RPAP1-like, N-terminal
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 220 |
| AciI | CCGC | 3 cut(s) | 132, 218, 224 |
| AclWI | GGATC | 4 cut(s) | 88, 102, 115, 217 |
| AcyI | GRCGYC | 1 cut(s) | 221 |
| AgsI | TTSAA | 1 cut(s) | 75 |
| AjnI | CCWGG | 1 cut(s) | 149 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 52, 84 |
| AluBI | AGCT | 1 cut(s) | 127 |
| AluI | AGCT | 1 cut(s) | 127 |
| Alw21I | GWGCWC | 1 cut(s) | 160 |
| AlwI | GGATC | 4 cut(s) | 88, 102, 115, 217 |
| AspLEI | GCGC | 1 cut(s) | 223 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| BamHI | GGATCC | 1 cut(s) | 107 |
| BanI | GGYRCC | 1 cut(s) | 220 |
| Bbv12I | GWGCWC | 1 cut(s) | 160 |
| BccI | CCATC | 1 cut(s) | 200 |
| BciT130I | CCWGG | 1 cut(s) | 151 |
| BfoI | RGCGCY | 1 cut(s) | 224 |
| BisI | GCNGC | 2 cut(s) | 219, 224 |
| BlsI | GCNGC | 2 cut(s) | 220, 225 |
| Bme1390I | CCNGG | 1 cut(s) | 151 |
| BmiI | GGNNCC | 2 cut(s) | 109, 222 |
| BmrFI | CCNGG | 1 cut(s) | 151 |
| BmrI | ACTGGG | 1 cut(s) | 258 |
| BmsI | GCATC | 1 cut(s) | 14 |
| BmuI | ACTGGG | 1 cut(s) | 258 |
| BpmI | CTGGAG | 2 cut(s) | 15, 172 |
| BsaHI | GRCGYC | 1 cut(s) | 221 |
| BsaJI | CCNNGG | 1 cut(s) | 111 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 40, 70 |
| Bse1I | ACTGG | 2 cut(s) | 32, 264 |
| BseBI | CCWGG | 1 cut(s) | 151 |
| BseDI | CCNNGG | 1 cut(s) | 111 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseNI | ACTGG | 2 cut(s) | 32, 264 |
| BshNI | GGYRCC | 1 cut(s) | 220 |
| BsiHKAI | GWGCWC | 1 cut(s) | 160 |
| Bsp1286I | GDGCHC | 1 cut(s) | 160 |
| Bsp143I | GATC | 4 cut(s) | 93, 107, 171, 209 |
| Bsp19I | CCATGG | 1 cut(s) | 111 |
| BspACI | CCGC | 3 cut(s) | 132, 218, 224 |
| BspHI | TCATGA | 1 cut(s) | 90 |
| BspLI | GGNNCC | 2 cut(s) | 109, 222 |
| BspPI | GGATC | 4 cut(s) | 88, 102, 115, 217 |
| BspT107I | GGYRCC | 1 cut(s) | 220 |
| BsrI | ACTGG | 2 cut(s) | 32, 264 |
| BssECI | CCNNGG | 1 cut(s) | 111 |
| BssMI | GATC | 4 cut(s) | 93, 107, 171, 209 |
| BssNI | GRCGYC | 1 cut(s) | 221 |
| BssT1I | CCWWGG | 1 cut(s) | 111 |
| Bst2UI | CCWGG | 1 cut(s) | 151 |
| Bst6I | CTCTTC | 1 cut(s) | 250 |
| BstACI | GRCGYC | 1 cut(s) | 221 |
| BstDEI | CTNAG | 1 cut(s) | 282 |
| BstDSI | CCRYGG | 1 cut(s) | 111 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstH2I | RGCGCY | 1 cut(s) | 224 |
| BstHHI | GCGC | 1 cut(s) | 223 |
| BstKTI | GATC | 4 cut(s) | 96, 110, 174, 212 |
| BstMBI | GATC | 4 cut(s) | 93, 107, 171, 209 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 164 |
| BstNI | CCWGG | 1 cut(s) | 151 |
| BstSCI | CCNGG | 1 cut(s) | 149 |
| BstX2I | RGATCY | 2 cut(s) | 107, 209 |
| BstYI | RGATCY | 2 cut(s) | 107, 209 |
| BtgI | CCRYGG | 1 cut(s) | 111 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| CciI | TCATGA | 1 cut(s) | 90 |
| CfoI | GCGC | 1 cut(s) | 223 |
| CviAII | CATG | 2 cut(s) | 91, 112 |
| CviJI | RGCY | 1 cut(s) | 127 |
| CviKI_1 | RGCY | 1 cut(s) | 127 |
| DdeI | CTNAG | 1 cut(s) | 282 |
| DinI | GGCGCC | 1 cut(s) | 222 |
| DpnI | GATC | 4 cut(s) | 95, 109, 173, 211 |
| DpnII | GATC | 4 cut(s) | 93, 107, 171, 209 |
| Eam1104I | CTCTTC | 1 cut(s) | 250 |
| EarI | CTCTTC | 1 cut(s) | 250 |
| Eco130I | CCWWGG | 1 cut(s) | 111 |
| EcoRII | CCWGG | 1 cut(s) | 149 |
| EcoT14I | CCWWGG | 1 cut(s) | 111 |
