pycom05g03010
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
3495283 .. 3497895
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g03010.2

Sequence Viewer

Length: 2205 bp
ATGTTGTCAAAATTTCAATGTTTAAGTGAAAAATATTGTTCATCTATATATTGGATAACCATCCCGCCGGTATGGACATGGACTCAGACCCGCTGGCCAACTTGCACACGACGAGGCAGTGTACGGATTCGACCAGCTTGCTGCTGGCTAAAAGAGAATATCAGATCACCTCCTGAATCAGGTGGCTTTTGGGGATTCTTCTTCGAATTCTTCTGTGAGTGTGGGTTCACAGCGTTTTGGGGAGGCGAAGGAAATGGATATGGTGGTCTTCAGCGGGTGGAGGTGGTTGTATTGACTAGCATAAGAAGGGTAGTATGGTCAAAATGTGTAAAATGGTGCTGGTGTGTAAAACTGAACACTTGGGTATATAAGTGTGATAAATCTTGTAAGCGATCTATCAAATGTAATACACTGAAAAATCATATTTTTCCATCTCTTTTCTCTATCATTCTCTCTCTCTATATTTCTAGGTATTTTCTGGTTTTCTTTCTGAGCACTGTTATCATGGTATCAATCGCCCGGACGATTCTTGGTGTTAATGATGGCTGCAAGTTCACAGCGATTTCTGTCAAAAAGGGTCAAAGGGTTCGTTCATATCAGGTTCTTGGTTTCTCTTTTCGCAGTGCACACCATCTGTTTGTGATATGTTCTACCATTTTTAGCAAATTCAAAGTGTTTGACTGTGGAAGTTGTTTTCGTAGAAGAAAGAAAAAGGCCGATAGCCATAAGAAAAGAAGGGTAGCATATTTGGGGGCGGCGTCTAATGTCAAGATTGAAGGGTTGCTTGGGATGCTTACGGTAAAGCTTCAGGATGACAATTTTGTTAAATGGAGTTTCCAGTTTCAGTCTGTTCTTAGGGGATACAATCTTTTTGATCATTTCACGGGTGAAGATCCATGTCCTCCGAGATTTGTTATTGATACAGAGATCGATCTAGCCTTACTCAGTCTTCTCATTGCTACGCTATCTGATGATGTTATGGAACTCATTATTGGTAGTAAGACTGCGTGTGAGGCCTGGACTTGCTTACAAGAAAGGTTTGTGTCTGTCTCCATGGTTAGAATCAATCAACTGAAGAGTGAGTTTCACACTATCCAAAAAGGTGGGGAATCTGTGGATAGGTTTCTTTTATGGGTTAAAGCAATTAAATATCAACTAGTGTCTGCTGGAGAAAGGATTACTGAGAATGATTTTCTTATAGCTGTGCTATCTGGCTTACCTCTTGAGTTTGAAATGATAAAGACTGTGATATTGGCTCGGGATTCTCCTACATCATATAAAGATTTGAGGTCTTTGAGTACATCCATGGCAGCAATGTATGTTCATGGAGATGGATCTGGTTCCAATGCTTTTCAGAATAATCATAACGGTTTCGAAGTTGGGGAAAGTTCCAATTTTCACAGGTTTCAAGGGGAATATGATGGAGAACACTCCAATGCGTTTCATGGTGGTTCTGGCTTTGTGGGGAATGGTGACAGGTTTGTACAGAAGAGCAATTTTTCAGTGGGAAATAAGCGGTATAATGGCAATTATAACAATGGTAATTTTGATCATAGAAGTAATAATGGTTCAAGAAACTTCTCTGGCAATGGAAATCAATCTGGTCACAGAAGTAACAATGGCAATTTTAATGGCAACTTTTCTGGCAATGGTAAAAATGTTCAGTCACAGAATGGAAGCAGTTTCTCCGGTAGTGGTTTTCAAAAGAGTAATACCTGGAATGGCAATACAACTTACAGATCTGGTGTTTCACCTGAATGTCAAATATGTTTTAGGAGAGGACATACAGCAACTAATTGCTATCACAGAGCTGCCACTGGAAATACAAGGTTCCTTGCTTGTCAGATTTGTGGGAAAAGAGGACATATTGCACTGGAGGGTTATCATCGAAATAATTTTGGTTATCAGGGTACTCCACCACCTTCTTCCTTGACTGCAATGACTGCACAGGCTAATATTGGACAGAATGCACCACAAAACAATGGACATGGGTTCTCAAATGGGGATACTTGGATTCTAGACACCGAAGCTACACACCACATGACTTCTAATGTTCATGCACTTTCTCAAGTCAATTCTTACAATGGAGATGAAAAGATAACAATTGGAAATGGTGAAGGTTTGGCAATCAAGAACATTGGTTCTTCTACAATTACAACTCCAAATAATGCTTTAATTCTGTATAATGTTTTGCATGTGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

735

Amino Acids

82.05

Weight (kDa)

9.31

Isoelectric Point (pI)

34.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000034)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34070
