Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 113 |
| AccB1I | GGYRCC | 2 cut(s) | 933, 1009 |
| AccI | GTMKAC | 3 cut(s) | 435, 521, 533 |
| AccII | CGCG | 3 cut(s) | 446, 630, 925 |
| AciI | CCGC | 3 cut(s) | 21, 720, 878 |
| AclI | AACGTT | 1 cut(s) | 322 |
| AclWI | GGATC | 1 cut(s) | 245 |
| AcoI | YGGCCR | 1 cut(s) | 721 |
| AcsI | RAATTY | 2 cut(s) | 939, 1057 |
| AfaI | GTAC | 2 cut(s) | 127, 998 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 749, 809 |
| AgsI | TTSAA | 3 cut(s) | 155, 212, 317 |
| AjnI | CCWGG | 4 cut(s) | 233, 775, 802, 832 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 229, 261 |
| AluBI | AGCT | 5 cut(s) | 50, 64, 172, 358, 705 |
| AluI | AGCT | 5 cut(s) | 50, 64, 172, 358, 705 |
| Alw21I | GWGCWC | 1 cut(s) | 673 |
| Alw26I | GTCTC | 2 cut(s) | 46, 989 |
| AlwI | GGATC | 1 cut(s) | 245 |
| AoxI | GGCC | 3 cut(s) | 3, 506, 721 |
| ApaI | GGGCCC | 1 cut(s) | 510 |
| ApeKI | GCWGC | 6 cut(s) | 23, 26, 355, 380, 702, 850 |
| ApoI | RAATTY | 2 cut(s) | 939, 1057 |
| AseI | ATTAAT | 1 cut(s) | 186 |
| AspLEI | GCGC | 1 cut(s) | 613 |
| AspS9I | GGNCC | 4 cut(s) | 506, 507, 635, 866 |
| AsuHPI | GGTGA | 3 cut(s) | 259, 401, 891 |
| AvaII | GGWCC | 2 cut(s) | 635, 866 |
| BaeGI | GKGCMC | 1 cut(s) | 510 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 117, 150 |
| BanI | GGYRCC | 2 cut(s) | 933, 1009 |
| BanII | GRGCYC | 1 cut(s) | 510 |
| BauI | CACGAG | 1 cut(s) | 384 |
| Bbv12I | GWGCWC | 1 cut(s) | 673 |
| BbvI | GCAGC | 6 cut(s) | 10, 13, 367, 367, 714, 862 |
| BccI | CCATC | 2 cut(s) | 612, 626 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 464, 498, 620, 654 |
| BciT130I | CCWGG | 4 cut(s) | 235, 777, 804, 834 |
| BcoDI | GTCTC | 2 cut(s) | 46, 989 |
| BfaI | CTAG | 2 cut(s) | 855, 888 |
| BfuAI | ACCTGC | 1 cut(s) | 113 |
| BisI | GCNGC | 7 cut(s) | 24, 27, 356, 381, 703, 721, 851 |
| BlsI | GCNGC | 7 cut(s) | 25, 28, 357, 382, 704, 722, 852 |
| Bme1390I | CCNGG | 4 cut(s) | 235, 777, 804, 834 |
| Bme18I | GGWCC | 2 cut(s) | 635, 866 |
| BmgT120I | GGNCC | 4 cut(s) | 506, 507, 635, 866 |
| BmiI | GGNNCC | 5 cut(s) | 508, 841, 867, 935, 1011 |
| BmrFI | CCNGG | 4 cut(s) | 235, 777, 804, 834 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BpuEI | CTTGAG | 4 cut(s) | 30, 97, 522, 593 |
| BsaJI | CCNNGG | 4 cut(s) | 661, 715, 743, 776 |
| BsaWI | WCCGGW | 1 cut(s) | 917 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 121, 151 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 749, 809 |
