lipid metabolic process
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 33 - 207 | 3.5e-20 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 455 |
| Acc65I | GGTACC | 1 cut(s) | 1038 |
| AccB1I | GGYRCC | 4 cut(s) | 401, 924, 1038, 1052 |
| AccBSI | CCGCTC | 1 cut(s) | 650 |
| AccII | CGCG | 3 cut(s) | 757, 881, 883 |
| AclWI | GGATC | 4 cut(s) | 188, 237, 396, 1022 |
| AcoI | YGGCCR | 5 cut(s) | 175, 642, 664, 712, 733 |
| AcyI | GRCGYC | 1 cut(s) | 450 |
| AfaI | GTAC | 1 cut(s) | 1040 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 692, 803, 1007, 1049, 1104, 1158 |
| AgsI | TTSAA | 2 cut(s) | 329, 658 |
| AjnI | CCWGG | 4 cut(s) | 384, 748, 802, 850 |
| AleI | CACNNNNGTG | 1 cut(s) | 922 |
| AluBI | AGCT | 6 cut(s) | 42, 146, 382, 583, 891, 914 |
| AluI | AGCT | 6 cut(s) | 42, 146, 382, 583, 891, 914 |
| Alw21I | GWGCWC | 1 cut(s) | 893 |
| Alw26I | GTCTC | 3 cut(s) | 463, 701, 804 |
| AlwI | GGATC | 4 cut(s) | 188, 237, 396, 1022 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 385 |
| ApaI | GGGCCC | 1 cut(s) | 1164 |
| ApeKI | GCWGC | 3 cut(s) | 379, 832, 1022 |
| AseI | ATTAAT | 1 cut(s) | 465 |
| Asp718I | GGTACC | 1 cut(s) | 1038 |
| AspLEI | GCGC | 3 cut(s) | 757, 850, 883 |
| AspS9I | GGNCC | 9 cut(s) | 121, 518, 854, 876, 908, 983, 1106, 1160, 1161 |
| AsuC2I | CCSGG | 2 cut(s) | 1043, 1159 |
| AsuHPI | GGTGA | 1 cut(s) | 541 |
| BaeGI | GKGCMC | 3 cut(s) | 592, 929, 1164 |
| BalI | TGGCCA | 2 cut(s) | 177, 666 |
| BanI | GGYRCC | 4 cut(s) | 401, 924, 1038, 1052 |
| BanII | GRGCYC | 3 cut(s) | 893, 957, 1164 |
| Bbv12I | GWGCWC | 1 cut(s) | 893 |
| BbvCI | CCTCAGC | 1 cut(s) | 771 |
| BbvI | GCAGC | 3 cut(s) | 391, 819, 1009 |
| BccI | CCATC | 3 cut(s) | 125, 675, 978 |
| BceAI | ACGGC | 1 cut(s) | 699 |
| BciT130I | CCWGG | 4 cut(s) | 386, 750, 804, 852 |
| BciVI | GTATCC | 2 cut(s) | 214, 1039 |
| BcnI | CCSGG | 2 cut(s) | 1043, 1159 |
| BcoDI | GTCTC | 3 cut(s) | 463, 701, 804 |
| BfaI | CTAG | 1 cut(s) | 357 |
| BfmI | CTRYAG | 1 cut(s) | 1023 |
| BfuI | GTATCC | 2 cut(s) | 214, 1039 |
| BisI | GCNGC | 6 cut(s) | 380, 682, 785, 833, 879, 1023 |
| BlsI | GCNGC | 6 cut(s) | 381, 683, 786, 834, 880, 1024 |
| Bme1390I | CCNGG | 6 cut(s) | 386, 750, 804, 852, 1043, 1159 |
| BmgT120I | GGNCC | 9 cut(s) | 121, 518, 854, 876, 908, 983, 1106, 1160, 1161 |