fragaria_vesca FvH4_1g00961 FvH4_1g10351 FvH4_1g15351 FvH4_1g26571 FvH4_1g26621 FvH4_1g28434 FvH4_2g00591 FvH4_2g06411 FvH4_2g16831 FvH4_2g20161 FvH4_2g23291 FvH4_3g04191 FvH4_3g07021 FvH4_3g17162 FvH4_3g17262 FvH4_3g38081 FvH4_3g39581 FvH4_3g45090 FvH4_4g05782 FvH4_4g05872 FvH4_4g13041 FvH4_4g23411 FvH4_4g24051 FvH4_4g26452 FvH4_4g26453 FvH4_4g27903 FvH4_4g33449 FvH4_5g01072 FvH4_5g03532 FvH4_5g04140 FvH4_5g06631 FvH4_5g09401 FvH4_5g09403 FvH4_5g20624 FvH4_5g20701 FvH4_5g21971 FvH4_5g36481 FvH4_5g38691 FvH4_6g11492 FvH4_6g19792 FvH4_6g20601 FvH4_6g24641 FvH4_6g34291 FvH4_6g36662 FvH4_6g36681 FvH4_6g36682 FvH4_6g36682 FvH4_6g36682 FvH4_6g36770 FvH4_6g36981 FvH4_6g37021 FvH4_6g37022 FvH4_6g43610 FvH4_7g10872 FvH4_7g10872 FvH4_7g16100 FvH4_7g19191 FvH4_7g23761 FvH4_7g24921
malus_domestica MD01G1077600.v1.1 MD02G1010600.v1.1 MD03G1059500.v1.1 MD04G1024600.v1.1 MD04G1101800.v1.1 MD04G1151700.v1.1 MD05G1025000.v1.1 MD05G1129300.v1.1 MD05G1320000.v1.1 MD06G1136100.v1.1 MD08G1157400.v1.1 MD09G1041800.v1.1 MD10G1109600.v1.1 MD10G1255600.v1.1 MD11G1108900.v1.1 MD11G1145100.v1.1 MD11G1242500.v1.1 MD12G1113300.v1.1 MD12G1231800.v1.1 MD13G1099200.v1.1 MD13G1142500.v1.1 MD15G1114200.v1.1 MD15G1119400.v1.1 MD15G1372100.v1.1 MD16G1038200.v1.1 MD16G1163700.v1.1 MD17G1055600.v1.1 MD17G1089000.v1.1 MD17G1109500.v1.1
prunus_persica Prupe.1G091500_v2.0.a1 Prupe.1G170400_v2.0.a1 Prupe.2G074700_v2.0.a1 Prupe.3G024500_v2.0.a1 Prupe.3G026300_v2.0.a1 Prupe.3G245500_v2.0.a1 Prupe.4G199600_v2.0.a1 Prupe.4G230800_v2.0.a1 Prupe.4G238700_v2.0.a1 Prupe.6G052200_v2.0.a1 Prupe.8G080900_v2.0.a1 Prupe.8G084200_v2.0.a1 Prupe.8G185000_v2.0.a1 Prupe.8G185100_v2.0.a1
pyrus_communis pycom01g07890 pycom01g09690 pycom01g14780 pycom01g18640 pycom03g07210 pycom05g03010 pycom05g11250 pycom05g23340 pycom05g27720 pycom06g05610 pycom06g12180 pycom09g06110 pycom09g08430 pycom10g16550 pycom11g03760 pycom11g24270 pycom12g12290 pycom13g10850 pycom13g18230 pycom13g22260 pycom13g27850 pycom14g17700 pycom15g07910 pycom15g26210 pycom15g26440 pycom15g29540 pycom16g00280 pycom16g18160 pycom17g16360 pycom17g19900
rosa_chinensis RchiOBHm_Chr1g0313671 RchiOBHm_Chr1g0322301 RchiOBHm_Chr1g0334441 RchiOBHm_Chr1g0337651 RchiOBHm_Chr1g0337711 RchiOBHm_Chr1g0339131 RchiOBHm_Chr1g0344491 RchiOBHm_Chr1g0347771 RchiOBHm_Chr1g0349331 RchiOBHm_Chr1g0354241 RchiOBHm_Chr1g0355351 RchiOBHm_Chr1g0376111 RchiOBHm_Chr1g0379881 RchiOBHm_Chr1g0384421 RchiOBHm_Chr2g0101531 RchiOBHm_Chr2g0117741 RchiOBHm_Chr2g0126581 RchiOBHm_Chr2g0129181 RchiOBHm_Chr2g0136201 RchiOBHm_Chr2g0137991 RchiOBHm_Chr2g0156571 RchiOBHm_Chr2g0159441 