gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 277 |
| AclWI | GGATC | 3 cut(s) | 33, 55, 144 |
| AcsI | RAATTY | 1 cut(s) | 242 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AfaI | GTAC | 2 cut(s) | 75, 301 |
| AgsI | TTSAA | 2 cut(s) | 235, 311 |
| AjnI | CCWGG | 1 cut(s) | 21 |
| AluBI | AGCT | 1 cut(s) | 238 |
| AluI | AGCT | 1 cut(s) | 238 |
| AlwI | GGATC | 3 cut(s) | 33, 55, 144 |
| AoxI | GGCC | 1 cut(s) | 19 |
| ApeKI | GCWGC | 2 cut(s) | 80, 248 |
| ApoI | RAATTY | 1 cut(s) | 242 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 157, 189 |
| AsuHPI | GGTGA | 1 cut(s) | 328 |
| BbvI | GCAGC | 2 cut(s) | 67, 260 |
| BccI | CCATC | 2 cut(s) | 38, 151 |
| BciT130I | CCWGG | 1 cut(s) | 23 |
| BfmI | CTRYAG | 1 cut(s) | 177 |
| BfuAI | ACCTGC | 1 cut(s) | 277 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 283 |
| BisI | GCNGC | 2 cut(s) | 81, 249 |
| BlsI | GCNGC | 2 cut(s) | 82, 250 |
| Bme1390I | CCNGG | 1 cut(s) | 23 |
| BmrFI | CCNGG | 1 cut(s) | 23 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BseBI | CCWGG | 1 cut(s) | 23 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseXI | GCAGC | 2 cut(s) | 67, 260 |
| BsgI | GTGCAG | 1 cut(s) | 213 |
| BshFI | GGCC | 1 cut(s) | 21 |
| BsnI | GGCC | 1 cut(s) | 21 |
| Bsp1407I | TGTACA | 1 cut(s) | 299 |
| Bsp143I | GATC | 3 cut(s) | 25, 47, 136 |
| BspANI | GGCC | 1 cut(s) | 21 |
| BspMI | ACCTGC | 1 cut(s) | 277 |
| BspPI | GGATC | 3 cut(s) | 33, 55, 144 |
| BsrGI | TGTACA | 1 cut(s) | 299 |
| BssMI | GATC | 3 cut(s) | 25, 47, 136 |
| Bst2UI | CCWGG | 1 cut(s) | 23 |
| Bst4CI | ACNGT | 1 cut(s) | 304 |
| BstAUI | TGTACA | 1 cut(s) | 299 |
| BstDEI | CTNAG | 2 cut(s) | 14, 132 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstKTI | GATC | 3 cut(s) | 28, 50, 139 |
| BstMBI | GATC | 3 cut(s) | 25, 47, 136 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 283 |
| BstNI | CCWGG | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 21 |
| BstSFI | CTRYAG | 1 cut(s) | 177 |
| BstV1I | GCAGC | 2 cut(s) | 67, 260 |
| BstX2I | RGATCY | 2 cut(s) | 25, 47 |
| BstYI | RGATCY | 2 cut(s) | 25, 47 |
| BsuRI | GGCC | 1 cut(s) | 21 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| BveI | ACCTGC | 1 cut(s) | 277 |
| Csp6I | GTAC | 2 cut(s) | 74, 300 |
| CviAII | CATG | 2 cut(s) | 57, 184 |
| CviJI | RGCY | 4 cut(s) | 21, 182, 238, 277 |
| CviKI_1 | RGCY | 4 cut(s) | 21, 182, 238, 277 |
| CviQI | GTAC | 2 cut(s) | 74, 300 |
| DdeI | CTNAG | 2 cut(s) | 14, 132 |
| DpnI | GATC | 3 cut(s) | 27, 49, 138 |
| DpnII | GATC | 3 cut(s) | 25, 47, 136 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| EcoRII | CCWGG | 1 cut(s) | 21 |
| FaeI | CATG | 2 cut(s) | 60, 187 |
