gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 284 |
| AcsI | RAATTY | 2 cut(s) | 253, 260 |
| AfaI | GTAC | 1 cut(s) | 91 |
| AgsI | TTSAA | 3 cut(s) | 34, 213, 280 |
| AoxI | GGCC | 1 cut(s) | 25 |
| ApeKI | GCWGC | 1 cut(s) | 248 |
| ApoI | RAATTY | 2 cut(s) | 253, 260 |
| AspS9I | GGNCC | 1 cut(s) | 225 |
| AvaII | GGWCC | 1 cut(s) | 225 |
| BbvI | GCAGC | 1 cut(s) | 260 |
| BccI | CCATC | 2 cut(s) | 70, 121 |
| BclI | TGATCA | 1 cut(s) | 156 |
| BisI | GCNGC | 1 cut(s) | 249 |
| BlsI | GCNGC | 1 cut(s) | 250 |
| Bme18I | GGWCC | 1 cut(s) | 225 |
| BmgT120I | GGNCC | 1 cut(s) | 225 |
| BpuEI | CTTGAG | 1 cut(s) | 197 |
| BseGI | GGATG | 1 cut(s) | 132 |
| BseXI | GCAGC | 1 cut(s) | 260 |
| BshFI | GGCC | 1 cut(s) | 27 |
| BsnI | GGCC | 1 cut(s) | 27 |
| Bsp143I | GATC | 1 cut(s) | 156 |
| BspANI | GGCC | 1 cut(s) | 27 |
| BspHI | TCATGA | 1 cut(s) | 115 |
| BssMI | GATC | 1 cut(s) | 156 |
| Bst4CI | ACNGT | 1 cut(s) | 140 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 132 |
| BstKTI | GATC | 1 cut(s) | 159 |
| BstMBI | GATC | 1 cut(s) | 156 |
| BstV1I | GCAGC | 1 cut(s) | 260 |
| BsuRI | GGCC | 1 cut(s) | 27 |
| BtsCI | GGATG | 1 cut(s) | 132 |
| CciI | TCATGA | 1 cut(s) | 115 |
| Cfr13I | GGNCC | 1 cut(s) | 225 |
| Csp6I | GTAC | 1 cut(s) | 90 |
| CviAII | CATG | 2 cut(s) | 23, 116 |
| CviJI | RGCY | 1 cut(s) | 27 |
| CviKI_1 | RGCY | 1 cut(s) | 27 |
| CviQI | GTAC | 1 cut(s) | 90 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 1 cut(s) | 158 |
| DpnII | GATC | 1 cut(s) | 156 |
| Eco47I | GGWCC | 1 cut(s) | 225 |
| EcoRI | GAATTC | 1 cut(s) | 260 |
| FaeI | CATG | 2 cut(s) | 26, 119 |
| FaiI | YATR | 6 cut(s) | 24, 117, 155, 223, 246, 272 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 78, 110 |
| FatI | CATG | 2 cut(s) | 22, 115 |
| FbaI | TGATCA | 1 cut(s) | 156 |
| FblI | GTMKAC | 1 cut(s) | 284 |
| Fnu4HI | GCNGC | 1 cut(s) | 249 |
| FokI | GGATG | 1 cut(s) | 139 |
| Fsp4HI | GCNGC | 1 cut(s) | 249 |
| GluI | GCNGC | 1 cut(s) | 249 |
| HaeIII | GGCC | 1 cut(s) | 27 |
| Hin1II | CATG | 2 cut(s) | 26, 119 |
| HinfI | GANTC | 1 cut(s) | 47 |
| Hpy166II | GTNNAC | 1 cut(s) | 285 |
| Hpy188I | TCNGA | 2 cut(s) | 259, 302 |
| Hpy188III | TCNNGA | 3 cut(s) | 31, 116, 176 |
| Hpy8I | GTNNAC | 1 cut(s) | 285 |
| HpyAV | CCTTC | 1 cut(s) | 80 |
| HpyCH4III | ACNGT | 1 cut(s) | 140 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 248, 292 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Hsp92II | CATG | 2 cut(s) | 26, 119 |
| Ksp22I | TGATCA | 1 cut(s) | 156 |
| Kzo9I | GATC | 1 cut(s) | 156 |
| LmnI | GCTCC | 1 cut(s) | 130 |
| LpnPI | CCDG | 2 cut(s) | 123, 176 |
| Lsp1109I | GCAGC | 1 cut(s) | 260 |
| MalI | GATC | 1 cut(s) | 158 |
| MboI | GATC | 1 cut(s) | 156 |
| MboII | GAAGA | 3 cut(s) | 92, 95, 201 |
| MluCI | AATT | 2 cut(s) | 253, 260 |
| MnlI | CCTC | 3 cut(s) | 38, 172, 211 |
| NdeII | GATC | 1 cut(s) | 156 |
| NlaIII | CATG | 2 cut(s) | 26, 119 |
| PagI | TCATGA | 1 cut(s) | 115 |
| PfeI | GAWTC | 1 cut(s) | 47 |
| PkrI | GCNGC | 1 cut(s) | 250 |
| PspPI | GGNCC | 1 cut(s) | 225 |
| RsaI | GTAC | 1 cut(s) | 91 |
| RsaNI | GTAC | 1 cut(s) | 90 |
| SatI | GCNGC | 1 cut(s) | 249 |
| Sau3AI | GATC | 1 cut(s) | 156 |
| Sau96I | GGNCC | 1 cut(s) | 225 |
| SetI | ASST | 3 cut(s) | 91, 170, 222 |
| SgeI | CNNG | 8 cut(s) | 35, 43, 69, 122, 128, 146, 188, 203 |
| SinI | GGWCC | 1 cut(s) | 225 |
| SmlI | CTYRAG | 1 cut(s) | 176 |
| SmoI | CTYRAG | 1 cut(s) | 176 |
| Sse9I | AATT | 2 cut(s) | 253, 260 |
| TaaI | ACNGT | 1 cut(s) | 140 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 2 cut(s) | 253, 260 |
| TfiI | GAWTC | 1 cut(s) | 47 |
| TseI | GCWGC | 1 cut(s) | 248 |
| TspDTI | ATGAA | 4 cut(s) | 60, 61, 132, 195 |
| VpaK11BI | GGWCC | 1 cut(s) | 225 |
| XapI | RAATTY | 2 cut(s) | 253, 260 |
| XmiI | GTMKAC | 1 cut(s) | 284 |