gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 56 |
| AcuI | CTGAAG | 2 cut(s) | 104, 122 |
| AflII | CTTAAG | 1 cut(s) | 80 |
| AflIII | ACRYGT | 1 cut(s) | 320 |
| AgsI | TTSAA | 3 cut(s) | 127, 327, 374 |
| AjnI | CCWGG | 1 cut(s) | 197 |
| AluBI | AGCT | 2 cut(s) | 85, 356 |
| AluI | AGCT | 2 cut(s) | 85, 356 |
| ApeKI | GCWGC | 2 cut(s) | 95, 356 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 36 |
| AsuHPI | GGTGA | 1 cut(s) | 328 |
| BbvI | GCAGC | 2 cut(s) | 82, 343 |
| BciT130I | CCWGG | 1 cut(s) | 199 |
| BfrI | CTTAAG | 1 cut(s) | 80 |
| BisI | GCNGC | 2 cut(s) | 96, 357 |
| BlsI | GCNGC | 2 cut(s) | 97, 358 |
| Bme1390I | CCNGG | 1 cut(s) | 199 |
| BmrFI | CCNGG | 1 cut(s) | 199 |
| BmsI | GCATC | 2 cut(s) | 193, 274 |
| BpuEI | CTTGAG | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 1 cut(s) | 198 |
| Bse1I | ACTGG | 1 cut(s) | 23 |
| BseBI | CCWGG | 1 cut(s) | 199 |
| BseDI | CCNNGG | 1 cut(s) | 198 |
| BseGI | GGATG | 2 cut(s) | 114, 208 |
| BseNI | ACTGG | 1 cut(s) | 23 |
| BseXI | GCAGC | 2 cut(s) | 82, 343 |
| BspTI | CTTAAG | 1 cut(s) | 80 |
| BsrI | ACTGG | 1 cut(s) | 23 |
| BssECI | CCNNGG | 1 cut(s) | 198 |
| Bst2UI | CCWGG | 1 cut(s) | 199 |
| Bst4CI | ACNGT | 2 cut(s) | 217, 298 |
| BstAFI | CTTAAG | 1 cut(s) | 80 |
| BstDEI | CTNAG | 2 cut(s) | 5, 17 |
| BstF5I | GGATG | 2 cut(s) | 114, 208 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 203 |
| BstNI | CCWGG | 1 cut(s) | 199 |
| BstNSI | RCATGY | 1 cut(s) | 324 |
| BstSCI | CCNGG | 1 cut(s) | 197 |
| BstV1I | GCAGC | 2 cut(s) | 82, 343 |
| BtsCI | GGATG | 2 cut(s) | 114, 208 |
| CviAII | CATG | 3 cut(s) | 31, 305, 321 |
| CviJI | RGCY | 4 cut(s) | 74, 85, 197, 356 |
| CviKI_1 | RGCY | 4 cut(s) | 74, 85, 197, 356 |
| DdeI | CTNAG | 2 cut(s) | 5, 17 |
| DraI | TTTAAA | 1 cut(s) | 351 |
| Eco57I | CTGAAG | 2 cut(s) | 104, 122 |
| EcoRII | CCWGG | 1 cut(s) | 197 |
| EcoT22I | ATGCAT | 1 cut(s) | 208 |
| FaeI | CATG | 3 cut(s) | 34, 308, 324 |
| FaiI | YATR | 6 cut(s) | 32, 167, 276, 282, 306, 322 |
| FatI | CATG | 3 cut(s) | 30, 304, 320 |
| FblI | GTMKAC | 1 cut(s) | 56 |
| Fnu4HI | GCNGC | 2 cut(s) | 96, 357 |
| FokI | GGATG | 2 cut(s) | 101, 215 |
| Fsp4HI | GCNGC | 2 cut(s) | 96, 357 |
| GluI | GCNGC | 2 cut(s) | 96, 357 |