| BmiI | GGNNCC | 8 cut(s) | 122, 136, 403, 926, 956, 1040, 1054, 1162 |
| BmrFI | CCNGG | 6 cut(s) | 386, 750, 804, 852, 1043, 1159 |
| BmsI | GCATC | 4 cut(s) | 282, 598, 603, 796 |
| BpmI | CTGGAG | 2 cut(s) | 786, 925 |
| Bpu10I | CCTNAGC | 1 cut(s) | 771 |
| BpuMI | CCSGG | 2 cut(s) | 1043, 1159 |
| Bsa29I | ATCGAT | 1 cut(s) | 440 |
| BsaHI | GRCGYC | 1 cut(s) | 450 |
| BsaI | GGTCTC | 2 cut(s) | 463, 701 |
| BsaJI | CCNNGG | 4 cut(s) | 306, 453, 508, 851 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 692, 803, 1007, 1049, 1104, 1158 |
| Bse118I | RCCGGY | 1 cut(s) | 692 |
| Bse1I | ACTGG | 2 cut(s) | 736, 942 |
| Bse3DI | GCAATG | 1 cut(s) | 495 |
| BseBI | CCWGG | 4 cut(s) | 386, 750, 804, 852 |
| BseCI | ATCGAT | 1 cut(s) | 440 |
| BseDI | CCNNGG | 4 cut(s) | 306, 453, 508, 851 |
| BseGI | GGATG | 2 cut(s) | 594, 667 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 692, 803, 1007, 1049, 1104, 1158 |
| BseMI | GCAATG | 1 cut(s) | 495 |
| BseMII | CTCAG | 1 cut(s) | 785 |
| BseNI | ACTGG | 2 cut(s) | 736, 942 |
| BseRI | GAGGAG | 2 cut(s) | 4, 138 |
| BseSI | GKGCMC | 3 cut(s) | 592, 929, 1164 |
| BseX3I | CGGCCG | 1 cut(s) | 712 |
| BseXI | GCAGC | 3 cut(s) | 391, 819, 1009 |
| BseYI | CCCAGC | 1 cut(s) | 1007 |
| BsgI | GTGCAG | 1 cut(s) | 398 |
| Bsh1236I | CGCG | 3 cut(s) | 757, 881, 883 |
| Bsh1285I | CGRYCG | 1 cut(s) | 715 |
| BshNI | GGYRCC | 4 cut(s) | 401, 924, 1038, 1052 |
| BshVI | ATCGAT | 1 cut(s) | 440 |
| BsiEI | CGRYCG | 1 cut(s) | 715 |
| BsiHKAI | GWGCWC | 1 cut(s) | 893 |
| BsiSI | CCGG | 5 cut(s) | 693, 711, 981, 1043, 1158 |
| BslFI | GGGAC | 3 cut(s) | 332, 702, 1148 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 692, 803, 1007, 1049, 1104, 1158 |
| BsmAI | GTCTC | 3 cut(s) | 463, 701, 804 |
| BsmBI | CGTCTC | 1 cut(s) | 804 |
| BsmFI | GGGAC | 3 cut(s) | 332, 702, 1148 |
| Bso31I | GGTCTC | 2 cut(s) | 463, 701 |
| Bsp120I | GGGCCC | 1 cut(s) | 1160 |
| Bsp1286I | GDGCHC | 5 cut(s) | 592, 893, 929, 957, 1164 |
| Bsp143I | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| Bsp19I | CCATGG | 1 cut(s) | 508 |
| BspCNI | CTCAG | 1 cut(s) | 784 |
| BspDI | ATCGAT | 1 cut(s) | 440 |
| BspFNI | CGCG | 3 cut(s) | 757, 881, 883 |
| BspLI | GGNNCC | 8 cut(s) | 122, 136, 403, 926, 956, 1040, 1054, 1162 |
| BspMAI | CTGCAG | 1 cut(s) | 1027 |
| BspPI | GGATC | 4 cut(s) | 188, 237, 396, 1022 |