RchiOBHm_Chr2g0164131 RchiOBHm_Chr2g0174291 RchiOBHm_Chr2g0175161 RchiOBHm_Chr3g0448481 RchiOBHm_Chr3g0450851 RchiOBHm_Chr3g0450861 RchiOBHm_Chr3g0461251 RchiOBHm_Chr3g0463031 RchiOBHm_Chr3g0465981 RchiOBHm_Chr3g0472811 RchiOBHm_Chr3g0472821 RchiOBHm_Chr3g0480521 RchiOBHm_Chr3g0480531 RchiOBHm_Chr3g0482021 RchiOBHm_Chr3g0496771 RchiOBHm_Chr4g0393151 RchiOBHm_Chr4g0407171 RchiOBHm_Chr4g0431731 RchiOBHm_Chr4g0432071 RchiOBHm_Chr4g0436951 RchiOBHm_Chr5g0000711 RchiOBHm_Chr5g0004361 RchiOBHm_Chr5g0012631 RchiOBHm_Chr5g0025271 RchiOBHm_Chr5g0032551 RchiOBHm_Chr5g0038991 RchiOBHm_Chr5g0043811 RchiOBHm_Chr5g0058511 RchiOBHm_Chr5g0077241 RchiOBHm_Chr5g0079981 RchiOBHm_Chr5g0083071 RchiOBHm_Chr6g0256871 RchiOBHm_Chr6g0266721 RchiOBHm_Chr6g0299971 RchiOBHm_Chr6g0304931 RchiOBHm_Chr7g0177331 RchiOBHm_Chr7g0182851 RchiOBHm_Chr7g0190501 RchiOBHm_Chr7g0200091 RchiOBHm_Chr7g0203981 RchiOBHm_Chr7g0206011 RchiOBHm_Chr7g0206111 RchiOBHm_Chr7g0206441 RchiOBHm_Chr7g0220151 RchiOBHm_Chr7g0234441 RchiOBHm_Chr7g0234661 RchiOBHm_Chr7g0238281
rosa_laevigata RLG00000003338 RLG00000020373 RLG00000020377 RLG00000020415 RLG00000020416 RLG00000026600
rosa_multiflora Rmu_co8214922.1_g000001 Rmu_co8257903.1_g000001 Rmu_co8295123.1_g000001 Rmu_sc0000177.1_g000007 Rmu_sc0000614.1_g000005 Rmu_sc0000648.1_g000003 Rmu_sc0000809.1_g000004 Rmu_sc0001044.1_g000022 Rmu_sc0001211.1_g000100 Rmu_sc0001306.1_g000013 Rmu_sc0001493.1_g000053 Rmu_sc0001605.1_g000001 Rmu_sc0001706.1_g000033 Rmu_sc0001966.1_g000037 Rmu_sc0002080.1_g000051 Rmu_sc0002244.1_g000027 Rmu_sc0002669.1_g000045 Rmu_sc0002806.1_g000013 Rmu_sc0003012.1_g000028 Rmu_sc0003074.1_g000019 Rmu_sc0003180.1_g000020 Rmu_sc0003229.1_g000006 Rmu_sc0003229.1_g000015 Rmu_sc0003267.1_g000017 Rmu_sc0003387.1_g000008 Rmu_sc0004109.1_g000011 Rmu_sc0004483.1_g000021 Rmu_sc0004729.1_g000018 Rmu_sc0005124.1_g000007 Rmu_sc0006187.1_g000007 Rmu_sc0006311.1_g000005 Rmu_sc0006323.1_g000009 Rmu_sc0006619.1_g000003 Rmu_sc0006619.1_g000004 Rmu_sc0007216.1_g000004 Rmu_sc0012033.1_g000003 Rmu_sc0012414.1_g000003 Rmu_sc0013716.1_g000004 Rmu_sc0017020.1_g000002 Rmu_sc0017650.1_g000008 Rmu_sc0022997.1_g000002 Rmu_sc0026059.1_g000001 Rmu_sc0034277.1_g000001 Rmu_sc0038462.1_g000001 Rmu_ssc0000134.1_g000019 Rmu_ssc0000326.1_g000010 Rmu_ssc0000337.1_g000002
