gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 680 |
| AclWI | GGATC | 1 cut(s) | 144 |
| AcsI | RAATTY | 2 cut(s) | 295, 431 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 680 |
| AflII | CTTAAG | 1 cut(s) | 491 |
| AflIII | ACRYGT | 1 cut(s) | 642 |
| AgsI | TTSAA | 6 cut(s) | 151, 280, 293, 365, 458, 733 |
| AhlI | ACTAGT | 1 cut(s) | 95 |
| AluBI | AGCT | 6 cut(s) | 182, 238, 428, 440, 474, 814 |
| AluI | AGCT | 6 cut(s) | 182, 238, 428, 440, 474, 814 |
| Alw26I | GTCTC | 1 cut(s) | 317 |
| AlwI | GGATC | 1 cut(s) | 144 |
| ApeKI | GCWGC | 3 cut(s) | 474, 509, 611 |
| ApoI | RAATTY | 2 cut(s) | 295, 431 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 157, 189 |
| BbsI | GAAGAC | 1 cut(s) | 134 |
| BbvI | GCAGC | 3 cut(s) | 461, 496, 623 |
| BccI | CCATC | 3 cut(s) | 38, 80, 682 |
| BcoDI | GTCTC | 1 cut(s) | 317 |
| BcuI | ACTAGT | 1 cut(s) | 95 |
| BfaI | CTAG | 3 cut(s) | 96, 179, 762 |
| BfmI | CTRYAG | 1 cut(s) | 510 |
| BfrI | CTTAAG | 1 cut(s) | 491 |
| BglII | AGATCT | 1 cut(s) | 418 |
| BisI | GCNGC | 3 cut(s) | 475, 510, 612 |
| BlsI | GCNGC | 3 cut(s) | 476, 511, 613 |
| BmsI | GCATC | 2 cut(s) | 153, 346 |
| BpiI | GAAGAC | 1 cut(s) | 134 |
| BpuEI | CTTGAG | 1 cut(s) | 566 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 680 |
| Bse1I | ACTGG | 1 cut(s) | 745 |
| Bse3DI | GCAATG | 1 cut(s) | 567 |
| BseGI | GGATG | 2 cut(s) | 49, 361 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 680 |
| BseMI | GCAATG | 1 cut(s) | 567 |
| BseMII | CTCAG | 1 cut(s) | 146 |
| BseNI | ACTGG | 1 cut(s) | 745 |
| BseXI | GCAGC | 3 cut(s) | 461, 496, 623 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 680 |
| BsmAI | GTCTC | 1 cut(s) | 317 |
| Bsp143I | GATC | 2 cut(s) | 136, 418 |
| BspCNI | CTCAG | 1 cut(s) | 145 |
| BspMAI | CTGCAG | 1 cut(s) | 514 |
| BspPI | GGATC | 1 cut(s) | 144 |
| BspTI | CTTAAG | 1 cut(s) | 491 |
| BsrDI | GCAATG | 1 cut(s) | 567 |
| BsrI | ACTGG | 1 cut(s) | 745 |
| BssMI | GATC | 2 cut(s) | 136, 418 |
| Bst4CI | ACNGT | 2 cut(s) | 370, 409 |
| Bst6I | CTCTTC | 1 cut(s) | 594 |
| BstAFI | CTTAAG | 1 cut(s) | 491 |
| BstC8I | GCNNGC | 2 cut(s) | 721, 793 |
| BstDEI | CTNAG | 3 cut(s) | 132, 170, 413 |
| BstEII | GGTNACC | 1 cut(s) | 692 |
| BstF5I | GGATG | 2 cut(s) | 49, 361 |
| BstKTI | GATC | 2 cut(s) | 139, 421 |
| BstMAI | GTCTC | 1 cut(s) | 317 |
| BstMBI | GATC | 2 cut(s) | 136, 418 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 566, 716 |
| BstNSI | RCATGY | 1 cut(s) | 646 |
| BstPI | GGTNACC | 1 cut(s) | 692 |
| BstSFI | CTRYAG | 1 cut(s) | 510 |
| BstV1I | GCAGC | 3 cut(s) | 461, 496, 623 |
| BstV2I | GAAGAC | 1 cut(s) | 134 |
| BstX2I | RGATCY | 1 cut(s) | 418 |
| BstYI | RGATCY | 1 cut(s) | 418 |
| BtsCI | GGATG | 2 cut(s) | 49, 361 |
| BtsI | GCAGTG | 1 cut(s) | 555 |
| BtsIMutI | CAGTG | 2 cut(s) | 555, 738 |
| Cac8I | GCNNGC | 2 cut(s) | 721, 793 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 613, 640, 648, 675 |
| CviAII | CATG | 3 cut(s) | 123, 154, 643 |
| DdeI | CTNAG | 3 cut(s) | 132, 170, 413 |
| DpnI | GATC | 2 cut(s) | 138, 420 |
| DpnII | GATC | 2 cut(s) | 136, 418 |
| Eam1104I | CTCTTC | 1 cut(s) | 594 |
| EarI | CTCTTC | 1 cut(s) | 594 |
| Eco91I | GGTNACC | 1 cut(s) | 692 |
| EcoO65I | GGTNACC | 1 cut(s) | 692 |
| FaeI | CATG | 3 cut(s) | 126, 157, 646 |
| FatI | CATG | 3 cut(s) | 122, 153, 642 |
| Fnu4HI | GCNGC | 3 cut(s) | 475, 510, 612 |
| FokI | GGATG | 2 cut(s) | 56, 368 |
| Fsp4HI | GCNGC | 3 cut(s) | 475, 510, 612 |
