ubiquitin-protein transferase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 1 - 52 | 1.4e-08 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 91 |
| AciI | CCGC | 1 cut(s) | 129 |
| AclWI | GGATC | 2 cut(s) | 78, 150 |
| AgsI | TTSAA | 2 cut(s) | 135, 211 |
| AluBI | AGCT | 3 cut(s) | 23, 53, 154 |
| AluI | AGCT | 3 cut(s) | 23, 53, 154 |
| AlwI | GGATC | 2 cut(s) | 78, 150 |
| ApeKI | GCWGC | 1 cut(s) | 50 |
| BbvI | GCAGC | 1 cut(s) | 62 |
| BfaI | CTAG | 2 cut(s) | 233, 261 |
| BisI | GCNGC | 1 cut(s) | 51 |
| BlpI | GCTNAGC | 1 cut(s) | 24 |
| BlsI | GCNGC | 1 cut(s) | 52 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| Bpu10I | CCTNAGC | 1 cut(s) | 150 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 24 |
| Bse1I | ACTGG | 1 cut(s) | 62 |
| BseMII | CTCAG | 2 cut(s) | 15, 141 |
| BseNI | ACTGG | 1 cut(s) | 62 |
| BseRI | GAGGAG | 1 cut(s) | 134 |
| BseXI | GCAGC | 1 cut(s) | 62 |
| BseYI | CCCAGC | 1 cut(s) | 53 |
| Bsp143I | GATC | 3 cut(s) | 40, 70, 142 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 24 |
| BspACI | CCGC | 1 cut(s) | 129 |
| BspCNI | CTCAG | 2 cut(s) | 16, 142 |
| BspHI | TCATGA | 1 cut(s) | 73 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 2 cut(s) | 78, 150 |
| BsrI | ACTGG | 1 cut(s) | 62 |
| BssMI | GATC | 3 cut(s) | 40, 70, 142 |
| BssNAI | GTATAC | 1 cut(s) | 92 |
| Bst1107I | GTATAC | 1 cut(s) | 92 |
| BstDEI | CTNAG | 3 cut(s) | 24, 150, 161 |
| BstKTI | GATC | 3 cut(s) | 43, 73, 145 |
| BstMBI | GATC | 3 cut(s) | 40, 70, 142 |
| BstV1I | GCAGC | 1 cut(s) | 62 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 53 |
| BstZ17I | GTATAC | 1 cut(s) | 92 |
| CciI | TCATGA | 1 cut(s) | 73 |
| CviAII | CATG | 2 cut(s) | 47, 74 |
| CviJI | RGCY | 6 cut(s) | 7, 23, 53, 154, 253, 260 |
| CviKI_1 | RGCY | 6 cut(s) | 7, 23, 53, 154, 253, 260 |
| DdeI | CTNAG | 3 cut(s) | 24, 150, 161 |
| DpnI | GATC | 3 cut(s) | 42, 72, 144 |
| DpnII | GATC | 3 cut(s) | 40, 70, 142 |
| FaeI | CATG | 2 cut(s) | 50, 77 |
| FatI | CATG | 2 cut(s) | 46, 73 |
| FblI | GTMKAC | 1 cut(s) | 91 |
| Fnu4HI | GCNGC | 1 cut(s) | 51 |
| Fsp4HI | GCNGC | 1 cut(s) | 51 |
| FspBI | CTAG | 2 cut(s) | 233, 261 |
| GluI | GCNGC | 1 cut(s) | 51 |
| GsaI | CCCAGC | 1 cut(s) | 57 |
| Hin1II | CATG | 2 cut(s) | 50, 77 |
| HincII | GTYRAC | 1 cut(s) | 126 |
| HindII | GTYRAC | 1 cut(s) | 126 |
| HinfI | GANTC | 1 cut(s) | 171 |
| HpaI | GTTAAC | 1 cut(s) | 126 |
| Hpy166II | GTNNAC | 2 cut(s) | 92, 126 |
| Hpy188I | TCNGA | 1 cut(s) | 112 |
| Hpy188III | TCNNGA | 1 cut(s) | 74 |
| Hpy8I | GTNNAC | 2 cut(s) | 92, 126 |
| HpyAV | CCTTC | 1 cut(s) | 117 |
| HpyCH4V | TGCA | 1 cut(s) | 50 |
| HpyF3I | CTNAG | 3 cut(s) | 24, 150, 161 |
| Hsp92II | CATG | 2 cut(s) | 50, 77 |
| KspAI | GTTAAC | 1 cut(s) | 126 |
| Kzo9I | GATC | 3 cut(s) | 40, 70, 142 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 5 cut(s) | 39, 75, 124, 162, 184 |
| Lsp1109I | GCAGC | 1 cut(s) | 62 |
| MaeI | CTAG | 2 cut(s) | 233, 261 |
| MaeIII | GTNAC | 2 cut(s) | 188, 235 |
| MalI | GATC | 3 cut(s) | 42, 72, 144 |
| MboI | GATC | 3 cut(s) | 40, 70, 142 |
| MluCI | AATT | 2 cut(s) | 30, 178 |
| MnlI | CCTC | 3 cut(s) | 23, 61, 112 |
| MseI | TTAA | 1 cut(s) | 125 |
| MspA1I | CMGCKG | 1 cut(s) | 53 |
| NdeII | GATC | 3 cut(s) | 40, 70, 142 |
| NlaIII | CATG | 2 cut(s) | 50, 77 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 1 cut(s) | 188 |
| PagI | TCATGA | 1 cut(s) | 73 |
| PfeI | GAWTC | 1 cut(s) | 171 |
| PkrI | GCNGC | 1 cut(s) | 52 |
| PspFI | CCCAGC | 1 cut(s) | 53 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PvuII | CAGCTG | 1 cut(s) | 53 |
| SaqAI | TTAA | 1 cut(s) | 125 |
| SatI | GCNGC | 1 cut(s) | 51 |
| Sau3AI | GATC | 3 cut(s) | 40, 70, 142 |
| SetI | ASST | 6 cut(s) | 15, 25, 55, 151, 156, 216 |
| Sse9I | AATT | 2 cut(s) | 30, 178 |
| SsiI | CCGC | 1 cut(s) | 129 |
| SspMI | CTAG | 2 cut(s) | 233, 261 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TasI | AATT | 2 cut(s) | 30, 178 |
| TfiI | GAWTC | 1 cut(s) | 171 |
| Tru1I | TTAA | 1 cut(s) | 125 |
| Tru9I | TTAA | 1 cut(s) | 125 |
| TseFI | GTSAC | 1 cut(s) | 188 |
| TseI | GCWGC | 1 cut(s) | 50 |
| Tsp45I | GTSAC | 1 cut(s) | 188 |
| TspDTI | ATGAA | 1 cut(s) | 90 |
| TspGWI | ACGGA | 1 cut(s) | 26 |
| XmiI | GTMKAC | 1 cut(s) | 91 |
| XspI | CTAG | 2 cut(s) | 233, 261 |