| Bse1I | ACTGG | 1 cut(s) | 772 |
| Bse3DI | GCAATG | 1 cut(s) | 399 |
| BseBI | CCWGG | 4 cut(s) | 235, 777, 804, 834 |
| BseDI | CCNNGG | 4 cut(s) | 661, 715, 743, 776 |
| BseGI | GGATG | 1 cut(s) | 772 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 749, 809 |
| BseMI | GCAATG | 1 cut(s) | 399 |
| BseNI | ACTGG | 1 cut(s) | 772 |
| BseRI | GAGGAG | 8 cut(s) | 100, 129, 132, 385, 450, 787, 832, 1005 |
| BseSI | GKGCMC | 1 cut(s) | 510 |
| BseXI | GCAGC | 6 cut(s) | 10, 13, 367, 367, 714, 862 |
| Bsh1236I | CGCG | 3 cut(s) | 446, 630, 925 |
| BshFI | GGCC | 3 cut(s) | 5, 508, 723 |
| BshNI | GGYRCC | 2 cut(s) | 933, 1009 |
| BsiHKAI | GWGCWC | 1 cut(s) | 673 |
| BsiSI | CCGG | 1 cut(s) | 918 |
| BsiWI | CGTACG | 1 cut(s) | 996 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 749, 809 |
| BsmAI | GTCTC | 2 cut(s) | 46, 989 |
| BsmBI | CGTCTC | 1 cut(s) | 989 |
| BsmI | GAATGC | 1 cut(s) | 958 |
| BsnI | GGCC | 3 cut(s) | 5, 508, 723 |
| Bsp120I | GGGCCC | 1 cut(s) | 506 |
| Bsp1286I | GDGCHC | 2 cut(s) | 510, 673 |
| Bsp143I | GATC | 4 cut(s) | 67, 237, 475, 568 |
| Bsp19I | CCATGG | 1 cut(s) | 661 |
| Bsp68I | TCGCGA | 1 cut(s) | 630 |
| BspACI | CCGC | 3 cut(s) | 21, 720, 878 |
| BspANI | GGCC | 3 cut(s) | 5, 508, 723 |
| BspFNI | CGCG | 3 cut(s) | 446, 630, 925 |
| BspLI | GGNNCC | 5 cut(s) | 508, 841, 867, 935, 1011 |
| BspMI | ACCTGC | 1 cut(s) | 113 |
| BspPI | GGATC | 1 cut(s) | 245 |
| BspQI | GCTCTTC | 1 cut(s) | 796 |
| BspT107I | GGYRCC | 2 cut(s) | 933, 1009 |
| BsrDI | GCAATG | 1 cut(s) | 399 |
| BsrI | ACTGG | 1 cut(s) | 772 |
| BssECI | CCNNGG | 4 cut(s) | 661, 715, 743, 776 |
| BssMI | GATC | 4 cut(s) | 67, 237, 475, 568 |
| BssSI | CACGAG | 1 cut(s) | 384 |
| BssT1I | CCWWGG | 1 cut(s) | 661 |
| Bst2BI | CACGAG | 1 cut(s) | 384 |
| Bst2UI | CCWGG | 4 cut(s) | 235, 777, 804, 834 |
| Bst4CI | ACNGT | 5 cut(s) | 133, 262, 274, 526, 600 |
| Bst6I | CTCTTC | 5 cut(s) | 13, 377, 468, 796, 850 |
| BstC8I | GCNNGC | 2 cut(s) | 170, 628 |
| BstDEI | CTNAG | 1 cut(s) | 251 |
| BstDSI | CCRYGG | 3 cut(s) | 661, 715, 743 |
| BstF5I | GGATG | 1 cut(s) | 772 |
| BstFNI | CGCG | 3 cut(s) | 446, 630, 925 |
| BstHHI | GCGC | 1 cut(s) | 613 |
| BstKTI | GATC | 4 cut(s) | 70, 240, 478, 571 |
| BstMAI | GTCTC | 2 cut(s) | 46, 989 |
| BstMBI | GATC | 4 cut(s) | 67, 237, 475, 568 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 617 |