| EgeI | GGCGCC | 1 cut(s) | 222 |
| EheI | GGCGCC | 1 cut(s) | 222 |
| ErhI | CCWWGG | 1 cut(s) | 111 |
| FaeI | CATG | 2 cut(s) | 94, 115 |
| FaiI | YATR | 4 cut(s) | 92, 113, 215, 276 |
| FatI | CATG | 2 cut(s) | 90, 111 |
| Fnu4HI | GCNGC | 2 cut(s) | 219, 224 |
| FokI | GGATG | 1 cut(s) | 24 |
| Fsp4HI | GCNGC | 2 cut(s) | 219, 224 |
| GlaI | GCGC | 1 cut(s) | 222 |
| GluI | GCNGC | 2 cut(s) | 219, 224 |
| GsuI | CTGGAG | 2 cut(s) | 15, 172 |
| HaeII | RGCGCY | 1 cut(s) | 224 |
| HhaI | GCGC | 1 cut(s) | 223 |
| Hin1I | GRCGYC | 1 cut(s) | 221 |
| Hin1II | CATG | 2 cut(s) | 94, 115 |
| Hin6I | GCGC | 1 cut(s) | 221 |
| HinP1I | GCGC | 1 cut(s) | 221 |
| HinfI | GANTC | 2 cut(s) | 20, 242 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy188I | TCNGA | 1 cut(s) | 107 |
| Hpy188III | TCNNGA | 3 cut(s) | 91, 239, 269 |
| HpyAV | CCTTC | 1 cut(s) | 53 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 164 |
| HpyF3I | CTNAG | 1 cut(s) | 282 |
| Hsp92I | GRCGYC | 1 cut(s) | 221 |
| Hsp92II | CATG | 2 cut(s) | 94, 115 |
| HspAI | GCGC | 1 cut(s) | 221 |
| KasI | GGCGCC | 1 cut(s) | 220 |
| Kzo9I | GATC | 4 cut(s) | 93, 107, 171, 209 |
| LpnPI | CCDG | 6 cut(s) | 45, 136, 158, 163, 180, 277 |
| LweI | GCATC | 1 cut(s) | 14 |
| MaeIII | GTNAC | 1 cut(s) | 197 |
| MalI | GATC | 4 cut(s) | 95, 109, 173, 211 |
| MboI | GATC | 4 cut(s) | 93, 107, 171, 209 |
| MboII | GAAGA | 3 cut(s) | 63, 227, 237 |
| MflI | RGATCY | 2 cut(s) | 107, 209 |
| MhlI | GDGCHC | 1 cut(s) | 160 |
| MluCI | AATT | 3 cut(s) | 67, 75, 139 |
| Mly113I | GGCGCC | 1 cut(s) | 221 |
| MlyI | GAGTC | 1 cut(s) | 236 |
| MnlI | CCTC | 4 cut(s) | 37, 64, 94, 237 |
| MslI | CAYNNNNRTG | 1 cut(s) | 204 |
| MspR9I | CCNGG | 1 cut(s) | 151 |
| MvaI | CCWGG | 1 cut(s) | 151 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 164 |
| NarI | GGCGCC | 1 cut(s) | 221 |
| NcoI | CCATGG | 1 cut(s) | 111 |
| NdeII | GATC | 4 cut(s) | 93, 107, 171, 209 |
| NlaIII | CATG | 2 cut(s) | 94, 115 |
| NlaIV | GGNNCC | 2 cut(s) | 109, 222 |
| NmuCI | GTSAC | 1 cut(s) | 197 |
| PagI | TCATGA | 1 cut(s) | 90 |
| PfeI | GAWTC | 1 cut(s) | 20 |
| PkrI | GCNGC | 2 cut(s) | 220, 225 |
| PleI | GAGTC | 1 cut(s) | 236 |
| PluTI | GGCGCC | 1 cut(s) | 224 |
| PpsI | GAGTC | 1 cut(s) | 236 |
| Psp6I | CCWGG | 1 cut(s) | 149 |
| PspGI | CCWGG | 1 cut(s) | 149 |
| PspN4I | GGNNCC | 2 cut(s) | 109, 222 |
| PsuI | RGATCY | 2 cut(s) | 107, 209 |
| RseI | CAYNNNNRTG | 1 cut(s) | 204 |
| SatI | GCNGC | 2 cut(s) | 219, 224 |
| Sau3AI | GATC | 4 cut(s) | 93, 107, 171, 209 |
| SchI | GAGTC | 1 cut(s) | 236 |
| ScrFI | CCNGG | 1 cut(s) | 151 |
| SduI | GDGCHC | 1 cut(s) | 160 |
| SetI | ASST | 5 cut(s) | 86, 129, 147, 152, 192 |
| SfaNI | GCATC | 1 cut(s) | 14 |
| SfoI | GGCGCC | 1 cut(s) | 222 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 204 |
| Sse9I | AATT | 3 cut(s) | 67, 75, 139 |
| SsiI | CCGC | 3 cut(s) | 132, 218, 224 |
| SspDI | GGCGCC | 1 cut(s) | 220 |
| StyD4I | CCNGG | 1 cut(s) | 149 |
| StyI | CCWWGG | 1 cut(s) | 111 |
| TaqI | TCGA | 1 cut(s) | 248 |
| TasI | AATT | 3 cut(s) | 67, 75, 139 |
| TauI | GCSGC | 2 cut(s) | 221, 226 |
| TfiI | GAWTC | 1 cut(s) | 20 |
| TseFI | GTSAC | 1 cut(s) | 197 |
| Tsp45I | GTSAC | 1 cut(s) | 197 |
| TspDTI | ATGAA | 1 cut(s) | 26 |
| TspGWI | ACGGA | 1 cut(s) | 32 |