAC | 2 cut(s) | 99, 476 |
| BciT130I | CCWGG | 1 cut(s) | 370 |
| BcnI | CCSGG | 1 cut(s) | 246 |
| BfaI | CTAG | 1 cut(s) | 60 |
| BfuAI | ACCTGC | 1 cut(s) | 40 |
| Bme1390I | CCNGG | 2 cut(s) | 246, 370 |
| BmgBI | CACGTC | 1 cut(s) | 68 |
| BmiI | GGNNCC | 2 cut(s) | 367, 478 |
| BmrFI | CCNGG | 2 cut(s) | 246, 370 |
| BpiI | GAAGAC | 2 cut(s) | 99, 476 |
| BpuMI | CCSGG | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 2 cut(s) | 21, 497 |
| Bse1I | ACTGG | 2 cut(s) | 97, 480 |
| BseBI | CCWGG | 1 cut(s) | 370 |
| BseDI | CCNNGG | 2 cut(s) | 21, 497 |
| BseGI | GGATG | 2 cut(s) | 250, 282 |
| BseNI | ACTGG | 2 cut(s) | 97, 480 |
| BseRI | GAGGAG | 1 cut(s) | 322 |
| BsgI | GTGCAG | 1 cut(s) | 18 |
| Bsh1236I | CGCG | 1 cut(s) | 85 |
| Bsh1285I | CGRYCG | 1 cut(s) | 83 |
| BshNI | GGYRCC | 1 cut(s) | 365 |
| BsiEI | CGRYCG | 1 cut(s) | 83 |
| BsiSI | CCGG | 1 cut(s) | 246 |
| BslFI | GGGAC | 1 cut(s) | 103 |
| BsmFI | GGGAC | 1 cut(s) | 103 |
| BsmI | GAATGC | 1 cut(s) | 397 |
| Bsp143I | GATC | 2 cut(s) | 7, 80 |
| BspACI | CCGC | 1 cut(s) | 72 |
| BspFNI | CGCG | 1 cut(s) | 85 |
| BspLI | GGNNCC | 2 cut(s) | 367, 478 |
| BspMI | ACCTGC | 1 cut(s) | 40 |
| BspPI | GGATC | 1 cut(s) | 15 |
| BspT107I | GGYRCC | 1 cut(s) | 365 |
| BsrI | ACTGG | 2 cut(s) | 97, 480 |
| BssECI | CCNNGG | 2 cut(s) | 21, 497 |
| BssMI | GATC | 2 cut(s) | 7, 80 |
| BssT1I | CCWWGG | 2 cut(s) | 21, 497 |
| Bst2UI | CCWGG | 1 cut(s) | 370 |
| Bst4CI | ACNGT | 1 cut(s) | 476 |
| Bst6I | CTCTTC | 1 cut(s) | 91 |
| BstF5I | GGATG | 2 cut(s) | 250, 282 |
| BstFNI | CGCG | 1 cut(s) | 85 |
| BstHHI | GCGC | 2 cut(s) | 174, 259 |
| BstKTI | GATC | 2 cut(s) | 10, 83 |
| BstMBI | GATC | 2 cut(s) | 7, 80 |
| BstMCI | CGRYCG | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 32, 53, 178 |
| BstNI | CCWGG | 1 cut(s) | 370 |
| BstNSI | RCATGY | 2 cut(s) | 41, 401 |
| BstSCI | CCNGG | 2 cut(s) | 244, 368 |
| BstUI | CGCG | 1 cut(s) | 85 |
| BstV2I | GAAGAC | 2 cut(s) | 99, 476 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 236 |
| BtrI | CACGTC | 1 cut(s) | 68 |
| BtsCI | GGATG | 2 cut(s) | 250, 282 |
| BveI | ACCTGC | 1 cut(s) | 40 |
| CfoI | GCGC | 2 cut(s) | 174, 259 |
| Csp6I | GTAC | 2 cut(s) | 366, 439 |
| CviAII | CATG | 3 cut(s) | 38, 325, 398 |
| CviJI | RGCY | 4 cut(s) | 26, 323, 373, 496 |
| CviKI_1 | RGCY | 4 cut(s) | 26, 323, 373, 496 |
| CviQI | GTAC | 2 cut(s) | 366, 439 |
| DpnI | GATC | 2 cut(s) | 9, 82 |
| DpnII | GATC | 2 cut(s) | 7, 80 |
| Eam1104I | CTCTTC | 1 cut(s) | 91 |
| EarI | CTCTTC | 1 cut(s) | 91 |
| Eco130I | CCWWGG | 2 cut(s) | 21, 497 |
| EcoRI | GAATTC | 1 cut(s) | 280 |
| EcoRII | CCWGG | 1 cut(s) | 368 |
| EcoT14I | CCWWGG | 2 cut(s) | 21, 497 |
| ErhI | CCWWGG | 2 cut(s) | 21, 497 |
| FaeI | CATG | 3 cut(s) | 41, 328, 401 |
| FaiI | YATR | 5 cut(s) | 39, 235, 291, 326, 399 |
| FaqI | GGGAC | 1 cut(s) | 103 |
| FatI | CATG | 3 cut(s) | 37, 324, 397 |
| FokI | GGATG | 2 cut(s) | 237, 289 |
| FspBI | CTAG | 1 cut(s) | 60 |
| GlaI | GCGC | 2 cut(s) | 173, 258 |
| HapII | CCGG | 1 cut(s) | 246 |
| HhaI | GCGC | 2 cut(s) | 174, 259 |
| Hin1II | CATG | 3 cut(s) | 41, 328, 401 |
| Hin6I | GCGC | 2 cut(s) | 172, 257 |