rosa_roxburghii Rroxscaffold_153G00436580 Rroxscaffold_1G00005540 Rroxscaffold_1G00007910 Rroxscaffold_1G00020780 Rroxscaffold_1G00024800 Rroxscaffold_1G00028530 Rroxscaffold_1G00035960 Rroxscaffold_1G00060770 Rroxscaffold_1G00063880 Rroxscaffold_1G00072730 Rroxscaffold_2G00090480 Rroxscaffold_2G00098360 Rroxscaffold_2G00098380 Rroxscaffold_2G00098390 Rroxscaffold_2G00098410 Rroxscaffold_2G00098420 Rroxscaffold_2G00099480 Rroxscaffold_2G00122440 Rroxscaffold_2G00130690 Rroxscaffold_2G00132840 Rroxscaffold_3G00259940 Rroxscaffold_3G00262860 Rroxscaffold_3G00262870 Rroxscaffold_3G00262880 Rroxscaffold_3G00262890 Rroxscaffold_4G00296680 Rroxscaffold_4G00315340 Rroxscaffold_5G00341760 Rroxscaffold_5G00350520 Rroxscaffold_5G00365550 Rroxscaffold_5G00367740 Rroxscaffold_5G00375090 Rroxscaffold_5G00377290 Rroxscaffold_6G00400710 Rroxscaffold_6G00402880 Rroxscaffold_6G00418980 Rroxscaffold_6G00419370 Rroxscaffold_6G00430760 Rroxscaffold_7G00161960 Rroxscaffold_7G00166140 Rroxscaffold_7G00175330 Rroxscaffold_7G00206820 Rroxscaffold_7G00212670
rosa_rugosa Rorug01G0429300 Rorug01G0429400 Rorug02G0276300 Rorug02G0362300 Rorug02G0412000 Rorug04G0283500.1 Rorug05G0121800 Rorug05G0138500 Rorug05G0138600 Rorug05G0221000 Rorug05G0556000 Rorug07G0094400 Rorug07G0119200
rosa_samantha Rh1AG022500 Rh1AG214800 Rh1AG295500 Rh1DG290300 Rh2AG469300 Rh2AG469600 Rh2AG469800 Rh2AG470000 Rh2AG472200 Rh2AG472300 Rh2AG472400 Rh2BG358100 Rh2BG456100 Rh2BG481900 Rh2BG482100 Rh2BG482300 Rh2BG482400 Rh2BG484300 Rh2BG484400 Rh2CG255600 Rh2CG455400 Rh2CG455500 Rh2CG455600 Rh2CG455900 Rh2CG456100 Rh2CG458100 Rh2CG458200 Rh2CG458300 Rh2DG466000 Rh2DG490700 Rh2DG490900 Rh2DG491100 Rh2DG491200 Rh2DG493500 Rh2DG493600 Rh4AG091000 Rh4BG347200 Rh4CG082200 Rh4CG099300 Rh5AG230100 Rh5AG230300 Rh5AG302500 Rh5AG302600 Rh5BG214100 Rh5BG231000 Rh5BG231100 Rh5BG310700 Rh5BG543300 Rh5CG238000 Rh5CG259000 Rh5CG259100 Rh5CG566500 Rh5DG027500 Rh5DG218700 Rh5DG236100 Rh5DG236300 Rh6AG285400 Rh6BG286900 Rh6BG376000 Rh6DG235600 Rh6DG280900 Rh6DG368700 Rh6DG423800 Rh7AG106800 Rh7AG226500 Rh7AG227900 Rh7AG228000 Rh7AG229300 Rh7BG097000 Rh7BG121300 Rh7BG129300 Rh7BG130100 Rh7BG222700 Rh7BG225700 Rh7BG225800 Rh7CG111500 Rh7CG131300 Rh7CG131600 Rh7CG131700 Rh7CG132100 Rh7CG132400 Rh7CG132500 Rh7CG132700 Rh7CG132900 Rh7CG221800 Rh7CG242400 Rh7CG242500 Rh7CG243800 Rh7CG244000 Rh7CG365700 Rh7DG109900 Rh7DG110000 Rh7DG129000 Rh7DG130400 Rh7DG236200 Rh7DG236300
rosa_wichuraiana Rw0G001140 Rw0G001660 Rw0G003710 Rw0G003800 Rw0G005640 Rw0G009930 Rw1G005610 Rw1G011690 Rw1G018880 Rw1G026950 Rw1G029360 Rw1G032170 Rw1G035710 Rw2G023950 Rw2G030240 Rw2G038210 Rw2G038490 Rw2G038500 Rw2G054270 Rw3G009830 Rw4G005830 Rw4G006210 Rw4G006690 Rw4G014470 Rw4G015560 Rw4G021550 Rw4G033420 Rw4G034150 Rw5G000890 Rw5G002510 Rw5G002580 Rw5G003440 Rw5G009960 Rw5G024480 Rw5G032910 Rw5G032990 Rw5G035340 Rw5G042620 Rw6G004790 Rw6G012300 Rw6G017050 Rw6G019300 Rw6G026800 Rw6G027320 Rw6G039180 Rw7G010750 Rw7G010920 Rw7G014890 Rw7G016540 Rw7G019730 Rw7G022510 Rw7G023070 Rw7G038740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1533