| FspBI | CTAG | 3 cut(s) | 96, 179, 762 |
| GluI | GCNGC | 3 cut(s) | 475, 510, 612 |
| Hin1II | CATG | 3 cut(s) | 126, 157, 646 |
| HinfI | GANTC | 5 cut(s) | 5, 90, 130, 454, 496 |
| Hpy166II | GTNNAC | 1 cut(s) | 62 |
| Hpy188I | TCNGA | 1 cut(s) | 85 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 332 |
| Hpy8I | GTNNAC | 1 cut(s) | 62 |
| HpyCH4III | ACNGT | 2 cut(s) | 370, 409 |
| HpyCH4V | TGCA | 6 cut(s) | 194, 274, 359, 512, 560, 819 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 566, 716 |
| HpyF3I | CTNAG | 3 cut(s) | 132, 170, 413 |
| Hsp92II | CATG | 3 cut(s) | 126, 157, 646 |
| Kzo9I | GATC | 2 cut(s) | 136, 418 |
| LpnPI | CCDG | 7 cut(s) | 119, 317, 438, 663, 705, 726, 777 |
| Lsp1109I | GCAGC | 3 cut(s) | 461, 496, 623 |
| LweI | GCATC | 2 cut(s) | 153, 346 |
| MaeI | CTAG | 3 cut(s) | 96, 179, 762 |
| MaeIII | GTNAC | 4 cut(s) | 91, 100, 403, 692 |
| MalI | GATC | 2 cut(s) | 138, 420 |
| MboI | GATC | 2 cut(s) | 136, 418 |
| MboII | GAAGA | 7 cut(s) | 5, 139, 139, 281, 413, 581, 584 |
| MfeI | CAATTG | 1 cut(s) | 820 |
| MflI | RGATCY | 1 cut(s) | 418 |
| MluCI | AATT | 7 cut(s) | 295, 345, 431, 464, 602, 796, 820 |
| MlyI | GAGTC | 4 cut(s) | 14, 99, 124, 490 |
| MmeI | TCCRAC | 2 cut(s) | 352, 682 |
| MnlI | CCTC | 8 cut(s) | 11, 91, 115, 186, 294, 385, 561, 597 |
| MseI | TTAA | 5 cut(s) | 492, 503, 621, 648, 747 |
| MslI | CAYNNNNRTG | 1 cut(s) | 560 |
| MspA1I | CMGCKG | 2 cut(s) | 428, 474 |
| MspCI | CTTAAG | 1 cut(s) | 491 |
| MunI | CAATTG | 1 cut(s) | 820 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 566, 716 |
| NdeII | GATC | 2 cut(s) | 136, 418 |
| NlaIII | CATG | 3 cut(s) | 126, 157, 646 |
| NmuCI | GTSAC | 2 cut(s) | 91, 403 |
| NspI | RCATGY | 1 cut(s) | 646 |
| PciI | ACATGT | 1 cut(s) | 642 |
| PfeI | GAWTC | 1 cut(s) | 454 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 680 |
| PkrI | GCNGC | 3 cut(s) | 476, 511, 613 |
| PleI | GAGTC | 4 cut(s) | 13, 98, 124, 490 |
| PpsI | GAGTC | 4 cut(s) | 13, 98, 124, 490 |
| PscI | ACATGT | 1 cut(s) | 642 |
| PspEI | GGTNACC | 1 cut(s) | 692 |
| PstI | CTGCAG | 1 cut(s) | 514 |
| PsuI | RGATCY | 1 cut(s) | 418 |
| PvuII | CAGCTG | 2 cut(s) | 428, 474 |
| RseI | CAYNNNNRTG | 1 cut(s) | 560 |
| SaqAI | TTAA | 5 cut(s) | 492, 503, 621, 648, 747 |
| SatI | GCNGC | 3 cut(s) | 475, 510, 612 |
| Sau3AI | GATC | 2 cut(s) | 136, 418 |
| SchI | GAGTC | 4 cut(s) | 14, 99, 124, 490 |
| SfaNI | GCATC | 2 cut(s) | 153, 346 |
| SfcI | CTRYAG | 1 cut(s) | 510 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 560 |
| SmlI | CTYRAG | 2 cut(s) | 491, 581 |
| SmoI | CTYRAG | 2 cut(s) | 491, 581 |
| SpeI | ACTAGT | 1 cut(s) | 95 |
| Sse9I | AATT | 7 cut(s) | 295, 345, 431, 464, 602, 796, 820 |
| SspMI | CTAG | 3 cut(s) | 96, 179, 762 |
| TaaI | ACNGT | 2 cut(s) | 370, 409 |
| TaqI | TCGA | 1 cut(s) | 16 |
| TasI | AATT | 7 cut(s) | 295, 345, 431, 464, 602, 796, 820 |
| TfiI | GAWTC | 1 cut(s) | 454 |
| Tru1I | TTAA | 5 cut(s) | 492, 503, 621, 648, 747 |
| Tru9I | TTAA | 5 cut(s) | 492, 503, 621, 648, 747 |
| TscAI | CASTG | 2 cut(s) | 562, 745 |
| TseFI | GTSAC | 2 cut(s) | 91, 403 |
| TseI | GCWGC | 3 cut(s) | 474, 509, 611 |
| Tsp45I | GTSAC | 2 cut(s) | 91, 403 |
| TspDTI | ATGAA | 2 cut(s) | 370, 546 |
| TspRI | CASTG | 2 cut(s) | 562, 745 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 680 |
| Vha464I | CTTAAG | 1 cut(s) | 491 |
| XapI | RAATTY | 2 cut(s) | 295, 431 |
| XceI | RCATGY | 1 cut(s) | 646 |
| XspI | CTAG | 3 cut(s) | 96, 179, 762 |