| BstNI | CCWGG | 4 cut(s) | 235, 777, 804, 834 |
| BstSCI | CCNGG | 4 cut(s) | 233, 775, 802, 832 |
| BstSLI | GKGCMC | 1 cut(s) | 510 |
| BstUI | CGCG | 3 cut(s) | 446, 630, 925 |
| BstV1I | GCAGC | 6 cut(s) | 10, 13, 367, 367, 714, 862 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 731, 944 |
| BsuRI | GGCC | 3 cut(s) | 5, 508, 723 |
| BtgI | CCRYGG | 3 cut(s) | 661, 715, 743 |
| BtgZI | GCGATG | 2 cut(s) | 645, 662 |
| BtsCI | GGATG | 1 cut(s) | 772 |
| BtsI | GCAGTG | 1 cut(s) | 642 |
| BtsIMutI | CAGTG | 2 cut(s) | 605, 642 |
| BtuMI | TCGCGA | 1 cut(s) | 630 |
| BveI | ACCTGC | 1 cut(s) | 113 |
| Cac8I | GCNNGC | 2 cut(s) | 170, 628 |
| CfoI | GCGC | 1 cut(s) | 613 |
| Cfr13I | GGNCC | 4 cut(s) | 506, 507, 635, 866 |
| CseI | GACGC | 1 cut(s) | 519 |
| Csp6I | GTAC | 2 cut(s) | 126, 997 |
| CviAII | CATG | 4 cut(s) | 617, 662, 680, 1033 |
| CviQI | GTAC | 2 cut(s) | 126, 997 |
| DdeI | CTNAG | 1 cut(s) | 251 |
| DpnI | GATC | 4 cut(s) | 69, 239, 477, 570 |
| DpnII | GATC | 4 cut(s) | 67, 237, 475, 568 |
| EaeI | YGGCCR | 1 cut(s) | 721 |
| Eam1104I | CTCTTC | 5 cut(s) | 13, 377, 468, 796, 850 |
| EarI | CTCTTC | 5 cut(s) | 13, 377, 468, 796, 850 |
| Eco130I | CCWWGG | 1 cut(s) | 661 |
| Eco24I | GRGCYC | 1 cut(s) | 510 |
| Eco47I | GGWCC | 2 cut(s) | 635, 866 |
| EcoO109I | RGGNCCY | 2 cut(s) | 507, 866 |
| EcoRII | CCWGG | 4 cut(s) | 233, 775, 802, 832 |
| EcoT14I | CCWWGG | 1 cut(s) | 661 |
| EcoT38I | GRGCYC | 1 cut(s) | 510 |
| ErhI | CCWWGG | 1 cut(s) | 661 |
| Esp3I | CGTCTC | 1 cut(s) | 989 |
| FaeI | CATG | 4 cut(s) | 620, 665, 683, 1036 |
| FatI | CATG | 4 cut(s) | 616, 661, 679, 1032 |
| FblI | GTMKAC | 3 cut(s) | 435, 521, 533 |
| Fnu4HI | GCNGC | 7 cut(s) | 24, 27, 356, 381, 703, 721, 851 |
| FokI | GGATG | 1 cut(s) | 759 |
| FriOI | GRGCYC | 1 cut(s) | 510 |
| Fsp4HI | GCNGC | 7 cut(s) | 24, 27, 356, 381, 703, 721, 851 |
| FspBI | CTAG | 2 cut(s) | 855, 888 |
| GlaI | GCGC | 1 cut(s) | 612 |
| GluI | GCNGC | 7 cut(s) | 24, 27, 356, 381, 703, 721, 851 |
| HaeIII | GGCC | 3 cut(s) | 5, 508, 723 |
| HapII | CCGG | 1 cut(s) | 918 |
| HgaI | GACGC | 1 cut(s) | 519 |
| HhaI | GCGC | 1 cut(s) | 613 |
| Hin1II | CATG | 4 cut(s) | 620, 665, 683, 1036 |
| Hin6I | GCGC | 1 cut(s) | 611 |
| HinP1I | GCGC | 1 cut(s) | 611 |
| HincII | GTYRAC | 1 cut(s) | 436 |
| HindII | GTYRAC | 1 cut(s) | 436 |
| HindIII | AAGCTT | 2 cut(s) | 62, 170 |
| HinfI | GANTC | 8 cut(s) | 17, 99, 117, 208, 337, 392, 470, 518 |