AciI CCGC 5 cut(s) 65, 91, 274, 755, 1516
AclWI GGATC 2 cut(s) 887, 1342
AcoI YGGCCR 1 cut(s) 95
AcsI RAATTY 3 cut(s) 11, 206, 665
AcuI CTGAAG 3 cut(s) 254, 791, 1094
AcyI GRCGYC 1 cut(s) 758
AfaI GTAC 4 cut(s) 123, 1300, 1485, 1912
AfiI CCNNNNNNNGG 1 cut(s) 179
AgsI TTSAA 7 cut(s) 17, 670, 776, 1232, 1409, 1572, 1703
AhlI ACTAGT 1 cut(s) 1156
AjnI CCWGG 2 cut(s) 1016, 1715
AjuI GAANNNNNNNTTGG 4 cut(s) 768, 800, 975, 1007
AluBI AGCT 5 cut(s) 137, 805, 1202, 1811, 2030
AluI AGCT 5 cut(s) 137, 805, 1202, 1811, 2030
Alw21I GWGCWC 2 cut(s) 497, 628
Alw26I GTCTC 1 cut(s) 1054
Alw44I GTGCAC 1 cut(s) 624
AlwI GGATC 2 cut(s) 887, 1342
Ama87I CYCGRG 1 cut(s) 1257
AoxI GGCC 3 cut(s) 95, 714, 1014
ApaLI GTGCAC 1 cut(s) 624
ApeKI GCWGC 4 cut(s) 141, 546, 1310, 1811
ApoI RAATTY 3 cut(s) 11, 206, 665
AsuC2I CCSGG 1 cut(s) 520
AsuHPI GGTGA 5 cut(s) 159, 899, 1484, 1743, 2126
AsuII TTCGAA 2 cut(s) 204, 1374
AvaI CYCGRG 1 cut(s) 1257
BaeGI GKGCMC 1 cut(s) 628
BalI TGGCCA 1 cut(s) 97
BbsI GAAGAC 2 cut(s) 260, 941
Bbv12I GWGCWC 2 cut(s) 497, 628
BbvI GCAGC 4 cut(s) 128, 533, 1322, 1798
BccI CCATC 6 cut(s) 68, 439, 536, 639, 1325, 1415
BcgI CGANNNNNNTGC 2 cut(s) 120, 154
BciT130I CCWGG 2 cut(s) 1018, 1717
BciVI GTATCC 2 cut(s) 854, 1999
BclI TGATCA 2 cut(s) 874, 1549
BcnI CCSGG 1 cut(s) 520
BcoDI GTCTC 1 cut(s) 1054
BcuI ACTAGT 1 cut(s) 1156
BfaI CTAG 5 cut(s) 297, 468, 935, 1157, 2018
BfuI GTATCC 2 cut(s) 854, 1999
BglII AGATCT 1 cut(s) 1739
BisI GCNGC 5 cut(s) 142, 547, 756, 1311, 1812
BlsI GCNGC 5 cut(s) 143, 548, 757, 1312, 1813
Bme1390I CCNGG 3 cut(s) 520, 1018, 1717
BmeT110I CYCGRG 1 cut(s) 1257
BmiI GGNNCC 2 cut(s) 1342, 1832
BmrFI CCNGG 3 cut(s) 520, 1018, 1717
BmsI GCATC 1 cut(s) 780
BpiI GAAGAC 2 cut(s) 260, 941
BpmI CTGGAG 2 cut(s) 1188, 1895
Bpu14I TTCGAA 2 cut(s) 204, 1374
BpuEI CTTGAG 2 cut(s) 1244, 2052
BpuMI CCSGG 1 cut(s) 520
Bsa29I ATCGAT 1 cut(s) 930
BsaBI GATNNNNATC 1 cut(s) 59
BsaHI GRCGYC 1 cut(s) 758
BsaJI CCNNGG 2 cut(s) 1053, 1305
BsaWI WCCGGW 1 cut(s) 1688
Bsc4I CCNNNNNNNGG 1 cut(s) 179
Bse118I RCCGGY 1 cut(s) 67
Bse1I ACTGG 3 cut(s) 838, 1822, 1878
Bse3DI GCAATG 5 cut(s) 954, 1320, 1594, 1654, 1944
Bse8I GATNNNNATC 1 cut(s) 59
BseBI CCWGG 2 cut(s) 1018, 1717
BseCI ATCGAT 1 cut(s) 930
BseDI CCNNGG 2 cut(s) 1053, 1305
BseGI GGATG 4 cut(s) 60, 795, 817, 1301
BseJI GATNNNNATC 1 cut(s) 59
BseLI CCNNNNNNNGG 1 cut(s) 179
BseMI GCAATG 5 cut(s) 954, 1320, 1594, 1654, 1944
BseMII CTCAG 4 cut(s) 98, 482, 958, 1173