| FaiI | YATR | 3 cut(s) | 58, 117, 185 |
| FatI | CATG | 2 cut(s) | 56, 183 |
| Fnu4HI | GCNGC | 2 cut(s) | 81, 249 |
| FokI | GGATG | 1 cut(s) | 56 |
| Fsp4HI | GCNGC | 2 cut(s) | 81, 249 |
| GluI | GCNGC | 2 cut(s) | 81, 249 |
| HaeIII | GGCC | 1 cut(s) | 21 |
| Hin1II | CATG | 2 cut(s) | 60, 187 |
| HinfI | GANTC | 2 cut(s) | 5, 90 |
| HphI | GGTGA | 1 cut(s) | 328 |
| Hpy166II | GTNNAC | 1 cut(s) | 62 |
| Hpy188I | TCNGA | 1 cut(s) | 141 |
| Hpy8I | GTNNAC | 1 cut(s) | 62 |
| HpyCH4III | ACNGT | 1 cut(s) | 304 |
| HpyCH4V | TGCA | 2 cut(s) | 194, 248 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 283 |
| HpyF3I | CTNAG | 2 cut(s) | 14, 132 |
| Hsp92II | CATG | 2 cut(s) | 60, 187 |
| Kzo9I | GATC | 3 cut(s) | 25, 47, 136 |
| LpnPI | CCDG | 5 cut(s) | 8, 35, 189, 202, 272 |
| Lsp1109I | GCAGC | 2 cut(s) | 67, 260 |
| LweI | GCATC | 1 cut(s) | 108 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 3 cut(s) | 27, 49, 138 |
| MboI | GATC | 3 cut(s) | 25, 47, 136 |
| MboII | GAAGA | 1 cut(s) | 263 |
| MflI | RGATCY | 2 cut(s) | 25, 47 |
| MluCI | AATT | 1 cut(s) | 242 |
| MlyI | GAGTC | 2 cut(s) | 14, 99 |
| MnlI | CCTC | 2 cut(s) | 11, 312 |
| MseI | TTAA | 1 cut(s) | 170 |
| MspR9I | CCNGG | 1 cut(s) | 23 |
| MvaI | CCWGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 283 |
| NdeII | GATC | 3 cut(s) | 25, 47, 136 |
| NlaIII | CATG | 2 cut(s) | 60, 187 |
| NmuCI | GTSAC | 1 cut(s) | 91 |
| PflFI | GACNNNGTC | 1 cut(s) | 89 |
| PkrI | GCNGC | 2 cut(s) | 82, 250 |
| PleI | GAGTC | 2 cut(s) | 13, 98 |
| PpsI | GAGTC | 2 cut(s) | 13, 98 |
| Psp6I | CCWGG | 1 cut(s) | 21 |
| PspGI | CCWGG | 1 cut(s) | 21 |
| PsuI | RGATCY | 2 cut(s) | 25, 47 |
| PsyI | GACNNNGTC | 1 cut(s) | 89 |
| RsaI | GTAC | 2 cut(s) | 75, 301 |
| RsaNI | GTAC | 2 cut(s) | 74, 300 |
| SaqAI | TTAA | 1 cut(s) | 170 |
| SatI | GCNGC | 2 cut(s) | 81, 249 |
| Sau3AI | GATC | 3 cut(s) | 25, 47, 136 |
| SchI | GAGTC | 2 cut(s) | 14, 99 |
| ScrFI | CCNGG | 1 cut(s) | 23 |
| SetI | ASST | 5 cut(s) | 191, 240, 291, 318, 328 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SfcI | CTRYAG | 1 cut(s) | 177 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SspI | AATATT | 1 cut(s) | 268 |
| StyD4I | CCNGG | 1 cut(s) | 21 |
| TaaI | ACNGT | 1 cut(s) | 304 |
| TasI | AATT | 1 cut(s) | 242 |
| TatI | WGTACW | 2 cut(s) | 73, 299 |
| Tru1I | TTAA | 1 cut(s) | 170 |
| Tru9I | TTAA | 1 cut(s) | 170 |
| TseFI | GTSAC | 1 cut(s) | 91 |
| TseI | GCWGC | 2 cut(s) | 80, 248 |
| Tsp45I | GTSAC | 1 cut(s) | 91 |
| TspGWI | ACGGA | 1 cut(s) | 102 |
| Tth111I | GACNNNGTC | 1 cut(s) | 89 |
| XapI | RAATTY | 1 cut(s) | 242 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 29 |