| HpaII | CCGG | 1 cut(s) | 918 |
| HphI | GGTGA | 3 cut(s) | 259, 401, 891 |
| Hpy166II | GTNNAC | 5 cut(s) | 368, 436, 522, 534, 947 |
| Hpy188I | TCNGA | 3 cut(s) | 336, 348, 475 |
| Hpy188III | TCNNGA | 6 cut(s) | 114, 152, 314, 467, 572, 629 |
| Hpy8I | GTNNAC | 5 cut(s) | 368, 436, 522, 534, 947 |
| Hpy99I | CGWCG | 1 cut(s) | 137 |
| HpyAV | CCTTC | 2 cut(s) | 912, 995 |
| HpyCH4III | ACNGT | 5 cut(s) | 133, 262, 274, 526, 600 |
| HpyCH4IV | ACGT | 2 cut(s) | 322, 949 |
| HpyCH4V | TGCA | 1 cut(s) | 355 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 617 |
| HpyF3I | CTNAG | 1 cut(s) | 251 |
| HpySE526I | ACGT | 2 cut(s) | 322, 949 |
| Hsp92II | CATG | 4 cut(s) | 620, 665, 683, 1036 |
| HspAI | GCGC | 1 cut(s) | 611 |
| Kzo9I | GATC | 4 cut(s) | 67, 237, 475, 568 |
| LguI | GCTCTTC | 1 cut(s) | 796 |
| LmnI | GCTCC | 5 cut(s) | 142, 618, 745, 845, 889 |
| Lsp1109I | GCAGC | 6 cut(s) | 10, 13, 367, 367, 714, 862 |
| LweI | GCATC | 1 cut(s) | 169 |
| MaeI | CTAG | 2 cut(s) | 855, 888 |
| MaeII | ACGT | 2 cut(s) | 322, 949 |
| MaeIII | GTNAC | 3 cut(s) | 274, 389, 1040 |
| MalI | GATC | 4 cut(s) | 69, 239, 477, 570 |
| MboI | GATC | 4 cut(s) | 67, 237, 475, 568 |
| MfeI | CAATTG | 1 cut(s) | 221 |
| MhlI | GDGCHC | 2 cut(s) | 510, 673 |
| MluCI | AATT | 3 cut(s) | 221, 939, 1057 |
| MlyI | GAGTC | 4 cut(s) | 126, 386, 464, 527 |
| MseI | TTAA | 3 cut(s) | 186, 1061, 1072 |
| MslI | CAYNNNNRTG | 3 cut(s) | 647, 666, 729 |
| MspA1I | CMGCKG | 1 cut(s) | 23 |
| MspI | CCGG | 1 cut(s) | 918 |
| MspR9I | CCNGG | 4 cut(s) | 235, 777, 804, 834 |
| MunI | CAATTG | 1 cut(s) | 221 |
| Mva1269I | GAATGC | 1 cut(s) | 958 |
| MvaI | CCWGG | 4 cut(s) | 235, 777, 804, 834 |
| MvnI | CGCG | 3 cut(s) | 446, 630, 925 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 617 |
| NcoI | CCATGG | 1 cut(s) | 661 |
| NdeII | GATC | 4 cut(s) | 67, 237, 475, 568 |
| NlaIII | CATG | 4 cut(s) | 620, 665, 683, 1036 |
| NlaIV | GGNNCC | 5 cut(s) | 508, 841, 867, 935, 1011 |
| NmuCI | GTSAC | 2 cut(s) | 274, 389 |
| NruI | TCGCGA | 1 cut(s) | 630 |
| PciSI | GCTCTTC | 1 cut(s) | 796 |
| PctI | GAATGC | 1 cut(s) | 958 |
| PfeI | GAWTC | 4 cut(s) | 17, 99, 208, 337 |
| Pfl23II | CGTACG | 1 cut(s) | 996 |
| PflFI | GACNNNGTC | 1 cut(s) | 419 |
| PfoI | TCCNGGA | 1 cut(s) | 233 |
| PkrI | GCNGC | 7 cut(s) | 25, 28, 357, 382, 704, 722, 852 |
| PleI | GAGTC | 4 cut(s) | 125, 386, 464, 526 |
| PpsI | GAGTC | 4 cut(s) | 125, 386, 464, 526 |