BseNI ACTGG 3 cut(s) 838, 1822, 1878
BseSI GKGCMC 1 cut(s) 628
BseXI GCAGC 4 cut(s) 128, 533, 1322, 1798
BsgI GTGCAG 1 cut(s) 1929
BshFI GGCC 3 cut(s) 97, 716, 1016
BshVI ATCGAT 1 cut(s) 930
BsiHKAI GWGCWC 2 cut(s) 497, 628
BsiHKCI CYCGRG 1 cut(s) 1257
BsiSI CCGG 3 cut(s) 68, 520, 1689
BslI CCNNNNNNNGG 1 cut(s) 179
BsmAI GTCTC 1 cut(s) 1054
BsmI GAATGC 1 cut(s) 1972
BsnI GGCC 3 cut(s) 97, 716, 1016
BsoBI CYCGRG 1 cut(s) 1257
Bsp119I TTCGAA 2 cut(s) 204, 1374
Bsp1286I GDGCHC 2 cut(s) 497, 628
Bsp1407I TGTACA 1 cut(s) 1483
Bsp143I GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
Bsp19I CCATGG 2 cut(s) 1053, 1305
BspACI CCGC 5 cut(s) 65, 91, 274, 755, 1516
BspANI GGCC 3 cut(s) 97, 716, 1016
BspCNI CTCAG 4 cut(s) 97, 483, 957, 1174
BspDI ATCGAT 1 cut(s) 930
BspLI GGNNCC 2 cut(s) 1342, 1832
BspPI GGATC 2 cut(s) 887, 1342
BspQI GCTCTTC 1 cut(s) 1484
BspT104I TTCGAA 2 cut(s) 204, 1374
BsrDI GCAATG 5 cut(s) 954, 1320, 1594, 1654, 1944
BsrFI RCCGGY 1 cut(s) 67
BsrGI TGTACA 1 cut(s) 1483
BsrI ACTGG 3 cut(s) 838, 1822, 1878
BssAI RCCGGY 1 cut(s) 67
BssECI CCNNGG 2 cut(s) 1053, 1305
BssMI GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
BssNI GRCGYC 1 cut(s) 758
BssT1I CCWWGG 2 cut(s) 1053, 1305
Bst2UI CCWGG 2 cut(s) 1018, 1717
Bst4CI ACNGT 5 cut(s) 499, 683, 799, 1246, 1370
Bst6I CTCTTC 2 cut(s) 1070, 1484
BstACI GRCGYC 1 cut(s) 758
BstAPI GCANNNNNTGC 1 cut(s) 1943
BstAUI TGTACA 1 cut(s) 1483
BstBI TTCGAA 2 cut(s) 204, 1374
BstC8I GCNNGC 3 cut(s) 95, 139, 146
BstDEI CTNAG 5 cut(s) 84, 491, 854, 944, 1182
BstDSI CCRYGG 2 cut(s) 1053, 1305
BstENI CCTNNNNNAGG 1 cut(s) 177
BstF5I GGATG 4 cut(s) 60, 795, 817, 1301
BstKTI GATC 9 cut(s) 167, 395, 877, 895, 930, 934, 1337, 1552, 1742
BstMAI GTCTC 1 cut(s) 1054
BstMBI GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
BstMWI GCNNNNNNNGC 3 cut(s) 790, 1013, 1943
BstNI CCWGG 2 cut(s) 1018, 1717
BstNSI RCATGY 1 cut(s) 2198
BstSCI CCNGG 3 cut(s) 518, 1016, 1715
BstSLI GKGCMC 1 cut(s) 628
BstV1I GCAGC 4 cut(s) 128, 533, 1322, 1798
BstV2I GAAGAC 2 cut(s) 260, 941
BstX2I RGATCY 3 cut(s) 892, 1334, 1739
BstXI CCANNNNNNTGG 1 cut(s) 1103
BstYI RGATCY 3 cut(s) 892, 1334, 1739
Bsu15I ATCGAT 1 cut(s) 930
BsuI GTATCC 2 cut(s) 854, 1999
BsuRI GGCC 3 cut(s) 97, 716, 1016
BsuTUI ATCGAT 1 cut(s) 930
BtgI CCRYGG 2 cut(s) 1053, 1305
BtsCI GGATG 4 cut(s) 60, 795, 817, 1301
BtsI GCAGTG 2 cut(s) 124, 628
BtsIMutI CAGTG 7 cut(s) 124, 410, 495, 628, 1509, 1815, 1871
Cac8I GCNNGC 3 cut(s) 95, 139, 146
Cfr10I RCCGGY 1 cut(s) 67
ClaI ATCGAT 1 cut(s) 930
CseI GACGC 1 cut(s) 747
Csp6I GTAC 4 cut(s) 122, 1299, 1484, 1911