| BspT107I | GGYRCC | 4 cut(s) | 401, 924, 1038, 1052 |
| BspTNI | GGTCTC | 2 cut(s) | 463, 701 |
| BsrBI | CCGCTC | 1 cut(s) | 650 |
| BsrDI | GCAATG | 1 cut(s) | 495 |
| BsrFI | RCCGGY | 1 cut(s) | 692 |
| BsrI | ACTGG | 2 cut(s) | 736, 942 |
| BssAI | RCCGGY | 1 cut(s) | 692 |
| BssECI | CCNNGG | 4 cut(s) | 306, 453, 508, 851 |
| BssMI | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| BssNI | GRCGYC | 1 cut(s) | 450 |
| BssT1I | CCWWGG | 3 cut(s) | 306, 453, 508 |
| Bst2UI | CCWGG | 4 cut(s) | 386, 750, 804, 852 |
| Bst4CI | ACNGT | 2 cut(s) | 798, 994 |
| Bst6I | CTCTTC | 1 cut(s) | 659 |
| BstACI | GRCGYC | 1 cut(s) | 450 |
| BstC8I | GCNNGC | 3 cut(s) | 40, 592, 912 |
| BstDEI | CTNAG | 1 cut(s) | 771 |
| BstDSI | CCRYGG | 1 cut(s) | 508 |
| BstF5I | GGATG | 2 cut(s) | 594, 667 |
| BstFNI | CGCG | 3 cut(s) | 757, 881, 883 |
| BstHHI | GCGC | 3 cut(s) | 757, 850, 883 |
| BstKTI | GATC | 4 cut(s) | 196, 232, 391, 1030 |
| BstMAI | GTCTC | 3 cut(s) | 463, 701, 804 |
| BstMBI | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| BstMCI | CGRYCG | 1 cut(s) | 715 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 330, 741, 781, 878, 907, 1004 |
| BstNI | CCWGG | 4 cut(s) | 386, 750, 804, 852 |
| BstNSI | RCATGY | 1 cut(s) | 848 |
| BstSCI | CCNGG | 6 cut(s) | 384, 748, 802, 850, 1041, 1157 |
| BstSFI | CTRYAG | 1 cut(s) | 1023 |
| BstSLI | GKGCMC | 3 cut(s) | 592, 929, 1164 |
| BstUI | CGCG | 3 cut(s) | 757, 881, 883 |
| BstV1I | GCAGC | 3 cut(s) | 391, 819, 1009 |
| BstX2I | RGATCY | 3 cut(s) | 193, 388, 1027 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 131, 515, 731 |
| BstYI | RGATCY | 3 cut(s) | 193, 388, 1027 |
| BstZI | CGGCCG | 1 cut(s) | 712 |
| Bsu15I | ATCGAT | 1 cut(s) | 440 |
| BsuI | GTATCC | 2 cut(s) | 214, 1039 |
| BsuTUI | ATCGAT | 1 cut(s) | 440 |
| BtgI | CCRYGG | 1 cut(s) | 508 |
| BtgZI | GCGATG | 1 cut(s) | 259 |
| BtsCI | GGATG | 2 cut(s) | 594, 667 |
| BtsI | GCAGTG | 1 cut(s) | 540 |
| BtsIMutI | CAGTG | 3 cut(s) | 540, 729, 990 |
| Cac8I | GCNNGC | 3 cut(s) | 40, 592, 912 |
| CaiI | CAGNNNCTG | 1 cut(s) | 385 |
| CfoI | GCGC | 3 cut(s) | 757, 850, 883 |
| Cfr10I | RCCGGY | 1 cut(s) | 692 |
| Cfr13I | GGNCC | 9 cut(s) | 121, 518, 854, 876, 908, 983, 1106, 1160, 1161 |
| ClaI | ATCGAT | 1 cut(s) | 440 |
| CseI | GACGC | 2 cut(s) | 458, 872 |