| Hin1II | CATG | 3 cut(s) | 34, 308, 324 |
| HphI | GGTGA | 1 cut(s) | 328 |
| Hpy166II | GTNNAC | 1 cut(s) | 57 |
| Hpy188III | TCNNGA | 1 cut(s) | 230 |
| Hpy8I | GTNNAC | 1 cut(s) | 57 |
| HpyAV | CCTTC | 1 cut(s) | 128 |
| HpyCH4III | ACNGT | 2 cut(s) | 217, 298 |
| HpyCH4V | TGCA | 2 cut(s) | 206, 287 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 203 |
| HpyF3I | CTNAG | 2 cut(s) | 5, 17 |
| Hsp92II | CATG | 3 cut(s) | 34, 308, 324 |
| LmnI | GCTCC | 1 cut(s) | 103 |
| LpnPI | CCDG | 5 cut(s) | 36, 49, 125, 184, 211 |
| Lsp1109I | GCAGC | 2 cut(s) | 82, 343 |
| LweI | GCATC | 2 cut(s) | 193, 274 |
| MaeIII | GTNAC | 1 cut(s) | 316 |
| MboII | GAAGA | 2 cut(s) | 128, 251 |
| MfeI | CAATTG | 1 cut(s) | 311 |
| MluCI | AATT | 2 cut(s) | 288, 311 |
| Mph1103I | ATGCAT | 1 cut(s) | 208 |
| MseI | TTAA | 5 cut(s) | 81, 146, 189, 291, 350 |
| MspCI | CTTAAG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 1 cut(s) | 199 |
| MunI | CAATTG | 1 cut(s) | 311 |
| MvaI | CCWGG | 1 cut(s) | 199 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 203 |
| NlaIII | CATG | 3 cut(s) | 34, 308, 324 |
| NmuCI | GTSAC | 1 cut(s) | 316 |
| NsiI | ATGCAT | 1 cut(s) | 208 |
| NspI | RCATGY | 1 cut(s) | 324 |
| PciI | ACATGT | 1 cut(s) | 320 |
| PkrI | GCNGC | 2 cut(s) | 97, 358 |
| PscI | ACATGT | 1 cut(s) | 320 |
| Psp6I | CCWGG | 1 cut(s) | 197 |
| PspGI | CCWGG | 1 cut(s) | 197 |
| SaqAI | TTAA | 5 cut(s) | 81, 146, 189, 291, 350 |
| SatI | GCNGC | 2 cut(s) | 96, 357 |
| ScrFI | CCNGG | 1 cut(s) | 199 |
| SetI | ASST | 4 cut(s) | 87, 176, 189, 358 |
| SfaNI | GCATC | 2 cut(s) | 193, 274 |
| SmlI | CTYRAG | 2 cut(s) | 80, 86 |
| SmoI | CTYRAG | 2 cut(s) | 80, 86 |
| Sse9I | AATT | 2 cut(s) | 288, 311 |
| StyD4I | CCNGG | 1 cut(s) | 197 |
| TaaI | ACNGT | 2 cut(s) | 217, 298 |
| TasI | AATT | 2 cut(s) | 288, 311 |
| Tru1I | TTAA | 5 cut(s) | 81, 146, 189, 291, 350 |
| Tru9I | TTAA | 5 cut(s) | 81, 146, 189, 291, 350 |
| TseFI | GTSAC | 1 cut(s) | 316 |
| TseI | GCWGC | 2 cut(s) | 95, 356 |
| Tsp45I | GTSAC | 1 cut(s) | 316 |
| TspDTI | ATGAA | 1 cut(s) | 252 |
| Vha464I | CTTAAG | 1 cut(s) | 80 |
| XceI | RCATGY | 1 cut(s) | 324 |
| XmiI | GTMKAC | 1 cut(s) | 56 |
| Zsp2I | ATGCAT | 1 cut(s) | 208 |