CviQI GTAC 4 cut(s) 122, 1299, 1484, 1911
DdeI CTNAG 5 cut(s) 84, 491, 854, 944, 1182
DpnI GATC 9 cut(s) 166, 394, 876, 894, 929, 933, 1336, 1551, 1741
DpnII GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
EaeI YGGCCR 1 cut(s) 95
Eam1104I CTCTTC 2 cut(s) 1070, 1484
EarI CTCTTC 2 cut(s) 1070, 1484
Eco130I CCWWGG 2 cut(s) 1053, 1305
Eco147I AGGCCT 1 cut(s) 1016
Eco57I CTGAAG 3 cut(s) 254, 791, 1094
Eco88I CYCGRG 1 cut(s) 1257
EcoNI CCTNNNNNAGG 1 cut(s) 177
EcoRI GAATTC 1 cut(s) 206
EcoRII CCWGG 2 cut(s) 1016, 1715
EcoT14I CCWWGG 2 cut(s) 1053, 1305
ErhI CCWWGG 2 cut(s) 1053, 1305
FalI AAGNNNNNCTT 2 cut(s) 768, 800
FauI CCCGC 3 cut(s) 72, 98, 267
FbaI TGATCA 2 cut(s) 874, 1549
Fnu4HI GCNGC 5 cut(s) 142, 547, 756, 1311, 1812
FokI GGATG 4 cut(s) 47, 802, 824, 1288
Fsp4HI GCNGC 5 cut(s) 142, 547, 756, 1311, 1812
FspBI CTAG 5 cut(s) 297, 468, 935, 1157, 2018
GluI GCNGC 5 cut(s) 142, 547, 756, 1311, 1812
GsuI CTGGAG 2 cut(s) 1188, 1895
HaeIII GGCC 3 cut(s) 97, 716, 1016
HapII CCGG 3 cut(s) 68, 520, 1689
HgaI GACGC 1 cut(s) 747
Hin1I GRCGYC 1 cut(s) 758
HindIII AAGCTT 1 cut(s) 803
HinfI GANTC 9 cut(s) 82, 127, 176, 195, 526, 1062, 1109, 1262, 2014
HpaII CCGG 3 cut(s) 68, 520, 1689
HphI GGTGA 5 cut(s) 159, 899, 1484, 1743, 2126
Hpy166II GTNNAC 4 cut(s) 122, 228, 555, 626
Hpy188I TCNGA 7 cut(s) 87, 164, 492, 906, 970, 1356, 1845
Hpy188III TCNNGA 8 cut(s) 173, 769, 809, 1223, 1259, 1572, 2018, 2131
Hpy8I GTNNAC 4 cut(s) 122, 228, 555, 626
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 6 cut(s) 242, 300, 729, 770, 1932, 2111
HpyCH4III ACNGT 5 cut(s) 499, 683, 799, 1246, 1370
HpyCH4V TGCA 9 cut(s) 105, 549, 626, 1871, 1937, 1946, 1970, 2060, 2194
HpyF10VI GCNNNNNNNGC 3 cut(s) 790, 1013, 1943
HpyF3I CTNAG 5 cut(s) 84, 491, 854, 944, 1182
Hsp92I GRCGYC 1 cut(s) 758
Ksp22I TGATCA 2 cut(s) 874, 1549
Kzo9I GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
LguI GCTCTTC 1 cut(s) 1484
Lsp1109I GCAGC 4 cut(s) 128, 533, 1322, 1798
LweI GCATC 1 cut(s) 780
MaeI CTAG 5 cut(s) 297, 468, 935, 1157, 2018
MaeIII GTNAC 4 cut(s) 1472, 1604, 1613, 1665
MalI GATC 9 cut(s) 166, 394, 876, 894, 929, 933, 1336, 1551, 1741
MboI GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
MfeI CAATTG 1 cut(s) 2103
MflI RGATCY 3 cut(s) 892, 1334, 1739
MhlI GDGCHC 2 cut(s) 497, 628
MlsI TGGCCA 1 cut(s) 97
MluNI TGGCCA 1 cut(s) 97
MlyI GAGTC 1 cut(s) 76
Mox20I TGGCCA 1 cut(s) 97
MscI TGGCCA 1 cut(s) 97
MseI TTAA 8 cut(s) 23, 537, 825, 1137, 1146, 1629, 2174, 2203
MslI CAYNNNNRTG 3 cut(s) 1329, 1434, 1756
Msp20I TGGCCA 1 cut(s) 97
MspA1I CMGCKG 2 cut(s) 93, 274
MspI CCGG 3 cut(s) 68, 520, 1689