| CsiI | ACCWGGT | 1 cut(s) | 748 |
| Csp6I | GTAC | 1 cut(s) | 1039 |
| CviQI | GTAC | 1 cut(s) | 1039 |
| DdeI | CTNAG | 1 cut(s) | 771 |
| DpnI | GATC | 4 cut(s) | 195, 231, 390, 1029 |
| DpnII | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 455 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 455 |
| EaeI | YGGCCR | 5 cut(s) | 175, 642, 664, 712, 733 |
| EagI | CGGCCG | 1 cut(s) | 712 |
| Eam1104I | CTCTTC | 1 cut(s) | 659 |
| EarI | CTCTTC | 1 cut(s) | 659 |
| EciI | GGCGGA | 2 cut(s) | 416, 679 |
| Ecl136II | GAGCTC | 1 cut(s) | 891 |
| EclXI | CGGCCG | 1 cut(s) | 712 |
| Eco130I | CCWWGG | 3 cut(s) | 306, 453, 508 |
| Eco24I | GRGCYC | 3 cut(s) | 893, 957, 1164 |
| Eco31I | GGTCTC | 2 cut(s) | 463, 701 |
| Eco52I | CGGCCG | 1 cut(s) | 712 |
| Eco53kI | GAGCTC | 1 cut(s) | 891 |
| EcoICRI | GAGCTC | 1 cut(s) | 891 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1161 |
| EcoRII | CCWGG | 4 cut(s) | 384, 748, 802, 850 |
| EcoT14I | CCWWGG | 3 cut(s) | 306, 453, 508 |
| EcoT38I | GRGCYC | 3 cut(s) | 893, 957, 1164 |
| ErhI | CCWWGG | 3 cut(s) | 306, 453, 508 |
| Esp3I | CGTCTC | 1 cut(s) | 804 |
| FaqI | GGGAC | 3 cut(s) | 332, 702, 1148 |
| FauI | CCCGC | 1 cut(s) | 599 |
| Fnu4HI | GCNGC | 6 cut(s) | 380, 682, 785, 833, 879, 1023 |
| FokI | GGATG | 2 cut(s) | 581, 654 |
| FriOI | GRGCYC | 3 cut(s) | 893, 957, 1164 |
| Fsp4HI | GCNGC | 6 cut(s) | 380, 682, 785, 833, 879, 1023 |
| FspBI | CTAG | 1 cut(s) | 357 |
| GlaI | GCGC | 3 cut(s) | 756, 849, 882 |
| GluI | GCNGC | 6 cut(s) | 380, 682, 785, 833, 879, 1023 |
| GsaI | CCCAGC | 1 cut(s) | 1011 |
| GsuI | CTGGAG | 2 cut(s) | 786, 925 |
| HapII | CCGG | 5 cut(s) | 693, 711, 981, 1043, 1158 |
| HgaI | GACGC | 2 cut(s) | 458, 872 |
| HhaI | GCGC | 3 cut(s) | 757, 850, 883 |
| Hin1I | GRCGYC | 1 cut(s) | 450 |
| Hin6I | GCGC | 3 cut(s) | 755, 848, 881 |
| HinP1I | GCGC | 3 cut(s) | 755, 848, 881 |
| HincII | GTYRAC | 3 cut(s) | 415, 947, 1084 |
| HindII | GTYRAC | 3 cut(s) | 415, 947, 1084 |
| HinfI | GANTC | 2 cut(s) | 619, 1136 |
| HpaII | CCGG | 5 cut(s) | 693, 711, 981, 1043, 1158 |
| HphI | GGTGA | 1 cut(s) | 541 |
| Hpy166II | GTNNAC | 3 cut(s) | 415, 947, 1084 |
| Hpy188I | TCNGA | 3 cut(s) | 481, 631, 888 |
| Hpy188III | TCNNGA | 1 cut(s) | 569 |
| Hpy8I | GTNNAC | 3 cut(s) | 415, 947, 1084 |