| HinP1I | GCGC | 2 cut(s) | 172, 257 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| HinfI | GANTC | 1 cut(s) | 301 |
| HpaII | CCGG | 1 cut(s) | 246 |
| HphI | GGTGA | 3 cut(s) | 106, 203, 224 |
| Hpy166II | GTNNAC | 3 cut(s) | 43, 77, 472 |
| Hpy188I | TCNGA | 1 cut(s) | 300 |
| Hpy188III | TCNNGA | 1 cut(s) | 407 |
| Hpy8I | GTNNAC | 3 cut(s) | 43, 77, 472 |
| HpyAV | CCTTC | 4 cut(s) | 58, 121, 287, 422 |
| HpyCH4III | ACNGT | 1 cut(s) | 476 |
| HpyCH4IV | ACGT | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 395 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 32, 53, 178 |
| HpySE526I | ACGT | 1 cut(s) | 67 |
| Hsp92II | CATG | 3 cut(s) | 41, 328, 401 |
| HspAI | GCGC | 2 cut(s) | 172, 257 |
| KpnI | GGTACC | 1 cut(s) | 369 |
| Kzo9I | GATC | 2 cut(s) | 7, 80 |
| MaeI | CTAG | 1 cut(s) | 60 |
| MaeII | ACGT | 1 cut(s) | 67 |
| MaeIII | GTNAC | 2 cut(s) | 129, 400 |
| MalI | GATC | 2 cut(s) | 9, 82 |
| MboI | GATC | 2 cut(s) | 7, 80 |
| MboII | GAAGA | 3 cut(s) | 99, 108, 476 |
| MluCI | AATT | 3 cut(s) | 16, 280, 418 |
| MmeI | TCCRAC | 1 cut(s) | 278 |
| MnlI | CCTC | 5 cut(s) | 56, 92, 162, 340, 343 |
| MroXI | GAANNNNTTC | 1 cut(s) | 106 |
| MseI | TTAA | 2 cut(s) | 186, 426 |
| MslI | CAYNNNNRTG | 2 cut(s) | 138, 323 |
| MspI | CCGG | 1 cut(s) | 246 |
| MspR9I | CCNGG | 2 cut(s) | 246, 370 |
| Mva1269I | GAATGC | 1 cut(s) | 397 |
| MvaI | CCWGG | 1 cut(s) | 370 |
| MvnI | CGCG | 1 cut(s) | 85 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 32, 53, 178 |
| NciI | CCSGG | 1 cut(s) | 246 |
| NdeII | GATC | 2 cut(s) | 7, 80 |
| NlaIII | CATG | 3 cut(s) | 41, 328, 401 |
| NlaIV | GGNNCC | 2 cut(s) | 367, 478 |
| NmuCI | GTSAC | 2 cut(s) | 129, 400 |
| NspI | RCATGY | 2 cut(s) | 41, 401 |
| PciI | ACATGT | 2 cut(s) | 37, 397 |
| PctI | GAATGC | 1 cut(s) | 397 |
| PdmI | GAANNNNTTC | 1 cut(s) | 106 |
| PfeI | GAWTC | 1 cut(s) | 301 |
| Ple19I | CGATCG | 1 cut(s) | 83 |
| PscI | ACATGT | 2 cut(s) | 37, 397 |
| Psp6I | CCWGG | 1 cut(s) | 368 |
| PspGI | CCWGG | 1 cut(s) | 368 |
| PspN4I | GGNNCC | 2 cut(s) | 367, 478 |
| PvuI | CGATCG | 1 cut(s) | 83 |
| RsaI | GTAC | 2 cut(s) | 367, 440 |
| RsaNI | GTAC | 2 cut(s) | 366, 439 |
| RseI | CAYNNNNRTG | 2 cut(s) | 138, 323 |
| SaqAI | TTAA | 2 cut(s) | 186, 426 |
| Sau3AI | GATC | 2 cut(s) | 7, 80 |
| ScrFI | CCNGG | 2 cut(s) | 246, 370 |
| SetI | ASST | 5 cut(s) | 34, 70, 298, 371, 414 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 138, 323 |
| Sse9I | AATT | 3 cut(s) | 16, 280, 418 |
| SsiI | CCGC | 1 cut(s) | 72 |
| SspMI | CTAG | 1 cut(s) | 60 |
| StyD4I | CCNGG | 2 cut(s) | 244, 368 |
| StyI | CCWWGG | 2 cut(s) | 21, 497 |
| TaaI | ACNGT | 1 cut(s) | 476 |
| TaiI | ACGT | 1 cut(s) | 70 |
| TasI | AATT | 3 cut(s) | 16, 280, 418 |
| TatI | WGTACW | 1 cut(s) | 438 |
| TfiI | GAWTC | 1 cut(s) | 301 |
| Tru1I | TTAA | 2 cut(s) | 186, 426 |
| Tru9I | TTAA | 2 cut(s) | 186, 426 |
| TseFI | GTSAC | 2 cut(s) | 129, 400 |
| Tsp45I | GTSAC | 2 cut(s) | 129, 400 |
| TspDTI | ATGAA | 3 cut(s) | 293, 306, 465 |
| XapI | RAATTY | 2 cut(s) | 280, 418 |
| XceI | RCATGY | 2 cut(s) | 41, 401 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 185 |
| XmnI | GAANNNNTTC | 1 cut(s) | 106 |
| XspI | CTAG | 1 cut(s) | 60 |