| PpuMI | RGGWCCY | 1 cut(s) | 866 |
| PshBI | ATTAAT | 1 cut(s) | 186 |
| Psp1406I | AACGTT | 1 cut(s) | 322 |
| Psp5II | RGGWCCY | 1 cut(s) | 866 |
| Psp6I | CCWGG | 4 cut(s) | 233, 775, 802, 832 |
| PspGI | CCWGG | 4 cut(s) | 233, 775, 802, 832 |
| PspLI | CGTACG | 1 cut(s) | 996 |
| PspN4I | GGNNCC | 5 cut(s) | 508, 841, 867, 935, 1011 |
| PspOMI | GGGCCC | 1 cut(s) | 506 |
| PspPI | GGNCC | 4 cut(s) | 506, 507, 635, 866 |
| PspPPI | RGGWCCY | 1 cut(s) | 866 |
| PsyI | GACNNNGTC | 1 cut(s) | 419 |
| RruI | TCGCGA | 1 cut(s) | 630 |
| RsaI | GTAC | 2 cut(s) | 127, 998 |
| RsaNI | GTAC | 2 cut(s) | 126, 997 |
| RseI | CAYNNNNRTG | 3 cut(s) | 647, 666, 729 |
| SalI | GTCGAC | 1 cut(s) | 434 |
| SapI | GCTCTTC | 1 cut(s) | 796 |
| SaqAI | TTAA | 3 cut(s) | 186, 1061, 1072 |
| SatI | GCNGC | 7 cut(s) | 24, 27, 356, 381, 703, 721, 851 |
| Sau3AI | GATC | 4 cut(s) | 67, 237, 475, 568 |
| Sau96I | GGNCC | 4 cut(s) | 506, 507, 635, 866 |
| SchI | GAGTC | 4 cut(s) | 126, 386, 464, 527 |
| ScrFI | CCNGG | 4 cut(s) | 235, 777, 804, 834 |
| SduI | GDGCHC | 2 cut(s) | 510, 673 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| SinI | GGWCC | 2 cut(s) | 635, 866 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 647, 666, 729 |
| SmlI | CTYRAG | 4 cut(s) | 45, 112, 537, 572 |
| SmoI | CTYRAG | 4 cut(s) | 45, 112, 537, 572 |
| Sse9I | AATT | 3 cut(s) | 221, 939, 1057 |
| SsiI | CCGC | 3 cut(s) | 21, 720, 878 |
| SspMI | CTAG | 2 cut(s) | 855, 888 |
| StyD4I | CCNGG | 4 cut(s) | 233, 775, 802, 832 |
| StyI | CCWWGG | 1 cut(s) | 661 |
| TaaI | ACNGT | 5 cut(s) | 133, 262, 274, 526, 600 |
| TaiI | ACGT | 2 cut(s) | 325, 952 |
| TaqI | TCGA | 1 cut(s) | 435 |
| TasI | AATT | 3 cut(s) | 221, 939, 1057 |
| TauI | GCSGC | 1 cut(s) | 723 |
| TfiI | GAWTC | 4 cut(s) | 17, 99, 208, 337 |
| Tru1I | TTAA | 3 cut(s) | 186, 1061, 1072 |
| Tru9I | TTAA | 3 cut(s) | 186, 1061, 1072 |
| TscAI | CASTG | 2 cut(s) | 605, 649 |
| TseFI | GTSAC | 2 cut(s) | 274, 389 |
| TseI | GCWGC | 6 cut(s) | 23, 26, 355, 380, 702, 850 |
| Tsp45I | GTSAC | 2 cut(s) | 274, 389 |
| TspDTI | ATGAA | 2 cut(s) | 44, 509 |
| TspGWI | ACGGA | 2 cut(s) | 704, 732 |
| TspRI | CASTG | 2 cut(s) | 605, 649 |
| Tth111I | GACNNNGTC | 1 cut(s) | 419 |
| VpaK11BI | GGWCC | 2 cut(s) | 635, 866 |
| VspI | ATTAAT | 1 cut(s) | 186 |
| XapI | RAATTY | 2 cut(s) | 939, 1057 |
| XmiI | GTMKAC | 3 cut(s) | 435, 521, 533 |
| XspI | CTAG | 2 cut(s) | 855, 888 |