| HpyAV | CCTTC | 4 cut(s) | 33, 681, 730, 775 |
| HpyCH4III | ACNGT | 2 cut(s) | 798, 994 |
| HpyCH4IV | ACGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 4 cut(s) | 379, 835, 872, 1025 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 330, 741, 781, 878, 907, 1004 |
| HpyF3I | CTNAG | 1 cut(s) | 771 |
| HpySE526I | ACGT | 1 cut(s) | 154 |
| Hsp92I | GRCGYC | 1 cut(s) | 450 |
| HspAI | GCGC | 3 cut(s) | 755, 848, 881 |
| KpnI | GGTACC | 1 cut(s) | 1042 |
| Kzo9I | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| LmnI | GCTCC | 7 cut(s) | 140, 151, 387, 580, 919, 960, 1003 |
| Lsp1109I | GCAGC | 3 cut(s) | 391, 819, 1009 |
| LweI | GCATC | 4 cut(s) | 282, 598, 603, 796 |
| MabI | ACCWGGT | 1 cut(s) | 748 |
| MaeI | CTAG | 1 cut(s) | 357 |
| MaeII | ACGT | 1 cut(s) | 154 |
| MaeIII | GTNAC | 3 cut(s) | 813, 935, 1127 |
| MalI | GATC | 4 cut(s) | 195, 231, 390, 1029 |
| MbiI | CCGCTC | 1 cut(s) | 650 |
| MboI | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| MboII | GAAGA | 3 cut(s) | 497, 646, 753 |
| MfeI | CAATTG | 1 cut(s) | 931 |
| MflI | RGATCY | 3 cut(s) | 193, 388, 1027 |
| MhlI | GDGCHC | 5 cut(s) | 592, 893, 929, 957, 1164 |
| MlsI | TGGCCA | 2 cut(s) | 177, 666 |
| MluCI | AATT | 2 cut(s) | 64, 931 |
| MluNI | TGGCCA | 2 cut(s) | 177, 666 |
| MlyI | GAGTC | 2 cut(s) | 613, 1130 |
| Mox20I | TGGCCA | 2 cut(s) | 177, 666 |
| MscI | TGGCCA | 2 cut(s) | 177, 666 |
| MseI | TTAA | 3 cut(s) | 102, 236, 465 |
| MslI | CAYNNNNRTG | 3 cut(s) | 129, 843, 922 |
| Msp20I | TGGCCA | 2 cut(s) | 177, 666 |
| MspI | CCGG | 5 cut(s) | 693, 711, 981, 1043, 1158 |
| MspR9I | CCNGG | 6 cut(s) | 386, 750, 804, 852, 1043, 1159 |
| MunI | CAATTG | 1 cut(s) | 931 |
| MvaI | CCWGG | 4 cut(s) | 386, 750, 804, 852 |
| MvnI | CGCG | 3 cut(s) | 757, 881, 883 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 330, 741, 781, 878, 907, 1004 |
| NciI | CCSGG | 2 cut(s) | 1043, 1159 |
| NcoI | CCATGG | 1 cut(s) | 508 |
| NdeII | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| NlaIV | GGNNCC | 8 cut(s) | 122, 136, 403, 926, 956, 1040, 1054, 1162 |
| NmeAIII | GCCGAG | 1 cut(s) | 620 |
| NmuCI | GTSAC | 2 cut(s) | 813, 935 |
| NspI | RCATGY | 1 cut(s) | 848 |
| OliI | CACNNNNGTG | 1 cut(s) | 922 |
| PfoI | TCCNGGA | 1 cut(s) | 384 |
| PkrI | GCNGC | 6 cut(s) | 381, 683, 786, 834, 880, 1024 |
| PleI | GAGTC | 2 cut(s) | 613, 1130 |