MspR9I CCNGG 3 cut(s) 520, 1018, 1717
MunI CAATTG 1 cut(s) 2103
Mva1269I GAATGC 1 cut(s) 1972
MvaI CCWGG 2 cut(s) 1018, 1717
MwoI GCNNNNNNNGC 3 cut(s) 790, 1013, 1943
NciI CCSGG 1 cut(s) 520
NcoI CCATGG 2 cut(s) 1053, 1305
NdeII GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
NlaIV GGNNCC 2 cut(s) 1342, 1832
NmuCI GTSAC 3 cut(s) 1472, 1604, 1665
NspI RCATGY 1 cut(s) 2198
NspV TTCGAA 2 cut(s) 204, 1374
PceI AGGCCT 1 cut(s) 1016
PciSI GCTCTTC 1 cut(s) 1484
PctI GAATGC 1 cut(s) 1972
PfeI GAWTC 8 cut(s) 127, 176, 195, 526, 1062, 1109, 1262, 2014
PkrI GCNGC 5 cut(s) 143, 548, 757, 1312, 1813
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
PsiI TTATAA 1 cut(s) 1533
Psp6I CCWGG 2 cut(s) 1016, 1715
PspGI CCWGG 2 cut(s) 1016, 1715
PspN4I GGNNCC 2 cut(s) 1342, 1832
PsrI GAACNNNNNNTAC 2 cut(s) 1552, 1584
PsuI RGATCY 3 cut(s) 892, 1334, 1739
RsaI GTAC 4 cut(s) 123, 1300, 1485, 1912
RsaNI GTAC 4 cut(s) 122, 1299, 1484, 1911
RseI CAYNNNNRTG 3 cut(s) 1329, 1434, 1756
SapI GCTCTTC 1 cut(s) 1484
SaqAI TTAA 8 cut(s) 23, 537, 825, 1137, 1146, 1629, 2174, 2203
SatI GCNGC 5 cut(s) 142, 547, 756, 1311, 1812
Sau3AI GATC 9 cut(s) 164, 392, 874, 892, 927, 931, 1334, 1549, 1739
SchI GAGTC 1 cut(s) 76
ScrFI CCNGG 3 cut(s) 520, 1018, 1717
SduI GDGCHC 2 cut(s) 497, 628
SfaNI GCATC 1 cut(s) 780
SfuI TTCGAA 2 cut(s) 204, 1374
SmiMI CAYNNNNRTG 3 cut(s) 1329, 1434, 1756
SmlI CTYRAG 2 cut(s) 1223, 2067
SmoI CTYRAG 2 cut(s) 1223, 2067
SpeI ACTAGT 1 cut(s) 1156
SseBI AGGCCT 1 cut(s) 1016
SsiI CCGC 5 cut(s) 65, 91, 274, 755, 1516
SspI AATATT 2 cut(s) 35, 1957
SspMI CTAG 5 cut(s) 297, 468, 935, 1157, 2018
StuI AGGCCT 1 cut(s) 1016
StyD4I CCNGG 3 cut(s) 518, 1016, 1715
StyI CCWWGG 2 cut(s) 1053, 1305
TaaI ACNGT 5 cut(s) 499, 683, 799, 1246, 1370
TaqI TCGA 5 cut(s) 130, 204, 930, 1374, 1888
TatI WGTACW 2 cut(s) 1298, 1483
TauI GCSGC 1 cut(s) 758
TfiI GAWTC 8 cut(s) 127, 176, 195, 526, 1062, 1109, 1262, 2014
Tru1I TTAA 8 cut(s) 23, 537, 825, 1137, 1146, 1629, 2174, 2203
Tru9I TTAA 8 cut(s) 23, 537, 825, 1137, 1146, 1629, 2174, 2203
TscAI CASTG 7 cut(s) 124, 417, 502, 628, 1509, 1822, 1878
TseFI GTSAC 3 cut(s) 1472, 1604, 1665
TseI GCWGC 4 cut(s) 141, 546, 1310, 1811
Tsp45I GTSAC 3 cut(s) 1472, 1604, 1665
TspDTI ATGAA 6 cut(s) 30, 582, 1313, 1433, 2045, 2106
TspGWI ACGGA 1 cut(s) 139
TspRI CASTG 7 cut(s) 124, 417, 502, 628, 1509, 1822, 1878
VneI GTGCAC 1 cut(s) 624
XagI CCTNNNNNAGG 1 cut(s) 177
XapI RAATTY 3 cut(s) 11, 206, 665
XbaI TCTAGA 1 cut(s) 2017
XceI RCATGY 1 cut(s) 2198
XcmI CCANNNNNNNNNTGG 1 cut(s) 141
XspI CTAG 5 cut(s) 297, 468, 935, 1157, 2018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.