| PpsI | GAGTC | 2 cut(s) | 613, 1130 |
| PshBI | ATTAAT | 1 cut(s) | 465 |
| Psp124BI | GAGCTC | 1 cut(s) | 893 |
| Psp6I | CCWGG | 4 cut(s) | 384, 748, 802, 850 |
| PspFI | CCCAGC | 1 cut(s) | 1007 |
| PspGI | CCWGG | 4 cut(s) | 384, 748, 802, 850 |
| PspN4I | GGNNCC | 8 cut(s) | 122, 136, 403, 926, 956, 1040, 1054, 1162 |
| PspOMI | GGGCCC | 1 cut(s) | 1160 |
| PspPI | GGNCC | 9 cut(s) | 121, 518, 854, 876, 908, 983, 1106, 1160, 1161 |
| PstI | CTGCAG | 1 cut(s) | 1027 |
| PstNI | CAGNNNCTG | 1 cut(s) | 385 |
| PsuI | RGATCY | 3 cut(s) | 193, 388, 1027 |
| RsaI | GTAC | 1 cut(s) | 1040 |
| RsaNI | GTAC | 1 cut(s) | 1039 |
| RseI | CAYNNNNRTG | 3 cut(s) | 129, 843, 922 |
| SacI | GAGCTC | 1 cut(s) | 893 |
| SaqAI | TTAA | 3 cut(s) | 102, 236, 465 |
| SatI | GCNGC | 6 cut(s) | 380, 682, 785, 833, 879, 1023 |
| Sau3AI | GATC | 4 cut(s) | 193, 229, 388, 1027 |
| Sau96I | GGNCC | 9 cut(s) | 121, 518, 854, 876, 908, 983, 1106, 1160, 1161 |
| SchI | GAGTC | 2 cut(s) | 613, 1130 |
| ScrFI | CCNGG | 6 cut(s) | 386, 750, 804, 852, 1043, 1159 |
| SduI | GDGCHC | 5 cut(s) | 592, 893, 929, 957, 1164 |
| SexAI | ACCWGGT | 1 cut(s) | 748 |
| SfaNI | GCATC | 4 cut(s) | 282, 598, 603, 796 |
| SfcI | CTRYAG | 1 cut(s) | 1023 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 129, 843, 922 |
| SmlI | CTYRAG | 1 cut(s) | 16 |
| SmoI | CTYRAG | 1 cut(s) | 16 |
| Sse9I | AATT | 2 cut(s) | 64, 931 |
| SspMI | CTAG | 1 cut(s) | 357 |
| SstI | GAGCTC | 1 cut(s) | 893 |
| StyD4I | CCNGG | 6 cut(s) | 384, 748, 802, 850, 1041, 1157 |
| StyI | CCWWGG | 3 cut(s) | 306, 453, 508 |
| TaaI | ACNGT | 2 cut(s) | 798, 994 |
| TaiI | ACGT | 1 cut(s) | 157 |
| TaqI | TCGA | 1 cut(s) | 440 |
| TasI | AATT | 2 cut(s) | 64, 931 |
| TauI | GCSGC | 3 cut(s) | 684, 787, 881 |
| Tru1I | TTAA | 3 cut(s) | 102, 236, 465 |
| Tru9I | TTAA | 3 cut(s) | 102, 236, 465 |
| TscAI | CASTG | 3 cut(s) | 547, 736, 997 |
| TseFI | GTSAC | 2 cut(s) | 813, 935 |
| TseI | GCWGC | 3 cut(s) | 379, 832, 1022 |
| Tsp45I | GTSAC | 2 cut(s) | 813, 935 |
| TspDTI | ATGAA | 3 cut(s) | 34, 498, 1004 |
| TspGWI | ACGGA | 2 cut(s) | 239, 593 |
| TspRI | CASTG | 3 cut(s) | 547, 736, 997 |
| VspI | ATTAAT | 1 cut(s) | 465 |
| XceI | RCATGY | 1 cut(s) | 848 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 848, 918 |
| XspI | CTAG | 1 cut(s) | 357 |